Spg034695 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg034695
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	50S ribosomal protein L14, chloroplastic
Location	scaffold7: 46267585 .. 46271865 (-)
RNA-Seq Expression	Spg034695
Synteny	Spg034695

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCGATGAAACCAACGGAATCCACTCTCGTGACATGATCGAAGTTCGATCCACCACTTTGAGGAAAGAGATGAGACGGTCTACCCGTCTTTACACATACGAGAAATCACTCACGATGGACAAGAGGTGTCGACAACGTGAGCTTTACTGCCTGGCTTTCGGCCTTCTTTCTTGATCCAACTTCATGACTCTTTGAGACCTACTTACTGCTTGTGCTTGGCTCAGGATATCCTCCTTTCTTCAAAGCTTTCTAATCAAGTGAGGAAAGACGCAAACCTTCACAGCCTTTTTTTTCCCAAATGAAAGGTATGCGGAGAGAGTCCTTACTTCTCTTTCTCTTGCCTTTTCCGACATAATTCGGGGCTATCGGTTCCGTTCTGTTCCCTCTCTACCTCTTCTTTTTGACCTAACTTAACAATCTTTTATGCCCGGCCATACCAACATGGGAAACCTAGCTTCCCTCCCTTTGAAGTGCATTTATCAGATCAGCTCCCCGAGTCACTAGAAAGAGGGTGAAAGGCCCACTACTTCTTCATTCATGGCCTATTTTTTTATTGATCTCCCTTTCGTATTCATTCGACCTGAGGCAAAAGAGAAGTCATACAAAGAAAGGTTCTTTCATGCAATGCATAACGGGCGGGCCTCCTATTGATTCCTCCAACTCAATGAATGAAGGGAGGAGTATGAGGAAGGCTGGCTTTCTATATGAAGATGAAAAGAAAAAAAAAGGATCGCAACGTCCTACTTAACTAGTCCATCAACCTATAGGACTGCCATTAGTGCTTCTAGCCCGATTCTTTACAGTCAGACCAGTTTTCTTCATCGTTAGCTAAGAAAATTGATTCTCTTACTTAGAGAGATGTAAATTGATAGAAGAATTTAAATTTCCCTCAAACCCTTTTGAATGTAGCAGATAACAGCGGAGCCCGAGAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAGAAAGTCGTCCCAAATACACCTCTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACGGTATGATAATACGATATGATGACAATCCTGCGGTTGTTATTGATCAAGAAAGAAATCCAAAAGGAACTCGAATTTTTGGTGCGATTGCCCGAGAATTGAGACAGTGAAATTTCACTAAAATAATTTCATTAGCACCTGAAGTATTATAAGATAAGACCGTGAGATAGTTATAGTATTTGAATGAAATTAATTAGTAGATTGTGTATCATGTATATACCTTTTCAAATTAATAACTATTTAATAAAAAAGCATGTTGATTAGATAAAAATTTAAAGTAACCAATCTTTTTTGTTTCTCATGGGTAAGGACACTATTGCTAACATAATAACCTCTATTCCCAATGCTGACATGAATAGAAAAGGAATGGTTCGAATACCATCTACTAACATCACCGAAAACATTGTTAAAATACTTTTACGAGAAGGTTTTATTGAAAACGTAAGGAAACATCGGGAAAGCAACAAGGATTTTTGGGTTTTAACCCTACGACATAGAAGAAATAGGAAAGGACCATATAAAACGATTTTCAATTTAAAACGGATCAATCGACCTGGTCTCCGAATCTATTCTAACTATCAACGAATTCCTAGAATTTTAGGCAGAATGGGCATTGTAATTCTTTCTACTTCTCGGGGTATAATGACAGACCGAGAAGCTCGATTATAGGGAATCGACGGAGAAATTTTATGTTATATATGGTAATCTTTATGATATTCGAATTATACACAGAACTTCCCTATTTGTAAAAAAAAAAAAAAAAAAAAGGTGGGTTTCTAATACCACTCCTCCTTCATTAAATGATACTTTGAAAGGGATTTCTCATCTGGAATGAAAGAACAAAAAAGGATTTAGAAAGGTATAATTACTTAATCAATTCCCAATGGTATGTTTGGGGTTTGTTTAGATAATGAGGATCCAATTCTAGGTTACGTTTCAGGAAGGATTCCATATAGAGTCAAAATTGCAGTAAGTTGTTACGATTCAACCAGAACCAAAGGGCGTATAATTTAGACACTACGAAACAAAGACAAAGATTCGAATGATACAATTCGAAATAGAAAATTTCAAGAAATTGATTTTCTTCCAATAAGTAGATTCGGAATTAAGGTAAGGAATGACAAATATGAAAATAAGGGCCTCCATTCGGAAAATTTGTGAAAAATGTCGACTGATCCGTAGGCAGAGACGAATTATGGTAATTTGTTCCAATCCGAGACATAAACAAAGACAAGGATAATCTTTATAAAAAAATGACCCCTAAGAGCGTCTTGTAAACAAATTATTCGATCTGGAGATCCCAGCAAGGCTGCCGGAGACATCATTAAACCACCCAGGGATGTCTCTTGCAAAGAAGAATTCGTAGAGATTTTTCCAGAACCCCAGTCCAGCCTACCCGACTGATATAATCTAGAATCCACTCTCCGCCTTTACTTAACTTAGTAGTAGGCGAATAGTGACCCTATTTGTATGCGCATTCACACGACGGGCACGTTCCAACCAAGATCTCCCGCAACGAGAACCTAAGACATGGTTGATTGATAGTAAGTTGAAACAATAAATGGATCATAGGTTGGTTGAATATTGAGTTCCGCTTAGGCTACGTGTTCTGTTTACGAGCTACTAAGCCGGCACACAGGATCTTAGACGGGTTTCGTCCCCTTTCGGGAACACCTTCTTACTAGTACGGGCGGCGCCTGATGCAAATATACCGAAAACAGAAGATATCGTTGGTCGATTCTTTATAGATGAGTTGTAGTCGATTCGCCCCTTATGTTATGGCTCGTCTCGCTCTTAGTCACTCGCAGGATTCGGATAGGGGGGCTGCAAGTCTTTTCTGAAAAAACTCGCAGTTCTACCCCTCTCCATATCGGTCGAGCTGCTTCGCCCTATATATATATTATTTTTTAGATACTAACTCTTTGGTTGGATCGGACAGGGACTTCTATAAAGATCTTTCCACTCATTCATCATACTTAAAGTCGAAGTCACAGCCGACATGACCTCACTACCTGTATAAAGCGTGCATCTTTGCTCAGGGATGGCTCGAAAAAATAACGAGAATCGGTGTCGGAGTGGTACTACAAGATGGCGATTTATCGTATAGAAGAATAGATCCGCGGACCTATTGATTGACCATAGATGCGACCGCTATCTAAGAGAATCTTAGTAGTTCTTCTATCGTTCAAGGGCAAGGGAAAACATGTAGCGGCTTGCCTAGATCTCGTATTTCCCACGTAGTCTATCGGTCAAACCAACGATTCTCTTCTCCAAGTAATAGAGAGATTCTTTTTCTTTTTATGGTATGTAGCTCCGCGAGCTAGGAGCGCATCATCGGGGCAGGGCGAAAACGAACATAAGATCATCATCATGGCCCTTTTCTTGTTTCTTTTGTTTGTGTCCGGCTTTAGTTAAAAAGAGGTGTGTGGGTTTTTTTAAGGCTTATCCGGGGGCTGCTGCTCTGAGGCATCCAATTCCTCTTCTTTCTTTTCCTGTTGATCTCACATCGAGAGCTGCTTCTTCTTGTTCAGGGTCAGAAGATGAGAGATCTTCCTCTGATTCTGAGAAATCGGTCAAGCGGGGGGCTACCCTCGACTCACCTCTCGAGATATAAAAACTCCTCCCCAGAGGAGAGCAGAAGCTCCAGGATGAGTATGTCCTGGATTCCCGAATTCATTCTCGTCCTGATCCACCATGGAATTTTCTAAATCTACAAAAACATTGACGGAGAGGGCTCGTAATGATCTTTGAGAAGATCACAAGGTGCTGATAGGAGGGGGATCCGTAGGTTTTTGTGAAAGGGATGCCCCGGATCTGACATGTCGCTTGCTGAAAAGAAAAACCGAATTCCTCTATTTGATGTCGATTCATCCACACTTCCATTCTTTGTAGAGGAAGGCTAACTGCTTGCTGGCTGGGAGTTGTATGAGCGGTAACGTCCACGTACGGCTCTGTGAGAAGGGCGGTGGACAGAAATGGCCTTGTTGTACCTCACTCTCGTCTTCAATGGGGTCTGCTCTTTTTTTTGGGAGAGTATGCCAATATGATCTTAATGAGGTGCGGGGCTTTGCATCTGACATTCGTTGGGCTTCAGGGATGGATGTAGACCCATCGGGCAGGGATAATCATTCTGGTCCTGGGAGAGGTGGCGACCATTCTCAAGAACCAAAAAGACTGAGCTGA

