Spg034715 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg034715
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	NADPH-dependent pterin aldehyde reductase-like
Location	scaffold7: 44401218 .. 44402326 (+)
RNA-Seq Expression	Spg034715
Synteny	Spg034715

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATCATGGCGAGAGGGATTGAGAGGAGTGGTAGAGTTGATGTACCAGTCGGATTCGAGCACGAATTTGAAGGAGGAAATGGAGGCAGCAATGGCGACGTTGTGGTCGTGGTCGTTGGTGGTTCTAGTCTAACAAGCGACGTCGTCGTGGTCGGCGTCGAGGTAGAGGATTCCAGTGGATTTGGGAAGCATCTGAGCGGAGAAAGTTGCAGAGAAGAGAAAGATGGTTGATTGTTGAAATTTGTCAAATTTGGGTCGAAAACTGATGGGTTTTTGAGTGGGGAGGAGGAAAGAAAAAAAGAAGAAGAAGAAAAAAAGAAAACCAGAGGAAGGAGAAGATACATGCGCGCCAATTGAGGGGCAAATCGGGAATATTAAAAATCGATTTAAAAACTTTGCCATATTTGCAATTATTTTAAAAAGTTGCTAATTTTGCCATTAAGCACCCTAATTTTGCCACCCATTACAATTATCCTTGAAAATTCAACTTATAAATACTACTAATATCCATTAGGCTTTTTCTTTCTTTTCTTTTTTATTATACATTTTACAAATACTTTTAAAATCTAAGTCAAATTTTGAAAATTAATAAAAAGTAGTATTTAGAAACTTATTTTTGTTTTTAGAATTTGGCTAAGAATTCAAATGTTTCCTAAGAAGGATGAAAATCATTGTATATAAATTGGAAGAAAAAAGTACAATTTTCAAGGGACTTAAATTTTTTAGTTTTCCAAACTTGACTTGGATTTTAAAAACATAGGTAAAATATAGATGACATGGAATAATGTTTAATTTTGAGGGCTAATTTATCAAAAAAGTTTTGTTACACCATTATCAAAATTGTGTGTATTAATGGCAAAATCTAAAACTTTACTATTTTTCATATTTTTTAGATGGCACCATATTGTGCATCAAAATGGGCGGTTGAAGGATTAAGCAAGTCTATCGCAAAAGAAGTACCGGAGGGAATGGCAGTTGTGGCCTTAAATCCTGGCCTCATATATACAGACATGCTTGTCTTATGCTTTGGTGACTTGGCTTCACAATATCCATCGCCTGAAAAATGGTATGAAATATTATCCTACTATGACTGTAATGTTATATAG

mRNA sequence

ATGGAAATCATGGCGAGAGGGATTGAGAGGAGTGGTAGAGTTGATGTACCAGTCGGATTCGAGCACGAATTTGAAGGAGGAAATGGAGGCAGCAATGGCGACGTTGTGGTCGTGGTCGTTGGTGGTTCTAGTCTAACAAGCGACGTCGTCGTGGTCGGCGTCGAGATGGCACCATATTGTGCATCAAAATGGGCGGTTGAAGGATTAAGCAAGTCTATCGCAAAAGAAGTACCGGAGGGAATGGCAGTTGTGGCCTTAAATCCTGGCCTCATATATACAGACATGCTTGTCTTATGCTTTGGTGACTTGGCTTCACAATATCCATCGCCTGAAAAATGGTATGAAATATTATCCTACTATGACTGTAATGTTATATAG

Coding sequence (CDS)

ATGGAAATCATGGCGAGAGGGATTGAGAGGAGTGGTAGAGTTGATGTACCAGTCGGATTCGAGCACGAATTTGAAGGAGGAAATGGAGGCAGCAATGGCGACGTTGTGGTCGTGGTCGTTGGTGGTTCTAGTCTAACAAGCGACGTCGTCGTGGTCGGCGTCGAGATGGCACCATATTGTGCATCAAAATGGGCGGTTGAAGGATTAAGCAAGTCTATCGCAAAAGAAGTACCGGAGGGAATGGCAGTTGTGGCCTTAAATCCTGGCCTCATATATACAGACATGCTTGTCTTATGCTTTGGTGACTTGGCTTCACAATATCCATCGCCTGAAAAATGGTATGAAATATTATCCTACTATGACTGTAATGTTATATAG

