Spg033040 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg033040
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA polymerase delta small subunit
Location	scaffold5: 6889769 .. 6901249 (-)
RNA-Seq Expression	Spg033040
Synteny	Spg033040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAAACAAGTTTTGGCCTTTTGAGGATTTTTTTTTTATACATATAAAAAGGAAAGTCTGAAAATTGCGCCAATTTTTAAGCAGTGGAACAAGAACTTCTAATTTCTACCCTACCAATTGAGGTTCGGAAGAGTAAATTTTTTCTGCTACAATTTCTCCGTTCACTTTCTTCCTCGCCATGGAAATCGACTCACAAAAGAATCTCCAGCGCAAGCAGTGTACCTATCAAATATCGGTAGCTCTCTGCCTCTTCTATTTCTTAGTTTGCTGTTCATTTCCTCAAAAGTTTTACCTTTCCCGCCTTTTTTCGCCTAACTATGCTACTTTGGAAATGGAAGGAATTTGACTTCGATATTTGTTCATTTTCAATTGCTTAACTTTCTTAGTAAACGAAGGTCGGAGAAGGCCGGAAAATGGGCGGGAATTGGGAGCAATCTTGCCGATTGTGTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTAAATGGTATTGTTTGATGTAGGATGAGCAGTACAAGGTTCAGAAGGAGACGTACAGGGGCCAGCAATACAGTCACATTTACTTCGCTCGACTCCACTTGATGAGAACGATACTCCATTCACTTGTCTCTAAGTGGAAACCTCATTTACCTGGTATTTGTTTTCCCCGTTCACTTTATTTAGCTGTTTAATGCCTGAGAAGTTCGGATGGAAGTGGATTTTGTTATTCTATTCATGGGTACATCATAATTCTTGGCTTTATGGTCCTTTAATCTGTTGATTTTTTTCCCTTTTGGTGAGTTTTGGTATCTTAACACATTCAAAAGTTTAGTGTTTTTATTTTTGTCGTTGAACTCAATTTAGGGTGGATTTGGACCAAGCTTGACTTTGAATTGCTTTTTAGTTATTCGTCTTGCATGTAAGTTGTAACTGTTTAAGCATTGTGCTTTTAATCATAATTCAAGGTAGAGCTTAGAAACAATTTCATGAGGAATGGGTTTTATGGATTAGTTGAAAAATTTTCTTGAAAACAATGTCTTGCAGTTTGTACTGTATTGGGATTGGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCCTCTACAAGCACATGAAACTTAAACCTACCATTCTGGATGAGTATTCAAAGGAGGTAATATATTCAAACAAATATGTCAAATACCATTTATATGACTTTCTAATTTTGGTGTTATGAGATTGGATTGAGACATTTAAATGGAATGTACAGAGATCTGCCACCCCACTCGTTCAGCCACATAACTTTATGCACCCAGATGATCACCTAGTTTTGGAAGATGAAAGTGGGAGAGTCAAGCTTTCCGGGGCTGTGCTTATACCTTCTGTGTATGTTACAGGTCCGTATCACAGAATGAAATTGAATGAAACATGCTGCCCTTTTCTCAGCTATTGAAGCCTCGAGGAGTTGCATAAAATTGTGATCAATTTTTTGAGCATGTTGATACATGTTGCACCTGTTCATCCTTTAACTTCTATTCTAATTTTGTATGAGTCGATCCATGTTGCATTTGTTGTTGCAGCCAATGTATTGCTCATCTTCCCATATTGTACATGCAAATTATAACTGGAGCAGCTTTGATTATTTGTTTAAAAGCATATTCTGCTGTATGAAATATTAAATCTCTCTCTCTCTCTCTCTCTTTGAAGCATTGCATAAAGTTATTAAATTTTTTAGCACGTTGAAGCAGGATGCACGAATTTATCCTTGAACCTGGATTTCTTTTAGTTCTTTATGATTTGTTCCAAGTTGCATTAATCGTTGTGGGCAATTTACCATCTGTTTCCCTATGTTGTGCATGCAGATTATAACTTTGACCTGAAATAGTTGTTTGTTTAAAGGCATTCACTGCTGTATAAAAAAATGTTTTTTTTCGGGAGCACTTTAATGTATTATCTAATACGTGTGCCAGGGATTGTTGTTGCATTGCATGGAAAGGAAACTTGCGTTGGTGACTTTTTGGTTTTGGACATCCTAGAAGCTGGATTGCCACCCCAGATAGAGCGGCCACTCATATCAAGTAGGATGTGATAACTTCCCTCTTTTTTTTTCTTATTTACTGTCTCCATTTTTTTAAATTCGTCCAGGAGTGAAATGTATTTCATTATAGTGTAGTCAGTAGTGAGAGGGTTAATCACGTATTTTGTTATACTTTATGTTATCAGTTGCTGCCATATTAGTTTATTGTTTCTTAAACAGTTCAGGGTTCATTATTTTGTTATTTATTAGTTTATGGGTAGTGTTTTTCGAGAATGTCAGCATTTTGAAGCCTCGAGGGTGTATTTTCGTTAATGAAGTGTCTGTCAATTGCAATACAGTTTGGGCGGCTGTGGTGACTGGAGAAACAACCAGGGGCCATAGCTGTGAACTCACTTTTGAATTGCTCCTTAAGACCACCGACTGTTTCTCTGATTTCAATTGCTCCTTGAGATAATTGGTTATTTCTTACTATGAAGATTAGGATGGCTATTTCTTGGGTTTCCCTCCATGGTAACTTGATGGTTATTTCTAGCATAAATGGTATAATTATCTGTTGTTGAAAGAAGGGTAGGCTTATTATCGCTAGGCAGCTCTTTCCAACCTCCCTAATTATTTCATGGTATTGTTCAAGATTCAATTCCTGTCAAGGTTACAACTTACAACCGTCAAGAACATTTTAGAGATTTTCTTTAGGAAGGGCCTAAGATGGATGATGGTTACAACTCGATTAATCTATATCTATACTATATATAAATGGGGCTAAGAGGGGAGAATCTTTGCCTTCCCATTTTGCCCTTAACATTTTAATAAATTCCTCTTTTGTCCCTCCCTTCGAATAGTTGCAACTGTTAGAAGTGTCCCGTTGAGAGAATTTAATCCATGGGGAGTGGTTACATAGTGAAACAAAGCATTCTTTCACATATGGGTGTGACTATTCCATTGCTTCGAATAGTTGCAACTGTTAGAAGTGTTTGTTGAGAGAATTTAATCCATGGGGAGTGGTTACGTAGTGAAACAAAGCATTCTTTCACATATGAGTGTGACTTCCACTGTGTATGGGTGTTATCTAGATCGTAAATTTGAAACATCATGATTTAATAGTGGAGACGTGTCGTTTATAGGTTCTATAGAAAACAACCTCTTTATTCCTATTTTTGGGTTATACAATAGTGTCCCAAATGATTGAGTGTTTGAAAATGTTTAGTTCACGTTTATTGTTATAAACAATTATTTTGACATCTAATCCTAAAGTTACATGATACTTCATTAGGAGAAACTTCCTCTTTCTATTTTTCCCTTCTCATTTTTTATTCACTTTTTAATAATATTTTCCTTAAACATTATATGCATATTTTAGTTTTTTTGACATTTAGTACTCGTGTTCTTTCAATTATATAAATATCAATATTTTATAGACAAAATGTTCAAAATATTTCATAGAGATGCAAATATCTCATAATATACTTTTTTTTCACTTAAATAAATGTGTATTTTTAGAATAATTTTCTTAATTTAATTATTAATAATTAATTTAAAACAATAATATAATTTATTTATTTATTTCTTATATGTATAAGACACAACTATGTAAACAATTCTAAATTATATTTTTTTCTTTAGAATTTTCACGAAAAGGATAAAAATATAAAAACATTAAAATGAAATTTTTTTGATGTATGTGTTTCACTATATCAAAATATTAACATATTTGTTTAACAAATTAATTATTTGTACAAAATTTCGTTTGTAATATATACATAGAAATTTTCATGAAAAAACAATAATATGAAAACATTGAAAAAAAAAGTTTGCTTTGTCTACCTTTTAAAATTTTATTAAAATAAAATTATATAATATTTATTTATTGCATGTTAGAAAACTATTATTTTCTCATATTTTAATTTAAAACTATAATATTTCATGTGCAATGCACGTGTTACTCAACTAGTTGGACTAAGGTCTCTCTCACAGTGGAAGGTGGTTCGAATATTGTAATCTTCCTAAGAAAAATGTGACACTCCTTCCTAAATGCTTATGGTGGTTCATGAGGGACAAAGGTGCTCTGTAGCAATCTTTCTTATATTAAAAATGGAATTTCAAATGCATGCAGGTGAAGATAAGTACGTGGTTTTTGTGTCGGGCTTAAGTATTGGGAGCAGCATCTCTAATCCTCTACAGTTTCAGCTCCTTATTGATCATATAACAGGACATTTAGGGGATGAGAAGGTTAATTTCATCTTTATATTTTCCATCTCTAAATGTTTATCAGTTGCTAAAATTTTTAGAACCATTAATTGAACAGGAACAAGGGATTGCAGCTCAAATAGTTCATGTTGTCATTTGTGGGAATTCGGTTGAAATTCCCCGTGCACTTTTAAATGGGCAGGTAGAGGTCTCACAAACTATCCATCTTTTTTTTAGGAAAAAAAAACTATGTATACTGTTTCAATATGTTTAAGTATTTTTCCAAGATCAGTTTAATTTATTTATCGAATGCAGTATCTTTTTTGTTATTACTTGTGAGTGAAAGAATTGAAAGGCTGGTCTTCTTGAACTCACAAGAGGCCTTGAAAGGAACTACACCTTTTATGGTTTATGTAGAAAATCAAGCTGTAAATTAGGGCTTTATTTTGTGAGATTGTTTCCTTAGGTGTGTCGATTGATATTTCCTTGTATATATTTATAGCTGTATTTTTCTTTTCCATATAGGTTTAGATTGTCAGCAGATTTTTTGCTTATTTGATTGAGAGTCTCTTTGTATAAAGCTCTTCTTCCTCACTCAATGAACAATAAGAAGAAATATTATATTTTATACATAGCTTCATGGTATCAGAGCTTTGAAGCTATTCAAACCCTAGCTGTCATTTGTTGGAACCCTAGCCGCCGTCACTGTCGGAACCCTAATCATTCGTCGGAACCCTAATCGTTCGCCGTCGTTGCCCTAGTACTCAGACGCCGCCGCCGTTGCTCTAGCATTCAGACGACGCCTACGCCGCCGTTCTAGCACTCAGACGCCGCCGCCGCCACTGCCCTAGCACTCAGACGCCGTCGCCGTCGCTTCCCTGGCACTCAAACGCCGCCGCCGCCGCTACCCTAGCACTCAACGACGCCGCCGCCGCTGCCCTAGCGTCCAGACGATCTTTCCTCGCACACAGACAGTGCCGCGCTCGCATCCTGGCGCCGCCACCTTCGCACGTCGCCGCCGTCAGCTTCGCTCGTTGCCACCATCACCTCCGCCGCTGTCTTCTTTCCCAAACGCAGGATCTTCTCCATTTGATTTCCATCTGTATAACCTCTGTTTTTTTTATTATTTTTTTTTCTCCCCTCAAAATGTCAGGATCAGATCTTCAAATGGCCATTCCTTCCTCCCATGAGAGCAACATCACTCAAATCACATGTCACAAACTCAAAGGCCACAATTATCTTCAGTGGTCTCAATCTGTGATGATGTTCATGTATGGTCGTGGACGGGAAGACTATATCACTGGAAAAGCCACTGCACCCAAACTTGAGGATCCAAAATTTCGAATATGGAGAGCTGAAAATAATCAAGTCATGAGTTGGTTGATCAATTCCATGACTACTGAAATTGGAGAGAATTTTCTCCTATATTCAACCGCCAAGGAAATTTGGGAGGCCGCTCGTGATACATTCTCCAATCAAGAAAATACGGCTGAACTCTTCCAAATAGAGACTACTCTCCAAGATCTGAAACAAGGTGAATTAACTGTTACCACTTATTTCACCACTTTATCACGCTATTGGCAACAATTGGACTTGTTTGAAACACATGACTGGAAATGTTCTGAGGATGGTTCTCTGTTCCGCAAATTTGTGGAGACAGAGAATTTTCAAATTTCTTATGGGTCTCAATAAATCTCTTGATGAAGTTCGTGGTCGAATCCTTGGTACTAAACCATTACCTAGTCTTCGTGAAGTTTTTTCTAAGGTTCGCAGGGAAGAAAGTCGAAAACAAGTAATGTTGGGACCAATTGAACAAAATGGACCTGCTGCATTCATTGCCCACCAAGATCATCCTAGTGATTCACTAGCTCTTGCAGCTCGTGGAAGTTCTCATGGAGATGGTAGATCACGCAAAGGAAGACCATGGTGCGATCATTGCCACAAACTTGGACATGTAAAAGAAACTTGTTGGAAAATCCATGGAAAGCCAGCAAATTGGAAGCCAAATAATGCCAAATCTGATCGAGAAACTAGGGGAAATGTTGCCGTCTCTGAAACCTCTAATTCGCCGGTCACCAAAGATATTTTGGATATGCTACAACAATTGTTGAACAAATCAAATCCAACACCTGTAAGTGGTTCTGGGAGTTTGCAACAAGGTAACCAAAATCCCCTTGTTCTTCATACTCAAACTGTTCCATCTGAATGGATAGTGGACTCTGGAGTGTCCGATCATATGACAGGTGATAAATCCTTATTCTCGTCAATTTTTCCTTATACGGGTAATCTTTCTGTTCGAATTGCTGACGGCACACCTACTAAAGTAATTGGAATTGGTAGTATTCAGATATCAAGTTCCTTGACTCTTGAGTCTGTATTGTTTGTACCAAAGCTAGAATATAATCTACTATCCGTGAGTAAGTTGAATAAGGATATGAATTGTGAAACTAAGTTTCTTGCAAACTCTTGTATTTTTCAGGACTTGGGATCGGGAAAGACGATTGGCAATGTTGAGTTATGTGCAGGGTTGTATCTTCTCAAAGTTGAGAATCCTCCAACAACAAAGGGATGCAATAAACTTGTAGTTCAGTCTGGTTGTGAGTCAGCTTATGTTTCAAAGTCTTTAGATCATTCCGATAAAGATAACCTAGTCATGATGTGGCATTATCGTCTTGGTCATCCAAATTTTGCCTATCTTGAGCGTTTGCTCCCTTCTCTATTTATCAATAAAAAGAGTAAATTCTTCCAATGTGAGATTTGTCAACTTTCCAAACACACTCGTGCACAGTTTTCACCTCATTCTTATATTCCATCTCAACCGTTCTCTCTTATCCATGGGGACATTTGGGGTCCTTCAAGAATAAAAAATGTGAATGGGGCACGTTGGTTTCTTCTATTAGTTGATGATCACACCCGTTTGAGTTGGACATTTCTTATGAAAGATAAGTCTGAAACTAGCCAACTATTCACAATCTTTCATAAAATGATCCAAAATCAATTTCAAGCCAATATCAAAGTTCTTAAAACTGATAATGCTCGTGATTTCTTCAACTCTACCCTTGGATCCTATCTTCAATCTCATGGCATTGTTCACCAAAGTTCTTGTGTGGATACACCCCAACAAAATGGGGTAGTTGAACGCAAAAATCGTCATCTCCTTGATGTAGCCCGATCCCTCATGCTCACTTCAAATGTTCCAAAAACTTTTTGGGGTGAAGCAGTTTTAGCTGCTACATATCTTATAAACCGCATGCCATCTCGTATCCTCAAATTCAAAACACCTTTACAAAGTATGCTTACTCTACATCCCACATCCCATCTCGTGTCTCAACTACCACTAAAATTATTTGGGTGTACTGCATTTGTCCATATATACCCTCAACACCGTAGTAAGCTTGATGCCAGATCCATGAAATGTATCTTTCTAGGATACTCGCCAAATAAGAAAGGATATAAATGCTTTTATCCTCTAACTCATCAATTCTTTCATACCATGGATGTAACCTTCTTTGAAAATCAGCCATATTTTCCCAATTCTGCACTTCAAGGGGAGCATTATGACCTTGAATCACAAAATTGGGATTGTGTACCAAATTTTCCTCCTAAACCATTTGAGAGTCCGTCTGAACCCTCCTCTGAGCCAATGCCCAAATCTATCCCTGGGGCTGAATTGCAAGTTTATTCACGAAGAACAAAGCAACTTAATGAAGTGCAACCCTCGCATGTTCAGCAAAGCCAAGATCTAACCCAAAATCCTAATGTCCCTGAAATAGTACACGAGTCGACAGAAGAGGATATGGATAGACCCATTGCAGTAAGAAAAGGTGTTCGCTCATGTACTCAACACCCTATACGGTATCACTTATCTTACACTAATTTGTCGCCATTATTTAGAGCATTTGTAACTTCACTTGATCAGATACAAACGCCGAATACAGTACAGGAAGCCTTACAAAGATCTGAATGGAAAGCAGCCACTCTAGAAGAATTGCGAGCACTTGAAAAAAATGGGACATGGATTCTTACAGATTTGCCTCCAGGCAAACGCACAGTTGGATGTAGATGGATTTTTTCTACCAAACATAAACCAGATGGAAGTATAGAACGATTCAAAGCTCGTCTTGTGGCTAAAGGATTCACCCAAGCTTATGGGATTGACTATCAGGAAACGTTTGCTTCAGTCGCCAAGTTGAATACCATTCGAGTACTCCTCTCTATTGCAACTAATCTAGATTGGCCGTTGTTCCAACTCGATGTAAAAAACGCTTTTCTGAATGGTGACCTAGCAGAGGAAGTATACATGGACATACCTCCTGGATTTGAAGATCGATATACTAGAGGAAAGGTATGTAAACTCAAGAAATCTCTTTATGGGCTGAAACAGTCACCCCGAGCTTGGTTTGAAAAGTTTACAAATGTGTTAAAGCAAGATGGCTATACTCAGTGTCAATCTGATCACACCTTATTCATCAAACATTTCTCACCAAGTAATATTACTGTGTTAATAGTTTATGTCGATGATATTATTCTCACAGGAAATGTTTCGGAAGAAATGGTTCGACTCAAGCAACTTCTCTCAAGGAAATTTGAAATAAAAGACTTGGGGCATTTAAGATATTTCCTAGGAATGGAAGTTGCAAGATCCAGCACAGGGATTTCTGTAACTCAACGAAAATACACTTTAGATCTCTTAAAAGAGACTGGGATGAGTGGTTGTAAACCTGTTGATACACCTATGGATGCAAATACAAAACTTGGGGTTAACCTTGAAGATGAAGTAGTCGATCGAGGTAGGTATCAGCGACTAGTTGGAAAGCTAATATACTTAACTCATACTCGACCAGACATTAGCTTTGCTGTTAGTGTGGTAAGTCAATTCCTGAACAAACCTTCTAAAGAACATATGGAAGCTGTGTATAGAATATTGAGATATCTCAAACATGATCCTAGTAAGGGCCTTATGTTTAGGAAGACCACAAATCGATCTTTAGAAGTTTACACTGATGCAGATTGGGCTGAATCTCCTATTGACCGTAAGTCAACATCAGGATATTGTTCTTATGTATGGGGAAACTTAGTTACCTGGCGCAGCAAGAAACAACAGGTTGTAGCTCGAAGCAGTGCTGAAGCTGAGTTTCGATCACTAGCACATGGGATTTGCGAAGGAATTTGGTTAAAACGTCTTCTCACTGAACTCAAGGTCAAGACAGAAGGTACCATAGAAGTACTGTGTGATAATCAATCTGCCATAGCTATTGCAAAGAATCCAATACATCATGACCGAATGAAGCATGTCGAGATAGATCGTCACTTCATCAGTGAGAAAATTGAGACAAACACTATTAACTTGAGATATGTGCCTTCCCAACAACAAGTTGCAGATATACTAACTAAGGCTTTACATCGAACCAGTCTCGGTGGTTTAATTTCCAAGCTTGGCATGGCAAGTATATACCATCCAGCTTGAGGGGGAGTGTAGAAAATCAAGCTGTAAATTAGGGCTTTATTTTGTGAGATTGTTTCCTTAGGTGTGTTGATTGATATTTCCTTGTATATATTTATAGCTGTATTTTTCTTTTCCATATAGGTTTAGATTGTCAGCAGATTTTCTGCTCATTTGATTGAGAGTCTCTTTGTATAAAGCTCTTCTTCCTCACTCAATGAACAATAAGAAGAAATATTATATTTTATACATAGCTTCAGTTTATCCTGATTAATTTACTATGGTTCTTATCTAACAGGACTAGTTAATTATTTATGTGGGAGAAATTGGCTACAAGATGCTGTTAAATGAGTTTTGGAATGACTAATCAAATGCAAATGCCAACATGACCCTGAAACATATGTGTGTATCTGATGTTTTCTTAGGGGTATTGTGTAGGGCAGTCTTCGGTAAAACTAAATCACATGAATCATGCAATTTTCTACTTTCGAGAAGAAAATCACAAAAATTTATGTGAAGTTTGATAGATAAGGATCTGGAGAAATTTAGAACTTTCGCAGTGTTCAATTATTTTCTCTGCATACTCTAGTAGTGTCAGTGATGTTAATTGTTAGGCTTTTTGTTGATGCATGATGTATTTCTATTTTCTGCAGCATTTGTCTGCAAAGGACCAAACGAAGCTGACAGAACCGCTTAAAGAGCTAGATATCCTATTGAATCAGGTTCTTATCTAGTTGGTTCTCAGTTCAACTTTTTATCAAATCTATTTCCCTTTTCCTTCGATCCTACTACCTGATTGTAAATCCATTTTCCTTTTCATCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCAGGTTCCAGTGACCCAGCCAATTTTTCCTTACCTCAGCAGGTATTTTTTTTACAGCAGTGATTCCTGCTTTTGACCCCTGGTTTGATTTGTCAATAATGTCACTTTCTTTGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCATCAGCTTATAACACTTTCAGATCTTGCACTAATCCTCATTGTTTTGAGCTTGATAATTTCAGGTTAGTCAATAATGTCAGGCTGATATGGTAATTGACTCGTTTGAACTTGAGTCAGCCTCACTTCAATTGGTGGTCCTTTGGTTTCAGGTTTCTTGGAACATCAGGTCAGAACATAGATGATCTTGAGAAGTATTCAGAGGCTAAAGATAAGCTTGAATTTCTGGAGAGGACATTGAGCTGGAGGCATCTGGCTCCAACTGCTCCAAATACTCTTGGTACAAGTTATTTTTTGGTTGTGTTTTCCATGTTTTGGTTGGTGGATAAGCCATTTGAAACGATTGTTTCTTGATTAGAAGCCCCCATCACTTAACTGAAAGCCCCAAAATGCAGACAAGTTTGTCAAAAGTTTGCAATGATATAAAACTTTCCCAAATTAGTATTTATATAATTTGAGTCTTCCAGGTTGCTATCCTTTCACTGATCGAGATCCTTTCCTGATTGAGAGCTGTCCTCATGTTTATTTTATTGGCAATCAGGACAAGTTCGATACTCGCTTAATAAAGGGTATATTTTCACGTAAACTCTGTTTATTAATTAGCGTGACTGCTGATTTGCTTCTCCTAAAGAATAAATGAATGAGATAATATATTGTCATGTATATTACTTTTTGAAAATGCAGGATCTGAAGGGCAGATGGTTAGACTCATTTCGATTCCAAGATTTTGTGAGAAGGGAGTTGCCGTAATGGTAATATTTTTTTTATTTCAAGTCTTCAATTCACCTTTACCCAATATTTATACCTTTGCATCTCATCTCCCTAGTCATTACTACTGA