mRNA sequence

ATGACCGATGAAACCAACGGAATCCACTCTCGTGACATGATCGAAGTTCGATCCACCACTTTGAGGAAAGAGATGAGACGGTCTACCCGTCTTTACACATACGAGAAATCACTCACGATGGACAAGAGGTGTCGACAACCAGATAACAGCGGAGCCCGAGAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAGAAAGTCGTCCCAAATACACCTCTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACGATAATGAGGATCCAATTCTAGGTTACGTTTCAGGAAGGATTCCATATAGAGTCAAAATTGCAGCTTATCCGGGGGCTGCTGCTCTGAGGCATCCAATTCCTCTTCTTTCTTTTCCTGTTGATCTCACATCGAGAGCTGCTTCTTCTTGTTCAGGGTCAGAAGATGAGAGATCTTCCTCTGATTCTGAGAAATCGAGGAAGGCTAACTGCTTGCTGGCTGGGAGTTGTATGAGCGGTAACGTCCACGTACGGCTCTGTGAGAAGGGCGGTGGACAGAAATGGCCTTGTTGTACCTCACTCTCGTCTTCAATGGGGTCTGCTCTTTTTTTTGGGAGAGTATGCCAATATGATCTTAATGAGGTGCGGGGCTTTGCATCTGACATTCGTTGGGCTTCAGGGATGGATGTAGACCCATCGGGCAGGGATAATCATTCTGGTCCTGGGAGAGGTGGCGACCATTCTCAAGAACCAAAAAGACTGAGCTGA

Coding sequence (CDS)

ATGACCGATGAAACCAACGGAATCCACTCTCGTGACATGATCGAAGTTCGATCCACCACTTTGAGGAAAGAGATGAGACGGTCTACCCGTCTTTACACATACGAGAAATCACTCACGATGGACAAGAGGTGTCGACAACCAGATAACAGCGGAGCCCGAGAATTGATGTGTATTCGAATCATAGGGGCTAGTAATCGACGATATGCTCATATTGGTGACGTTATTGTTGCTGTAATCAAGAAAGTCGTCCCAAATACACCTCTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGAGAAAACGATAATGAGGATCCAATTCTAGGTTACGTTTCAGGAAGGATTCCATATAGAGTCAAAATTGCAGCTTATCCGGGGGCTGCTGCTCTGAGGCATCCAATTCCTCTTCTTTCTTTTCCTGTTGATCTCACATCGAGAGCTGCTTCTTCTTGTTCAGGGTCAGAAGATGAGAGATCTTCCTCTGATTCTGAGAAATCGAGGAAGGCTAACTGCTTGCTGGCTGGGAGTTGTATGAGCGGTAACGTCCACGTACGGCTCTGTGAGAAGGGCGGTGGACAGAAATGGCCTTGTTGTACCTCACTCTCGTCTTCAATGGGGTCTGCTCTTTTTTTTGGGAGAGTATGCCAATATGATCTTAATGAGGTGCGGGGCTTTGCATCTGACATTCGTTGGGCTTCAGGGATGGATGTAGACCCATCGGGCAGGGATAATCATTCTGGTCCTGGGAGAGGTGGCGACCATTCTCAAGAACCAAAAAGACTGAGCTGA

