
Spg032953 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGAAACCTAGGCGACGGCGACTACCAGGTGACGACGGCGGAAACTTCAGAAAACGGCGGGTACCAGCAACGGCAGAGACGACGGTGGCTACGGTGCGAGCAGAATTAGAGTAAAGGGATAAGAAGCGGCTTAAAACATTTGTAGAGAAGCAATGCACCGAGATACGGGTAAATGATGTGTGAATAGGACGGAATGATGGACGCAAGAGAAGTGGACGAAGTACTACTGAAGGTGTTAGACTCCTCTCTTTCTCAAATCAAATGGCGTCTCAAATTTCCAGCCAAGCGTCGCCTCCAAATAGGTCAATTTCTACCTCTTTCAATTTTTTGGTGTTTCCTAATCTTTCCTCCCTAGCAACCTCGGTTCCATTTCCCCCCCTTCTGTTGCTGGGTTTCGATTTATGGGTTATTCGAAATTATCAACCCAACATGCTGATGAGTTATGATTATTGCATAGTTGAAAGTTTTCGAGCGTCAGCTCATTGATATATCAAATTCAAATTGTATAGTTATGAAAGTTAATCAACCAGTTTGTAATACTTTTATTTCATACAACAGATTTATGTTGTATTTAACTCTTCGAAGTCTGCTTGATCATTTTCTTAATAAGAAAGACTTCTCTTCGTGATCATTTCCTCGGTATTTTTTTATATTTTAGTTGGTATCAGAGCCAACCGCTTAACAGCATTGGCTTCTTCAAATACTTGTTTCTTGAATAATAGTTCCAATAAAATTCCTGGACAAAGTTCTTTAGTTGCGAATCCTGGACGTCAGATCTCAATAGTAAACTTGACCGACGACAATTAATTGGTCCGGAAGTACCTTACTTTACAATCGAAGGGCATGATCTTGGGAAACATATTGATGGTAGCAGTAAACCTCCTCAATTTCTTCCAAGAAGTGTATCCTGA ATGCTGAAACCTAGGCGACGGCGACTACCAGGTGACGACGGCGGAAACTTCAGAAAACGGCGGGACGGAATGATGGACGCAAGAGAAGTGGACGAAGTACTACTGAAGGTGTTAGACTCCTCTCTTTCTCAAATCAAATGGCGTCTCAAATTTCCAGCCAAGCGTCGCCTCCAAATAGATCTCAATAGTAAACTTGACCGACGACAATTAATTGGTCCGGAAGTACCTTACTTTACAATCGAAGGGCATGATCTTGGGAAACATATTGATGGTAGCAGTAAACCTCCTCAATTTCTTCCAAGAAGTGTATCCTGA ATGCTGAAACCTAGGCGACGGCGACTACCAGGTGACGACGGCGGAAACTTCAGAAAACGGCGGGACGGAATGATGGACGCAAGAGAAGTGGACGAAGTACTACTGAAGGTGTTAGACTCCTCTCTTTCTCAAATCAAATGGCGTCTCAAATTTCCAGCCAAGCGTCGCCTCCAAATAGATCTCAATAGTAAACTTGACCGACGACAATTAATTGGTCCGGAAGTACCTTACTTTACAATCGAAGGGCATGATCTTGGGAAACATATTGATGGTAGCAGTAAACCTCCTCAATTTCTTCCAAGAAGTGTATCCTGA MLKPRRRRLPGDDGGNFRKRRDGMMDAREVDEVLLKVLDSSLSQIKWRLKFPAKRRLQIDLNSKLDRRQLIGPEVPYFTIEGHDLGKHIDGSSKPPQFLPRSVS Homology
BLAST of Spg032953 vs. NCBI nr
Match: XP_022935555.1 (uncharacterized protein LOC111442366 [Cucurbita moschata]) HSP 1 Score: 64.7 bits (156), Expect = 5.4e-07 Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0
BLAST of Spg032953 vs. NCBI nr
Match: XP_023520598.1 (uncharacterized protein LOC111784014 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 64.7 bits (156), Expect = 5.4e-07 Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0
BLAST of Spg032953 vs. NCBI nr
Match: KAG6596954.1 (hypothetical protein SDJN03_10134, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 64.7 bits (156), Expect = 5.4e-07 Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0
BLAST of Spg032953 vs. NCBI nr
Match: XP_023520599.1 (uncharacterized protein LOC111784014 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 64.7 bits (156), Expect = 5.4e-07 Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0
BLAST of Spg032953 vs. NCBI nr
Match: XP_023521949.1 (uncharacterized protein LOC111785797 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 64.7 bits (156), Expect = 5.4e-07 Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0
BLAST of Spg032953 vs. ExPASy TrEMBL
Match: A0A6J1FAY6 (uncharacterized protein LOC111442366 OS=Cucurbita moschata OX=3662 GN=LOC111442366 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.6e-07 Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0
BLAST of Spg032953 vs. ExPASy TrEMBL
Match: A0A6J1I8D4 (uncharacterized protein LOC111471896 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471896 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 7.6e-07 Identity = 32/38 (84.21%), Postives = 36/38 (94.74%), Query Frame = 0
BLAST of Spg032953 vs. ExPASy TrEMBL
Match: A0A6J1IB39 (uncharacterized protein LOC111471896 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471896 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 7.6e-07 Identity = 32/38 (84.21%), Postives = 36/38 (94.74%), Query Frame = 0
BLAST of Spg032953 vs. ExPASy TrEMBL
Match: A0A6J1DR28 (uncharacterized protein LOC111023475 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111023475 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.7e-06 Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of Spg032953 vs. ExPASy TrEMBL
Match: A0A6J1DQS9 (uncharacterized protein LOC111023475 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023475 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.7e-06 Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0
BLAST of Spg032953 vs. TAIR 10
Match: AT3G59490.1 (unknown protein; Has 30 Blast hits to 30 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 40.8 bits (94), Expect = 7.8e-04 Identity = 20/30 (66.67%), Postives = 24/30 (80.00%), Query Frame = 0
BLAST of Spg032953 vs. TAIR 10
Match: AT3G59490.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 40.8 bits (94), Expect = 7.8e-04 Identity = 20/30 (66.67%), Postives = 24/30 (80.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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