Spg033365 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg033365
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Isoleucine--tRNA ligase
Location	scaffold5: 2383680 .. 2386059 (-)
RNA-Seq Expression	Spg033365
Synteny	Spg033365

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGGTGGATCGGTGGATGCAGACCAGGGTCCGAATTCTTGGTTTCAATCTGGAGTTGAAATCTTTGCCGCGATGCTAATCGGAACCATAATCGCACCTCGTAGCTTTTTCTCGAGAAACAAACAAAAATCATCTTCGTCCTCATCGTCTTCTTCTTCTGCGTTCAACTGCTCGCCGGTGATTCCTCTGTGCTCGGGGAGAAGGCCTAAAGATCCACGAAAAGATGATGAAAATGATGATCAGACACGTATGGCATCGGTATCCTTTTCTCTCATTTACTGATTTAAAGTCTGATTCTGATTTGTGAGCTCTGCTTCGTTGATGATCTCTCTAGCTACTTTGAATTTAAGTTTGAGATGCGAGGGAGAGAGGCAAGAATCAACTGGAAACTCTTTCTTGAGAAACTACTCGAAATGGCTCAGAGGCTGAAAGTAAATTAGTGTTGAGAAATGTTTTCCGTCTTTTGCCGCCATTTTGAGTTTAATCGGAGGAATTTAGAACGGAGTTACGAGCTGGTGTTGAGATCTAGATTTCCGTTTCGTCTATCATTAGGTTTAGGATTTGATTTCATCTGTTCTGAGAATTAGGTAGTTGCCGATGAAGGCCTTTAACTAATTCTCTCGTCGATAAAAGGATCCTTGCATCCAAATTACAGGGAAAACTCGGTAAATCAAGATGAATAGCTTTCCATCTCCGAATAGCCAAATCAATAAAAGTATGATAATGCTCTTGATCAAAATTCTTTTCAATGCAGTAATAAGCTTTGGCTTGATAATGCTCTTGATCGTCAGATAAAGGCATATAGCTTCCAATTTGCCTGCTCTAACTTTTGAGAAGCTCACTCTCCTGAATATGTCTTGACACGATGCCCAACAGCATTTCTCTTGTCCCCTTGATTCTGAACGAGAGTCAGTCTACTAAATGATTAAGAGTAACATGTTCTAGCATTTTTAGTTAGACTAATAGCCAATTGGCTATTTTTTATTGTGAAGGTTGTTGAGGAAGAGGTAACAACCAGGTATTATTTTTAGTATTATCAGCTAGCTTTTAAAGCATTAGATCATCAAGAGAAGTAAAAGGATTCAACTGCCACGTTTGTTTATATATAAGTATAAATATAACTTCAAAATTTGAATCTTCTGTATTATTTTTTCTTTTGGTGAGGGTTCGCCCCATCCGAGATTCATTTCAAGAGACAACAAGAGTTTTAAATGATTTGAGTTCAAGACCAAGGATATTTCGAAACATCCAAGCCCTTACATTTGAACACCATTGGAAGCTAAGAAGCACAAACACTTTATGACACATGTTGCACACTTGTCAGTACACTAGTTGTACAAAGTCAATGTAGGTCTATTATTTGTGAGACACATATCAAACACTAATAATATAGGACAAAAATAATAAATTTTGAGAGTGAAATACATCAAACTCATTTTTTCAAGCATATAAATGCATAAGCTTATAGACTTTGAATTTCCTTGTATAAAAATATATATATTTTAATAAACATGTCTATGCCATGTCTGTGTCCTAAATTTAAAACAAATGACGTGTCACCGTATTCATGTTATGTAGTATCCATGTTTATTGTGCTTCTTAGGTTAGGAGTAACTCGAGTACTTTTAAAATGCTCTAGGATCAAGTTTATGTTTAACATTGACTTAAAAGTAAATGTTTCCAATGTCACTTTACATTGGCCTGGCCTTTTTTTGGGGCCAAGGAGTCCACTGCCTGTGAAGTTTTCCAGTAGGGAGATGATAAGGAAATTGCAAGCCATGAAGTTAAACTACAATTTGTTGAATCATATCAAAGATCTCATAAACACTTTGCATCATTGATTACCAATTATGTCAATCAGGTGATAAGCCCTCAACAGATTGGGACAAGGCCTGGTCGAAGTTTCGAAAGCGAGGAAAAAAGACGATCTTCTCCGATTTCTCTCCAGACAAATATGTAAGCTGGAATCCGCGAAGGTCGGATTATCCATTGTCTGAAGAAGTAGACCCCATCAAAAGAACAGAGAGATCAAATCTGATGCTGTGGACTAGTCCAAGATTTACTCTGGCAGGTGCAATTGTAATTGTCACACTTCTGTTGGTCTATACAATTCTTGCACCAATTAATAAGTGATTTTTGCTGGGGTATCGAAGTTCTGGTTCTAACTGGCTTCTTCTTCTATTGATGTTAATGATTGTAAAATGGGAGTTCAGTTGAGGAAGGTCTGTAAATTTGTTTTGGAAATTCAATGGAATCTGTGTTCTATGTTTTGCTTGCATTCTCTGCTAAAAATTATCTTTGAAAATTACTCCTAAACAGCCTCTAAAAGATTTTATCCATCTAATGTGATGAGGTTGAGGATTTGTTGAATAATTAAAAT

