Spg034549 (gene) Sponge gourd (cylindrica) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCAAGTTATCCTCGATTAAGTTGATTTTAGAAGATTGGAATCCTAATGTTTCGGGGATTTCAAGAAAGAAGCAACTATTCAAGAGTTATGAAATGAAGCATCCAGTATTTGGGGCTATGGTTTGTAACGAAGGCTTACAATGCTTGATTCCCGAGGCTTTTTCCTCTGCCCTCAGAAAAAAGCAATGATGACGCACTTGTTTTTTTGTTTTCACCGTCCTCTCTACCACCATTTTTCTGCGGAATATATTGTTTTGGATTATGAAAGTAACAAGCAGATTTTTAATTTCAAATCCCAACTGACCTGAGTTTTCTTATTTTGATGTTCATTTTAGAGACAAAATAGTTATCAAATAATGTTCATATATTTTCTTATTGTGATTTTATTCATTATACATTGAAGTGTCAAGTGGTGGTTCACTGGTTATCATTGGCGTAATCTAGTGCACCTACAAAGATCTGAAGCTTTCTTGATAGAGAAGAACGAAATTCGTTTTTTTTTTTTTGTTCAATGGAAAAAATACCATTGCTGTTAAAAATGCCATTGCTGTTGTACAAACAAGTCATATTTTCAAGACGTAATTAATATTAACATCAACACCATATCCTATAACCTCTGAATCATCAGTGGCTAAAATATTGAAATAAAATATAAAACCAGTGACTTTTTACTCGAATACTGGGATATATTGGTCGATGTGTCTTACTTACATTGTGGCAGAAGTTACAAACTGTAAGCAGGCCGACATTGACTTCCGAGGGCATGAGGAGATCTACTCTGAACCTGGTGGAGTAATGGACTATGAAGAAGATCGAAGTCGACCAAAGAGGTAATATTTCACCTTCTTATGCTGCATCTAAGAAATGTTAAAATGTTTAAAACCATTAGGTTGAACTATAAGTTTGATCCTTGAGCTGTATCTATTTAGTAGGTCCATGGATTTTGAGGGTCTGTCTTTTTGGTTCCTACAAGGATATAAGTGTTAATCTAACCGCGTTAACATAAGGAGTCCATTAGACATAAAATTGAAAGTTCAATGTCCTTTTAGAAACCTTTTAGAACATAGGGACTGAATAGACACAACTTCTAGAACTGCATTTATAAAAGGCTTTTTGAACATACGGTAGAGTTAGAGTTCTAATTTTTTCCGAAATTGTACGTACAGGAGACGACATCCAATTTCTTAGAGACGTGCATATGGGAGTTGAACTACAACCTCCTTTAAGGTTGGGTGTCTAAACAACTGCCTGATTTTTGTTCGTGGCAAAAAAAAAGAAAAAAAAGACAGATGATCTCCCTAAGCCTTTTCTTAGAATGGTGAACATGTTGCTTTAGGTTCCTGTCTGGTAAACAGTAGATGTGCAAGTTATCCTCGATTAAGTTGATTTTAGAAGATTGGAATCCTAATGTTTCGGGGATTTCAAGAAAGAAGCAACTATTCAAGAGTTATGAAATGAAGCATCCAGTATTTGGGGCTATGGCCGACATTGACTTCCGAGGGCATGAGGAGATCTACTCTGAACCTGGTGGAGTAATGGACTATGAAGAAGATCGAAGAGACGACATCCAATTTCTTAGAGACGTGCATATGGGAGTTGAACTACAACCTCCTTTAAGGTTCCTGTCTGGTAAACAGTAG ATGTGCAAGTTATCCTCGATTAAGTTGATTTTAGAAGATTGGAATCCTAATGTTTCGGGGATTTCAAGAAAGAAGCAACTATTCAAGAGTTATGAAATGAAGCATCCAGTATTTGGGGCTATGGCCGACATTGACTTCCGAGGGCATGAGGAGATCTACTCTGAACCTGGTGGAGTAATGGACTATGAAGAAGATCGAAGAGACGACATCCAATTTCTTAGAGACGTGCATATGGGAGTTGAACTACAACCTCCTTTAAGGTTCCTGTCTGGTAAACAGTAG MCKLSSIKLILEDWNPNVSGISRKKQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDRRDDIQFLRDVHMGVELQPPLRFLSGKQ Homology
BLAST of Spg034549 vs. NCBI nr
Match: XP_022959597.1 (COP9 signalosome complex subunit 7-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 62.8 bits (151), Expect = 1.8e-06 Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0
BLAST of Spg034549 vs. NCBI nr
Match: XP_023513464.1 (COP9 signalosome complex subunit 7-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 62.8 bits (151), Expect = 1.8e-06 Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0
BLAST of Spg034549 vs. NCBI nr
Match: KAG6592933.1 (COP9 signalosome complex subunit 7, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 62.8 bits (151), Expect = 1.8e-06 Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0
BLAST of Spg034549 vs. NCBI nr
Match: XP_002273686.1 (PREDICTED: COP9 signalosome complex subunit 7 isoform X1 [Vitis vinifera] >XP_034709491.1 COP9 signalosome complex subunit 7 isoform X1 [Vitis riparia] >CBI16662.3 unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 62.4 bits (150), Expect = 2.4e-06 Identity = 31/55 (56.36%), Postives = 37/55 (67.27%), Query Frame = 0
BLAST of Spg034549 vs. NCBI nr
Match: XP_010661395.1 (PREDICTED: COP9 signalosome complex subunit 7 isoform X2 [Vitis vinifera] >XP_034709492.1 COP9 signalosome complex subunit 7 isoform X2 [Vitis riparia]) HSP 1 Score: 62.4 bits (150), Expect = 2.4e-06 Identity = 31/55 (56.36%), Postives = 37/55 (67.27%), Query Frame = 0
BLAST of Spg034549 vs. ExPASy Swiss-Prot
Match: Q94JU3 (COP9 signalosome complex subunit 7 OS=Arabidopsis thaliana OX=3702 GN=CSN7 PE=1 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 8.9e-04 Identity = 21/54 (38.89%), Postives = 31/54 (57.41%), Query Frame = 0
BLAST of Spg034549 vs. ExPASy TrEMBL
Match: A0A6J1H4Z6 (COP9 signalosome complex subunit 7-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460626 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 8.9e-07 Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0
BLAST of Spg034549 vs. ExPASy TrEMBL
Match: D7SLY4 (PCI domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g01580 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.2e-06 Identity = 31/55 (56.36%), Postives = 37/55 (67.27%), Query Frame = 0
BLAST of Spg034549 vs. ExPASy TrEMBL
Match: A0A6J1KS55 (COP9 signalosome complex subunit 7-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498167 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.6e-06 Identity = 29/55 (52.73%), Postives = 38/55 (69.09%), Query Frame = 0
BLAST of Spg034549 vs. ExPASy TrEMBL
Match: A9PEE7 (PCI domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G047200 PE=2 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 4.4e-06 Identity = 30/55 (54.55%), Postives = 35/55 (63.64%), Query Frame = 0
BLAST of Spg034549 vs. ExPASy TrEMBL
Match: A0A6M2EVG6 (PCI domain-containing protein OS=Populus davidiana OX=266767 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 4.4e-06 Identity = 30/55 (54.55%), Postives = 35/55 (63.64%), Query Frame = 0
BLAST of Spg034549 vs. TAIR 10
Match: AT1G02090.1 (Proteasome component (PCI) domain protein ) HSP 1 Score: 44.3 bits (103), Expect = 6.3e-05 Identity = 21/54 (38.89%), Postives = 31/54 (57.41%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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