Spg032965 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg032965
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Retrotrans_gag domain-containing protein
Location	scaffold11: 13783674 .. 13786176 (+)
RNA-Seq Expression	Spg032965
Synteny	Spg032965

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACATCGTAGAGCTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTCGATTTGTCATGTTAGTTAAGATGTTTTATATAATTGATATGTCTTGCTAGATTTTAATGACGTACTTGCGGAATATTTGAGAAAGCTTTTATCATTACACGTTTATGTTTAACGCTTTGATTGAATGGATTTATACGTTTAAAGGTTTATCACGTGTTATGATTTTCGAATTTACAGTTTTAAATTTAGTCACTCACTGGGCTTCATAGCTCACTCTTTCAAAATGTTTTCCCACTTTCCAGGTAGAGATCGAGCTCCCGGTGCTTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTACATTGAGTCTGTCTATATTGTAAATTTTTTTGTAAGGATTAGAAAATTTACGGTTTGTGTAAGTTCTAAGGTCGTGGTTGTATAAACCCCAGTTGAATATGTTTTTGGTTGTGATATCTATACCAGGTTACTTTCCAAACCGCGTTATGTCAGGGCTGCACCCCATGTATGTCTAAAGTTTTCAAGGATTCCGTTGTGTTGTGTTACATGTAAAGTACTTTACATCAAAGATTAATATGTTTATCAGGTTTAACGTTTCAGTAGGGTCAACAGGGATCTTTAGAGGAGGACGATGTCTGTTGGCTTCACGTCATCTCCCTGACTAAGCTAGCAGGTAGTTTGGGAGGGGGTGTGACATTATATATAGGTAAAGGCCAAGACCTTTTCCTAATAGGAAAAGGTCTATGAATAAGTTCAAATCTATTATCTTATTCATATCTACTTTTAATATATAATTAATTAATTACGCAATTAAATATCACATATTTAGTCTTTGGGATTTTATTAAAATTTAAATTAATATGAATCCAATTCATATTAAATTTATTTGAACTCTTTCAAATATTTTCTCTCAAGAATTAATTTTTGAAATTAATTCAAAAATTATATTATAAAGTTTCATAAACTTTATAATATAATGTATCGACATACATTATACGAATCTCCTAAATAAATTGAACACTTTCAATTTACAATTAATTGCCTCAAGTCTCTTTACGGGCTATCAGAAGCTCCAACGATACAAGACTAATTGGCTAAACTCATTAACCAAGTTAGTCAACATTCGTTAACTGTGGGTCATTCCACTAAAGACCCACTGCTGCACTCTTTTCACTGCAGAATATTTTTGTGTCCACGAATATCGACCAATAACGACAAGTCAGTCCTTCACGTGTGTTCGTATCCCAGCTGGGTCAAATTACCGTTTTACCCCTGACTAAGCTAGCAGGTAGTTTGGGAGGAGGTGTGACAACTTGGTATCAGAGCAGTTAGCTCCATGGGAAATGAGACATGGTAGTTAGTACTAAGAAGAATCTAGGAAGTAAATAGTTAGACGTAGAGTCAGTTCAGATAGAACTAGAGGAGTACGGTCCAAGTATTGTTGAGAGTGAGTCCAGTCAGGACTAGAATGTGGGTAGAAGTTTAGTATCAGGCATCTGAGTTAAGTATCTATAGCATGTCTGATGTGTTGATATGTTATAGGAGTCATGCCAACACGAACCAGCAGACGAGGCAGGCAGAATCAGGACGGGACGCAGGATCCTACCCAGAGTCAATCTGAAAGGGGATCCAGTACCCCGAGATGTCTGAATCAGGCAAGGAGTGAGCTGTTTGCTAGATTTGCACAGGAGGTCGGTAGGCTAGAGAGAGCAGGGCCTAGTGATCTGGAAAAGATGTATGGGATAAAACGGCTGAAGAAGTTAGGAGCCACAGTGTTTGAGGGTTCCACAGATCCAGCTAACGTCGAGGTTTGGTTAAATATGCTGGAGAAATGCTTCGACGTGATGAGTTGTCCTGAGGAGCGAAAAATCAGATTAGCCACATTCCTTCTACAGAAGGAGGCGGAGGGATGGTGGAAATCCATTTTAGCCAGGCGCAGTGATGCACGTACGTTAGACTGGCAGACTTTCAGAGGCATATTCGAGGATAAGTATTATCCCACCACATATTGTGAGGCAAAGAGAGACGAGTTTCTGGGGCTGAAGCAAGGGTCACTTTCAGTGGTCGAGTACGAGAGAAAGTATACAGAGCTTTCACGGTATGTCGATGTGATTGTGGCATTTGAGAGTGACAGGTGTCGAAGGTTTGAAAGAGGGCTGCGTTTTGAGATACGTACCCCGATTACCGCTATTGCCAAGTGGACGGATTTTTCCCAGCTAGTAGAGACTACCTTACGTGTGGAGCAGAGTATAATAGAGGAAAAGTCGACAGTGGAGCCTAGTCGTGAAGCTCCAACAGATAGTGGTTTCCGAGGTCGTGAGCTGGAGCGAATGTTTCAGGCCGTCAAGACTTCAAGTGTCGATCTGGTGGCCAGTCATCGAGGCAGCTGA

