Spg034748 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg034748
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	scaffold7: 45120493 .. 45125552 (-)
RNA-Seq Expression	Spg034748
Synteny	Spg034748

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCCTTGCTGATCCAACAAAAGGTAGCTAAAGCACTTCTCGATCCAGGTCAGCTTCCTCCAACTTTGTCTGAAGATGATAAACAAGAAATGCGTGAGATTGCTCACAGCTCGATTATCTTGCATCTTTTTGGGCTTTGGAGACAGGAGATGAAAGCCTTGCTGATCCAACAAAAGGTAGATAAAGCACTTCTCGATCCAGGTCAGCTTCCTCCAACTTTGTCTGAAGATGATAAATAAGAAATGCGTGAGATTGCTCACAGCTCGATTATCTTGCATCTTTTTTATAATGTCCTTAGAAGGGTTGGTAAAATTGAAAAAGTAGATGAACTTTGGGCTAAATTGGAAGAATTGTATATGCCTAAATCATTGTCTAGTAAAATCTACTTAAAAGAACGCTTCTTTGTCTTCAAAATGGACCCCTCTAAGAACCTTGATGAGAATCTAGATAATTTTAATACTGTGTGTACAGAACTTGCTAACTCAGGGGAAGAGGTAAAGGGGGTTGACCAAGCGGTAATCCTACTAAACTTCTTACATGTATCATATAATGAAATAAAAGCTGCGCTCAAATACGATAGAGATAACCTTACAGTCGATATGGTTCTTGATGCTTTAAAGAAAAAAGAACTTGAATTTAAAATTGAAAAGAAGGATGGTGATGTCTTATTTGGAAAAGGTAAACAAACAAACTCACATAACTCAAGGGGAAGGGGTTTTAGAGGTAGGGGCAGAGGCTTTCAATCTAGAGGTCAAACTCCCAAAATCCCCAACAAAAGGATCATAGACAACTTGGTAAGTCAAACAGTAGTGTGCAATCTAATGACAAAAGTAACATCACGTGCAACTATTGTCATAAAGAGGGCCACTACAAATGGGACTGTCCTCAATTAAAGAGAAAAAATAATAAGCCAAATCATAAGGAAATTAAAAACTCGGCTAATATACATGAGGGATACGAATCAGCAGAACCTCTTGTAGCTTCAGTTGTCGATAACAAAGAGGAATGGATACTTGACTCTGGCTGTTCATTCCATGACTCCTTTGAAAGAATACTTTATTTATTTAACTGAATTTGACGAAGGAAAGGTTGTAATGGGAAACAACCAACACTGTCTAGTAAAAGGCATTGGAATTGTAAAATTTAAATTACATGATGAGTCTATTAAGCTACTAAAATTAGTAAGCTATGTTTCAAATCTGAAGAGAAATTTAATATCCTTAGGAACTCTTGATAAGAATGGCTATAGATATGAATCTGACTGAGGTATTCTAAAAGTTTTAAAGGAAGACACTTTGAAACTAGTTGGTAGGCTTTGTAGTGGCCTATATGTCTTGCAGGGAAAGGCTTTATTCGGTGAAGCAAACATTGTTGATAATCAATCTAATTCTGAAACCTATCTTTGGCACAAGCGGCTGGGACATATCAGTGAAAAAGGTTTGACGTGTCTTTTTAAACAGGGGTTAATTGGTAAGCACAAACCTACTGATATTACTTTTTGTGAACACTGTGTGTTGGGTAAATCTGCTAGACGTAGCTTTAAACCTGCAACATATGTTACAAAAGATAGGTTAGAATATGTGCATTCAGATTTACGGGGCCCTGCTAGAATAGCTACACATGGAGGTGCAAAGTATTTTTTATCTCTTATTGATGACTTCTCTAGAAAATTGTGGGTATTCATGTTAAAATCTAAAGATGAAGTGTTTAATCATTTCTTAGAATGGAAAAATTAGTAGAAAACCAGACTGGTAAGAGGATTAAATGCCTAAGAACTGATAATTGCTTCGAATTTTTAAACGAGAAGTTTGCTAGTCTTTGTAAATCTGCACGCATTAGTAGACATCTAACCAAAGCATGGACACCTCAGCAGAATGGACTAGCAAAGAGATTCAATAGAAATATTCTTGAGAAGGTTCGGTCTATATTGTCCAATGCTCAAATGCCAAGAACTTTTTGGGGTGAAGCAGTCAACACAACCACTTATATCATCAATCGCAGTTCATCCTCGACACTTGACTTCAAAACACCTCACGAAGTTTTGACAGGACAAGCTCCAAATCTTAAACATATGAAGGTTTTTGGATGTGCAGCATATGCTCACATAAGGCAAGACAAACTTCTGCCGAGAGCTAAAAGATGCCTATTTTTGGGATATCCAGAGGGTGTCAAAGCATACAAATTATGGTGCTTAGAACCAGGGGAATCAAAGTGCATCATCAGCAGAGATGCGACCTTCAACGAGCAAGACATGCCTTGGAAAACAGCAGTAACAAATGATAAAAGGGATCAACCAGAAGTCTTCTTTGAAATTGAGTTGCTATCCTCAAATGAAGGTAACTCAATTAATAACCCTGAGGATAAAAAATTTGACACACACAGTGACCCAACCATTGGTCTTGAGAAACTTGATATTCCTAGCACATCTCAGAGTGCAGCTGGTTGGGAAACAGAAGCTAGCTTTACTTGCTATCAGAACATTGCAGATATGCATTAATCCAAGCATAAATAAAGCATAACCAAGTAGTACCTAGAGTATTCTAGGGTCGAATCCACAGGGAAGGGGTAATAAAAATATTTAATAAACTAACTAATAAACACTCGGACGTATGGCACTTGATCAAAATAAAGTGAGAGTTGCGGTTGCTAAAGAAAAGTACTGCAAAATAAACTATGCGATGAAGAGTGAATATAAAAGGGACAATTAACTGAATAAAGCTATCAAGGCTTTTGTCGTGGCGGCCACATGCGTTAATAAGCTATCTAGTAGTACATATTTTGTTTGAAGTCACATTAATGCTTAAGTGAGAAATAAACATGTGATTCCCTTTCTGTACTACTCATGCGTTTGGCGTAGAACTAACAACGTTCTGTTCAATTAGCTCATGCGTTGACACTGTTCTCTAATGACTTGCAAGTGATTGCGTTATTCCTAAAGCAATCTAAGCACATTCATGAAATATCTCTCGCGGTAGTATTAATCCTAACACAACCTAGACTACATGTAAAGCGCAAGCTTGCTCTACTTAGATAATTTCACATGCATTACCTGTCAGGGATTTATCATGCTGCTACCGCAACCGAATGGCCAGACGGGAGTTAGTAATGAAAATATTATCGCATCTAAGCAGAAAACATTAATGATCATTCATTCAAAATATTACGCATACAAGATAGTTTGTCACCGCATGGGTGCCTAAGCTAAGCCTTGATAAAAGTAATTTAGCTCATGCTATGAAAGAAAGACATAACGCAATACATCATATCGCAATGAAATGTTGCTCTGGAAATAGTCTCTCTCTGATCTTCTGTCTTTTTCTCGTCCTTCTTTTCTTCTCCCCCTCTCCTTGGAAGCTGAGCGATTCTTATAGGCTGAGGATGCTTACTTCTCCAAGAAATTGGCTTGCGTGCCCAAATCATCTCTTGCCAACTTGCACATCAATCACGTGTCAGGGCGAGCATCCACTTAGTTGTCATTGTACGATTCACGCATAGGGATCTGCGCCTGCGCTGAAAATAACTTGGGCAAGGAAACAACTAAAGAAGTTATGTGTTAGTGATTACAAATATATGATTTCCTGCCTCATACAAGAATATTCATTTAAAGGTTAGTTATAACAATTCCCTACTATTCTGTGTTTACTCAGCGCATATTAGATCTTTTCAGCCGTCTTTAGCTTAAATTTAGGAGAGAAATAACTTGCATTTTGCAAGTTATCAAACCTCCAAACTTAAACTATTGCTTGTCCCCAAGCAATGCATTCTATCCACTCTACGAAAATGACATAGCTCAACTGATCTAGATTTTTGCAACTTTATTTTTCTTCATCTTTTACTCCAAAATATACATAAAGGATTTGTCCTTCAACTAGATTTCCCTTTTGGCTAAAGATTTCTTCTGCGCTATATACTCAAACCTGTGGCAACCTAGCAGCTAACTACTAAATGCTCATGCACAAGGCCAAAAATGCATGGTTTCAGTTTGGCTTACCCACACTTGCAATGAAAGGTATCCAACTACGGGGATTACATTTTTTTACTGCCCTAAACGCTCATGGGATACAAGTGTGCTTTCGCGCAGTGGCAAACGATGGGTGTCATGAATGCCCCTGGCTACTAACGCAGAGAAACCAGCGGAACGCATATGCTAGAACTGCTCTAATACTATCATACCCCCTAACTTAAATTGGACAATGTCCCCATTGTCTCCCAAACTTAAACTGGAATGCGATGGGCAATGGAGAAGCTTACTATGCGGCAACAGATACCAGAGCACTAAGCTTAAAAAAAATCCTAAGGCAAAATGGATAACTAAGCAAAGGGAAACCCTTTTTGTTAACTCTGTGATGGAAAAGATATGTTAAAAGATTAAGTTGTAAAGATTTATTCCTGAAGAGCTAACGCAGAGGAATTTCGACGGATGAAGGCATTATGCTAAGACAATGGGAGAGAATGCGATACTTTTTGAAAACGGAATATTTCATTAATGCGGCAGAGTTTATGTACATTAAGATCAGCGCATTACAAAATAAGAAAAGAAATGTTTACATGATAAAAATAAAATAAATTTTACTCATGCGGAGGGGATCGACGCGGGGATCTTGGCGGCGGCGGAGGCATCTGCAGGCGCACTTGGGAATGCCCAGCCCCATTTGGTTGTTACTGCGGTTGAGGTCGAAGGAATTGATCTGGCGCAGCGGGCAGATGGCCAAAAGAACTTGTCCAGCGCACTAGGAATAACATTAAGGCATTGACGCGCTAGGAAAGCTCCTGTTGCTGTCGGCGCAAAGGCTCTACAATTGCTTCTAGCTGCCGCTGCATCTCAAAAATTCGCTCTTCATCTATGTCAATAATGCTGGCGGACGGATTAGATGCGACATCAGGTTGCGACAGCTGATCAGTTGACGCAGAGGATTGTGCAGCCTGTCGTAGGAGATCTGGGATGGGAGTCTATTGGTCGCGGACTTCAATGCAGTTTACGGTCTCCAGCGAGCTTCGAGTAGGATGGGTTGGCGCGGGGGCGAAGGAGGTAGAGGCGGCAAGGCTTCGGTGTTGA

