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Spg035666 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGAGATATTGACCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTTACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACATTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAATGTTTGATGAACTTGATATGTCTTGCTAGATTTTTTTAATGACGAGCCTGCGATGTTTTTAAGAAAGCTTTTATCGTTGCACGTTTATGTTTAACGCCTTGGTTGAGCATCTTCATACGTTTAAAGTTTTATCACGTGTTCTGATTTCCGAATGTACAGTTTTAAAGTTAGTCACTCACTGGGCTTTGTAGCTCATTCTTTCAAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCTTGATACACTGCCAACGTCTGCTGAAAGTTTCAGATCAAGCTCCAGTACGTGGATGGAGTTGTATATTGAGTCCGTCTTGAAGGATTGGAATTCCGTAATTCCGTAAAGCGGAAGCGTGATTGGGACCGATTCGTAATTAATTTTGTTTAATCTAAAATACCAATACATTGGCAATAATATTAGAACTATTCTAAATATATATTAAGGCTAAGCATACAAAAATATTAGATCTAAATCTAATTTATAAAGTAACAAATTACTTACTCTCGTTGACGACTCAGATTAAATTCACCAACTGCTTGTGAATTAATCACGAACTAGTGCGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGAGGCAGGAGACTTATGGGAGCCTTTGGGAGAATTCTCTGAGAGTAGGAGAATGAATGGGATCCCTTTCACCCCACCCCAGGGGTCCTATATATAGTAAAGGCCAAGACCTTTTTCCTAATAGGAAAAGGGAGACCTTTTCCTAATAGGAAAAGGGAGACCTTTTCCTAATAGGAAAAGGGAGACCTTTTCCTAATAGGAAAAAGTCTCTAATTTTAATAAATAATTAATTAATTCCATAATTAATTAATGTCCCAATTAAATATCATATATTTAATCTTAGGGATTTTATTAAAATTAAAATTAATATGAATCCAATTCATATTAAATTTATTTGAACTCTTTCAAATATTTTCTTTCCTAATAGGAAAAGGTCTCTAATTTTAATAAATAATTAATTAATTTACCCAATTAAATATCATATATTTAATCTTAGGGATTTTATTAAAATTAAAATTAATATGAATCCAATTCATATTAAATTTATTTGAACTCTTTCAAATACTTTCTCTCAAGAATTAATTTTTTTTTAAATTAATTCAAAAATTATATTATAAAGTTTCATAAACTTTATATTATAATGCATCAATATACATTATACGATTCCCCAAATAAATTGAACACTTTCAATTTACAATTTATACTTAATTGCCTCAAGTCTCTTTACGAGCTACCAGTGGACCTAATGGACCTACAGATCAAAAGCTCCAACGATACGAGACTAATTGGCCAAACTCATTGACCAAGTTTAGTCAACATTCGTTAACTGTGGGTCACTCCACTAAAGACCCACAGCTGCACTCTTCTCACTATAGAATATTTCTGTGTCCACGGATATCGACCAAGCAGTAAGTCAATCTTTCACGTGTGTTCGTAACACCAGCTGGGTCAAATTACCGTTTTACCCCTGGGTTACCTCTGGTTCCTTAAGTACCACTAATTCCTCTAATGAACAAGTTGTTTAGGGTCCAACCACTAAACAGGAGTTCCTCTCAGGCTAGGAGAGGACGACGCGCCTTTGTTCAAGCCCTAGAATCAGCCCTTAAGGGAACACACATCTACTTACCCCAATAGGGGAAGGAGTGAATTCCATCTTGTACTGTTATGTTCCCAGCCCCCATTCGGTCTTGCCCCTGAAATGGTAGGCTTATTGAGTCGGCGAACTGGCCACTCTCACCCATACAAATCTAAGGACAGTCCCTCCTGGAAGGGGTTCATAACAGACTCAGGATTGAGATTGAGTTACCTAGGTCATCCTATTGAAATAGAAACCTAAACTAGTTAACGGCGTTACATCTAGTGGTTACTATTTCTCGGTCCGGTCTTATGCAAACTCATTGCATAGGATACCCCCATCCGCATGTCTCCTACATGGATGCTTTGGATCATTGCATCTGTATCGAATACAAGGTGGGCCGTATCACATAGTGTCACCAGGATAAGGTACCCAACCTTATCCCTATACTATAGACCATTTAGGTTGTTACTTGGACACTGATCCCCGTATGTCCCCACATACTAGTCCAAGTTTCATTTAAACAACCTTGGATCTTAGTTTATTGGATTTAGGGTTTATTAATGCAAACTCGATTATTCAATAACCAAATTACTGAATTACTCAAATAACACTTTATTGAGATCGATTAATTTGTTTCATTTACTATCTACGAGTTTTAGGGCATAAAACCCAACACGTCTATATTGTAAATGTTTTGTAAGGATTGGACAATTTAGTCCTAGAGGTCGTGGTTGTATAAACCCCATTTGCATATGTTTTTGGTTGTGAAATCTATATCAGGTTATTCTCCAAATCGAGTTATGTTAGGGCTGCACCTCGTGTATATTAGAAGGTTTTCAGGGATTCCGCTGTGTTGTGTTTCATGTGGAATGTTTTATATCTAAGATTAGTATGTTTATCAGGTTCTACGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCTGGGAGGGGGTGTGACACCCAGCCCCCCACTCGGTCTTGTTGATGCACGATTTGCTTACCGCAAATGTACGGGCCAAGTTATAATATAG ATGACTGAGATATTGACCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCTTGATACACTGCCAACGTCTGCTGAAAGTTTCAGATCAAGCTCCAGTACGTGGATGGAGTTGTATATTGAGTCCGTCTTGAAGGATTGGAATTCCTGCGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGAGGCAGGAGACTTATGGGAGCCTTTGGGAGAATTCTCTGAGAGTTCTACGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCTGGGAGGGGGTGTGACACCCAGCCCCCCACTCGGTCTTGTTGATGCACGATTTGCTTACCGCAAATGTACGGGCCAAGTTATAATATAG ATGACTGAGATATTGACCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCTTGATACACTGCCAACGTCTGCTGAAAGTTTCAGATCAAGCTCCAGTACGTGGATGGAGTTGTATATTGAGTCCGTCTTGAAGGATTGGAATTCCTGCGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGAGGCAGGAGACTTATGGGAGCCTTTGGGAGAATTCTCTGAGAGTTCTACGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCTGGGAGGGGGTGTGACACCCAGCCCCCCACTCGGTCTTGTTGATGCACGATTTGCTTACCGCAAATGTACGGGCCAAGTTATAATATAG MTEILTPRLYGTVCTQVEIELPVLDTLPTSAESFRSSSSTWMELYIESVLKDWNSCEHHHYGYTGMTLRLLEAGDLWEPLGEFSESSTFQEGQRVSLEEDDVRWLHAIFRTKLAGGLGGGVTPSPPLGLVDARFAYRKCTGQVII Homology
BLAST of Spg035666 vs. NCBI nr
Match: TYK27998.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 3.0e-16 Identity = 62/142 (43.66%), Postives = 71/142 (50.00%), Query Frame = 0
BLAST of Spg035666 vs. NCBI nr
Match: KAA0066851.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 3.0e-16 Identity = 62/142 (43.66%), Postives = 71/142 (50.00%), Query Frame = 0
BLAST of Spg035666 vs. NCBI nr
Match: TYK08952.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 93.2 bits (230), Expect = 2.0e-15 Identity = 63/141 (44.68%), Postives = 74/141 (52.48%), Query Frame = 0
BLAST of Spg035666 vs. NCBI nr
Match: KAA0062407.1 (uncharacterized protein E6C27_scaffold154G002090 [Cucumis melo var. makuwa] >TYK26574.1 uncharacterized protein E5676_scaffold313G001830 [Cucumis melo var. makuwa]) HSP 1 Score: 85.1 bits (209), Expect = 5.4e-13 Identity = 55/122 (45.08%), Postives = 67/122 (54.92%), Query Frame = 0
BLAST of Spg035666 vs. NCBI nr
Match: TYK25935.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 84.7 bits (208), Expect = 7.0e-13 Identity = 52/108 (48.15%), Postives = 61/108 (56.48%), Query Frame = 0
BLAST of Spg035666 vs. ExPASy TrEMBL
Match: A0A5D3DX39 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002140 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16 Identity = 62/142 (43.66%), Postives = 71/142 (50.00%), Query Frame = 0
BLAST of Spg035666 vs. ExPASy TrEMBL
Match: A0A5A7VMG9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G002220 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16 Identity = 62/142 (43.66%), Postives = 71/142 (50.00%), Query Frame = 0
BLAST of Spg035666 vs. ExPASy TrEMBL
Match: A0A5D3CCC7 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00430 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 9.6e-16 Identity = 63/141 (44.68%), Postives = 74/141 (52.48%), Query Frame = 0
BLAST of Spg035666 vs. ExPASy TrEMBL
Match: A0A5A7V638 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001830 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 2.6e-13 Identity = 55/122 (45.08%), Postives = 67/122 (54.92%), Query Frame = 0
BLAST of Spg035666 vs. ExPASy TrEMBL
Match: A0A5A7T9P7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1164G00060 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 3.4e-13 Identity = 52/108 (48.15%), Postives = 61/108 (56.48%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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