Protein sequence

MEIMARGIERSGRVDVPVGFEHEFEGGNGGSNGDVVVVVVGGSSLTSDVVVVGVEMAPYCASKWAVEGLSKSIAKEVPEGMAVVALNPGLIYTDMLVLCFGDLASQYPSPEKWYEILSYYDCNVI

Homology

[Close]

BLAST of Spg034715 vs. NCBI nr
Match: XP_022156279.1 (NADPH-dependent pterin aldehyde reductase-like isoform X1 [Momordica charantia])

HSP 1 Score: 110.5 bits (275), Expect = 1.0e-20
Identity = 52/76 (68.42%), Postives = 59/76 (77.63%), Query Frame = 0


Query: 55  EMAPYCASKWAVEGLSKSIAKEVPEGMAVVALNPGLIYTDMLVLCFGDLASQYPSPEKWY 114
           + APYC SKWAVEGLSK IAK +PEGMA VALNPG IYTDML LC G+LASQ+ SP+KWY
Sbjct: 162 DFAPYCTSKWAVEGLSKCIAKGLPEGMATVALNPGTIYTDMLALCMGELASQFQSPDKWY 221

Query: 115 EILS-----YYDCNVI 126
            I+S      + CNVI
Sbjct: 222 GIISLLIFFLHHCNVI 237

[Close]

BLAST of Spg034715 vs. NCBI nr
Match: XP_022156282.1 (NADPH-dependent pterin aldehyde reductase-like isoform X3 [Momordica charantia])

HSP 1 Score: 110.5 bits (275), Expect = 1.0e-20
Identity = 52/76 (68.42%), Postives = 59/76 (77.63%), Query Frame = 0


Query: 55  EMAPYCASKWAVEGLSKSIAKEVPEGMAVVALNPGLIYTDMLVLCFGDLASQYPSPEKWY 114
           + APYC SKWAVEGLSK IAK +PEGMA VALNPG IYTDML LC G+LASQ+ SP+KWY
Sbjct: 161 DFAPYCTSKWAVEGLSKCIAKGLPEGMATVALNPGTIYTDMLALCMGELASQFQSPDKWY 220

Query: 115 EILS-----YYDCNVI 126
            I+S      + CNVI
Sbjct: 221 GIISLLIFFLHHCNVI 236

[Close]

BLAST of Spg034715 vs. NCBI nr
Match: XP_022987850.1 (NADPH-dependent pterin aldehyde reductase-like [Cucurbita maxima])

HSP 1 Score: 104.0 bits (258), Expect = 9.6e-19
Identity = 44/59 (74.58%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 55  EMAPYCASKWAVEGLSKSIAKEVPEGMAVVALNPGLIYTDMLVLCFGDLASQYPSPEKW 114
           + APYC+SKWA+EGLSKS+AKE+P+GM +V LNPG IYTDMLVLC GDLAS++ SPEKW
Sbjct: 156 DFAPYCSSKWAIEGLSKSVAKELPKGMGIVTLNPGSIYTDMLVLCCGDLASKFQSPEKW 214

[Close]

BLAST of Spg034715 vs. NCBI nr
Match: KAF9856287.1 (hypothetical protein H0E87_008807 [Populus deltoides])

HSP 1 Score: 102.4 bits (254), Expect = 2.8e-18
Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 56  MAPYCASKWAVEGLSKSIAKEVPEGMAVVALNPGLIYTDMLVLCFGDLASQYPSPEKWYE 115
           +APYCASKWAVEGLS+S+AKE+PEGMA+VALNPG+I+TDML  CFG  AS Y  P+ WY 
Sbjct: 172 VAPYCASKWAVEGLSRSVAKELPEGMAIVALNPGVIHTDMLTSCFGTSASLYQDPDTWYL 231

Query: 116 ILSYYD 122
           + S  D
Sbjct: 232 VYSLLD 237

[Close]