Protein sequence

MTDETNGIHSRDMIEVRSTTLRKEMRRSTRLYTYEKSLTMDKRCRQPDNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKRENDNEDPILGYVSGRIPYRVKIAAYPGAAALRHPIPLLSFPVDLTSRAASSCSGSEDERSSSDSEKSRKANCLLAGSCMSGNVHVRLCEKGGGQKWPCCTSLSSSMGSALFFGRVCQYDLNEVRGFASDIRWASGMDVDPSGRDNHSGPGRGGDHSQEPKRLS

Homology

[Close]

BLAST of Spg034695 vs. NCBI nr
Match: RVW31126.1 (hypothetical protein CK203_117313 [Vitis vinifera])

HSP 1 Score: 140.6 bits (353), Expect = 2.0e-29
Identity = 86/137 (62.77%), Postives = 93/137 (67.88%), Query Frame = 0


Query: 134 GAAALRHPIPLLSFPVDLTSRAASSCSGSEDERSSSDSEKSRKANCLLAGSCMSGNVHVR 193
           GAAAL HPIPLL F +DLT R A SCSGS +ERSSSDSEKSRKAN LL G CMSGNVHVR
Sbjct: 56  GAAALGHPIPLLYFAIDLTLRVAPSCSGSLNERSSSDSEKSRKANYLLVGRCMSGNVHVR 115

Query: 194 LCEKGGGQKWPCCTSLSSSMGSALFFGRVCQYDLNEVRGFASDIRWASGMDVDPSGRDNH 253
           L EKG G K     +   + G      R+   D  +  G  +  R  SGMDVDPSGRDNH
Sbjct: 116 LHEKGDGIKTLLYLTPIFNGGGVDTLTRIIG-DGYKNGGEVNSTRQHSGMDVDPSGRDNH 175

Query: 254 SGPGRGGDHSQEPKRLS 271
              GRGGDHSQEPKRLS
Sbjct: 176 FCLGRGGDHSQEPKRLS 191

[Close]

BLAST of Spg034695 vs. NCBI nr
Match: YP_009753040.1 (ribosomal protein L14 [Gerrardanthus macrorhizus] >QIT06112.1 ribosomal protein L14 [Gerrardanthus macrorhizus])

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-23
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]

BLAST of Spg034695 vs. NCBI nr
Match: YP_009430663.1 (ribosomal protein L14 [Gynostemma cardiospermum] >YP_010015175.1 ribosomal protein L14 [Gynostemma yixingense] >ART65099.1 ribosomal protein L14 [Gynostemma cardiospermum] >QOI14300.1 ribosomal protein L14 [Gynostemma yixingense])

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-23
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]

BLAST of Spg034695 vs. NCBI nr
Match: AHM88831.1 (ribosomal protein L14, partial [Lagenaria siceraria] >AHM91189.1 ribosomal protein L14, partial [Lagenaria siceraria])

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-23
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]

BLAST of Spg034695 vs. NCBI nr
Match: YP_009751858.1 (ribosomal protein L14 [Indofevillea khasiana] >QIT04591.1 ribosomal protein L14 [Indofevillea khasiana] >QJS52359.1 ribosomal protein L14 [Indofevillea khasiana])

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-23
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]

BLAST of Spg034695 vs. ExPASy Swiss-Prot
Match: Q8WKP4 (50S ribosomal protein L14, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl14 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-26
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]

BLAST of Spg034695 vs. ExPASy Swiss-Prot
Match: B1A971 (50S ribosomal protein L14, chloroplastic OS=Carica papaya OX=3649 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.8e-25
Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIK+ VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
            N
Sbjct: 72  NN 73

[Close]

