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Spg035700 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGATGTTTTGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTGGTATGGTTGGAAAACTTATTCAATTATCTACAACTTTCATGAAGAATTCGTGAGCCAAACATGACTTGAAGTAGGTTTACTTTCAGGAGGAAGATAAAGGGTAACAGAGAAGCTCGAATCTGTGTTGTCTGATTTCGGGGCATTTCTGGACAAATTGGTTGGAAATCTCGTTTTCATTTCTTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTGTATTTCATTAATTTTGTTTCAGTATTGAGGAAGTTGTGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAAAAGTAGAATGTGAATGTGATTCTTAATCCAATTGTTTAAAAATTCATGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTGGTTATTTGACAGGCCAAGAGGAAGTAGGTCGAGTCAAAAAACATTGGAACTAGATAAGACTGTGAGTGACAAAATGAATTTCGAAAATGTTCTTAAACGGTTGTTCATGATTATATGTTTTACATGTTTTCCTATGAATGATACATGGTTTTTATGAACGGTTTCAAGCATGAGTTTTGAGCTCAGATTTTCTAATGAGGTTTATATACGAGCACGTGTCTAATGACTTTATGAAAAGTAGCTGAAACGATATCTTTTAAAGCAAAGTATGGATTAGCAAGTACTTCTAAATGATTTTCGGTTTTCCACGAGCAAGCTGAGTAAGCTTAAGTTTTTCGAAAGATAACGATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTAAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTATGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAACGTTTGATATACTTGATATGCCTTGCTAGATTCTTAATGACGGACTTGCGAAATGTTTTAGAAAGCCTTTATCCTTACATGTTTATGTTAAACGCTTTGACTGAGCATATTTATACGTTTAAAGGTTTATCACGTGTTTTGACTTCCAGATTCAGAGCTTTAAAATTAGTCACTCACTGGGCTTCGTAGCTCATTCTTTCAAAATGTTTTCCACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTAAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTCATATTGTAAATGTTTTGTAAGGGTTGTATAATATCGTCCTAGAGGTTGTGGATGTATAACCCTAGTTGTATATGTTTTGGTCGTGATATCTATATCAGGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTTCCGTGGATTCCGCTGTGTGGTGTTTCATATAGAATGTTTTATATCTATGATTAGTATGTTTATCAGGTTCAACGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACAAATATGAATTTGATTCATATTAAATTTATAGGATATAAGAGAATTGGAAGGAGTTCCAATTATAATATGAATTTGATTCATATTATAGAATTAATTAATTGAAGGCGAGAAATTAAATATATGATATTTAATTGGGTAATTAATTAATTAACTAATAGAAGGTCTGAAATTAAATATATGATATTTAATTGGTAATTAATTAATTTAAAGAATTAATTAATTGGAAATTAATCAATTATGGAAATGATTAATCACTTATGGAAGTAATTAATCATTTATGGAAATAATTTAATCACTTATGGAAGTGATCAATCATTTATGGAAAAGATTAATCAATTATGGAATTGATTCGTTATGGAATTAATTAATTATGGAAAAGATTAAATCAGTTATGGAAATAATTGATTTTAAATTAATATTTTATTCATGACTTTTCTCCTATAAATAGAACACTAACCCTAGGGGTTAGGAAACACAACATATGGCCACCATAAGGCCCTCTCATATTCTCTCAACTCAAGAACTCTAGGGAGAATTTTCTCTCTAGAGTTTTTCCCATTCAAGATTAGGTAGTCCCACAACTACGTTCTTAATCTCAGAGTTATAGCGGGGAAGATCAAATGGTGGTGTTCTTCGTTGTTGCAGAGCAATCAAGAATCATTCTTGATTTTCAGAGACGTTAA ATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGCCAAGAGGAAGTAGGTCGAGTCAAAAAACATTGGAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTAAAAGTTCTAGATCAAGCTCCAGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTCAACGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGATCAAATGGTGGTGTTCTTCGTTGTTGCAGAGCAATCAAGAATCATTCTTGATTTTCAGAGACGTTAA ATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGCCAAGAGGAAGTAGGTCGAGTCAAAAAACATTGGAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTAAAAGTTCTAGATCAAGCTCCAGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTCAACGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGATCAAATGGTGGTGTTCTTCGTTGTTGCAGAGCAATCAAGAATCATTCTTGATTTTCAGAGACGTTAA MENRAQDFRAKQEDLWPRGSRSSQKTLELDKTVEIELPVPDTLPTSAKSSRSSSSYFPNQVMSGLHHVYVERFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGDQMVVFFVVAEQSRIILDFQRR Homology
BLAST of Spg035700 vs. NCBI nr
Match: KAA0064296.1 (putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01032.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 120.2 bits (300), Expect = 1.3e-23 Identity = 70/111 (63.06%), Postives = 76/111 (68.47%), Query Frame = 0
BLAST of Spg035700 vs. NCBI nr
Match: TYK01041.1 (uncharacterized protein E5676_scaffold264G00470 [Cucumis melo var. makuwa]) HSP 1 Score: 117.5 bits (293), Expect = 8.6e-23 Identity = 60/79 (75.95%), Postives = 63/79 (79.75%), Query Frame = 0
BLAST of Spg035700 vs. NCBI nr
Match: KAA0051980.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK04577.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 115.9 bits (289), Expect = 2.5e-22 Identity = 72/125 (57.60%), Postives = 78/125 (62.40%), Query Frame = 0
BLAST of Spg035700 vs. NCBI nr
Match: TYK11835.1 (uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa]) HSP 1 Score: 112.8 bits (281), Expect = 2.1e-21 Identity = 71/122 (58.20%), Postives = 75/122 (61.48%), Query Frame = 0
BLAST of Spg035700 vs. NCBI nr
Match: KAA0062409.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 110.9 bits (276), Expect = 8.0e-21 Identity = 69/125 (55.20%), Postives = 76/125 (60.80%), Query Frame = 0
BLAST of Spg035700 vs. ExPASy TrEMBL
Match: A0A5A7VD33 (Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00370 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 6.4e-24 Identity = 70/111 (63.06%), Postives = 76/111 (68.47%), Query Frame = 0
BLAST of Spg035700 vs. ExPASy TrEMBL
Match: A0A5D3BMJ4 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00470 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 4.1e-23 Identity = 60/79 (75.95%), Postives = 63/79 (79.75%), Query Frame = 0
BLAST of Spg035700 vs. ExPASy TrEMBL
Match: A0A5A7U9X4 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002130 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 1.2e-22 Identity = 72/125 (57.60%), Postives = 78/125 (62.40%), Query Frame = 0
BLAST of Spg035700 vs. ExPASy TrEMBL
Match: A0A5D3CJX3 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00520 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 1.0e-21 Identity = 71/122 (58.20%), Postives = 75/122 (61.48%), Query Frame = 0
BLAST of Spg035700 vs. ExPASy TrEMBL
Match: A0A5A7V9N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G002110 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 3.9e-21 Identity = 69/125 (55.20%), Postives = 76/125 (60.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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