mRNA sequence

TATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACATCGTAGAGCTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTCGATTTGTCATGTTACTTTCCAAACCGCGTTATGTCAGGGCTGCACCCCATGGTCAACAGGGATCTTTAGAGGAGGACGATGTCTGTTGGCTTCACGTCATCTCCCTGACTAAGCTAGCAGGAGTCATGCCAACACGAACCAGCAGACGAGGCAGGCAGAATCAGGACGGGACGCAGGATCCTACCCAGAGTCAATCTGAAAGGGGATCCAGTACCCCGAGATGTCTGAATCAGGCAAGGAGTGAGCTGTTTGCTAGATTTGCACAGGAGATACGTACCCCGATTACCGCTATTGCCAAGTGGACGGATTTTTCCCAGCTAGTAGAGACTACCTTACGTGTGGAGCAGAGTATAATAGAGGAAAAGTCGACAGTGGAGCCTAGTCGTGAAGCTCCAACAGATAGTGGTTTCCGAGGTCGTGAGCTGGAGCGAATGTTTCAGGCCGTCAAGACTTCAAGTGTCGATCTGGTGGCCAGTCATCGAGGCAGCTGA

Coding sequence (CDS)

TATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACATCGTAGAGCTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTCGATTTGTCATGTTACTTTCCAAACCGCGTTATGTCAGGGCTGCACCCCATGGTCAACAGGGATCTTTAGAGGAGGACGATGTCTGTTGGCTTCACGTCATCTCCCTGACTAAGCTAGCAGGAGTCATGCCAACACGAACCAGCAGACGAGGCAGGCAGAATCAGGACGGGACGCAGGATCCTACCCAGAGTCAATCTGAAAGGGGATCCAGTACCCCGAGATGTCTGAATCAGGCAAGGAGTGAGCTGTTTGCTAGATTTGCACAGGAGATACGTACCCCGATTACCGCTATTGCCAAGTGGACGGATTTTTCCCAGCTAGTAGAGACTACCTTACGTGTGGAGCAGAGTATAATAGAGGAAAAGTCGACAGTGGAGCCTAGTCGTGAAGCTCCAACAGATAGTGGTTTCCGAGGTCGTGAGCTGGAGCGAATGTTTCAGGCCGTCAAGACTTCAAGTGTCGATCTGGTGGCCAGTCATCGAGGCAGCTGA

Protein sequence

YIPLLTLSVLRDNDAVVSAGRAPLHRRASKRWLYWACPTQRRFVMLLSKPRYVRAAPHGQQGSLEEDDVCWLHVISLTKLAGVMPTRTSRRGRQNQDGTQDPTQSQSERGSSTPRCLNQARSELFARFAQEIRTPITAIAKWTDFSQLVETTLRVEQSIIEEKSTVEPSREAPTDSGFRGRELERMFQAVKTSSVDLVASHRGS

Homology

[Close]

BLAST of Spg032965 vs. NCBI nr
Match: KAA0056353.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 115.9 bits (289), Expect = 4.0e-22
Identity = 90/257 (35.02%), Postives = 98/257 (38.13%), Query Frame = 0


Query: 59  GQQGSLEEDDVCWLHVISLTKLAG---------VMPTRTSRRGRQNQDGTQDPTQSQSER 118
           G  G +  DDVCWLH +   K  G         VMP RTS+R RQNQDGTQDPTQ QSER
Sbjct: 31  GSVGIVRGDDVCWLHTVFRAKTTGVVREGVGQLVMPPRTSKRHRQNQDGTQDPTQGQSER 90

Query: 119 GSSTPRCLNQARSELFARFAQEI------------------------------------- 178
           GSSTPR  N+A SE F+R AQEI                                     
Sbjct: 91  GSSTPRGQNEAGSERFSRSAQEIGRPEKAGPSDPEKMYGIERLKKLEATVFDGSTDLADA 150

Query: 179 ------------------------------------------------------------ 194
                                                                       
Sbjct: 151 EVWRNDARTLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQESLSVVEYERKYAEMIVAF 210

[Close]

BLAST of Spg032965 vs. NCBI nr
Match: KAA0037515.1 (uncharacterized protein E6C27_scaffold277G001260 [Cucumis melo var. makuwa] >TYK01990.1 uncharacterized protein E5676_scaffold808G001020 [Cucumis melo var. makuwa])

HSP 1 Score: 113.6 bits (283), Expect = 2.0e-21
Identity = 105/332 (31.63%), Postives = 117/332 (35.24%), Query Frame = 0


Query: 4   LLTLSVLRDNDAVVSAGRAPLHRRASKRWLYWACPTQRRFVMLLSKPRYVRAAPHGQQGS 63
           LLTL+VL DNDA+V                    P      M          +     G 
Sbjct: 120 LLTLTVLCDNDAIVEI----------------ELPVSDTLPMSAES----SGSNSRSAGI 179

Query: 64  LEEDDVCWLHVISLTKLA------------GVMPTRTSRRGRQNQDGTQDPTQSQSERGS 123
           + EDDVCWLHV+   K A            GVMP R+SRR RQN+D TQDPTQ QSERGS
Sbjct: 180 VREDDVCWLHVVFRVKTAGGPGGGVTTWYQGVMPPRSSRRRRQNKDETQDPTQGQSERGS 239

Query: 124 STPRCLNQARSELFARFAQ----------------------------------------- 183
           STPR  N+ARSE FAR AQ                                         
Sbjct: 240 STPRGQNEARSERFARSAQEIGRPEKAGPSDPEKMYGIERLKKLEATVFEGSTDLADAKK 299

Query: 184 ------------------------------------------------------------ 194
                                                                       
Sbjct: 300 EAEGWWKSIIARRNDARTLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQGSLSMAEYER 359

[Close]

BLAST of Spg032965 vs. NCBI nr
Match: KAA0051980.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK04577.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 112.5 bits (280), Expect = 4.4e-21
Identity = 109/333 (32.73%), Postives = 119/333 (35.74%), Query Frame = 0


Query: 4   LLTLSVLRDNDAVVS---------AGRAPLHRRASKRWLYWACPTQRRFV---------- 63
           L TLSVLRDNDAVV             A      S  WL         FV          
Sbjct: 51  LSTLSVLRDNDAVVEIELPVPDTLPTSAESSGSNSSTWL----ELNFEFVHVEIFYYFTN 110

Query: 64  MLLSKPRYVRAAPHGQQGSLEEDDVCWLHVISLTKLA-----GVMPTRTSRRGRQNQDGT 123
            ++S    V     G    +  D+VCWLH +   K A     GVMP RTSRR RQNQD  
Sbjct: 111 QVMSGLHLVFNVSVGSTRIVRGDNVCWLHAVFWAKTAGGPGGGVMPPRTSRRRRQNQDRM 170

Query: 124 QDPTQSQSERGSSTPRCLNQARSELFARFAQ----------------------------- 183
           QDPTQ QSERGSSTPR  N+A SE F R AQ                             
Sbjct: 171 QDPTQGQSERGSSTPRGQNEAGSERFVRSAQEIGRSERARPSDPEKMYGIERLKELGATV 230

Query: 184 ------------------------------------------------------------ 194
                                                                       
Sbjct: 231 FVGSTDLADAEVWHNDARTLDWQTFRGIFEEKYYPTTCCEAKRDEFLELKQGSLSVAKYK 290

[Close]

BLAST of Spg032965 vs. NCBI nr
Match: TYK00845.1 (zf-CCHC domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-20
Identity = 89/226 (39.38%), Postives = 101/226 (44.69%), Query Frame = 0


Query: 3   PLLTLSVLRDNDAVVSAGRAPLHRRASKRWLYWACPTQRRFVMLLSKPRYVRAAPHGQQG 62
           PL TLSVLRDNDAV                       +      LS       +     G
Sbjct: 51  PLSTLSVLRDNDAVAE--------------------IELPVPDTLSTSAESSGSNSRSAG 110

Query: 63  SLEEDDVCWLHVISLTKLAG--------VMPTRTSRRGRQNQDGTQDPT-QSQSERGSST 122
            +  DDVCWLH I   K+ G             T ++  Q + G    +   QSERGSST
Sbjct: 111 IVRGDDVCWLHAIFRAKIVGGPGGGVTTWSHATTYQQTTQAESGWDAGSYPGQSERGSST 170

Query: 123 PRCLNQARSELFARFAQ--------------------------EIRTPITAIAKWTDFSQ 182
           PR  N+A SE FAR AQ                          EIRT +T IAKW DFSQ
Sbjct: 171 PRDQNEAGSERFARSAQEIGRQEKAWPSDPEKMCCRFERGLRFEIRTLVTVIAKWMDFSQ 230

Query: 183 LVETTLRVEQSIIEEKSTVEPSREAPTDSGFRGRELERMFQAVKTS 194
           LVET LRVEQSI+EEKS +E SR   T SG RGRE  R    V  S
Sbjct: 231 LVETALRVEQSIVEEKSAMELSRGVSTTSGIRGREQRRFTPGVSVS 256

[Close]

BLAST of Spg032965 vs. NCBI nr
Match: TYK27372.1 (uncharacterized protein E5676_scaffold325G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-20
Identity = 84/197 (42.64%), Postives = 99/197 (50.25%), Query Frame = 0


Query: 4   LLTLSVLRDNDAVVSAGRAPLHRRASKRW--------------------------LYWAC 63
           L TLSVL DND VVSAGRA L +R   RW                            W+C
Sbjct: 119 LSTLSVLCDNDDVVSAGRALLRQR---RWECQVEIELPVPDTLPTSAKVSDQTPVRGWSC 178

Query: 64  ----PTQRRFVMLLSKPRYVRAAPH----GQQGSLEEDDVCWLHVISLTKLA-----GVM 123
                  + FV L  KP  VRAA +    G  G +  DDVC +H +   K A     GVM
Sbjct: 179 ILSLSMLKCFVRLFYKPSDVRAASYVCWEGSAGIVRGDDVCSIHAVFQAKTAGAPGGGVM 238

Query: 124 PTRTSRRGRQNQDGTQDPTQSQSERGSSTPRCLNQARSELFARFAQEIRTPITAIAKWTD 162
           P RTSRR RQNQDGTQDPTQ QSE GSSTPR  N+A  E FAR AQEI  P  A     +
Sbjct: 239 PPRTSRRRRQNQDGTQDPTQGQSESGSSTPRGQNEAGREQFARSAQEIGRPKKAEPSDRE 298

[Close]

BLAST of Spg032965 vs. ExPASy TrEMBL
Match: A0A5A7UKD3 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G00860 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.9e-22
Identity = 90/257 (35.02%), Postives = 98/257 (38.13%), Query Frame = 0


Query: 59  GQQGSLEEDDVCWLHVISLTKLAG---------VMPTRTSRRGRQNQDGTQDPTQSQSER 118
           G  G +  DDVCWLH +   K  G         VMP RTS+R RQNQDGTQDPTQ QSER
Sbjct: 31  GSVGIVRGDDVCWLHTVFRAKTTGVVREGVGQLVMPPRTSKRHRQNQDGTQDPTQGQSER 90

Query: 119 GSSTPRCLNQARSELFARFAQEI------------------------------------- 178
           GSSTPR  N+A SE F+R AQEI                                     
Sbjct: 91  GSSTPRGQNEAGSERFSRSAQEIGRPEKAGPSDPEKMYGIERLKKLEATVFDGSTDLADA 150

Query: 179 ------------------------------------------------------------ 194
                                                                       
Sbjct: 151 EVWRNDARTLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQESLSVVEYERKYAEMIVAF 210

[Close]

BLAST of Spg032965 vs. ExPASy TrEMBL
Match: A0A5D3BSA6 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G001020 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 9.6e-22
Identity = 105/332 (31.63%), Postives = 117/332 (35.24%), Query Frame = 0


Query: 4   LLTLSVLRDNDAVVSAGRAPLHRRASKRWLYWACPTQRRFVMLLSKPRYVRAAPHGQQGS 63
           LLTL+VL DNDA+V                    P      M          +     G 
Sbjct: 120 LLTLTVLCDNDAIVEI----------------ELPVSDTLPMSAES----SGSNSRSAGI 179

Query: 64  LEEDDVCWLHVISLTKLA------------GVMPTRTSRRGRQNQDGTQDPTQSQSERGS 123
           + EDDVCWLHV+   K A            GVMP R+SRR RQN+D TQDPTQ QSERGS
Sbjct: 180 VREDDVCWLHVVFRVKTAGGPGGGVTTWYQGVMPPRSSRRRRQNKDETQDPTQGQSERGS 239

Query: 124 STPRCLNQARSELFARFAQ----------------------------------------- 183
           STPR  N+ARSE FAR AQ                                         
Sbjct: 240 STPRGQNEARSERFARSAQEIGRPEKAGPSDPEKMYGIERLKKLEATVFEGSTDLADAKK 299

Query: 184 ------------------------------------------------------------ 194
                                                                       
Sbjct: 300 EAEGWWKSIIARRNDARTLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQGSLSMAEYER 359

[Close]

BLAST of Spg032965 vs. ExPASy TrEMBL
Match: A0A5A7U9X4 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002130 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.1e-21
Identity = 109/333 (32.73%), Postives = 119/333 (35.74%), Query Frame = 0


Query: 4   LLTLSVLRDNDAVVS---------AGRAPLHRRASKRWLYWACPTQRRFV---------- 63
           L TLSVLRDNDAVV             A      S  WL         FV          
Sbjct: 51  LSTLSVLRDNDAVVEIELPVPDTLPTSAESSGSNSSTWL----ELNFEFVHVEIFYYFTN 110

Query: 64  MLLSKPRYVRAAPHGQQGSLEEDDVCWLHVISLTKLA-----GVMPTRTSRRGRQNQDGT 123
            ++S    V     G    +  D+VCWLH +   K A     GVMP RTSRR RQNQD  
Sbjct: 111 QVMSGLHLVFNVSVGSTRIVRGDNVCWLHAVFWAKTAGGPGGGVMPPRTSRRRRQNQDRM 170

Query: 124 QDPTQSQSERGSSTPRCLNQARSELFARFAQ----------------------------- 183
           QDPTQ QSERGSSTPR  N+A SE F R AQ                             
Sbjct: 171 QDPTQGQSERGSSTPRGQNEAGSERFVRSAQEIGRSERARPSDPEKMYGIERLKELGATV 230

Query: 184 ------------------------------------------------------------ 194
                                                                       
Sbjct: 231 FVGSTDLADAEVWHNDARTLDWQTFRGIFEEKYYPTTCCEAKRDEFLELKQGSLSVAKYK 290

[Close]

BLAST of Spg032965 vs. ExPASy TrEMBL
Match: A0A5D3DV36 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00500 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 6.2e-21
Identity = 84/197 (42.64%), Postives = 99/197 (50.25%), Query Frame = 0


Query: 4   LLTLSVLRDNDAVVSAGRAPLHRRASKRW--------------------------LYWAC 63
           L TLSVL DND VVSAGRA L +R   RW                            W+C
Sbjct: 119 LSTLSVLCDNDDVVSAGRALLRQR---RWECQVEIELPVPDTLPTSAKVSDQTPVRGWSC 178

Query: 64  ----PTQRRFVMLLSKPRYVRAAPH----GQQGSLEEDDVCWLHVISLTKLA-----GVM 123
                  + FV L  KP  VRAA +    G  G +  DDVC +H +   K A     GVM
Sbjct: 179 ILSLSMLKCFVRLFYKPSDVRAASYVCWEGSAGIVRGDDVCSIHAVFQAKTAGAPGGGVM 238

Query: 124 PTRTSRRGRQNQDGTQDPTQSQSERGSSTPRCLNQARSELFARFAQEIRTPITAIAKWTD 162
           P RTSRR RQNQDGTQDPTQ QSE GSSTPR  N+A  E FAR AQEI  P  A     +
Sbjct: 239 PPRTSRRRRQNQDGTQDPTQGQSESGSSTPRGQNEAGREQFARSAQEIGRPKKAEPSDRE 298

[Close]

BLAST of Spg032965 vs. ExPASy TrEMBL
Match: A0A5A7TPS6 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G001810 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 6.2e-21
Identity = 84/197 (42.64%), Postives = 99/197 (50.25%), Query Frame = 0


Query: 4   LLTLSVLRDNDAVVSAGRAPLHRRASKRW--------------------------LYWAC 63
           L TLSVL DND VVSAGRA L +R   RW                            W+C
Sbjct: 145 LSTLSVLCDNDDVVSAGRALLRQR---RWECQVEIELPVPDTLPTSAKVSDQTPVRGWSC 204

Query: 64  ----PTQRRFVMLLSKPRYVRAAPH----GQQGSLEEDDVCWLHVISLTKLA-----GVM 123
                  + FV L  KP  VRAA +    G  G +  DDVC +H +   K A     GVM
Sbjct: 205 ILSLSMLKCFVRLFYKPSDVRAASYVCWEGSAGIVRGDDVCSIHAVFQAKTAGAPGGGVM 264

Query: 124 PTRTSRRGRQNQDGTQDPTQSQSERGSSTPRCLNQARSELFARFAQEIRTPITAIAKWTD 162
           P RTSRR RQNQDGTQDPTQ QSE GSSTPR  N+A  E FAR AQEI  P  A     +
Sbjct: 265 PPRTSRRRRQNQDGTQDPTQGQSESGSSTPRGQNEAGREQFARSAQEIGRPKKAEPSDRE 324

The following BLAST results are available for this feature:

BLAST of Spg032965 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0056353.1	4.0e-22	35.02	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0037515.1	2.0e-21	31.63	uncharacterized protein E6C27_scaffold277G001260 [Cucumis melo var. makuwa] >TYK...	[more]
KAA0051980.1	4.4e-21	32.73	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK04577.1 D...	[more]
TYK00845.1	1.3e-20	39.38	zf-CCHC domain-containing protein [Cucumis melo var. makuwa]	[more]
TYK27372.1	1.3e-20	42.64	uncharacterized protein E5676_scaffold325G00500 [Cucumis melo var. makuwa]	[more]

BLAST of Spg032965 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg032965 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UKD3	1.9e-22	35.02	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3BSA6	9.6e-22	31.63	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7U9X4	2.1e-21	32.73	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3DV36	6.2e-21	42.64	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7TPS6	6.2e-21	42.64	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Spg032965 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 85..116
IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	CDD	cd00082	HisKA	coord: 118..139 e-value: 0.00541996 score: 32.5696

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg032965.1	Spg032965.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0000155	phosphorelay sensor kinase activity