BLAST of Spg034695 vs. ExPASy Swiss-Prot
Match: A4QJF1 (50S ribosomal protein L14, chloroplastic OS=Aethionema cordifolium OX=434059 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.4e-25
Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIK+ +PNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
            N
Sbjct: 72  NN 73

[Close]

BLAST of Spg034695 vs. ExPASy Swiss-Prot
Match: A4QJN5 (50S ribosomal protein L14, chloroplastic OS=Aethionema grandiflorum OX=72657 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.4e-25
Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIK+ +PNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
            N
Sbjct: 72  NN 73

[Close]

BLAST of Spg034695 vs. ExPASy Swiss-Prot
Match: P56792 (50S ribosomal protein L14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.4e-25
Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIK+ +PNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
            N
Sbjct: 72  NN 73

[Close]

BLAST of Spg034695 vs. ExPASy TrEMBL
Match: A0A438D6S1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_117313 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 9.7e-30
Identity = 86/137 (62.77%), Postives = 93/137 (67.88%), Query Frame = 0


Query: 134 GAAALRHPIPLLSFPVDLTSRAASSCSGSEDERSSSDSEKSRKANCLLAGSCMSGNVHVR 193
           GAAAL HPIPLL F +DLT R A SCSGS +ERSSSDSEKSRKAN LL G CMSGNVHVR
Sbjct: 56  GAAALGHPIPLLYFAIDLTLRVAPSCSGSLNERSSSDSEKSRKANYLLVGRCMSGNVHVR 115

Query: 194 LCEKGGGQKWPCCTSLSSSMGSALFFGRVCQYDLNEVRGFASDIRWASGMDVDPSGRDNH 253
           L EKG G K     +   + G      R+   D  +  G  +  R  SGMDVDPSGRDNH
Sbjct: 116 LHEKGDGIKTLLYLTPIFNGGGVDTLTRIIG-DGYKNGGEVNSTRQHSGMDVDPSGRDNH 175

Query: 254 SGPGRGGDHSQEPKRLS 271
              GRGGDHSQEPKRLS
Sbjct: 176 FCLGRGGDHSQEPKRLS 191

[Close]

BLAST of Spg034695 vs. ExPASy TrEMBL
Match: A0A218KG78 (50S ribosomal protein L14, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-24
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]

BLAST of Spg034695 vs. ExPASy TrEMBL
Match: A0A6H0ERW9 (50S ribosomal protein L14, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-24
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]

BLAST of Spg034695 vs. ExPASy TrEMBL
Match: G3ETT4 (50S ribosomal protein L14, chloroplastic OS=Cucumis melo subsp. melo OX=412675 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-24
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]

BLAST of Spg034695 vs. ExPASy TrEMBL
Match: A0A1X9Q175 (50S ribosomal protein L14, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl14 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-24
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKK VPNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKAVPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
           EN
Sbjct: 72  EN 73

[Close]

BLAST of Spg034695 vs. TAIR 10
Match: ATCG00780.1 (ribosomal protein L14 )

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-26
Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGARELMCIRIIGASNRRYAHIGDVIVAVIK+ +PNTPLERSEVIRAVIVRTCKELKR
Sbjct: 12  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAIPNTPLERSEVIRAVIVRTCKELKR 71

Query: 108 EN 110
            N
Sbjct: 72  NN 73

[Close]

BLAST of Spg034695 vs. TAIR 10
Match: AT5G46160.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 48.5 bits (114), Expect = 9.7e-06
Identity = 23/65 (35.38%), Postives = 42/65 (64.62%), Query Frame = 0


Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGA+++MCI+ +    ++ A +GD IVA +K+ +PN  +++  V+  V+VR   +  R
Sbjct: 58  DNSGAKKVMCIQAL--KGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAAMQRGR 117

Query: 108 ENDNE 113
            + +E
Sbjct: 118 VDGSE 120

[Close]

BLAST of Spg034695 vs. TAIR 10
Match: AT5G46160.2 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 48.5 bits (114), Expect = 9.7e-06
Identity = 23/65 (35.38%), Postives = 42/65 (64.62%), Query Frame = 0