mRNA sequence

ATGAAAGCCTTGCTGATCCAACAAAAGGTAGCTAAAGCACTTCTCGATCCAGGTCAGCTTCCTCCAACTTTGTCTGAAGATGATAAACAAGAAATGCGTGAGATTGCTCACAGCTCGATTATCTTGCATCTTTTTGGGCTTTGGAGACAGGAGATGAAAGCCTTGCTGATCCAACAAAAGGTAGATAAAGCACTTCTCGATCCAGAACTTGCTAACTCAGGGGAAGAGGTAAAGGGGGTTGACCAAGCGGTAATCCTACTAAACTTCTTACATGTATCATATAATGAAATAAAAGCTGCGCTCAAATACGATAGAGATAACCTTACAGTCGATATGGTTCTTGATGCTTTAAAGAAAAAAGAACTTGAATTTAAAATTGAAAAGAAGGATGGTGATGTCTTATTTGGAAAAGGGATTTATCATGCTGCTACCGCAACCGAATGGCCAGACGGGAGTTAG

Coding sequence (CDS)

ATGAAAGCCTTGCTGATCCAACAAAAGGTAGCTAAAGCACTTCTCGATCCAGGTCAGCTTCCTCCAACTTTGTCTGAAGATGATAAACAAGAAATGCGTGAGATTGCTCACAGCTCGATTATCTTGCATCTTTTTGGGCTTTGGAGACAGGAGATGAAAGCCTTGCTGATCCAACAAAAGGTAGATAAAGCACTTCTCGATCCAGAACTTGCTAACTCAGGGGAAGAGGTAAAGGGGGTTGACCAAGCGGTAATCCTACTAAACTTCTTACATGTATCATATAATGAAATAAAAGCTGCGCTCAAATACGATAGAGATAACCTTACAGTCGATATGGTTCTTGATGCTTTAAAGAAAAAAGAACTTGAATTTAAAATTGAAAAGAAGGATGGTGATGTCTTATTTGGAAAAGGGATTTATCATGCTGCTACCGCAACCGAATGGCCAGACGGGAGTTAG