BLAST of Spg034715 vs. NCBI nr
Match: XP_039157438.1 (LOW QUALITY PROTEIN: NADPH-dependent pterin aldehyde reductase [Eucalyptus grandis])

HSP 1 Score: 102.1 bits (253), Expect = 3.7e-18
Identity = 45/58 (77.59%), Postives = 53/58 (91.38%), Query Frame = 0


Query: 56  MAPYCASKWAVEGLSKSIAKEVPEGMAVVALNPGLIYTDMLVLCFGDLASQYPSPEKW 114
           +APYCASKWAVEGLS+S+AKE+PEGMAVVALNPG+I TDMLV CFG+ ASQY +P+ W
Sbjct: 165 VAPYCASKWAVEGLSRSVAKELPEGMAVVALNPGVINTDMLVSCFGESASQYETPDAW 222

[Close]

BLAST of Spg034715 vs. ExPASy Swiss-Prot
Match: Q9SY73 (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana OX=3702 GN=At1g10310 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-17
Identity = 39/58 (67.24%), Postives = 50/58 (86.21%), Query Frame = 0


Query: 56  MAPYCASKWAVEGLSKSIAKEVPEGMAVVALNPGLIYTDMLVLCFGDLASQYPSPEKW 114
           +APYCASKWA+EGLS+++AKEV EGMAVVALNPG+I T++L  CFG+ AS Y +P+ W
Sbjct: 163 VAPYCASKWAIEGLSRAVAKEVVEGMAVVALNPGVINTELLTSCFGNSASLYQAPDAW 220

[Close]

BLAST of Spg034715 vs. ExPASy TrEMBL
Match: A0A6J1DSY6 (NADPH-dependent pterin aldehyde reductase-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023210 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 5.0e-21
Identity = 52/76 (68.42%), Postives = 59/76 (77.63%), Query Frame = 0


Query: 55  EMAPYCASKWAVEGLSKSIAKEVPEGMAVVALNPGLIYTDMLVLCFGDLASQYPSPEKWY 114
           + APYC SKWAVEGLSK IAK +PEGMA VALNPG IYTDML LC G+LASQ+ SP+KWY
Sbjct: 162 DFAPYCTSKWAVEGLSKCIAKGLPEGMATVALNPGTIYTDMLALCMGELASQFQSPDKWY 221

Query: 115 EILS-----YYDCNVI 126
            I+S      + CNVI
Sbjct: 222 GIISLLIFFLHHCNVI 237

[Close]

BLAST of Spg034715 vs. ExPASy TrEMBL
Match: A0A6J1DRM4 (NADPH-dependent pterin aldehyde reductase-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111023210 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 5.0e-21
Identity = 52/76 (68.42%), Postives = 59/76 (77.63%), Query Frame = 0


Query: 55  EMAPYCASKWAVEGLSKSIAKEVPEGMAVVALNPGLIYTDMLVLCFGDLASQYPSPEKWY 114
           + APYC SKWAVEGLSK IAK +PEGMA VALNPG IYTDML LC G+LASQ+ SP+KWY
Sbjct: 161 DFAPYCTSKWAVEGLSKCIAKGLPEGMATVALNPGTIYTDMLALCMGELASQFQSPDKWY 220

Query: 115 EILS-----YYDCNVI 126
            I+S      + CNVI
Sbjct: 221 GIISLLIFFLHHCNVI 236

[Close]

BLAST of Spg034715 vs. ExPASy TrEMBL
Match: A0A6J1JHZ2 (NADPH-dependent pterin aldehyde reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111485267 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 4.7e-19
Identity = 44/59 (74.58%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 55  EMAPYCASKWAVEGLSKSIAKEVPEGMAVVALNPGLIYTDMLVLCFGDLASQYPSPEKW 114
           + APYC+SKWA+EGLSKS+AKE+P+GM +V LNPG IYTDMLVLC GDLAS++ SPEKW
Sbjct: 156 DFAPYCSSKWAIEGLSKSVAKELPKGMGIVTLNPGSIYTDMLVLCCGDLASKFQSPEKW 214

[Close]

BLAST of Spg034715 vs. ExPASy TrEMBL
Match: A0A0A0KJ58 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G002580 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 6.1e-19
Identity = 43/65 (66.15%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 56  MAPYCASKWAVEGLSKSIAKEVPEGMAVVALNPGLIYTDMLVLCFGDLASQYPSPEKWYE 115
           +APYCASKWA+EGL++S+AKE+PEGM +VALNPG+I TDML  CFGD AS Y +P+ WY 
Sbjct: 117 VAPYCASKWAIEGLTRSVAKELPEGMGIVALNPGVINTDMLASCFGDSASLYQTPDSWYS 176

Query: 116 ILSYY 121
           +L Y+
Sbjct: 177 LLLYF 181

[Close]

BLAST of Spg034715 vs. ExPASy TrEMBL
Match: A0A6J1DPU9 (NADPH-dependent pterin aldehyde reductase-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023210 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.3e-18
Identity = 45/59 (76.27%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 55  EMAPYCASKWAVEGLSKSIAKEVPEGMAVVALNPGLIYTDMLVLCFGDLASQYPSPEKW 114
           + APYC SKWAVEGLSK IAK +PEGMA VALNPG IYTDML LC G+LASQ+ SP+KW
Sbjct: 162 DFAPYCTSKWAVEGLSKCIAKGLPEGMATVALNPGTIYTDMLALCMGELASQFQSPDKW 220

[Close]

BLAST of Spg034715 vs. TAIR 10
Match: AT1G10310.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 7.9e-19
Identity = 39/58 (67.24%), Postives = 50/58 (86.21%), Query Frame = 0


Query: 56  MAPYCASKWAVEGLSKSIAKEVPEGMAVVALNPGLIYTDMLVLCFGDLASQYPSPEKW 114
           +APYCASKWA+EGLS+++AKEV EGMAVVALNPG+I T++L  CFG+ AS Y +P+ W
Sbjct: 163 VAPYCASKWAIEGLSRAVAKEVVEGMAVVALNPGVINTELLTSCFGNSASLYQAPDAW 220

The following BLAST results are available for this feature:

BLAST of Spg034715 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156279.1	1.0e-20	68.42	NADPH-dependent pterin aldehyde reductase-like isoform X1 [Momordica charantia]	[more]
XP_022156282.1	1.0e-20	68.42	NADPH-dependent pterin aldehyde reductase-like isoform X3 [Momordica charantia]	[more]
XP_022987850.1	9.6e-19	74.58	NADPH-dependent pterin aldehyde reductase-like [Cucurbita maxima]	[more]
KAF9856287.1	2.8e-18	68.18	hypothetical protein H0E87_008807 [Populus deltoides]	[more]
XP_039157438.1	3.7e-18	77.59	LOW QUALITY PROTEIN: NADPH-dependent pterin aldehyde reductase [Eucalyptus grand...	[more]

BLAST of Spg034715 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SY73	1.1e-17	67.24	NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Spg034715 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSY6	5.0e-21	68.42	NADPH-dependent pterin aldehyde reductase-like isoform X1 OS=Momordica charantia...	[more]
A0A6J1DRM4	5.0e-21	68.42	NADPH-dependent pterin aldehyde reductase-like isoform X3 OS=Momordica charantia...	[more]
A0A6J1JHZ2	4.7e-19	74.58	NADPH-dependent pterin aldehyde reductase-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A0A0KJ58	6.1e-19	66.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G002580 PE=3 SV=1	[more]
A0A6J1DPU9	2.3e-18	76.27	NADPH-dependent pterin aldehyde reductase-like isoform X2 OS=Momordica charantia...	[more]

BLAST of Spg034715 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10310.1	7.9e-19	67.24	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 32..96 e-value: 4.1E-9 score: 36.2
None	No IPR available	GENE3D	3.40.50.720		coord: 20..107 e-value: 2.8E-11 score: 45.0
None	No IPR available	PANTHER	PTHR45267	FAMILY NOT NAMED	coord: 53..115
None	No IPR available	CDD	cd05233	SDR_c	coord: 55..96 e-value: 4.7495E-12 score: 58.4492
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 44..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg034715.1	Spg034715.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006760	folic acid-containing compound metabolic process
cellular_component	GO:0005829	cytosol
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
molecular_function	GO:0016491	oxidoreductase activity