Query: 48  DNSGARELMCIRIIGASNRRYAHIGDVIVAVIKKVVPNTPLERSEVIRAVIVRTCKELKR 107
           DNSGA+++MCI+ +    ++ A +GD IVA +K+ +PN  +++  V+  V+VR   +  R
Sbjct: 57  DNSGAKKVMCIQAL--KGKKGARLGDTIVASVKEAMPNGKVKKGAVVYGVVVRAAMQRGR 116

Query: 108 ENDNE 113
            + +E
Sbjct: 117 VDGSE 119

The following BLAST results are available for this feature:

BLAST of Spg034695 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW31126.1	2.0e-29	62.77	hypothetical protein CK203_117313 [Vitis vinifera]	[more]
YP_009753040.1	1.3e-23	98.39	ribosomal protein L14 [Gerrardanthus macrorhizus] >QIT06112.1 ribosomal protein ...	[more]
YP_009430663.1	1.3e-23	98.39	ribosomal protein L14 [Gynostemma cardiospermum] >YP_010015175.1 ribosomal prote...	[more]
AHM88831.1	1.3e-23	98.39	ribosomal protein L14, partial [Lagenaria siceraria] >AHM91189.1 ribosomal prote...	[more]
YP_009751858.1	1.3e-23	98.39	ribosomal protein L14 [Indofevillea khasiana] >QIT04591.1 ribosomal protein L14 ...	[more]

BLAST of Spg034695 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8WKP4	1.7e-26	98.39	50S ribosomal protein L14, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl14 PE=...	[more]
B1A971	1.8e-25	95.16	50S ribosomal protein L14, chloroplastic OS=Carica papaya OX=3649 GN=rpl14 PE=3 ...	[more]
A4QJF1	2.4e-25	93.55	50S ribosomal protein L14, chloroplastic OS=Aethionema cordifolium OX=434059 GN=...	[more]
A4QJN5	2.4e-25	93.55	50S ribosomal protein L14, chloroplastic OS=Aethionema grandiflorum OX=72657 GN=...	[more]
P56792	2.4e-25	93.55	50S ribosomal protein L14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=rpl1...	[more]

BLAST of Spg034695 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438D6S1	9.7e-30	62.77	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_117313 PE=4 SV=1	[more]
A0A218KG78	6.1e-24	98.39	50S ribosomal protein L14, chloroplastic OS=Cucumis sativus var. hardwickii OX=3...	[more]
A0A6H0ERW9	6.1e-24	98.39	50S ribosomal protein L14, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=r...	[more]
G3ETT4	6.1e-24	98.39	50S ribosomal protein L14, chloroplastic OS=Cucumis melo subsp. melo OX=412675 G...	[more]
A0A1X9Q175	6.1e-24	98.39	50S ribosomal protein L14, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl14 PE=...	[more]

BLAST of Spg034695 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00780.1	1.7e-26	93.55	ribosomal protein L14	[more]
AT5G46160.1	9.7e-06	35.38	Ribosomal protein L14p/L23e family protein	[more]
AT5G46160.2	9.7e-06	35.38	Ribosomal protein L14p/L23e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000218	Ribosomal protein L14P	SMART	SM01374	Ribosomal_L14_2	coord: 37..143 e-value: 9.7E-13 score: 58.3
IPR000218	Ribosomal protein L14P	PFAM	PF00238	Ribosomal_L14	coord: 45..109 e-value: 2.9E-18 score: 66.1
IPR000218	Ribosomal protein L14P	PANTHER	PTHR11761	50S/60S RIBOSOMAL PROTEIN L14/L23	coord: 47..110
IPR036853	Ribosomal protein L14 superfamily	GENE3D	2.40.150.20	Ribosomal protein L14	coord: 24..113 e-value: 3.4E-21 score: 77.3
IPR036853	Ribosomal protein L14 superfamily	SUPERFAMILY	50193	Ribosomal protein L14	coord: 45..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..270
None	No IPR available	PANTHER	PTHR11761:SF28	RIBOSOMAL PROTEIN L14B/L23E-RELATED	coord: 47..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg034695.1	Spg034695.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome