Spg035621 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg035621
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold3: 3179319 .. 3181168 (-)
RNA-Seq Expression	Spg035621
Synteny	Spg035621

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCCTAGGGTTTTTAGGAATTCAGAGGTGTTTCGGGACGAACCAGGTGGAACCGGGGCGGCCAGAGGCAGCAGGGACCGAACGGAGTCGGAGAGACTCGGCCCGCGAGGCCGACCATGGGCCTCGGCCTCGGCCCGGCATTGCCATGGGGTCAGGCCAAAAGCCCGATCCCTTCGGCCTTGGCCCGACCCCTTGGCCCGTTTCACCTCCAGGGTCCATCCTTCGGTCCTATTTCTGGGCTCGCGTCGGGTTGTCTTCGTCAGCTCCTTGTACATCAGAGTGGTCCAAAATTACCTATAACATTAAGCCCCCACTCTCGAATTGGGATTCAGGTGTGACTTACTACTATTGGTCGAGTCTTCTTAAGCTCGATTTAAGAGTATGAATGAATTCCTTGTTACCAGAAATGGGCGGAGGGCCTGTGTGACTGGCCTAGCCTCGACCTCGGCCTCTGGATGAGGCCGAGCATACCATTCTTATAATTTTGCTTAGGGGGCGTTGCCCTCGAACCCCCACCAAGCGCTTCGCCCGTTCTTGGTCATTTGGAGTGCTTCATTTGAGATTCAGGGCTTATCCACAAGTAAAATGTAGGAAAAATAGAAGATATTACGATCCTGTATCGAAAAGTTAATTTCTGCAAAAGAAAAATGAGGGAAGAAGCTAGGATCGGCCTCGGCCTCATGCCCCTGTTAGCCTAAAACTTAGCTCCCTGCATTCATTTGTTAGTCCTTGTAGGAAAATAATGGAATAATAGGCTTGAGCATGTAATCATTGGTTAGACATGCTAAGCTAGTGTGCCTTTTGTTTAATAGGGAGTGCATATCCCCTGTTACTTGCTTTTTGTTTAATAGGGAGTACATATCCCCTTTGTTGCCCCCTTACCCAAGTAAAGTTTTATTCAAAACATAAAACATAGTTAAGTAAAGAGGAGAATACCTTTAAAGGTTGTGCTTGGCCTCTGCAAGAGGTGCTCGATTTCGGCCTCAGCCAGGTGAGCTTGACTCAGATGAAGTGTATGGGCGAGGCGAGGTAGACTCAGTAGTCCAGGCTCGCGTATCGTGAGGGGCTCAAGCCAGATGAAGTGAGGTAGACTCGGTGGTCCAGGCTCACATAATCTCGATTCTGGATGAGGAGAGGTAGACTCGGTAGTCCAAGCTCGCGAGAAGTGATAGGCTCGAGCCAGATGAGATGAGGTAGACTCGGTGGTCCAGGCTCACATAGTCTCAATCTGGATGAGGTGAGGTAGACTCGGTAGTCCAAGCTCGCGAGAAGTGATGGGCTCAAGCTAGATGAGGTGAGGTAGTCTCGGTGGTCCAGACTCACATAGTCTCAATCTGGGTGAGGCGAGGTAGACTCGGTAGTCCAGGCTCGCATAATGTGATGTGAGGTAGACCTGGGGGCGCAGGCTCCCATATAGGCGTGGGCTCTATAGGCTCGCATATAGGCGTGGGCTCTATAGGCTCGCATGTAAGCGTGGTCTCTATAGGATCGTATGTAGGCGTGGGCTCTAAGCTCAAGAGTTTAGGCTCGCATGTACGCGTGGGCACTAAGCTGAAAAGCTTAGGCTCGCATGTAGGCGTGGGCTCTATAGGCGCACATGTAAGTGTGGCCTCTATAGGCTCGCATGTAGGCGTGGGCACTAAACTGAGAAGCTTAGGCTCGCATGGAGGCGTGGGCACTAAGCTGAAAAGCTTAGGCTCGAATGTAGGCGTGGGCGCTAAGCTCGAAGACTTAGGCTTGCAGGTGTTCAATCTCGCATGCAATAACAGGATTGGCCTTGGTCATAACCATGGCCATGGTCGGCCTCGGCCTCTGGCATGGCTCGGGTCGACTTCGGCCTCGGCCTAG

mRNA sequence

ATGCTCCTAGGGTTTTTAGGAATTCAGAGGTGTTTCGGGACGAACCAGGTGGAACCGGGGCGGCCAGAGGCAGCAGGGACCGAACGGAGTCGGAGAGACTCGGCCCGCGAGGCCGACCATGGGCCTCGGCCTCGGCCCGGCATTGCCATGGGGTCAGGCCAAAAGCCCGATCCCTTCGGCCTTGGCCCGACCCCTTGGCCCGTTTCACCTCCAGGGTCCATCCTTCGGTCCTATTTCTGGGCTCGCGTCGGGTTGTCTTCGTCAGCTCCTTGTACATCAGAGTGGTCCAAAATTACCTATAACATTAAGCCCCCACTCTCGAATTGGGATTCAGGTGTGACTTACTACTATTGGTCGAGTCTTCTTAAGCTCGATTTAAGAGGGGCGTTGCCCTCGAACCCCCACCAAGCGCTTCGCCCGTTCTTGGTCATTTGGAGTGCTTCATTTGAGATTCAGGGCTTATCCACAAGTAAAATGTTGTGCTTGGCCTCTGCAAGAGGTGCTCGATTTCGGCCTCAGCCAGGTGAGCTTGACTCAGATGAAGTGTATGGGCGAGGCGAGTCCAAGCTCGCGAGAAGTGATGGGCTCAAGCTAGATGAGACCTGGGGGCGCAGGCTCCCATATAGGCGTGGGCTCTATAGGCTCGCATATAGGCGTGGGCTCTATAGGCTCGCATGCGTGGGCTCTATAGGCGCACATGTAAGTGTGGCCTCTATAGGCTCGCATGTAGGCGTGGGCACTAAACTGAGAAGCTTAGGCTCGCATGGAGGCGTGGGCACTAAGCTGAAAAGCTTAGGCTCGAATGTAGGCGTGGGCGCTAAGCTCGAAGACTTAGGCTTGCAGGTGTTCAATCTCGCATGCAATAACAGGATTGGCCTTGGTCATAACCATGGCCATGGTCGGCCTCGGCCTCTGGCATGGCTCGGGTCGACTTCGGCCTCGGCCTAG

Coding sequence (CDS)

ATGCTCCTAGGGTTTTTAGGAATTCAGAGGTGTTTCGGGACGAACCAGGTGGAACCGGGGCGGCCAGAGGCAGCAGGGACCGAACGGAGTCGGAGAGACTCGGCCCGCGAGGCCGACCATGGGCCTCGGCCTCGGCCCGGCATTGCCATGGGGTCAGGCCAAAAGCCCGATCCCTTCGGCCTTGGCCCGACCCCTTGGCCCGTTTCACCTCCAGGGTCCATCCTTCGGTCCTATTTCTGGGCTCGCGTCGGGTTGTCTTCGTCAGCTCCTTGTACATCAGAGTGGTCCAAAATTACCTATAACATTAAGCCCCCACTCTCGAATTGGGATTCAGGTGTGACTTACTACTATTGGTCGAGTCTTCTTAAGCTCGATTTAAGAGGGGCGTTGCCCTCGAACCCCCACCAAGCGCTTCGCCCGTTCTTGGTCATTTGGAGTGCTTCATTTGAGATTCAGGGCTTATCCACAAGTAAAATGTTGTGCTTGGCCTCTGCAAGAGGTGCTCGATTTCGGCCTCAGCCAGGTGAGCTTGACTCAGATGAAGTGTATGGGCGAGGCGAGTCCAAGCTCGCGAGAAGTGATGGGCTCAAGCTAGATGAGACCTGGGGGCGCAGGCTCCCATATAGGCGTGGGCTCTATAGGCTCGCATATAGGCGTGGGCTCTATAGGCTCGCATGCGTGGGCTCTATAGGCGCACATGTAAGTGTGGCCTCTATAGGCTCGCATGTAGGCGTGGGCACTAAACTGAGAAGCTTAGGCTCGCATGGAGGCGTGGGCACTAAGCTGAAAAGCTTAGGCTCGAATGTAGGCGTGGGCGCTAAGCTCGAAGACTTAGGCTTGCAGGTGTTCAATCTCGCATGCAATAACAGGATTGGCCTTGGTCATAACCATGGCCATGGTCGGCCTCGGCCTCTGGCATGGCTCGGGTCGACTTCGGCCTCGGCCTAG

Protein sequence

MLLGFLGIQRCFGTNQVEPGRPEAAGTERSRRDSAREADHGPRPRPGIAMGSGQKPDPFGLGPTPWPVSPPGSILRSYFWARVGLSSSAPCTSEWSKITYNIKPPLSNWDSGVTYYYWSSLLKLDLRGALPSNPHQALRPFLVIWSASFEIQGLSTSKMLCLASARGARFRPQPGELDSDEVYGRGESKLARSDGLKLDETWGRRLPYRRGLYRLAYRRGLYRLACVGSIGAHVSVASIGSHVGVGTKLRSLGSHGGVGTKLKSLGSNVGVGAKLEDLGLQVFNLACNNRIGLGHNHGHGRPRPLAWLGSTSASA

Homology

The following BLAST results are available for this feature:

BLAST of Spg035621 vs.


Match Name	E-value	Identity	Description

BLAST of Spg035621 vs.


Match Name	E-value	Identity	Description

BLAST of Spg035621 vs.


Match Name	E-value	Identity	Description

BLAST of Spg035621 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..43

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg035621.1	Spg035621.1	mRNA