mRNA sequence

GTGGGTGGATCGGTGGATGCAGACCAGGGTCCGAATTCTTGGTTTCAATCTGGAGTTGAAATCTTTGCCGCGATGCTAATCGGAACCATAATCGCACCTCGTAGCTTTTTCTCGAGAAACAAACAAAAATCATCTTCGTCCTCATCGTCTTCTTCTTCTGCGTTCAACTGCTCGCCGGTGATTCCTCTGTGCTCGGGGAGAAGGCCTAAAGATCCACGAAAAGATGATGAAAATGATGATCAGACACGTATGGCATCGGTTAGGAGTAACTCGAGTGATAAGCCCTCAACAGATTGGGACAAGGCCTGGTCGAAGTTTCGAAAGCGAGGAAAAAAGACGATCTTCTCCGATTTCTCTCCAGACAAATATGTAAGCTGGAATCCGCGAAGGTCGGATTATCCATTGTCTGAAGAAGTAGACCCCATCAAAAGAACAGAGAGATCAAATCTGATGCTGTGGACTAGTCCAAGATTTACTCTGGCAGGTGCAATTGTAATTGTCACACTTCTGTTGGTCTATACAATTCTTGCACCAATTAATAAGTGA

Coding sequence (CDS)

GTGGGTGGATCGGTGGATGCAGACCAGGGTCCGAATTCTTGGTTTCAATCTGGAGTTGAAATCTTTGCCGCGATGCTAATCGGAACCATAATCGCACCTCGTAGCTTTTTCTCGAGAAACAAACAAAAATCATCTTCGTCCTCATCGTCTTCTTCTTCTGCGTTCAACTGCTCGCCGGTGATTCCTCTGTGCTCGGGGAGAAGGCCTAAAGATCCACGAAAAGATGATGAAAATGATGATCAGACACGTATGGCATCGGTTAGGAGTAACTCGAGTGATAAGCCCTCAACAGATTGGGACAAGGCCTGGTCGAAGTTTCGAAAGCGAGGAAAAAAGACGATCTTCTCCGATTTCTCTCCAGACAAATATGTAAGCTGGAATCCGCGAAGGTCGGATTATCCATTGTCTGAAGAAGTAGACCCCATCAAAAGAACAGAGAGATCAAATCTGATGCTGTGGACTAGTCCAAGATTTACTCTGGCAGGTGCAATTGTAATTGTCACACTTCTGTTGGTCTATACAATTCTTGCACCAATTAATAAGTGA

Protein sequence

VGGSVDADQGPNSWFQSGVEIFAAMLIGTIIAPRSFFSRNKQKSSSSSSSSSSAFNCSPVIPLCSGRRPKDPRKDDENDDQTRMASVRSNSSDKPSTDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSPRFTLAGAIVIVTLLLVYTILAPINK

Homology

[Close]

BLAST of Spg033365 vs. NCBI nr
Match: XP_038906326.1 (uncharacterized protein LOC120092168 [Benincasa hispida])

HSP 1 Score: 259.2 bits (661), Expect = 2.6e-65
Identity = 140/157 (89.17%), Postives = 143/157 (91.08%), Query Frame = 0


Query: 25  MLIGTIIAPRSFFSRNKQKSSSSSSSSSSAFNCSPVIPLCSGRRPKDPRKDDENDDQTRM 84
           MLIGTIIAPRSFFSRNKQKSSSSSSSSSS+   SPVIPLCSGRRPKDPRKDD+NDDQTR 
Sbjct: 1   MLIGTIIAPRSFFSRNKQKSSSSSSSSSSS---SPVIPLCSGRRPKDPRKDDDNDDQTR- 60

Query: 85  ASVRSNSSDKPSTDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRSDYPLSEEVDPIKR 144
                   DK STDWDKAWSKFRKRGKKTIFSDFSP+KYVSWNPRRSDYPLSEEVDPIKR
Sbjct: 61  --------DKLSTDWDKAWSKFRKRGKKTIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKR 120

Query: 145 TERSNLMLWTSPRFTLAGAIVIVTLLLVYTILAPINK 182
           TERSNLMLWTSPRFTLAGAIVIVT LLVYTILAPINK
Sbjct: 121 TERSNLMLWTSPRFTLAGAIVIVTFLLVYTILAPINK 145

[Close]

BLAST of Spg033365 vs. NCBI nr
Match: XP_022145494.1 (uncharacterized protein LOC111014931 [Momordica charantia])

HSP 1 Score: 254.2 bits (648), Expect = 8.4e-64
Identity = 136/159 (85.53%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 27  IGTIIAPRSFFSRNKQKS----SSSSSSSSSAFNCSPVIPLCSGRRPKDPRKDDENDDQT 86
           IGTIIAP SFFSRNKQKS    SSSSSSSSS +NCSPV+PLC GRRPKDP KDD+NDDQT
Sbjct: 9   IGTIIAPHSFFSRNKQKSSSSPSSSSSSSSSVYNCSPVVPLCLGRRPKDPPKDDDNDDQT 68

Query: 87  RMASVRSNSSDKPSTDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRSDYPLSEEVDPI 146
           R         DK STDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRS+YPLSEEVDPI
Sbjct: 69  R---------DKFSTDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPI 128

Query: 147 KRTERSNLMLWTSPRFTLAGAIVIVTLLLVYTILAPINK 182
           KRTERSNLMLWTSPRFTLAGAIVIVT LLVYTILAPINK
Sbjct: 129 KRTERSNLMLWTSPRFTLAGAIVIVTFLLVYTILAPINK 158

[Close]

BLAST of Spg033365 vs. NCBI nr
Match: XP_004137799.1 (uncharacterized protein LOC101211971 [Cucumis sativus] >KGN58925.1 hypothetical protein Csa_002393 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-62
Identity = 133/157 (84.71%), Postives = 141/157 (89.81%), Query Frame = 0


Query: 25  MLIGTIIAPRSFFSRNKQKSSSSSSSSSSAFNCSPVIPLCSGRRPKDPRKDDENDDQTRM 84
           ML+GTIIAPRSFFSRNKQKS SS SSSSS+   SPVIPLCSGRRPKDPRKDD+NDDQTR 
Sbjct: 1   MLVGTIIAPRSFFSRNKQKSPSSLSSSSSS---SPVIPLCSGRRPKDPRKDDDNDDQTR- 60

Query: 85  ASVRSNSSDKPSTDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRSDYPLSEEVDPIKR 144
                   DK STDWDKAWSKF+KRGKKT+FSDFSP+KYVSWNPRRS+YPLSEEVDPIKR
Sbjct: 61  --------DKLSTDWDKAWSKFKKRGKKTMFSDFSPNKYVSWNPRRSEYPLSEEVDPIKR 120

Query: 145 TERSNLMLWTSPRFTLAGAIVIVTLLLVYTILAPINK 182
           TERSNLMLWTSPRFTLAGAIVI+T LLVYTILAPINK
Sbjct: 121 TERSNLMLWTSPRFTLAGAIVIITFLLVYTILAPINK 145

[Close]

BLAST of Spg033365 vs. NCBI nr
Match: KAG7017332.1 (hypothetical protein SDJN02_19196 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 249.6 bits (636), Expect = 2.1e-62
Identity = 132/157 (84.08%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 25  MLIGTIIAPRSFFSRNKQKSSSSSSSSSSAFNCSPVIPLCSGRRPKDPRKDDENDDQTRM 84
           MLIGT+IAPR FFSRNKQKSS+SS SSS     SP +PLCSGRRP+DPRKDD+NDDQ R 
Sbjct: 1   MLIGTVIAPRYFFSRNKQKSSASSPSSS-----SPAVPLCSGRRPRDPRKDDDNDDQKR- 60

Query: 85  ASVRSNSSDKPSTDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRSDYPLSEEVDPIKR 144
                   DKPSTDWDKAWSKFRKRGKKTIFSDFSP+KYVSWNPRRSDYPLSEEVDPIKR
Sbjct: 61  --------DKPSTDWDKAWSKFRKRGKKTIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKR 120

Query: 145 TERSNLMLWTSPRFTLAGAIVIVTLLLVYTILAPINK 182
           TERSNLMLWTSPRFTLAGAIVIVT LLVYTILAPINK
Sbjct: 121 TERSNLMLWTSPRFTLAGAIVIVTFLLVYTILAPINK 143

[Close]

BLAST of Spg033365 vs. NCBI nr
Match: XP_008442626.1 (PREDICTED: uncharacterized protein LOC103486442 [Cucumis melo])

HSP 1 Score: 248.8 bits (634), Expect = 3.5e-62
Identity = 133/157 (84.71%), Postives = 140/157 (89.17%), Query Frame = 0


Query: 25  MLIGTIIAPRSFFSRNKQKSSSSSSSSSSAFNCSPVIPLCSGRRPKDPRKDDENDDQTRM 84
           ML+GTIIAPRSFFS NK+KSSSSSSS SS+   SPVIPLCSGRRPKDPRKDD+NDDQTR 
Sbjct: 1   MLVGTIIAPRSFFSGNKRKSSSSSSSLSSS---SPVIPLCSGRRPKDPRKDDDNDDQTR- 60

Query: 85  ASVRSNSSDKPSTDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRSDYPLSEEVDPIKR 144
                   DK STDWDKAWSKF+KRGKKTIFSDFSPDKYVSWNPRRS+YPLSEEVDPIKR
Sbjct: 61  --------DKLSTDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKR 120

Query: 145 TERSNLMLWTSPRFTLAGAIVIVTLLLVYTILAPINK 182
           TERSNLMLWTSPRFTLAGAIVI+  LLVYTILAPINK
Sbjct: 121 TERSNLMLWTSPRFTLAGAIVIIIFLLVYTILAPINK 145

[Close]

BLAST of Spg033365 vs. ExPASy TrEMBL
Match: A0A6J1CVE7 (uncharacterized protein LOC111014931 OS=Momordica charantia OX=3673 GN=LOC111014931 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 4.0e-64
Identity = 136/159 (85.53%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 27  IGTIIAPRSFFSRNKQKS----SSSSSSSSSAFNCSPVIPLCSGRRPKDPRKDDENDDQT 86
           IGTIIAP SFFSRNKQKS    SSSSSSSSS +NCSPV+PLC GRRPKDP KDD+NDDQT
Sbjct: 9   IGTIIAPHSFFSRNKQKSSSSPSSSSSSSSSVYNCSPVVPLCLGRRPKDPPKDDDNDDQT 68

Query: 87  RMASVRSNSSDKPSTDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRSDYPLSEEVDPI 146
           R         DK STDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRS+YPLSEEVDPI
Sbjct: 69  R---------DKFSTDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPI 128

Query: 147 KRTERSNLMLWTSPRFTLAGAIVIVTLLLVYTILAPINK 182
           KRTERSNLMLWTSPRFTLAGAIVIVT LLVYTILAPINK
Sbjct: 129 KRTERSNLMLWTSPRFTLAGAIVIVTFLLVYTILAPINK 158

[Close]

BLAST of Spg033365 vs. ExPASy TrEMBL
Match: A0A0A0LAB4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736730 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 5.8e-63
Identity = 133/157 (84.71%), Postives = 141/157 (89.81%), Query Frame = 0


Query: 25  MLIGTIIAPRSFFSRNKQKSSSSSSSSSSAFNCSPVIPLCSGRRPKDPRKDDENDDQTRM 84
           ML+GTIIAPRSFFSRNKQKS SS SSSSS+   SPVIPLCSGRRPKDPRKDD+NDDQTR 
Sbjct: 1   MLVGTIIAPRSFFSRNKQKSPSSLSSSSSS---SPVIPLCSGRRPKDPRKDDDNDDQTR- 60

Query: 85  ASVRSNSSDKPSTDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRSDYPLSEEVDPIKR 144
                   DK STDWDKAWSKF+KRGKKT+FSDFSP+KYVSWNPRRS+YPLSEEVDPIKR
Sbjct: 61  --------DKLSTDWDKAWSKFKKRGKKTMFSDFSPNKYVSWNPRRSEYPLSEEVDPIKR 120

