Spg034553 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg034553
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold4: 13224404 .. 13227819 (+)
RNA-Seq ExpressionSpg034553
SyntenySpg034553
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGCAAAGAGCTCCCACATTTTCTTTAAGCGGATATCACTAATCACGGCTGGAAACGGTTGTGCGCAAAGCTGGATCCCACTGTTGATCAACTAGAATGGGAGTTCTACGCCAACATCGATGAAAATGAATGATTCTTGGTTATTGTTCGTAGAGTTGTTGTCGAATGGAGCCTTGGAGTGATTAATTCTCTATTTAATTTGCAAGACTTCCTCCACGCTGTTTTCAACGAAATATTCGTTGCTTCCTCAAATGAGCAACTAAATGCCCAGTGGAGGTTGTCTAGGATGAGGGCAAGAACATTCCAGTCACCATACCTGAAATGTGAGGCTAACACTTGGCTCAGCTTTGTCAAGCAGAGATTATTGCCTACAACGTACGCCTCCACTATCCCCCGTGATCGAGTGCACTTGAAGGTTCAGAGTCCCAAAGAGTTCAAATGATATAAACTTGTTTGTTAAGGGGATTATTGACACTGCCAATCTGGCTAGGCTTCAGAGAGGTGAGTCGCACCAGGTGGTTTGTTGTGAGGTGTCCATAAAGTGCTAGAGCAGCTTGAGATGGTTCTCAGGAGGCTAGAATTTACTGAGAGACAACTTCAAACCTACTAGAGTTATGATCTTAAAAGGGACACCACACTAAGGAGGGCTATGCAAGCGAATTTTTCTAAACTATATCAAGCCTTCCAAATTTTCCTTGATGACCCATGCATTCCACCCTCGCCCATCATTCAAGAGGAAGAAGAAAACCCAGAGCCTGAACATAAAGAAGAATTAAAGGGAAGTCTCAGTTTCATCGAGCAAATATTTTGATGAATGATTTTATGTGCTCGTCCTGCTTGTGTTTTGTTCTTTCTGCTTATGTTATGTTACGATTCTTTGTTTTTATCTGTTGCTTTAAAATCTATCTCTTTCATGATTACGTAAATCGGTGATCTTGATCTTTAATGAAATCAAATATTGTTTTGTTTGGCACATCTGAGTATCTAACATAATTTTCTTCTGAATTTTTGAAGCTTAGACTAGTTAGCTTAATTAGATCAAGGTGTTCTGATCTCCAGAAACCTTTTGCTTGAGCATTCCTTCTAGCCTAGTCATGACTACAGCAAAAGTTCTGAGGTAGCATTGTCTTATTCAATCCACCTTAAGCTGAATCTTAGTCCCACGCTTAGTTTAAAATTCAGATAGAAAAAAATTAAGTTTGAGGGTATACTTATCATGTTGCTAATTCATTGGGGACAATGAATAATTTAAGTTTGGGGGACTTTTAGCTACTCCGCTTGTTTTGCCTGAACATTCCTCTCCTTCATAATTATTTTTCTAGGTTGTTGAGTAACCAGGGACATTTCTGACACCCACAGTTTGTCTTTGCGTCAAAAGATGACCTAGGAAATATTGGAAAAAGGATCAAAATTATTTGTTCAAAAGAAAAATTTTGGAAAATTTTGCTGAGAAAATTCATAGAGCAAAAATTTTGAAGGATGAATGATAATCTAGCAGTTTTCTGTCTCCCAGGGCTTAGGTGAGCTTCATCATAAAATGTCGTCATTCTGAGAAGCAATGGATAGAATAACTAAGGATTTTTAGGTTTAACAATGAGTATTTAGCCTAGTTGGTGATAAGTTTGAGGCAAGGGTATACTGCACCATAAAATGGGTCATTCCCTGCTTAAGAGCTTATGACTGTAGAGCTGCTTTAAGTCTAAAGAACAAAAGAATAAAACCCCTTAAAAATGTGTTTAAATATGTCTGATAATAGAGCTAGGTTGTGGTAAGTTCTTAGGATTGAGTTAAAGGTGGTGATTATTTGCTCAATGTTGAAAGAATTATTTTGCTGCAGCAGTGCTTGGTTTTGCAGGATGATCAGGTAAAGGTTGAAGGTAGTGTTAGAATATCTGTTCTAATTGAGTTATACTTTGTCTAATGTTTTGAATTCTCAAGGGAAGATTAGTTAGTATTGCTCGGGACGCGCAATAGTTCAAGTTTGGGGGTATGATAACTCTCCAAAAGGGAGTTATTTAGGCCTTAGTTCTATAGTATTTTGTGTGTCATTTGTGTTAAATAGGGTTGCTTCTAGATGAATATTATATGTTTAACCCATTTGGAAGAATGGAGGCTTTGGAAGTTATTTTGTGCAGAAAATATTGCTGAGCGACTTGAAGGAGCAAAATCTGTGATCCAGCAAAGCAGGGAGCAAAACTGCCACGTAACAGCTCGTAATCCATTTTAATAAAGTGGCGTTAGCTTAATTAATTACGGATCTAAGAAGCTTTGAAAGCCTGCCACGTGTCCAATTTAACCTAATTAGGTTAAACCTCATCTTATAAAAGGAGGAGCCGTCAAAGATACATTCATTCACGACTTGGAGACCGAATCAATCGGCCATAGGCCGAATTGACGGATGAATGGAGATCTAAGAAGACCATTTGCTATTCTTCTCAAGAAGACGAAGTTCTTCCATGTTCTTGGTGGTTTGGAGCAGCCGTTTCATCTCCCAAATTACTAAAAGGATTAGTATTTCTTGTGCAATTCGTATTATGGATGTGCTTATTGAGATTGTAACGTGTTTTATGTTTTCAATCATGAACTAATTGCTGGGTTAAGAATTATGTGATTGTTATATTTATAAAATCTGGAAATTCTATTTGATTATGATCATCTTGAGTTATTGTTGTTCTTCAATTTCATTATGTGCCCGCCTAGCTAGCCGGTATGTATAGCTTCTCCTAGTTTTAGGGATGATTTAGGAGTTGTGTGGCGATAATTCACGTTAGACCATTATGTGTTGGTGAACGCCAGTAGTTGAACTAGGGATAGTCAATTGCCTAACGCTTGATCGGTAGAGCTTCATTGGAGTTGAAACATATTCCAAAAAATCTGGAGTTCCGGGAGGATCCCGCTGATAATACTGCATGAGATTGACTGATCAAAAGAATTGCTGGATCATTTTTATAAAGAATTACAGAAGTCTTAACCTGTGTCTGCTTCCATTCTGTTTTCTCTAGTTGTAATCATTTACTGTTTTCGTATTTCTATTGTTTCAGCATTTTACAAACCCAATCAATTTAACCAACCTTTTGAAATCACTAAAAAGGCAAATTAAATCAATAGAGGTAGACATTTCAAGACCCTGTGGATACGATAAATACTTATCACTTGCTGTAGATTGTGTATACTTGGACGGTATTTTGAGGTGAATTCTATCTATATTTTTAACCACTTTAGAATTGCAACAATCACCAAGCTCTATAGGCTTGCAGGAGTAGAGCCAGAAGAAAAAGAAGCCGCCCGGACATCAATTGACTTGAGCTTGATAAAGAAGCTCATAGCCAACTCCAAGAAAAAGGTGACTTCTCCAGAGAAGAAGGCTCAAGCAACCCCTCCTGCAACTCAAGTGTCAAAGCCTCCAGAGTAG

mRNA sequence

ATGATGGCAAAGAGCTCCCACATTTTCTTTAAGCGGATATCACTAATCACGGCTGGAAACGGTTGTGCGCAAAGCTGGATCCCACTAGTTGTTGTCGAATGGAGCCTTGGAGTGATTAATTCTCTATTTAATTTGCAAGACTTCCTCCACGCTGTTTTCAACGAAATATTCGTTGCTTCCTCAAATGAGCAACTAAATGCCCAGTGGAGGTTGTCTAGGATGAGGGCAAGAACATTCCAGTCACCATACCTGAAATGTGAGGCTAACACTTGGCTCAGCTTTGTCAAGCAGAGATTATTGCCTACAACGTACGCCTCCACTATCCCCCGTGATCGAGTGCACTTGAAGCAGTGCTTGGTTTTGCAGGATGATCAGGTAAAGGTTGAAGGTAGTGTTAGAATATCTGTTCTAATTGAATTGTGTATACTTGGACGGTATTTTGAGGTGAATTCTATCTATATTTTTAACCACTTTAGAATTGCAACAATCACCAAGCTCTATAGGCTTGCAGGAGTAGAGCCAGAAGAAAAAGAAGCCGCCCGGACATCAATTGACTTGAGCTTGATAAAGAAGCTCATAGCCAACTCCAAGAAAAAGGTGACTTCTCCAGAGAAGAAGGCTCAAGCAACCCCTCCTGCAACTCAAGTGTCAAAGCCTCCAGAGTAG

Coding sequence (CDS)

ATGATGGCAAAGAGCTCCCACATTTTCTTTAAGCGGATATCACTAATCACGGCTGGAAACGGTTGTGCGCAAAGCTGGATCCCACTAGTTGTTGTCGAATGGAGCCTTGGAGTGATTAATTCTCTATTTAATTTGCAAGACTTCCTCCACGCTGTTTTCAACGAAATATTCGTTGCTTCCTCAAATGAGCAACTAAATGCCCAGTGGAGGTTGTCTAGGATGAGGGCAAGAACATTCCAGTCACCATACCTGAAATGTGAGGCTAACACTTGGCTCAGCTTTGTCAAGCAGAGATTATTGCCTACAACGTACGCCTCCACTATCCCCCGTGATCGAGTGCACTTGAAGCAGTGCTTGGTTTTGCAGGATGATCAGGTAAAGGTTGAAGGTAGTGTTAGAATATCTGTTCTAATTGAATTGTGTATACTTGGACGGTATTTTGAGGTGAATTCTATCTATATTTTTAACCACTTTAGAATTGCAACAATCACCAAGCTCTATAGGCTTGCAGGAGTAGAGCCAGAAGAAAAAGAAGCCGCCCGGACATCAATTGACTTGAGCTTGATAAAGAAGCTCATAGCCAACTCCAAGAAAAAGGTGACTTCTCCAGAGAAGAAGGCTCAAGCAACCCCTCCTGCAACTCAAGTGTCAAAGCCTCCAGAGTAG

Protein sequence

MMAKSSHIFFKRISLITAGNGCAQSWIPLVVVEWSLGVINSLFNLQDFLHAVFNEIFVASSNEQLNAQWRLSRMRARTFQSPYLKCEANTWLSFVKQRLLPTTYASTIPRDRVHLKQCLVLQDDQVKVEGSVRISVLIELCILGRYFEVNSIYIFNHFRIATITKLYRLAGVEPEEKEAARTSIDLSLIKKLIANSKKKVTSPEKKAQATPPATQVSKPPE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..221

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg034553.1Spg034553.1mRNA