mRNA sequence

ATGGAAATCGACTCACAAAAGAATCTCCAGCGCAAGCAGTGTACCTATCAAATATCGGATGAGCAGTACAAGGTTCAGAAGGAGACGTACAGGGGCCAGCAATACAGTCACATTTACTTCGCTCGACTCCACTTGATGAGAACGATACTCCATTCACTTGTCTCTAAGTGGAAACCTCATTTACCTGTTTGTACTGTATTGGGATTGGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCCTCTACAAGCACATGAAACTTAAACCTACCATTCTGGATGAGTATTCAAAGGAGAGATCTGCCACCCCACTCGTTCAGCCACATAACTTTATGCACCCAGATGATCACCTAGTTTTGGAAGATGAAAGTGGGAGAGTCAAGCTTTCCGGGGCTGTGCTTATACCTTCTGTGTATGTTACAGGGATTGTTGTTGCATTGCATGGAAAGGAAACTTGCGTTGGTGACTTTTTGGTTTTGGACATCCTAGAAGCTGGATTGCCACCCCAGATAGAGCGGCCACTCATATCAAGTGAAGATAAGTACGTGGTTTTTGTGTCGGGCTTAAGTATTGGGAGCAGCATCTCTAATCCTCTACAGTTTCAGCTCCTTATTGATCATATAACAGGACATTTAGGGGATGAGAAGGAACAAGGGATTGCAGCTCAAATAGTTCATGTTGTCATTTGTGGGAATTCGGTTGAAATTCCCCGTGCACTTTTAAATGGGCAGCATTTGTCTGCAAAGGACCAAACGAAGCTGACAGAACCGCTTAAAGAGCTAGATATCCTATTGAATCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCAGGTTCCAGTGACCCAGCCAATTTTTCCTTACCTCAGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCATCAGCTTATAACACTTTCAGATCTTGCACTAATCCTCATTGTTTTGAGCTTGATAATTTCAGGTTTCTTGGAACATCAGGTCAGAACATAGATGATCTTGAGAAGTATTCAGAGGCTAAAGATAAGCTTGAATTTCTGGAGAGGACATTGAGCTGGAGGCATCTGGCTCCAACTGCTCCAAATACTCTTGGTTGCTATCCTTTCACTGATCGAGATCCTTTCCTGATTGAGAGCTGTCCTCATGTTTATTTTATTGGCAATCAGGACAAGTTCGATACTCGCTTAATAAAGGGATCTGAAGGGCAGATGGTTAGACTCATTTCGATTCCAAGATTTTGTGAGAAGGGAGTTGCCGTAATGGTAATATTTTTTTTATTTCAAGTCTTCAATTCACCTTTACCCAATATTTATACCTTTGCATCTCATCTCCCTAGTCATTACTACTGA

Coding sequence (CDS)

ATGGAAATCGACTCACAAAAGAATCTCCAGCGCAAGCAGTGTACCTATCAAATATCGGATGAGCAGTACAAGGTTCAGAAGGAGACGTACAGGGGCCAGCAATACAGTCACATTTACTTCGCTCGACTCCACTTGATGAGAACGATACTCCATTCACTTGTCTCTAAGTGGAAACCTCATTTACCTGTTTGTACTGTATTGGGATTGGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCCTCTACAAGCACATGAAACTTAAACCTACCATTCTGGATGAGTATTCAAAGGAGAGATCTGCCACCCCACTCGTTCAGCCACATAACTTTATGCACCCAGATGATCACCTAGTTTTGGAAGATGAAAGTGGGAGAGTCAAGCTTTCCGGGGCTGTGCTTATACCTTCTGTGTATGTTACAGGGATTGTTGTTGCATTGCATGGAAAGGAAACTTGCGTTGGTGACTTTTTGGTTTTGGACATCCTAGAAGCTGGATTGCCACCCCAGATAGAGCGGCCACTCATATCAAGTGAAGATAAGTACGTGGTTTTTGTGTCGGGCTTAAGTATTGGGAGCAGCATCTCTAATCCTCTACAGTTTCAGCTCCTTATTGATCATATAACAGGACATTTAGGGGATGAGAAGGAACAAGGGATTGCAGCTCAAATAGTTCATGTTGTCATTTGTGGGAATTCGGTTGAAATTCCCCGTGCACTTTTAAATGGGCAGCATTTGTCTGCAAAGGACCAAACGAAGCTGACAGAACCGCTTAAAGAGCTAGATATCCTATTGAATCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCAGGTTCCAGTGACCCAGCCAATTTTTCCTTACCTCAGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCATCAGCTTATAACACTTTCAGATCTTGCACTAATCCTCATTGTTTTGAGCTTGATAATTTCAGGTTTCTTGGAACATCAGGTCAGAACATAGATGATCTTGAGAAGTATTCAGAGGCTAAAGATAAGCTTGAATTTCTGGAGAGGACATTGAGCTGGAGGCATCTGGCTCCAACTGCTCCAAATACTCTTGGTTGCTATCCTTTCACTGATCGAGATCCTTTCCTGATTGAGAGCTGTCCTCATGTTTATTTTATTGGCAATCAGGACAAGTTCGATACTCGCTTAATAAAGGGATCTGAAGGGCAGATGGTTAGACTCATTTCGATTCCAAGATTTTGTGAGAAGGGAGTTGCCGTAATGGTAATATTTTTTTTATTTCAAGTCTTCAATTCACCTTTACCCAATATTTATACCTTTGCATCTCATCTCCCTAGTCATTACTACTGA

Protein sequence

MEIDSQKNLQRKQCTYQISDEQYKVQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPHLPVCTVLGLEEGKECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLEDESGRVKLSGAVLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDKYVVFVSGLSIGSSISNPLQFQLLIDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRALLNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVMVIFFLFQVFNSPLPNIYTFASHLPSHYY

Homology

[Close]

BLAST of Spg033040 vs. NCBI nr
Match: XP_038906226.1 (DNA polymerase delta small subunit isoform X3 [Benincasa hispida])

HSP 1 Score: 826.2 bits (2133), Expect = 1.3e-235
Identity = 396/421 (94.06%), Postives = 412/421 (97.86%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYQISDEQYKVQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 60
           MEIDS KNLQRKQCTY+I DEQYK+QKETY+GQQYSHIYFARLHLMRTILHSLVSKWKPH
Sbjct: 1   MEIDSLKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSKWKPH 60

Query: 61  LPVCTVLGLEEGKECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLE 120
           LPVCTVLGLEEGKECVIVGT+YKHMKLKPTILDEYSKERSA PLV+PHNFMHPDDHLVLE
Sbjct: 61  LPVCTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSANPLVRPHNFMHPDDHLVLE 120

Query: 121 DESGRVKLSGAVLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 180
           DESGRVKLSGAVL+PSVYVTGIV+AL GKETCVGDFLVLDILEAGLPPQIERPLISSEDK
Sbjct: 121 DESGRVKLSGAVLLPSVYVTGIVLALRGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 180

Query: 181 YVVFVSGLSIGSSISNPLQFQLLIDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRALL 240
           YV+FVSG+SIGSSISNPLQFQLL+DHITGHLGDEKEQGIAAQIVHVVICGNSVEIPR +L
Sbjct: 181 YVIFVSGISIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDILLNQ+A GLPVDIMPGSSDPANFSLPQQPLHRCL PGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQIAVGLPVDIMPGSSDPANFSLPQQPLHRCLSPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEF+ERTL WRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKG+EGQMVRLI+IPRFCE GVAVM
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCENGVAVM 420

Query: 421 V 422
           +
Sbjct: 421 L 421

[Close]

BLAST of Spg033040 vs. NCBI nr
Match: KAA0043732.1 (DNA polymerase delta small subunit [Cucumis melo var. makuwa])

HSP 1 Score: 818.9 bits (2114), Expect = 2.1e-233
Identity = 397/432 (91.90%), Postives = 413/432 (95.60%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYQISDEQYKVQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 60
           MEIDS KN+ RKQC Y+ISDEQYK+QKETY+GQQYSHIYFARLHLMRTILHSLVS WKPH
Sbjct: 3   MEIDSPKNVHRKQCNYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 62

Query: 61  LPVCTVLGLEEGKECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLE 120
           LPV TVLGLEEGKECVIVGT+YKHMKLKPTILDEYSKERSA PLV+PHNFMHPDDHLVLE
Sbjct: 63  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 122

Query: 121 DESGRVKLSGAVLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 180
           DESGRVKLSG VL+PSVYVTGIV+ALHGKET VGDFLVLDILEA LPPQIERPLISSEDK
Sbjct: 123 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 182

Query: 181 YVVFVSGLSIGSSISNPLQFQLLIDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRALL 240
           YV+FVSGLSIGSSISNPLQFQLL+DHITGHLGDEKEQGIAAQIVHVVICGNSVEIPR +L
Sbjct: 183 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 242

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Sbjct: 243 NGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 302

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDN RFLGTSGQN+DDLEKYSEAKDKLEF+ERTL WRHLAPTAP
Sbjct: 303 SAYNTFRSCTNPHCFELDNLRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 362

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKG+EGQMVRLI+IPRFCE G+AVM
Sbjct: 363 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIAVM 422

Query: 421 VIFFLFQVFNSP 433
           VI F    FNSP
Sbjct: 423 VICF---YFNSP 431

[Close]

BLAST of Spg033040 vs. NCBI nr
Match: XP_004136567.1 (DNA polymerase delta small subunit [Cucumis sativus] >KGN59302.1 hypothetical protein Csa_001594 [Cucumis sativus])

HSP 1 Score: 812.8 bits (2098), Expect = 1.5e-231
Identity = 389/421 (92.40%), Postives = 409/421 (97.15%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYQISDEQYKVQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 60
           MEIDS  N+ RKQCTY++SDEQYK+QKETY+GQQYSHIYFARLHLMRTILHSLVS WKPH
Sbjct: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60

Query: 61  LPVCTVLGLEEGKECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLE 120
           LPV TVLGLEEGKECVIVGT+YKHMKLKPTILDEYSKERSA PLV+PHNFMHPDDHLVLE
Sbjct: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120

Query: 121 DESGRVKLSGAVLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 180
           DESGRVKLSG VL+PSVYVTGIV+ALHGKET VGDFLVLDILEA LPPQIERPLISSEDK
Sbjct: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180

Query: 181 YVVFVSGLSIGSSISNPLQFQLLIDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRALL 240
           YV+FVSGLSIGSSISNPLQFQLL+DHITGHLGDEKEQGIAAQIVHVVICGNSVEIPR +L
Sbjct: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDNFRFLGTSGQN+DDLEKYSEAKDKLEF+ERTL WRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQ+KFDTRL+KG+EGQMVRLI+IPRFCE G+AVM
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420

Query: 421 V 422
           +
Sbjct: 421 L 421

[Close]

BLAST of Spg033040 vs. NCBI nr
Match: XP_038906224.1 (DNA polymerase delta small subunit isoform X1 [Benincasa hispida])

HSP 1 Score: 812.8 bits (2098), Expect = 1.5e-231
Identity = 395/441 (89.57%), Postives = 411/441 (93.20%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYQISDEQYKVQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 60
           MEIDS KNLQRKQCTY+I DEQYK+QKETY+GQQYSHIYFARLHLMRTILHSLVSKWKPH
Sbjct: 1   MEIDSLKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSKWKPH 60

Query: 61  LPVCTVLGLEEGKECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLE 120
           LPVCTVLGLEEGKECVIVGT+YKHMKLKPTILDEYSKERSA PLV+PHNFMHPDDHLVLE
Sbjct: 61  LPVCTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSANPLVRPHNFMHPDDHLVLE 120

Query: 121 DESGRVKLSGAVLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLIS---- 180
           DESGRVKLSGAVL+PSVYVTGIV+AL GKETCVGDFLVLDILEAGLPPQIERPLIS    
Sbjct: 121 DESGRVKLSGAVLLPSVYVTGIVLALRGKETCVGDFLVLDILEAGLPPQIERPLISIHEG 180

Query: 181 ----------------SEDKYVVFVSGLSIGSSISNPLQFQLLIDHITGHLGDEKEQGIA 240
                            EDKYV+FVSG+SIGSSISNPLQFQLL+DHITGHLGDEKEQGIA
Sbjct: 181 QRCSVAKFLIKVQMHAGEDKYVIFVSGISIGSSISNPLQFQLLVDHITGHLGDEKEQGIA 240

Query: 241 AQIVHVVICGNSVEIPRALLNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSS 300
           AQIVHVVICGNSVEIPR +LNGQHLSAKDQTKLTEPLKELDILLNQ+A GLPVDIMPGSS
Sbjct: 241 AQIVHVVICGNSVEIPRGILNGQHLSAKDQTKLTEPLKELDILLNQIAVGLPVDIMPGSS 300

Query: 301 DPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAK 360
           DPANFSLPQQPLHRCL PGSSAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAK
Sbjct: 301 DPANFSLPQQPLHRCLSPGSSAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAK 360

Query: 361 DKLEFLERTLSWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSE 420
           DKLEF+ERTL WRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKG+E
Sbjct: 361 DKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAE 420

Query: 421 GQMVRLISIPRFCEKGVAVMV 422
           GQMVRLI+IPRFCE GVAVM+
Sbjct: 421 GQMVRLIAIPRFCENGVAVML 441

[Close]

BLAST of Spg033040 vs. NCBI nr
Match: XP_008443055.1 (PREDICTED: DNA polymerase delta small subunit [Cucumis melo])

HSP 1 Score: 812.4 bits (2097), Expect = 2.0e-231
Identity = 390/421 (92.64%), Postives = 407/421 (96.67%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYQISDEQYKVQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 60
           MEIDS KN+ RKQC Y+ISDEQYK+QKETY+GQQYSHIYFARLHLMRTILHSLVS WKPH
Sbjct: 3   MEIDSPKNVHRKQCNYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 62

Query: 61  LPVCTVLGLEEGKECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLE 120
           LPV TVLGLEEGKECVIVGT+YKHMKLKPTILDEYSKERSA PLV+PHNFMHPDDHLVLE
Sbjct: 63  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 122

Query: 121 DESGRVKLSGAVLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 180
           DESGRVKLSG VL+PSVYVTGIV+ALHGKET VGDFLVLDILEA LPPQIERPLISSEDK
Sbjct: 123 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 182

Query: 181 YVVFVSGLSIGSSISNPLQFQLLIDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRALL 240
           YV+FVSGLSIGSSISNPLQFQLL+DHITGHLGDEKEQGIAAQIVHVVICGNSVEIPR +L
Sbjct: 183 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 242

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Sbjct: 243 NGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 302

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDN RFLGTSGQN+DDLEKYSEAKDKLEF+ERTL WRHLAPTAP
Sbjct: 303 SAYNTFRSCTNPHCFELDNLRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 362

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKG+EGQMVRLI+IPRFCE G+AVM
Sbjct: 363 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIAVM 422

Query: 421 V 422
           +
Sbjct: 423 L 423

[Close]

BLAST of Spg033040 vs. ExPASy Swiss-Prot
Match: O48520 (DNA polymerase delta small subunit OS=Arabidopsis thaliana OX=3702 GN=POLD2 PE=2 SV=2)

HSP 1 Score: 692.6 bits (1786), Expect = 3.0e-198
Identity = 323/421 (76.72%), Postives = 375/421 (89.07%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYQISDEQYKVQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 60
           MEIDS+K  +RKQ  Y   DE++++QKE YRGQQYS IYFARLHLMRT+L+SL   WK H
Sbjct: 1   MEIDSEKIHERKQSDYNSLDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKSH 60

Query: 61  LPVCTVLGLEEGKECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLE 120
           LPVC VLGLE+GKEC+IVGTL+KHMKLKP +LDEYSKERS TPLV+PHNFMHPDD+L+LE
Sbjct: 61  LPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILE 120

Query: 121 DESGRVKLSGAVLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 180
           DESGRVKL+G+ L P++YVTG+VVALHGKET  G+F V D+LEAGLPPQIERP+   EDK
Sbjct: 121 DESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQEDK 180

Query: 181 YVVFVSGLSIGSSISNPLQFQLLIDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRALL 240
           YVV +SGL IGS  +NPLQFQLL+DHITGHLGDE+EQG+AAQIVHVVI GNS E PR L+
Sbjct: 181 YVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRKLI 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQ+L++KDQ+ L EP+KELDI+L+Q+AAG+ VDIMPG++DPANF+LPQQPL+RCLFPGS
Sbjct: 241 NGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTAP 360
           S YNTFRSCTNPH F++DN RFLGTSGQNIDDL KYSEAK KL+F+ERTL WRHLAPTAP
Sbjct: 301 SPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVERTLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVM 420
           NTLGCYPFTDRDPFLIE+CPHVYF+GNQDK+D RLIKGSEGQ+VRLI IP+FCE G+AV 
Sbjct: 361 NTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIAVA 420

Query: 421 V 422
           V
Sbjct: 421 V 421

[Close]

BLAST of Spg033040 vs. ExPASy Swiss-Prot
Match: Q9LRE5 (DNA polymerase delta small subunit OS=Oryza sativa subsp. japonica OX=39947 GN=POLD2 PE=2 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 1.1e-184
Identity = 305/413 (73.85%), Postives = 356/413 (86.20%), Query Frame = 0


Query: 9   LQRKQCTYQISDEQYKVQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPHLPVCTVLG 68
           ++RKQ  Y   DE+Y +Q E Y+GQQYSHIYF RLH MR +LH+LV  WKPHLPV TVLG
Sbjct: 1   MERKQAEYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPHLPVTTVLG 60

Query: 69  LEEGKECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLEDESGRVKL 128
           LEEGK+C+IVGTLYKHMKLKP+ILDEYSKERSA PLV+PHNFMHPDDHL+LEDESGRV L
Sbjct: 61  LEEGKDCIIVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRVTL 120

Query: 129 SGAVLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDKYVVFVSGL 188
           +GA+  P+ YVTG+V+ALHGKET  G+FLV DILEAG+PPQI  P I +EDKYVVFVSGL
Sbjct: 121 AGAI-PPAAYVTGVVIALHGKETSAGNFLVEDILEAGIPPQITLPSI-NEDKYVVFVSGL 180

Query: 189 SIGSSISNPLQFQLLIDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRALLNGQHLSAK 248
           SIGS   NPLQFQLLIDHITGHLGDE EQ IA+ IV VV+ GNSV I     NGQ +++K
Sbjct: 181 SIGSEKFNPLQFQLLIDHITGHLGDENEQSIASNIVRVVVAGNSVHISPRFFNGQAVASK 240

Query: 249 DQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRS 308
           DQ+++ EP+KELDI+L QL A LPVD+MPGS+DPANFSLPQQPLHRCLF G++ YNTF S
Sbjct: 241 DQSRIAEPIKELDIMLTQLVASLPVDMMPGSNDPANFSLPQQPLHRCLFAGAATYNTFSS 300

Query: 309 CTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTAPNTLGCYPF 368
           C+NPH FELD+ RF+GTSGQNIDDL KYS+AKDKLEF+ERTL WRHLAPTAPN+LGCYP+
Sbjct: 301 CSNPHQFELDSVRFIGTSGQNIDDLYKYSDAKDKLEFVERTLRWRHLAPTAPNSLGCYPY 360

Query: 369 TDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVMV 422
           TD+DPFL+ESCPHVYF+GNQDK++T+L++G E Q VRLI IPRFC+ GVAVM+
Sbjct: 361 TDKDPFLVESCPHVYFVGNQDKYETQLLQGLEKQKVRLICIPRFCDSGVAVML 411

[Close]

BLAST of Spg033040 vs. ExPASy Swiss-Prot
Match: O93610 (DNA polymerase delta subunit 2 OS=Xenopus laevis OX=8355 GN=pold2 PE=2 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.2e-90
Identity = 178/417 (42.69%), Postives = 256/417 (61.39%), Query Frame = 0


Query: 17  QISDEQYKVQKETYR------GQQYSHIYFARLHLMRTIL-HSLVSKWKPHLPVCTVLGL 76
           ++S+ QY      +R       +QY+HIY  RL  MR +L  S   +W   + V  +  L
Sbjct: 26  RVSNTQYSNCSSIFRLGERTFTRQYAHIYATRLEQMRPLLIKSAKQRWGDDIAVRKLCEL 85

Query: 77  EEGKECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLEDESGRVKLS 136
           + G++C ++GTL+K M+L+P+IL E S+E +  P      ++   D L+LEDE  R+KL 
Sbjct: 86  QGGEKCCVIGTLFKSMELQPSILREISEEHNLLPQPARQKYISDSDELILEDELQRIKLE 145

Query: 137 GAVLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDKYVVFVSGLS 196
           GA  +  + VTG V+A+ G E   G F+V D     LP Q   P + SED++V+  SGL 
Sbjct: 146 GATDVQQL-VTGAVLAVLGAEEDAGKFVVEDFCLTSLPVQSPLPRL-SEDRFVLLTSGLG 205

Query: 197 IGSSISNPLQ-FQLLIDHITGHLGDEKEQGIAAQIVHVVICGN----SVEIPRALLNGQH 256
           +G    + L   QLL+D +TG  G E++QG AA+I  V++ GN    + +   +L   ++
Sbjct: 206 LGGGSGDSLMGLQLLLDLVTGQAGAEEDQGCAARISRVILAGNLLSENTQGKDSLNKAKY 265

Query: 257 LSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYN 316
           LS K Q    E +K LD +L Q++  + VD+MPG+ DP N+ LPQQPLHRC+FP S+ Y+
Sbjct: 266 LSKKTQAASVEAVKMLDEILLQMSGSVSVDVMPGAFDPTNYILPQQPLHRCMFPQSALYS 325

Query: 317 TFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTAPNTLG 376
           T +  TNP+  E+D  RFLGTSGQNI D+ KYS  +D L+ LE TL   HL PTAP+TLG
Sbjct: 326 TLQLVTNPYEAEIDGVRFLGTSGQNIGDIYKYSSMQDYLDILEWTLQVGHLCPTAPDTLG 385

Query: 377 CYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVMV 422
           CYPF   DPF++++CPHVYF G+  KF  + + G+EGQ V L+++P FC    A +V
Sbjct: 386 CYPFYKSDPFILQNCPHVYFCGSAPKFSCKEVTGAEGQRVLLLTVPEFCSTQTACLV 440

[Close]

BLAST of Spg033040 vs. ExPASy Swiss-Prot
Match: O35654 (DNA polymerase delta subunit 2 OS=Mus musculus OX=10090 GN=Pold2 PE=1 SV=2)

HSP 1 Score: 332.8 bits (852), Expect = 6.0e-90
Identity = 179/413 (43.34%), Postives = 256/413 (61.99%), Query Frame = 0


Query: 15  TYQISDEQYKVQKETYRGQQYSHIYFARLHLMRTILHSLVSK-WKPHLPVCTVLGLEEGK 74
           TY  S + +++ + ++  +QY+HIY  RL  MR  L S   + W   + V  +  L+ G+
Sbjct: 31  TYTNSSQPFRLGERSF-NRQYAHIYATRLIQMRPFLVSRAQQHWGSRVEVKKLCELQPGE 90

Query: 75  ECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLEDESGRVKLSGAVL 134
           +C +VGTL+K M L+P+IL E S+E +  P      ++HPDD LVLEDE  R+KL G + 
Sbjct: 91  QCCVVGTLFKAMSLQPSILREISEEHNLVPQPPRSKYIHPDDELVLEDELQRIKLKGTID 150

Query: 135 IPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDKYVVFVSGLSIGSS 194
           + S  VTG V+A+ G     G F V D   A L PQ   P + + D++V+ VSGL +G  
Sbjct: 151 V-SKLVTGTVLAVLGSAKDDGRFQVEDHCFADLAPQKPVPPLDT-DRFVLLVSGLGLGGG 210

Query: 195 ISNP-LQFQLLIDHITGHLGDEKEQGIAAQIVHVVICGN----SVEIPRALLNGQHLSAK 254
                L  QLL+D +TG LGDE EQ  AA +  V++ GN    + +   ++   ++L+ K
Sbjct: 211 GGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHNTQSRDSINKAKYLTKK 270

Query: 255 DQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRS 314
            Q    E +K LD +L QL+A +PVD+MPG  DP N++LPQQPLH C+FP ++AY+T + 
Sbjct: 271 TQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQL 330

Query: 315 CTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTAPNTLGCYPF 374
            TNP+   +D  RFLGTSGQN+ D+ +YS  +D LE LE TL  RH++PTAP+TLGCYPF
Sbjct: 331 VTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPF 390

Query: 375 TDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVMV 422
              DPF+   CPHVYF GN   F +++I+G E Q+V L+++P F     A +V
Sbjct: 391 YKTDPFIFPECPHVYFCGNTPSFGSKIIRGPEDQVVLLVAVPDFSSTQTACLV 440

[Close]

BLAST of Spg033040 vs. ExPASy Swiss-Prot
Match: P49005 (DNA polymerase delta subunit 2 OS=Homo sapiens OX=9606 GN=POLD2 PE=1 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.0e-89
Identity = 179/413 (43.34%), Postives = 255/413 (61.74%), Query Frame = 0


Query: 15  TYQISDEQYKVQKETYRGQQYSHIYFARLHLMRTILHSLVSK-WKPHLPVCTVLGLEEGK 74
           TY  S + +++ + ++  +QY+HIY  RL  MR  L +   + W   + V  +  L+  +
Sbjct: 31  TYTNSSQPFRLGERSF-SRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQPEE 90

Query: 75  ECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLEDESGRVKLSGAVL 134
           +C +VGTL+K M L+P+IL E S+E +  P      ++HPDD LVLEDE  R+KL G + 
Sbjct: 91  KCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLKGTID 150

Query: 135 IPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDKYVVFVSGLSIGSS 194
           + S  VTG V+A+ G     G FLV D   A L PQ   P + + D++V+ VSGL +G  
Sbjct: 151 V-SKLVTGTVLAVFGSVRDDGKFLVEDYCFADLAPQKPAPPLDT-DRFVLLVSGLGLGGG 210

Query: 195 ISNP-LQFQLLIDHITGHLGDEKEQGIAAQIVHVVICGN----SVEIPRALLNGQHLSAK 254
                L  QLL+D +TG LGDE EQ  AA +  V++ GN    S +   ++   ++L+ K
Sbjct: 211 GGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKK 270

Query: 255 DQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRS 314
            Q    E +K LD +L QL+A +PVD+MPG  DP N++LPQQPLH C+FP ++AY+T + 
Sbjct: 271 TQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQL 330

Query: 315 CTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTAPNTLGCYPF 374
            TNP+   +D  RFLGTSGQN+ D+ +YS  +D LE LE TL  RH++PTAP+TLGCYPF
Sbjct: 331 VTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPF 390

Query: 375 TDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVMV 422
              DPF+   CPHVYF GN   F +++I+G E Q V L+++P F     A +V
Sbjct: 391 YKTDPFIFPECPHVYFCGNTPSFGSKIIRGPEDQTVLLVTVPDFSATQTACLV 440

[Close]

BLAST of Spg033040 vs. ExPASy TrEMBL
Match: A0A5A7TKC4 (DNA polymerase delta small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00610 PE=3 SV=1)

HSP 1 Score: 818.9 bits (2114), Expect = 1.0e-233
Identity = 397/432 (91.90%), Postives = 413/432 (95.60%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYQISDEQYKVQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 60
           MEIDS KN+ RKQC Y+ISDEQYK+QKETY+GQQYSHIYFARLHLMRTILHSLVS WKPH
Sbjct: 3   MEIDSPKNVHRKQCNYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 62

Query: 61  LPVCTVLGLEEGKECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLE 120
           LPV TVLGLEEGKECVIVGT+YKHMKLKPTILDEYSKERSA PLV+PHNFMHPDDHLVLE
Sbjct: 63  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 122

Query: 121 DESGRVKLSGAVLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 180
           DESGRVKLSG VL+PSVYVTGIV+ALHGKET VGDFLVLDILEA LPPQIERPLISSEDK
Sbjct: 123 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 182

Query: 181 YVVFVSGLSIGSSISNPLQFQLLIDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRALL 240
           YV+FVSGLSIGSSISNPLQFQLL+DHITGHLGDEKEQGIAAQIVHVVICGNSVEIPR +L
Sbjct: 183 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 242

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Sbjct: 243 NGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 302

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDN RFLGTSGQN+DDLEKYSEAKDKLEF+ERTL WRHLAPTAP
Sbjct: 303 SAYNTFRSCTNPHCFELDNLRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 362

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKG+EGQMVRLI+IPRFCE G+AVM
Sbjct: 363 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIAVM 422

Query: 421 VIFFLFQVFNSP 433
           VI F    FNSP
Sbjct: 423 VICF---YFNSP 431

[Close]

BLAST of Spg033040 vs. ExPASy TrEMBL
Match: A0A0A0LF21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G807320 PE=3 SV=1)

HSP 1 Score: 812.8 bits (2098), Expect = 7.3e-232
Identity = 389/421 (92.40%), Postives = 409/421 (97.15%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYQISDEQYKVQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 60
           MEIDS  N+ RKQCTY++SDEQYK+QKETY+GQQYSHIYFARLHLMRTILHSLVS WKPH
Sbjct: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60

Query: 61  LPVCTVLGLEEGKECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLE 120
           LPV TVLGLEEGKECVIVGT+YKHMKLKPTILDEYSKERSA PLV+PHNFMHPDDHLVLE
Sbjct: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120

Query: 121 DESGRVKLSGAVLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 180
           DESGRVKLSG VL+PSVYVTGIV+ALHGKET VGDFLVLDILEA LPPQIERPLISSEDK
Sbjct: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180

Query: 181 YVVFVSGLSIGSSISNPLQFQLLIDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRALL 240
           YV+FVSGLSIGSSISNPLQFQLL+DHITGHLGDEKEQGIAAQIVHVVICGNSVEIPR +L
Sbjct: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDNFRFLGTSGQN+DDLEKYSEAKDKLEF+ERTL WRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQ+KFDTRL+KG+EGQMVRLI+IPRFCE G+AVM
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420

Query: 421 V 422
           +
Sbjct: 421 L 421

[Close]

BLAST of Spg033040 vs. ExPASy TrEMBL
Match: A0A1S3B7Y0 (DNA polymerase delta small subunit OS=Cucumis melo OX=3656 GN=LOC103486765 PE=3 SV=1)

HSP 1 Score: 812.4 bits (2097), Expect = 9.5e-232
Identity = 390/421 (92.64%), Postives = 407/421 (96.67%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYQISDEQYKVQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 60
           MEIDS KN+ RKQC Y+ISDEQYK+QKETY+GQQYSHIYFARLHLMRTILHSLVS WKPH
Sbjct: 3   MEIDSPKNVHRKQCNYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 62

Query: 61  LPVCTVLGLEEGKECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLE 120
           LPV TVLGLEEGKECVIVGT+YKHMKLKPTILDEYSKERSA PLV+PHNFMHPDDHLVLE
Sbjct: 63  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 122

Query: 121 DESGRVKLSGAVLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 180
           DESGRVKLSG VL+PSVYVTGIV+ALHGKET VGDFLVLDILEA LPPQIERPLISSEDK
Sbjct: 123 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 182

Query: 181 YVVFVSGLSIGSSISNPLQFQLLIDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRALL 240
           YV+FVSGLSIGSSISNPLQFQLL+DHITGHLGDEKEQGIAAQIVHVVICGNSVEIPR +L
Sbjct: 183 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 242

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Sbjct: 243 NGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 302

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDN RFLGTSGQN+DDLEKYSEAKDKLEF+ERTL WRHLAPTAP
Sbjct: 303 SAYNTFRSCTNPHCFELDNLRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 362

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKG+EGQMVRLI+IPRFCE G+AVM
Sbjct: 363 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIAVM 422

Query: 421 V 422
           +
Sbjct: 423 L 423

[Close]

BLAST of Spg033040 vs. ExPASy TrEMBL
Match: A0A5D3DQ54 (DNA polymerase delta small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005420 PE=3 SV=1)

HSP 1 Score: 812.0 bits (2096), Expect = 1.2e-231
Identity = 390/423 (92.20%), Postives = 408/423 (96.45%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYQISDEQYKVQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 60
           MEIDS KN+ RKQC Y+ISDEQYK+QKETY+GQQYSHIYFARLHLMRTILHSLVS WKPH
Sbjct: 3   MEIDSPKNVHRKQCNYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 62

Query: 61  LPVCTVLGLEEGKECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLE 120
           LPV TVLGLEEGKECVIVGT+YKHMKLKPTILDEYSKERSA PLV+PHNFMHPDDHLVLE
Sbjct: 63  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 122

Query: 121 DESGRVKLSGAVLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 180
           DESGRVKLSG VL+PSVYVTGIV+ALHGKET VGDFLVLDILEA LPPQIERPLISSEDK
Sbjct: 123 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 182

Query: 181 YVVFVSGLSIGSSISNPLQFQLLIDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRALL 240
           YV+FVSGLSIGSSISNPLQFQLL+DHITGHLGDEKEQGIAAQIVHVVICGNSVEIPR +L
Sbjct: 183 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 242

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDI LNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS
Sbjct: 243 NGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 302

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDN RFLGTSGQN+DDLEKYSEAKDKLEF+ERTL WRHLAPTAP
Sbjct: 303 SAYNTFRSCTNPHCFELDNLRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 362

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKG+EGQMVRLI+IPRFCE G+AVM
Sbjct: 363 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIAVM 422

Query: 421 VIF 424
            ++
Sbjct: 423 HLY 425

[Close]

BLAST of Spg033040 vs. ExPASy TrEMBL
Match: A0A6J1J5X9 (DNA polymerase delta small subunit OS=Cucurbita maxima OX=3661 GN=LOC111481642 PE=3 SV=1)

HSP 1 Score: 805.4 bits (2079), Expect = 1.2e-229
Identity = 387/421 (91.92%), Postives = 405/421 (96.20%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYQISDEQYKVQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 60
           MEIDSQKNLQRKQCTY+I DEQYK+QKETY+GQQYSHIYF RLHL+RTILHSLVSKWKPH
Sbjct: 1   MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH 60

Query: 61  LPVCTVLGLEEGKECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLE 120
           LPV TVL LEEGKECVIVGTLYKHMKLKPTILDEYSKERS TPLV+PHNFMHPDD+LVLE
Sbjct: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120

Query: 121 DESGRVKLSGAVLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 180
           D+SGRVKLSGAVL+PSVY TGI+VALHGKETCVGDF V DILEAGLPPQIERPLI +EDK
Sbjct: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180

Query: 181 YVVFVSGLSIGSSISNPLQFQLLIDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRALL 240
           YVVFVSGLSIGSS SNPLQFQLL+DHITGHLGDEKEQGIAAQ+VHVVI GNSVEIPR LL
Sbjct: 181 YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDILLNQLAAGL VDIMPG SDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDNFRFLGTSGQN+DDL+KYSEAKDKLEF+ER+L WRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLI+IPRFCE GVAVM
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420

Query: 421 V 422
           +
Sbjct: 421 L 421

[Close]

BLAST of Spg033040 vs. TAIR 10
Match: AT2G42120.2 (DNA polymerase delta small subunit )

HSP 1 Score: 692.6 bits (1786), Expect = 2.1e-199
Identity = 323/421 (76.72%), Postives = 375/421 (89.07%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYQISDEQYKVQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPH 60
           MEIDS+K  +RKQ  Y   DE++++QKE YRGQQYS IYFARLHLMRT+L+SL   WK H
Sbjct: 1   MEIDSEKIHERKQSDYNSLDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKSH 60

Query: 61  LPVCTVLGLEEGKECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVLE 120
           LPVC VLGLE+GKEC+IVGTL+KHMKLKP +LDEYSKERS TPLV+PHNFMHPDD+L+LE
Sbjct: 61  LPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILE 120

Query: 121 DESGRVKLSGAVLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDK 180
           DESGRVKL+G+ L P++YVTG+VVALHGKET  G+F V D+LEAGLPPQIERP+   EDK
Sbjct: 121 DESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQEDK 180

Query: 181 YVVFVSGLSIGSSISNPLQFQLLIDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRALL 240
           YVV +SGL IGS  +NPLQFQLL+DHITGHLGDE+EQG+AAQIVHVVI GNS E PR L+
Sbjct: 181 YVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRKLI 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300
           NGQ+L++KDQ+ L EP+KELDI+L+Q+AAG+ VDIMPG++DPANF+LPQQPL+RCLFPGS
Sbjct: 241 NGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTAP 360
           S YNTFRSCTNPH F++DN RFLGTSGQNIDDL KYSEAK KL+F+ERTL WRHLAPTAP
Sbjct: 301 SPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVERTLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAVM 420
           NTLGCYPFTDRDPFLIE+CPHVYF+GNQDK+D RLIKGSEGQ+VRLI IP+FCE G+AV 
Sbjct: 361 NTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIAVA 420

Query: 421 V 422
           V
Sbjct: 421 V 421

[Close]

BLAST of Spg033040 vs. TAIR 10
Match: AT2G42120.1 (DNA polymerase delta small subunit )

HSP 1 Score: 690.3 bits (1780), Expect = 1.1e-198
Identity = 323/422 (76.54%), Postives = 376/422 (89.10%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTY-QISDEQYKVQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKP 60
           MEIDS+K  +RKQ  Y  + DE++++QKE YRGQQYS IYFARLHLMRT+L+SL   WK 
Sbjct: 1   MEIDSEKIHERKQSDYNSLQDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKS 60

Query: 61  HLPVCTVLGLEEGKECVIVGTLYKHMKLKPTILDEYSKERSATPLVQPHNFMHPDDHLVL 120
           HLPVC VLGLE+GKEC+IVGTL+KHMKLKP +LDEYSKERS TPLV+PHNFMHPDD+L+L
Sbjct: 61  HLPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLIL 120

Query: 121 EDESGRVKLSGAVLIPSVYVTGIVVALHGKETCVGDFLVLDILEAGLPPQIERPLISSED 180
           EDESGRVKL+G+ L P++YVTG+VVALHGKET  G+F V D+LEAGLPPQIERP+   ED
Sbjct: 121 EDESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQED 180

Query: 181 KYVVFVSGLSIGSSISNPLQFQLLIDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRAL 240
           KYVV +SGL IGS  +NPLQFQLL+DHITGHLGDE+EQG+AAQIVHVVI GNS E PR L
Sbjct: 181 KYVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRKL 240

Query: 241 LNGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPG 300
           +NGQ+L++KDQ+ L EP+KELDI+L+Q+AAG+ VDIMPG++DPANF+LPQQPL+RCLFPG
Sbjct: 241 INGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPG 300

Query: 301 SSAYNTFRSCTNPHCFELDNFRFLGTSGQNIDDLEKYSEAKDKLEFLERTLSWRHLAPTA 360
           SS YNTFRSCTNPH F++DN RFLGTSGQNIDDL KYSEAK KL+F+ERTL WRHLAPTA
Sbjct: 301 SSPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVERTLRWRHLAPTA 360

Query: 361 PNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLISIPRFCEKGVAV 420
           PNTLGCYPFTDRDPFLIE+CPHVYF+GNQDK+D RLIKGSEGQ+VRLI IP+FCE G+AV
Sbjct: 361 PNTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIAV 420

Query: 421 MV 422
            V
Sbjct: 421 AV 422

The following BLAST results are available for this feature:

BLAST of Spg033040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906226.1	1.3e-235	94.06	DNA polymerase delta small subunit isoform X3 [Benincasa hispida]	[more]
KAA0043732.1	2.1e-233	91.90	DNA polymerase delta small subunit [Cucumis melo var. makuwa]	[more]
XP_004136567.1	1.5e-231	92.40	DNA polymerase delta small subunit [Cucumis sativus] >KGN59302.1 hypothetical pr...	[more]
XP_038906224.1	1.5e-231	89.57	DNA polymerase delta small subunit isoform X1 [Benincasa hispida]	[more]
XP_008443055.1	2.0e-231	92.64	PREDICTED: DNA polymerase delta small subunit [Cucumis melo]	[more]

BLAST of Spg033040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48520	3.0e-198	76.72	DNA polymerase delta small subunit OS=Arabidopsis thaliana OX=3702 GN=POLD2 PE=2...	[more]
Q9LRE5	1.1e-184	73.85	DNA polymerase delta small subunit OS=Oryza sativa subsp. japonica OX=39947 GN=P...	[more]
O93610	1.2e-90	42.69	DNA polymerase delta subunit 2 OS=Xenopus laevis OX=8355 GN=pold2 PE=2 SV=1	[more]
O35654	6.0e-90	43.34	DNA polymerase delta subunit 2 OS=Mus musculus OX=10090 GN=Pold2 PE=1 SV=2	[more]
P49005	1.0e-89	43.34	DNA polymerase delta subunit 2 OS=Homo sapiens OX=9606 GN=POLD2 PE=1 SV=1	[more]

BLAST of Spg033040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TKC4	1.0e-233	91.90	DNA polymerase delta small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A0A0LF21	7.3e-232	92.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G807320 PE=3 SV=1	[more]
A0A1S3B7Y0	9.5e-232	92.64	DNA polymerase delta small subunit OS=Cucumis melo OX=3656 GN=LOC103486765 PE=3 ...	[more]
A0A5D3DQ54	1.2e-231	92.20	DNA polymerase delta small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1J5X9	1.2e-229	91.92	DNA polymerase delta small subunit OS=Cucurbita maxima OX=3661 GN=LOC111481642 P...	[more]

BLAST of Spg033040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42120.2	2.1e-199	76.72	DNA polymerase delta small subunit	[more]
AT2G42120.1	1.1e-198	76.54	DNA polymerase delta small subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007185	DNA polymerase alpha/delta/epsilon, subunit B	PFAM	PF04042	DNA_pol_E_B	coord: 182..393 e-value: 4.5E-49 score: 166.7
None	No IPR available	GENE3D	2.40.50.430		coord: 40..164 e-value: 4.7E-35 score: 122.1
None	No IPR available	GENE3D	3.60.21.50		coord: 169..428 e-value: 2.2E-104 score: 350.8
IPR040663	DNA polymerase delta subunit, OB-fold domain	PFAM	PF18018	DNA_pol_D_N	coord: 34..161 e-value: 9.4E-39 score: 132.5
IPR024826	DNA polymerase delta/II small subunit family	PANTHER	PTHR10416	DNA POLYMERASE DELTA SUBUNIT 2	coord: 5..421
IPR041863	DNA polymerase delta subunit 2, C-terminal domain	CDD	cd07387	MPP_PolD2_C	coord: 181..421 e-value: 1.99489E-126 score: 365.039

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg033040.1	Spg033040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006271	DNA strand elongation involved in DNA replication
biological_process	GO:0006260	DNA replication
cellular_component	GO:0043625	delta DNA polymerase complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003677	DNA binding