Query: 145 TERSNLMLWTSPRFTLAGAIVIVTLLLVYTILAPINK 182
           TERSNLMLWTSPRFTLAGAIVI+T LLVYTILAPINK
Sbjct: 121 TERSNLMLWTSPRFTLAGAIVIITFLLVYTILAPINK 145

[Close]

BLAST of Spg033365 vs. ExPASy TrEMBL
Match: A0A6J1J3V4 (uncharacterized protein LOC111482428 OS=Cucurbita maxima OX=3661 GN=LOC111482428 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.7e-62
Identity = 130/157 (82.80%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 25  MLIGTIIAPRSFFSRNKQKSSSSSSSSSSAFNCSPVIPLCSGRRPKDPRKDDENDDQTRM 84
           MLIGT+IAPR FFSRNKQK     SS+SS F+ SPV+PLCSGRRP+DPRKDD+NDDQ R 
Sbjct: 1   MLIGTVIAPRYFFSRNKQK-----SSASSPFSSSPVVPLCSGRRPRDPRKDDDNDDQKR- 60

Query: 85  ASVRSNSSDKPSTDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRSDYPLSEEVDPIKR 144
                   DKPSTDWDKAWSKFRKRGKKTIFSDFSP+KYVSWNPRRS+YPLSEEVDPIKR
Sbjct: 61  --------DKPSTDWDKAWSKFRKRGKKTIFSDFSPNKYVSWNPRRSEYPLSEEVDPIKR 120

Query: 145 TERSNLMLWTSPRFTLAGAIVIVTLLLVYTILAPINK 182
           TERSNLMLWTSPRFTLAGAIVIVT LLVYTILAPINK
Sbjct: 121 TERSNLMLWTSPRFTLAGAIVIVTFLLVYTILAPINK 143

[Close]

BLAST of Spg033365 vs. ExPASy TrEMBL
Match: A0A1S3B6W3 (uncharacterized protein LOC103486442 OS=Cucumis melo OX=3656 GN=LOC103486442 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.7e-62
Identity = 133/157 (84.71%), Postives = 140/157 (89.17%), Query Frame = 0


Query: 25  MLIGTIIAPRSFFSRNKQKSSSSSSSSSSAFNCSPVIPLCSGRRPKDPRKDDENDDQTRM 84
           ML+GTIIAPRSFFS NK+KSSSSSSS SS+   SPVIPLCSGRRPKDPRKDD+NDDQTR 
Sbjct: 1   MLVGTIIAPRSFFSGNKRKSSSSSSSLSSS---SPVIPLCSGRRPKDPRKDDDNDDQTR- 60

Query: 85  ASVRSNSSDKPSTDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRSDYPLSEEVDPIKR 144
                   DK STDWDKAWSKF+KRGKKTIFSDFSPDKYVSWNPRRS+YPLSEEVDPIKR
Sbjct: 61  --------DKLSTDWDKAWSKFKKRGKKTIFSDFSPDKYVSWNPRRSEYPLSEEVDPIKR 120

Query: 145 TERSNLMLWTSPRFTLAGAIVIVTLLLVYTILAPINK 182
           TERSNLMLWTSPRFTLAGAIVI+  LLVYTILAPINK
Sbjct: 121 TERSNLMLWTSPRFTLAGAIVIIIFLLVYTILAPINK 145

[Close]

BLAST of Spg033365 vs. ExPASy TrEMBL
Match: A0A6J1F162 (uncharacterized protein LOC111441439 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441439 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 6.5e-62
Identity = 131/157 (83.44%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 25  MLIGTIIAPRSFFSRNKQKSSSSSSSSSSAFNCSPVIPLCSGRRPKDPRKDDENDDQTRM 84
           MLIGT+IAPR FFSRNK KSS+SS SSS     SP +PLCSGRRP+DPRKDD+NDDQ R 
Sbjct: 1   MLIGTVIAPRYFFSRNKLKSSASSPSSS-----SPAVPLCSGRRPRDPRKDDDNDDQKR- 60

Query: 85  ASVRSNSSDKPSTDWDKAWSKFRKRGKKTIFSDFSPDKYVSWNPRRSDYPLSEEVDPIKR 144
                   DKPSTDWDKAWSKFRKRGKKTIFSDFSP+KYVSWNPRRSDYPLSEEVDPIKR
Sbjct: 61  --------DKPSTDWDKAWSKFRKRGKKTIFSDFSPNKYVSWNPRRSDYPLSEEVDPIKR 120