Protein sequence

MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFGLWRQEMKALLIQQKVDKALLDPELANSGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKGIYHAATATEWPDGS

Homology

[Close]

BLAST of Spg034748 vs. NCBI nr
Match: KAA0050719.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-16
Identity = 62/177 (35.03%), Postives = 99/177 (55.93%), Query Frame = 0


Query: 1   MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG-------------- 60
           ++A+L+Q KVAK +LD  +LP  ++E +K++M E+A+S+I+L+L                
Sbjct: 24  IRAILVQHKVAK-ILDEERLPDNITESEKRDMDEMAYSTILLYLSDEVLRLVDEATTTGE 83

Query: 61  LWRQEMKALLIQQKVDKALLDP-------------------------ELANSGEEVKGVD 120
           LW++     L +  ++K  +                           +L N GE++   +
Sbjct: 84  LWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEENLDEFQKIVVDLNNIGEKMSDEN 143

Query: 121 QAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG 139
           QAVILLN L  +Y E+KAA+KY RD+LT+ +VLDALK + LE K E+KDG++L  +G
Sbjct: 144 QAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARG 199

[Close]

BLAST of Spg034748 vs. NCBI nr
Match: TXG70425.1 (hypothetical protein EZV62_005360 [Acer yangbiense])

HSP 1 Score: 96.7 bits (239), Expect = 1.9e-16
Identity = 60/135 (44.44%), Postives = 91/135 (67.41%), Query Frame = 0


Query: 1   MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIIL----HLFGLWRQEMKALL 60
           MKA+L+QQK AK+L +   LP +LS ++KQ++ E A+++IIL    +LFG    + K+ L
Sbjct: 24  MKAILVQQKCAKSLEEEKDLPVSLSAEEKQDLLETAYNTIILNLADNLFGFKMDQSKS-L 83

Query: 61  IQQKVDKALLDPELAN--SGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVL 120
                D   L+ ELAN  S E +   +QAVI+LNFL  SY ++KAA+KY RD+L+++ VL
Sbjct: 84  EDNLDDFTKLNIELANCDSKEALSDENQAVIVLNFLSDSYKDLKAAIKYGRDSLSIEDVL 143

Query: 121 DALKKKELEFKIEKK 130
            AL+ +E+E + EK+
Sbjct: 144 GALRSREMEMRSEKR 157

[Close]

BLAST of Spg034748 vs. NCBI nr
Match: TYK25306.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 3.2e-16
Identity = 65/177 (36.72%), Postives = 102/177 (57.63%), Query Frame = 0


Query: 1   MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG-------------- 60
           ++A+L+Q KVAK +LD  +LP  ++E +K++M E+A+S+I+L+L                
Sbjct: 24  IRAILVQHKVAK-ILDEERLPDNITESEKRDMDEMAYSTILLYLSDEVLRLVDEATTTGE 83

Query: 61  LWRQ--------------EMKALLIQQKVDKAL-----LDP------ELANSGEEVKGVD 120
           LW++               +K      K+D++      LD       +L N GE++   +
Sbjct: 84  LWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENLDEFQKIVVDLNNIGEKMSDEN 143

Query: 121 QAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG 139
           QAVILLN L  +Y E+KAA+KY RD+LT+ +VLDALK + LE K E+KDG++L  +G
Sbjct: 144 QAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARG 199

[Close]

BLAST of Spg034748 vs. NCBI nr
Match: KAA0067607.1 (retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] >TYJ97155.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa])

HSP 1 Score: 95.9 bits (237), Expect = 3.2e-16
Identity = 63/173 (36.42%), Postives = 101/173 (58.38%), Query Frame = 0


Query: 1   MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG-------------- 60
           ++ +L+Q KVAK +LD  +LP  ++E +K++M E+ +S+I+L+L                
Sbjct: 24  IRVILVQHKVAK-ILDEEKLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTTGE 83

Query: 61  LWRQ----------EMKALLIQQKVDKAL-----LDP------ELANSGEEVKGVDQAVI 120
           LW++            K    + K+D++      LD       +L+N GE++   +QAVI
Sbjct: 84  LWKKLESLYLTKFLPNKEKFFRYKMDQSKSLEENLDEFQKIIVDLSNIGEKMSDENQAVI 143

Query: 121 LLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG 139
           LLN L  +Y E+KAA+KY RD+LT+ +VLDALK + LE K E+KDG++L  +G
Sbjct: 144 LLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARG 195

[Close]

BLAST of Spg034748 vs. NCBI nr
Match: KAA0046503.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK01915.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 5.5e-16
Identity = 60/177 (33.90%), Postives = 101/177 (57.06%), Query Frame = 0


Query: 1   MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG-------------- 60
           ++A+L+Q KVAK +LD G++P  ++E +K++M E+A+S+I+L+L                
Sbjct: 320 IRAILVQHKVAK-ILDEGRIPANITESEKRDMDEMAYSTILLYLSDEVLRLVDEATTTAE 379

Query: 61  LWRQ--------------EMKALLIQQKVDKA-----------LLDPELANSGEEVKGVD 120
           LW++               +K      K+D++            +  +L N GE++   +
Sbjct: 380 LWKKLESLYLTKSLPNKIYIKEKFFGYKIDQSKSLEENLNEFQKIVVDLNNIGEKMSDEN 439

Query: 121 QAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG 139
           Q +ILLN L  +Y E+KAA+KY +D+LT+ +VLDALK + LE K E+KDG++L  +G
Sbjct: 440 QTIILLNSLPKTYREVKAAIKYGQDSLTMSIVLDALKTRNLEIKKERKDGELLMARG 495

[Close]

BLAST of Spg034748 vs. ExPASy TrEMBL
Match: A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 6.9e-17
Identity = 62/177 (35.03%), Postives = 99/177 (55.93%), Query Frame = 0


Query: 1   MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG-------------- 60
           ++A+L+Q KVAK +LD  +LP  ++E +K++M E+A+S+I+L+L                
Sbjct: 24  IRAILVQHKVAK-ILDEERLPDNITESEKRDMDEMAYSTILLYLSDEVLRLVDEATTTGE 83

Query: 61  LWRQEMKALLIQQKVDKALLDP-------------------------ELANSGEEVKGVD 120
           LW++     L +  ++K  +                           +L N GE++   +
Sbjct: 84  LWKKLESLYLTKSLLNKIYIKEKFFGYKMDQSKSLEENLDEFQKIVVDLNNIGEKMSDEN 143

Query: 121 QAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG 139
           QAVILLN L  +Y E+KAA+KY RD+LT+ +VLDALK + LE K E+KDG++L  +G
Sbjct: 144 QAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARG 199

[Close]

BLAST of Spg034748 vs. ExPASy TrEMBL
Match: A0A5C7IML8 (gag_pre-integrs domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005360 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 9.1e-17
Identity = 60/135 (44.44%), Postives = 91/135 (67.41%), Query Frame = 0


Query: 1   MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIIL----HLFGLWRQEMKALL 60
           MKA+L+QQK AK+L +   LP +LS ++KQ++ E A+++IIL    +LFG    + K+ L
Sbjct: 24  MKAILVQQKCAKSLEEEKDLPVSLSAEEKQDLLETAYNTIILNLADNLFGFKMDQSKS-L 83

Query: 61  IQQKVDKALLDPELAN--SGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVL 120
                D   L+ ELAN  S E +   +QAVI+LNFL  SY ++KAA+KY RD+L+++ VL
Sbjct: 84  EDNLDDFTKLNIELANCDSKEALSDENQAVIVLNFLSDSYKDLKAAIKYGRDSLSIEDVL 143

Query: 121 DALKKKELEFKIEKK 130
            AL+ +E+E + EK+
Sbjct: 144 GALRSREMEMRSEKR 157

[Close]

BLAST of Spg034748 vs. ExPASy TrEMBL
Match: A0A5A7VKC2 (Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00310 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16
Identity = 63/173 (36.42%), Postives = 101/173 (58.38%), Query Frame = 0


Query: 1   MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG-------------- 60
           ++ +L+Q KVAK +LD  +LP  ++E +K++M E+ +S+I+L+L                
Sbjct: 24  IRVILVQHKVAK-ILDEEKLPENITESEKRDMDEMTYSTILLYLSDEVLRLVDEATTTGE 83

Query: 61  LWRQ----------EMKALLIQQKVDKAL-----LDP------ELANSGEEVKGVDQAVI 120
           LW++            K    + K+D++      LD       +L+N GE++   +QAVI
Sbjct: 84  LWKKLESLYLTKFLPNKEKFFRYKMDQSKSLEENLDEFQKIIVDLSNIGEKMSDENQAVI 143

Query: 121 LLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG 139
           LLN L  +Y E+KAA+KY RD+LT+ +VLDALK + LE K E+KDG++L  +G
Sbjct: 144 LLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARG 195

[Close]

BLAST of Spg034748 vs. ExPASy TrEMBL
Match: A0A5D3DNU1 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004440 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16
Identity = 65/177 (36.72%), Postives = 102/177 (57.63%), Query Frame = 0


Query: 1   MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG-------------- 60
           ++A+L+Q KVAK +LD  +LP  ++E +K++M E+A+S+I+L+L                
Sbjct: 24  IRAILVQHKVAK-ILDEERLPDNITESEKRDMDEMAYSTILLYLSDEVLRLVDEATTTGE 83

Query: 61  LWRQ--------------EMKALLIQQKVDKAL-----LDP------ELANSGEEVKGVD 120
           LW++               +K      K+D++      LD       +L N GE++   +
Sbjct: 84  LWKKLESLYLTKSLPNKIYIKEKFFGYKMDQSKSLEENLDEFQKIVVDLNNIGEKMSDEN 143

Query: 121 QAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG 139
           QAVILLN L  +Y E+KAA+KY RD+LT+ +VLDALK + LE K E+KDG++L  +G
Sbjct: 144 QAVILLNSLPETYREVKAAIKYGRDSLTMSIVLDALKTRNLEIKKERKDGELLMARG 199

[Close]

BLAST of Spg034748 vs. ExPASy TrEMBL
Match: A0A5D3BRV3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3741G00040 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.6e-16
Identity = 60/177 (33.90%), Postives = 101/177 (57.06%), Query Frame = 0


Query: 1   MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG-------------- 60
           ++A+L+Q KVAK +LD G++P  ++E +K++M E+A+S+I+L+L                
Sbjct: 320 IRAILVQHKVAK-ILDEGRIPANITESEKRDMDEMAYSTILLYLSDEVLRLVDEATTTAE 379

Query: 61  LWRQ--------------EMKALLIQQKVDKA-----------LLDPELANSGEEVKGVD 120
           LW++               +K      K+D++            +  +L N GE++   +
Sbjct: 380 LWKKLESLYLTKSLPNKIYIKEKFFGYKIDQSKSLEENLNEFQKIVVDLNNIGEKMSDEN 439

Query: 121 QAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG 139
           Q +ILLN L  +Y E+KAA+KY +D+LT+ +VLDALK + LE K E+KDG++L  +G
Sbjct: 440 QTIILLNSLPKTYREVKAAIKYGQDSLTMSIVLDALKTRNLEIKKERKDGELLMARG 495

The following BLAST results are available for this feature:

BLAST of Spg034748 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050719.1	1.4e-16	35.03	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
TXG70425.1	1.9e-16	44.44	hypothetical protein EZV62_005360 [Acer yangbiense]	[more]
TYK25306.1	3.2e-16	36.72	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0067607.1	3.2e-16	36.42	retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa]...	[more]
KAA0046503.1	5.5e-16	33.90	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Spg034748 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg034748 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UB25	6.9e-17	35.03	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5C7IML8	9.1e-17	44.44	gag_pre-integrs domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62...	[more]
A0A5A7VKC2	1.5e-16	36.42	Retrotransposon protein, putative, Ty1-copia subclass OS=Cucumis melo var. makuw...	[more]
A0A5D3DNU1	1.5e-16	36.72	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5D3BRV3	2.6e-16	33.90	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Spg034748 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg034748.1	Spg034748.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding