Spg034081 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAACACAAAATTTAATTTCTTTGTTGCTTCCAACTATATAAAATTGTCAAGCAAAAGATTGTTGGAATCAGCAATTTCTGACCGACGCAGGGCTGTTCCAAACTTCCTGGACTTCCTTTGCCGTCTTTCTCAACTAACCGTGAGCTGACCAACAACCTCCGACGCCACCTCCTTCTTCTTCTTCTTCTTCTTCCTCTTTTTAACTTCTCCATATCATTTCTCTCTCTCTCTCCCCAAATTCACAGCTCCCATAGAAACAGATCAAAATGGCCATGGCCACCACCTGTTGCCTCAACAACCTCAATCCGCCGCCACCGTTGCCGGAAAAGTCCCACTCTCTTTCCCCCACACCCACCCACAATCAATTCGTTCCATGGTAAGTATAAAGTTGCCACATTTATGAGCTTTCAATTTTCATCTTTGGTCTTCTTTTTTCTACCCGGTGGAGGATTTGATACTTTAACCTCTTTGTCTTTGCAAAATTATAACAGAGTCGAAACCTTTTTAACACAAATTACGACTACATTTAAAGAAATTTATGATTGGGTGGGCAGGAACAGTAATGGAAATGAAGGATGGTGGCAAAAGCGGTGCGTTTTGGGAATGGCCGGAGCGGCAATGGCGCTGCAAATAATGGTTGGAGAAAGCGGTGGAATAGAAATGGGAAGTAATATTAATTTTGTTGATTCGAGAAAATGGAGCGAAGAAAGAATGTGTCCACAGTGGCGGCTCAATTCCCTCGAAACCATCGTGCCGGAGAATCTTCCGAGGCCGGCCGGCCGCCGCAGATGGGAGCCCGCCGCCCTTCCTCACACGGCGCCTCAACTTCGAACCACACATATAATTTCCCCTTCTACTCGCTGCTTCTCCATGTAATGAACAAACACACAATTCACCAATTGTTTAATATCATTTTACAATATTACATTCCAATAAAGGATAATATATTTTTTTATGGTAAATTGTAAAAATGGTAGTTGTAATAATTAC ATGGCCATGGCCACCACCTGTTGCCTCAACAACCTCAATCCGCCGCCACCGTTGCCGGAAAAGTCCCACTCTCTTTCCCCCACACCCACCCACAATCAATTCGTTCCATGGAACAGTAATGGAAATGAAGGATGGTGGCAAAAGCGGTGCGTTTTGGGAATGGCCGGAGCGGCAATGGCGCTGCAAATAATGGTTGGAGAAAGCGGTGGAATAGAAATGGGAAGTAATATTAATTTTGTTGATTCGAGAAAATGGAGCGAAGAAAGAATGTGTCCACAGTGGCGGCTCAATTCCCTCGAAACCATCGTGCCGGAGAATCTTCCGAGGCCGGCCGGCCGCCGCAGATGGGAGCCCGCCGCCCTTCCTCACACGGCGCCTCAACTTCGAACCACACATATAATTTCCCCTTCTACTCGCTGCTTCTCCATGTAA ATGGCCATGGCCACCACCTGTTGCCTCAACAACCTCAATCCGCCGCCACCGTTGCCGGAAAAGTCCCACTCTCTTTCCCCCACACCCACCCACAATCAATTCGTTCCATGGAACAGTAATGGAAATGAAGGATGGTGGCAAAAGCGGTGCGTTTTGGGAATGGCCGGAGCGGCAATGGCGCTGCAAATAATGGTTGGAGAAAGCGGTGGAATAGAAATGGGAAGTAATATTAATTTTGTTGATTCGAGAAAATGGAGCGAAGAAAGAATGTGTCCACAGTGGCGGCTCAATTCCCTCGAAACCATCGTGCCGGAGAATCTTCCGAGGCCGGCCGGCCGCCGCAGATGGGAGCCCGCCGCCCTTCCTCACACGGCGCCTCAACTTCGAACCACACATATAATTTCCCCTTCTACTCGCTGCTTCTCCATGTAA MAMATTCCLNNLNPPPPLPEKSHSLSPTPTHNQFVPWNSNGNEGWWQKRCVLGMAGAAMALQIMVGESGGIEMGSNINFVDSRKWSEERMCPQWRLNSLETIVPENLPRPAGRRRWEPAALPHTAPQLRTTHIISPSTRCFSM Homology
BLAST of Spg034081 vs. NCBI nr
Match: XP_022997474.1 (uncharacterized protein LOC111492380 [Cucurbita maxima]) HSP 1 Score: 214.9 bits (546), Expect = 4.4e-52 Identity = 111/143 (77.62%), Postives = 117/143 (81.82%), Query Frame = 0
BLAST of Spg034081 vs. NCBI nr
Match: XP_038884319.1 (uncharacterized protein LOC120075190 [Benincasa hispida]) HSP 1 Score: 212.2 bits (539), Expect = 2.9e-51 Identity = 108/145 (74.48%), Postives = 117/145 (80.69%), Query Frame = 0
BLAST of Spg034081 vs. NCBI nr
Match: KAG6598839.1 (Pleiotropic drug resistance protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 209.5 bits (532), Expect = 1.9e-50 Identity = 110/144 (76.39%), Postives = 118/144 (81.94%), Query Frame = 0
BLAST of Spg034081 vs. NCBI nr
Match: XP_023547232.1 (uncharacterized protein LOC111806106 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 209.5 bits (532), Expect = 1.9e-50 Identity = 111/144 (77.08%), Postives = 117/144 (81.25%), Query Frame = 0
BLAST of Spg034081 vs. NCBI nr
Match: XP_022929729.1 (uncharacterized protein LOC111436227 [Cucurbita moschata]) HSP 1 Score: 207.6 bits (527), Expect = 7.1e-50 Identity = 109/144 (75.69%), Postives = 117/144 (81.25%), Query Frame = 0
BLAST of Spg034081 vs. ExPASy TrEMBL
Match: A0A6J1KBE7 (uncharacterized protein LOC111492380 OS=Cucurbita maxima OX=3661 GN=LOC111492380 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.1e-52 Identity = 111/143 (77.62%), Postives = 117/143 (81.82%), Query Frame = 0
BLAST of Spg034081 vs. ExPASy TrEMBL
Match: A0A6J1EPL8 (uncharacterized protein LOC111436227 OS=Cucurbita moschata OX=3662 GN=LOC111436227 PE=4 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 3.4e-50 Identity = 109/144 (75.69%), Postives = 117/144 (81.25%), Query Frame = 0
BLAST of Spg034081 vs. ExPASy TrEMBL
Match: A0A1S3BBI5 (uncharacterized protein LOC103488267 OS=Cucumis melo OX=3656 GN=LOC103488267 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 6.1e-47 Identity = 103/146 (70.55%), Postives = 117/146 (80.14%), Query Frame = 0
BLAST of Spg034081 vs. ExPASy TrEMBL
Match: A0A5A7VGF0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002860 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.3e-46 Identity = 102/146 (69.86%), Postives = 117/146 (80.14%), Query Frame = 0
BLAST of Spg034081 vs. ExPASy TrEMBL
Match: A0A0A0LLU6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379360 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 6.7e-46 Identity = 102/145 (70.34%), Postives = 110/145 (75.86%), Query Frame = 0
BLAST of Spg034081 vs. TAIR 10
Match: AT2G25625.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.6 bits (166), Expect = 4.8e-12 Identity = 47/132 (35.61%), Postives = 62/132 (46.97%), Query Frame = 0
BLAST of Spg034081 vs. TAIR 10
Match: AT2G25625.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10 Identity = 49/133 (36.84%), Postives = 63/133 (47.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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