Query: 145 TERSNLMLWTSPRFTLAGAIVIVTLLLVYTILAPINK 182
           TERSNLMLWTSPRFTLAGAIVIVT LLVYTILAPINK
Sbjct: 121 TERSNLMLWTSPRFTLAGAIVIVTFLLVYTILAPINK 143

[Close]

BLAST of Spg033365 vs. TAIR 10
Match: AT3G53470.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 141.0 bits (354), Expect = 9.6e-34
Identity = 78/130 (60.00%), Postives = 92/130 (70.77%), Query Frame = 0


Query: 50  SSSSAFNCSPVIPLCSGRRPKDPRKDDENDDQTRMASVRSNSSDKPSTDWDKAWSKFRKR 109
           SSSS F CS   P         PRK +E++             DK STDWDKAW  F+K+
Sbjct: 23  SSSSRFRCSNNEP---------PRKGNESN---------GGGGDKASTDWDKAWKNFKKQ 82

Query: 110 GKKTIFSDFSPDKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSPRFTLAGAIVIVTL 169
            KK++FS F+ DKYV+WNP RS++ LSEEVDPIKRTERSNLMLWTSPRFTL GAIVIV+ 
Sbjct: 83  SKKSLFSQFNVDKYVTWNPPRSEFDLSEEVDPIKRTERSNLMLWTSPRFTLVGAIVIVSF 134

Query: 170 LLVYTILAPI 180
           LL+YTILAP+
Sbjct: 143 LLLYTILAPV 134

[Close]

BLAST of Spg033365 vs. TAIR 10
Match: AT3G53470.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-33
Identity = 78/130 (60.00%), Postives = 92/130 (70.77%), Query Frame = 0


Query: 50  SSSSAFNCSPVIPLCSGRRPKDPRKDDENDDQTRMASVRSNSSDKPSTDWDKAWSKFRKR 109
           SSSS F CS   P         PRK +E++             DK STDWDKAW  F+K+
Sbjct: 23  SSSSRFRCSNNEP---------PRKGNESN--------AGGGGDKASTDWDKAWKNFKKQ 82

Query: 110 GKKTIFSDFSPDKYVSWNPRRSDYPLSEEVDPIKRTERSNLMLWTSPRFTLAGAIVIVTL 169
            KK++FS F+ DKYV+WNP RS++ LSEEVDPIKRTERSNLMLWTSPRFTL GAIVIV+ 
Sbjct: 83  SKKSLFSQFNVDKYVTWNPPRSEFDLSEEVDPIKRTERSNLMLWTSPRFTLVGAIVIVSF 135

Query: 170 LLVYTILAPI 180
           LL+YTILAP+
Sbjct: 143 LLLYTILAPV 135

The following BLAST results are available for this feature:

BLAST of Spg033365 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906326.1	2.6e-65	89.17	uncharacterized protein LOC120092168 [Benincasa hispida]	[more]
XP_022145494.1	8.4e-64	85.53	uncharacterized protein LOC111014931 [Momordica charantia]	[more]
XP_004137799.1	1.2e-62	84.71	uncharacterized protein LOC101211971 [Cucumis sativus] >KGN58925.1 hypothetical ...	[more]
KAG7017332.1	2.1e-62	84.08	hypothetical protein SDJN02_19196 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_008442626.1	3.5e-62	84.71	PREDICTED: uncharacterized protein LOC103486442 [Cucumis melo]	[more]

BLAST of Spg033365 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg033365 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVE7	4.0e-64	85.53	uncharacterized protein LOC111014931 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A0A0LAB4	5.8e-63	84.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736730 PE=4 SV=1	[more]
A0A6J1J3V4	1.7e-62	82.80	uncharacterized protein LOC111482428 OS=Cucurbita maxima OX=3661 GN=LOC111482428...	[more]
A0A1S3B6W3	1.7e-62	84.71	uncharacterized protein LOC103486442 OS=Cucumis melo OX=3656 GN=LOC103486442 PE=...	[more]
A0A6J1F162	6.5e-62	83.44	uncharacterized protein LOC111441439 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Spg033365 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53470.1	9.6e-34	60.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G53470.2	1.3e-33	60.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..100
None	No IPR available	PANTHER	PTHR36043	2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE	coord: 38..179
None	No IPR available	PANTHER	PTHR36043:SF1	2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE	coord: 38..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg033365.1	Spg033365.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane