Spg032945 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg032945
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA-(apurinic or apyrimidinic site) endonuclease
Location	scaffold11: 15786527 .. 15788778 (+)
RNA-Seq Expression	Spg032945
Synteny	Spg032945

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAGCAAAAATAGGATTTCCAAGTAGCGAGGACAGGGACCAAAGTTCCAGAATGTGTGGGGTAATGCAGAGCATAACGGTCTGGGTCTGTCTTCTTCCCCTCCGCTCGTCTTTGCCGCTTCATTCCTCTGCTTCTGTTTCTTCATACATTACTTTTCTTCTCTCAAAATTTTAACGTAGCGCATTTCTCCCTCTACATACTGTTTTCGCTCTCTTCTTTGTCCATGAAGTCAGTATTCCAATTGGGGTTTAGGAGTTTCCTTAATCCCTCCAGGTTTGCCCTTACACCTAAATGCTTTTCTCTTTTTTACTTTCTTGCATCTTTCTTTGCTGATAAGTTAAGGAACAGTGACTTCAAAAGTTTCAAATTTCTTCAATTTAGATTGGAGGGATTTTATGTAACCCCTCATTCTGGAAATGGGACGTTTTGTCCCGCCTGATGGCGCCTTTTGAATGAAAGTTTGGCTCGTTTCTTATTTGAAAAAGAAGTTCCTGATTTCTTAGAAAGAGTGAGCCCACTCTCTCTATCCAACACTGACAGACCTCGCTCGTTTCCTTTGTTCCCAACATGAAGATGGTTTTATTATTAGTACTAGTAGAAGTAGTTGAATGGACTCTTTGTTCAGCTGAATTAACCCGGGCTCTCCGTAGCCTTGCAGTGAATCAGGGTAGGTTGAGAGTCGCAACATTGACACCTTTGCAAACTAATGCAATGGCGTCAAATCGATCCTCTGTAAGTATATCCACACAGAATTCAAAAACCAGTTGGACAAGGAAAGATAGAAATCCGGAAGCCAATTCCAATGCGATAGTTACTGAGGTTGTGGGATGCTTTTTGTTTGAAGTATATTTCACTCACCTTCTATGCCTCTCTTCTTTATTTTGATTTACGTGTTTGACATATAGGAAAATGAAAGTAAAGTGGACATTCAAAGTTTTAAGGATGACCCGTCGAGAATTGAGGCTATGACAGTCCAAGAACTGAGAATGACGCTAAGGTAATGAGAGCTTTATCTTTGAAGTAACATGTTTTGATGTATCCTCCCATGGAGAATTCTTCATTAGATTTTCAATTTGAATATTGAGCTTGGAGTTATATTTGCTGCAGTGTTAGAACAATCGCATCCAGTTCCCAATTTATATCAACCAGCTTTCTTATTTATCATTGGTGTTTACGTTTTGCAGGAGCGTAGGTATTCTGGCCAAAGGGCGTAAGCATGAACTTGTAACTGCATTGCAATGCTTTGTGGAGAATAAAACAGTTGGTATACATTATTTATCTTCAAAGACTGTAATTTCGTTCTTCCAACTTTGTAGTGACTACTTAATGTGACTAGAGTAGACACCATCCAAGATGGAGAAAATATCCTCGATTTTAGTGCTGGCAGTGATCAATATAGTTAGTATTGAAATCGAAATCCATATGAAAGTAATGTGCATTTGTAGTCATAGTTCTCAAGTTCCAGATCAAGTGATCGACGATCCTCCATTTCTTTTCAAGTGTATGATAAATGAGAAGGCTGAGCATATATCTAATGTAGGTGATGTTATTGATGCAGTAGAAGATTATAAAGCAGAACAGACAGAGAGAAATTCAAATGTATCACCTTCTGAGGGTGAAACGGTGAAAGATAAAATGAAAATCTTAATACCAAAGAAGAGGCAGTCAACTAAATCTGATGAAGTTTCAAGTGGTGCTACAAGTAATGCTATCTATCCTTTGAACACCTCTATCTTTCTTTAGTATTGTTTTTTCCCTTCTAAACCTCAAATACACTGCACCTAAGTACTCTCCTTATTTACTGGTACACGGACTAACAAATTTTCTTACATTAATGATATCTTTGTAGGTAGCAACCCATCTAGAACAAAGAGAAAAGTATCCTTGGAATCTACAAAAGTATCCTCAGAAGTTGATTCCAGCATTGTAAAGCATAAGGATGGAGTAGAGATGATGCAAAATGAACCATGGAGTGTTCTTGCTCATAAGAAGCCTAAAAAAGGTTGGATTCCGTACAACCCTAGAACCATGAGGCCTACACCTCTTTCCAAGGATACAAAATCTGTGAAAATTTTATCTTGGAATGTCAATGGGTTAAGAGCATTACTTAAGGGATTTTCAGCAGTGGAACTAGCTGAAAGGGAAGATTTCGACATATTGTGCTTACAGGAGACCAAATTGCAGGCAAGTAGAATAATTCTTATTTCATTTCTACAAAGTTCTATTATACATACTGGAGAAGTATCTTAA

mRNA sequence

ATGAAGATGGTTTTATTATTAGTACTAGTAGAAGTAGTTGAATGGACTCTTTGTTCAGCTGAATTAACCCGGGCTCTCCGTAGCCTTGCAGTGAATCAGGGTAGGTTGAGAGTCGCAACATTGACACCTTTGCAAACTAATGCAATGGCGTCAAATCGATCCTCTGTAAGTATATCCACACAGAATTCAAAAACCAGTTGGACAAGGAAAGATAGAAATCCGGAAGCCAATTCCAATGCGATAGTTACTGAGGAAAATGAAAGTAAAGTGGACATTCAAAGTTTTAAGGATGACCCGTCGAGAATTGAGGCTATGACAGTCCAAGAACTGAGAATGACGCTAAGGAGCGTAGGTATTCTGGCCAAAGGGCGTAAGCATGAACTTGTAACTGCATTGCAATGCTTTGTGGAGAATAAAACAGTTGGTATACATTATTTATCTTCAAAGACTGTAATTTCGTTCTTCCAACTTTGTAGTGACTACTTAATTCATAGTTCTCAAGTTCCAGATCAAGTGATCGACGATCCTCCATTTCTTTTCAAGTGTATGATAAATGAGAAGGCTGAGCATATATCTAATGTAGGTGATGTTATTGATGCAGTAGAAGATTATAAAGCAGAACAGACAGAGAGAAATTCAAATGTATCACCTTCTGAGGGTGAAACGGTGAAAGATAAAATGAAAATCTTAATACCAAAGAAGAGGCAGTCAACTAAATCTGATGAAGTTTCAAGTGGTGCTACAAGTAGCAACCCATCTAGAACAAAGAGAAAAGTATCCTTGGAATCTACAAAAGTATCCTCAGAAGTTGATTCCAGCATTGTAAAGCATAAGGATGGAGTAGAGATGATGCAAAATGAACCATGGAGTGTTCTTGCTCATAAGAAGCCTAAAAAAGGTTGGATTCCGTACAACCCTAGAACCATGAGGCCTACACCTCTTTCCAAGGATACAAAATCTGTGAAAATTTTATCTTGGAATGTCAATGGGTTAAGAGCATTACTTAAGGGATTTTCAGCAGTGGAACTAGCTGAAAGGGAAGATTTCGACATATTGTGCTTACAGGAGACCAAATTGCAGGCAAGTAGAATAATTCTTATTTCATTTCTACAAAGTTCTATTATACATACTGGAGAAGTATCTTAA

Coding sequence (CDS)

ATGAAGATGGTTTTATTATTAGTACTAGTAGAAGTAGTTGAATGGACTCTTTGTTCAGCTGAATTAACCCGGGCTCTCCGTAGCCTTGCAGTGAATCAGGGTAGGTTGAGAGTCGCAACATTGACACCTTTGCAAACTAATGCAATGGCGTCAAATCGATCCTCTGTAAGTATATCCACACAGAATTCAAAAACCAGTTGGACAAGGAAAGATAGAAATCCGGAAGCCAATTCCAATGCGATAGTTACTGAGGAAAATGAAAGTAAAGTGGACATTCAAAGTTTTAAGGATGACCCGTCGAGAATTGAGGCTATGACAGTCCAAGAACTGAGAATGACGCTAAGGAGCGTAGGTATTCTGGCCAAAGGGCGTAAGCATGAACTTGTAACTGCATTGCAATGCTTTGTGGAGAATAAAACAGTTGGTATACATTATTTATCTTCAAAGACTGTAATTTCGTTCTTCCAACTTTGTAGTGACTACTTAATTCATAGTTCTCAAGTTCCAGATCAAGTGATCGACGATCCTCCATTTCTTTTCAAGTGTATGATAAATGAGAAGGCTGAGCATATATCTAATGTAGGTGATGTTATTGATGCAGTAGAAGATTATAAAGCAGAACAGACAGAGAGAAATTCAAATGTATCACCTTCTGAGGGTGAAACGGTGAAAGATAAAATGAAAATCTTAATACCAAAGAAGAGGCAGTCAACTAAATCTGATGAAGTTTCAAGTGGTGCTACAAGTAGCAACCCATCTAGAACAAAGAGAAAAGTATCCTTGGAATCTACAAAAGTATCCTCAGAAGTTGATTCCAGCATTGTAAAGCATAAGGATGGAGTAGAGATGATGCAAAATGAACCATGGAGTGTTCTTGCTCATAAGAAGCCTAAAAAAGGTTGGATTCCGTACAACCCTAGAACCATGAGGCCTACACCTCTTTCCAAGGATACAAAATCTGTGAAAATTTTATCTTGGAATGTCAATGGGTTAAGAGCATTACTTAAGGGATTTTCAGCAGTGGAACTAGCTGAAAGGGAAGATTTCGACATATTGTGCTTACAGGAGACCAAATTGCAGGCAAGTAGAATAATTCTTATTTCATTTCTACAAAGTTCTATTATACATACTGGAGAAGTATCTTAA

Protein sequence

MKMVLLLVLVEVVEWTLCSAELTRALRSLAVNQGRLRVATLTPLQTNAMASNRSSVSISTQNSKTSWTRKDRNPEANSNAIVTEENESKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQCFVENKTVGIHYLSSKTVISFFQLCSDYLIHSSQVPDQVIDDPPFLFKCMINEKAEHISNVGDVIDAVEDYKAEQTERNSNVSPSEGETVKDKMKILIPKKRQSTKSDEVSSGATSSNPSRTKRKVSLESTKVSSEVDSSIVKHKDGVEMMQNEPWSVLAHKKPKKGWIPYNPRTMRPTPLSKDTKSVKILSWNVNGLRALLKGFSAVELAEREDFDILCLQETKLQASRIILISFLQSSIIHTGEVS

Homology

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BLAST of Spg032945 vs. NCBI nr
Match: KAG6596952.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 359.8 bits (922), Expect = 3.0e-95
Identity = 213/340 (62.65%), Postives = 236/340 (69.41%), Query Frame = 0


Query: 28  SLAVNQGRLRVATLTPLQTNAMASNRSSVSISTQNSKTSWTRKDRNPEANSNAIVTEENE 87
           SLAVNQ R R+ATL PLQT AMA NR S+++ST N+ T  TRKD + E NS+ I+ EEN+
Sbjct: 17  SLAVNQSRFRIATLIPLQTVAMALNRLSLNLSTHNTTTGGTRKDTSLETNSSEIIVEEND 76

Query: 88  SKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQCFVENKTVGIHYLS 147
           SKVDIQSFKDDPS+IEAMTVQELRMTLRSVGILAKGRKH+LV ALQ FVEN+T       
Sbjct: 77  SKVDIQSFKDDPSKIEAMTVQELRMTLRSVGILAKGRKHDLVIALQRFVENQT------- 136

Query: 148 SKTVISFFQLCSDYLIHSSQVPDQVIDDPPFLFKCMINEKAEHISNVGDVIDAVEDYKAE 207
                                                         VG VID VEDY+A+
Sbjct: 137 ----------------------------------------------VGSVIDEVEDYRAQ 196

Query: 208 QTERNSNVSPSEGETVKDKMKILIPKKRQSTKSDEVSSGATSSNPSRTKRKVSLESTKVS 267
           QTER+SNVSPSEGET   + K L PKKRQS KS          NPSRTK+       KVS
Sbjct: 197 QTERDSNVSPSEGETEAAETKFLTPKKRQSAKS--------GCNPSRTKK-------KVS 256

Query: 268 SEVDSSIVKHKDGVEMMQNEPWSVLAHKKPKKGWIPYNPRTMRPTPLSKDTKSVKILSWN 327
           SEVDSSIVKH+ GVE+MQ EPW+VLAHKKP+KGWI YNPRTMRP PLSKDTKSVKILSWN
Sbjct: 257 SEVDSSIVKHEHGVELMQKEPWTVLAHKKPQKGWIAYNPRTMRPKPLSKDTKSVKILSWN 288

Query: 328 VNGLRALLKGFSAVELAEREDFDILCLQETKLQASRIILI 368
           VNGLRALLKGFSAVELAEREDFDILCLQETKLQ   ++ I
Sbjct: 317 VNGLRALLKGFSAVELAEREDFDILCLQETKLQEKDVLEI 288

[Close]

BLAST of Spg032945 vs. NCBI nr
Match: XP_022973325.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucurbita maxima] >XP_022973327.1 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 359.4 bits (921), Expect = 3.9e-95
Identity = 213/340 (62.65%), Postives = 236/340 (69.41%), Query Frame = 0


Query: 28  SLAVNQGRLRVATLTPLQTNAMASNRSSVSISTQNSKTSWTRKDRNPEANSNAIVTEENE 87
           SLAVNQ R R+ATL PLQT AMA NR SV++ST N+ T  TRKD + E NS+ I+ EEN+
Sbjct: 17  SLAVNQSRFRIATLLPLQTVAMALNRLSVNLSTHNTTTGGTRKDTSLETNSSQIIVEEND 76

Query: 88  SKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQCFVENKTVGIHYLS 147
           SKVDIQSFKDDPS+IEAMTVQELRMTLRSVGILAKGRKH+LV ALQ FVEN+T       
Sbjct: 77  SKVDIQSFKDDPSKIEAMTVQELRMTLRSVGILAKGRKHDLVIALQRFVENQT------- 136

Query: 148 SKTVISFFQLCSDYLIHSSQVPDQVIDDPPFLFKCMINEKAEHISNVGDVIDAVEDYKAE 207
                                                         VG VIDAVEDY+++
Sbjct: 137 ----------------------------------------------VGSVIDAVEDYRSQ 196

Query: 208 QTERNSNVSPSEGETVKDKMKILIPKKRQSTKSDEVSSGATSSNPSRTKRKVSLESTKVS 267
           QTER+SNVSPSEGET   + K L PKKRQS KS          NPSRTK+       KV 
Sbjct: 197 QTERDSNVSPSEGETEAAETKFLTPKKRQSAKS--------GCNPSRTKK-------KVL 256

Query: 268 SEVDSSIVKHKDGVEMMQNEPWSVLAHKKPKKGWIPYNPRTMRPTPLSKDTKSVKILSWN 327
           SEVDSSIVKH+ GVE+MQ EPW+VLAHKKP+KGWI YNPRTMRP PLSKDTKSVKILSWN
Sbjct: 257 SEVDSSIVKHEHGVELMQKEPWTVLAHKKPQKGWIAYNPRTMRPKPLSKDTKSVKILSWN 288

Query: 328 VNGLRALLKGFSAVELAEREDFDILCLQETKLQASRIILI 368
           VNGLRALLKGFSAVELAEREDFDILCLQETKLQ   ++ I
Sbjct: 317 VNGLRALLKGFSAVELAEREDFDILCLQETKLQEKDVLEI 288

[Close]

BLAST of Spg032945 vs. NCBI nr
Match: XP_022949935.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 358.2 bits (918), Expect = 8.7e-95
Identity = 213/340 (62.65%), Postives = 235/340 (69.12%), Query Frame = 0


Query: 28  SLAVNQGRLRVATLTPLQTNAMASNRSSVSISTQNSKTSWTRKDRNPEANSNAIVTEENE 87
           SLAVNQ R R+ATL PLQT AMA NR S+++ST N+ T  TRKD + E NS+ I+ EEN+
Sbjct: 17  SLAVNQSRFRIATLIPLQTVAMALNRLSLNLSTHNTTTGGTRKDTSLETNSSEIIVEEND 76

Query: 88  SKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQCFVENKTVGIHYLS 147
           SKVDIQSFKDDPS+IEAMTV ELRMTLRSVGILAKGRKH+LV ALQ FVEN+TVG     
Sbjct: 77  SKVDIQSFKDDPSKIEAMTVHELRMTLRSVGILAKGRKHDLVIALQRFVENQTVGC---- 136

Query: 148 SKTVISFFQLCSDYLIHSSQVPDQVIDDPPFLFKCMINEKAEHISNVGDVIDAVEDYKAE 207
                                                            VIDAVEDY+A+
Sbjct: 137 -------------------------------------------------VIDAVEDYRAQ 196

Query: 208 QTERNSNVSPSEGETVKDKMKILIPKKRQSTKSDEVSSGATSSNPSRTKRKVSLESTKVS 267
           QTER+SNVSPSEGET   + K L PKKRQS KS          NPSRTK+       KVS
Sbjct: 197 QTERDSNVSPSEGETEAAETKFLTPKKRQSAKS--------GCNPSRTKK-------KVS 256

Query: 268 SEVDSSIVKHKDGVEMMQNEPWSVLAHKKPKKGWIPYNPRTMRPTPLSKDTKSVKILSWN 327
           SEVDSSIVKH+ GVE+MQ EPW+VLAHKKP KGWI YNPRTMRP PLSKDTKSVKILSWN
Sbjct: 257 SEVDSSIVKHEHGVELMQKEPWTVLAHKKPHKGWIAYNPRTMRPKPLSKDTKSVKILSWN 288

Query: 328 VNGLRALLKGFSAVELAEREDFDILCLQETKLQASRIILI 368
           VNGLRALLKGFSAVELAEREDFDILCLQETKLQ   ++ I
Sbjct: 317 VNGLRALLKGFSAVELAEREDFDILCLQETKLQEKDVLEI 288

[Close]

BLAST of Spg032945 vs. NCBI nr
Match: XP_023520615.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.5 bits (916), Expect = 1.5e-94
Identity = 212/340 (62.35%), Postives = 235/340 (69.12%), Query Frame = 0


Query: 28  SLAVNQGRLRVATLTPLQTNAMASNRSSVSISTQNSKTSWTRKDRNPEANSNAIVTEENE 87
           SLAVNQ R R+ATL PLQ  AMA NR S+++ST N+ T  TRKD + E NS+ I+ EEN+
Sbjct: 17  SLAVNQSRFRIATLIPLQAVAMALNRPSLNLSTHNTTTGGTRKDTSLETNSSEIIVEEND 76

Query: 88  SKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQCFVENKTVGIHYLS 147
           SKV IQSFKDDPS+IEAMTVQELRMTLRSVGILAKGRKH+LV ALQ FVEN+T       
Sbjct: 77  SKVHIQSFKDDPSKIEAMTVQELRMTLRSVGILAKGRKHDLVIALQRFVENQT------- 136

Query: 148 SKTVISFFQLCSDYLIHSSQVPDQVIDDPPFLFKCMINEKAEHISNVGDVIDAVEDYKAE 207
                                                         VG VIDAVEDY+A+
Sbjct: 137 ----------------------------------------------VGSVIDAVEDYRAQ 196

Query: 208 QTERNSNVSPSEGETVKDKMKILIPKKRQSTKSDEVSSGATSSNPSRTKRKVSLESTKVS 267
           QTER+SNVSPSEGET   + K L PKKRQS KS          NPSRTK+       KVS
Sbjct: 197 QTERDSNVSPSEGETEAAETKFLTPKKRQSAKS--------GCNPSRTKK-------KVS 256

Query: 268 SEVDSSIVKHKDGVEMMQNEPWSVLAHKKPKKGWIPYNPRTMRPTPLSKDTKSVKILSWN 327
           SEVDSSIVKH+ GVE+MQ EPW+VLAHKKP+KGWI YNPRTMRP PLSKDTKSVKILSWN
Sbjct: 257 SEVDSSIVKHEHGVELMQKEPWTVLAHKKPQKGWIAYNPRTMRPKPLSKDTKSVKILSWN 288

Query: 328 VNGLRALLKGFSAVELAEREDFDILCLQETKLQASRIILI 368
           VNGLRALLKGFSAVELAEREDFDILCLQETKLQ   ++ I
Sbjct: 317 VNGLRALLKGFSAVELAEREDFDILCLQETKLQEKDVLEI 288

[Close]

BLAST of Spg032945 vs. NCBI nr
Match: XP_038906365.1 (DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 355.1 bits (910), Expect = 7.3e-94
Identity = 212/339 (62.54%), Postives = 237/339 (69.91%), Query Frame = 0


Query: 28  SLAVNQGRLRVATLTP-LQTNAMASNRSSVSISTQNSKTSWTRKDRNPEANSNAIVTEEN 87
           SLAVNQ RLRVATL P +Q N MASN+SS+++STQNS+   TR+D           + EN
Sbjct: 17  SLAVNQSRLRVATLIPNMQRNVMASNQSSITLSTQNSEPGGTRRD----------TSLEN 76

Query: 88  ESKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQCFVENKTVGIHYL 147
           + KVDIQSFKDDPSRIEAMTVQELRMTLRSVG+LAKGRKHELVTALQCFVENKTV     
Sbjct: 77  DCKVDIQSFKDDPSRIEAMTVQELRMTLRSVGLLAKGRKHELVTALQCFVENKTV----- 136

Query: 148 SSKTVISFFQLCSDYLIHSSQVPDQVIDDPPFLFKCMINEKAEHISNVGDVIDAVEDYKA 207
                                                                 VED++A
Sbjct: 137 ------------------------------------------------------VEDHRA 196

Query: 208 EQTERNSNVSPSEGETVKDKMKILIPKKRQSTKSDEVSSGATSSNPSRTKRKVSLESTKV 267
           +QTER+SNVSP EGE VK + KIL PKKRQS +S+EVSSG TSSNPSR KR       K 
Sbjct: 197 QQTERSSNVSPLEGEIVKAETKILTPKKRQSAESNEVSSGPTSSNPSRRKR-------KG 256

Query: 268 SSEVDSSIVKHKDGVEMMQNEPWSVLAHKKPKKGWIPYNPRTMRPTPLSKDTKSVKILSW 327
           SSEV S+IVK +DGVE+MQNEPW++LAHKKP+KGWIPYNP+ MRPTPLSKDTKSVKILSW
Sbjct: 257 SSEVVSNIVKQEDGVEVMQNEPWTILAHKKPQKGWIPYNPKIMRPTPLSKDTKSVKILSW 279

Query: 328 NVNGLRALLKGFSAVELAEREDFDILCLQETKLQASRII 366
           NVNGLRALLKGFSAVELAEREDFDILCLQETKLQ   I+
Sbjct: 317 NVNGLRALLKGFSAVELAEREDFDILCLQETKLQEKDIL 279

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BLAST of Spg032945 vs. ExPASy Swiss-Prot
Match: P45951 (DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ARP PE=1 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 3.0e-34
Identity = 117/341 (34.31%), Postives = 172/341 (50.44%), Query Frame = 0


Query: 26  LRSLAVNQGRLRVATLTPLQTNAMASNRSSVSISTQNSKTSWTRKDRNPEANSNAIVTEE 85
           LRSL V    + V   T      + SN ++ SI+    K     K      + N      
Sbjct: 24  LRSLRVGSSFVGVGVGTRSFNKRLMSNATAFSINNSKRK---ELKIPGAAIDQNCHQMGS 83

Query: 86  NESKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQCFVENKTVGIHY 145
           +  + ++ + +DD   IEAMTVQELR TLR +G+  KGRK EL++ L+  +++       
Sbjct: 84  DTDRDEMGTLQDDRKEIEAMTVQELRSTLRKLGVPVKGRKQELISTLRLHMDSNLPDQKE 143

Query: 146 LSSKTVISFFQLCSDYLIHSSQVPDQVIDDPPFLFKCMINEKAEHISNVGDVIDAVEDYK 205
            SS T        SD +    ++ ++   + P   +C  +E  +        I+  E   
Sbjct: 144 TSSST-------RSDSVTIKRKISNR---EEPTEDECTNSEAYD--------IEHGEKRV 203

Query: 206 AEQTERNSNVSPSEGETVKDKMKILIPKKRQSTKSDEVSSGATSSNPSRTKRKVSLESTK 265
            + TE+N     S  + +  + K L+   +Q  +S E +S   SS   +T+  +S  S  
Sbjct: 204 KQSTEKNLKAKVS-AKAIAKEQKSLMRTGKQQIQSKEETSSTISSELLKTEEIISSPS-- 263

Query: 266 VSSEVDSSIVKHKDGVEMMQNEPWSVLAHKKPKKGWIPYNPRTMRPTPLSKDTKSVKILS 325
                              Q+EPW+VLAHKKP+K W  YNP+TMRP PL + TK VK+++
Sbjct: 264 -------------------QSEPWTVLAHKKPQKDWKAYNPKTMRPPPLPEGTKCVKVMT 321

Query: 326 WNVNGLRALLK--GFSAVELAEREDFDILCLQETKLQASRI 365
           WNVNGLR LLK   FSA++LA+RE+FDILCLQETKLQ   +
Sbjct: 324 WNVNGLRGLLKFESFSALQLAQRENFDILCLQETKLQVKDV 321

[Close]

BLAST of Spg032945 vs. ExPASy Swiss-Prot
Match: P37454 (Exodeoxyribonuclease OS=Bacillus subtilis (strain 168) OX=224308 GN=exoA PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.0e-05
Identity = 22/46 (47.83%), Postives = 34/46 (73.91%), Query Frame = 0


Query: 321 VKILSWNVNGLRALLKGFSAVELAEREDFDILCLQETKLQASRIIL 367
           +K++SWNVNGLRA+++    +   + ED DI+CLQETK+Q  ++ L
Sbjct: 1   MKLISWNVNGLRAVMRKMDFLSYLKEEDADIICLQETKIQDGQVDL 46

[Close]

BLAST of Spg032945 vs. ExPASy Swiss-Prot
Match: A0MTA1 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Danio rerio OX=7955 GN=apex1 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 3.0e-05
Identity = 37/88 (42.05%), Postives = 51/88 (57.95%), Query Frame = 0


Query: 276 KHKDGVEMMQNEPWSVLAHKKPKKGWIPYNPRTMRPTP---LSKDTK--SVKILSWNVNG 335
           K+++GV+   +      A KK KKG  P  P      P    SKD +  ++KI SWNV+G
Sbjct: 7   KNEEGVDGEADN--GTAAAKKEKKGKEPEAPILYEDPPEKLTSKDGRAANMKITSWNVDG 66

Query: 336 LRALLKGFSAVELAEREDFDILCLQETK 359
           LRA +K  + ++   +ED DILCLQETK
Sbjct: 67  LRAWVKK-NGLDWVRKEDPDILCLQETK 91

[Close]

BLAST of Spg032945 vs. ExPASy Swiss-Prot
Match: P51173 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Dictyostelium discoideum OX=44689 GN=apeA PE=2 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 3.3e-04
Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 317 DTKSVKILSWNVNGLRALL-KGFSAVELAEREDFDILCLQETKLQASRI 365
           +   +KI+SWNV G +++L KGF+  E  E+E+ D+LCLQETK+  S I
Sbjct: 101 EENQMKIISWNVAGFKSVLSKGFT--EYVEKENPDVLCLQETKINPSNI 147

[Close]

BLAST of Spg032945 vs. ExPASy TrEMBL
Match: A0A6J1IB28 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucurbita maxima OX=3661 GN=LOC111471891 PE=3 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.9e-95
Identity = 213/340 (62.65%), Postives = 236/340 (69.41%), Query Frame = 0


Query: 28  SLAVNQGRLRVATLTPLQTNAMASNRSSVSISTQNSKTSWTRKDRNPEANSNAIVTEENE 87
           SLAVNQ R R+ATL PLQT AMA NR SV++ST N+ T  TRKD + E NS+ I+ EEN+
Sbjct: 17  SLAVNQSRFRIATLLPLQTVAMALNRLSVNLSTHNTTTGGTRKDTSLETNSSQIIVEEND 76

Query: 88  SKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQCFVENKTVGIHYLS 147
           SKVDIQSFKDDPS+IEAMTVQELRMTLRSVGILAKGRKH+LV ALQ FVEN+T       
Sbjct: 77  SKVDIQSFKDDPSKIEAMTVQELRMTLRSVGILAKGRKHDLVIALQRFVENQT------- 136

Query: 148 SKTVISFFQLCSDYLIHSSQVPDQVIDDPPFLFKCMINEKAEHISNVGDVIDAVEDYKAE 207
                                                         VG VIDAVEDY+++
Sbjct: 137 ----------------------------------------------VGSVIDAVEDYRSQ 196

Query: 208 QTERNSNVSPSEGETVKDKMKILIPKKRQSTKSDEVSSGATSSNPSRTKRKVSLESTKVS 267
           QTER+SNVSPSEGET   + K L PKKRQS KS          NPSRTK+       KV 
Sbjct: 197 QTERDSNVSPSEGETEAAETKFLTPKKRQSAKS--------GCNPSRTKK-------KVL 256

Query: 268 SEVDSSIVKHKDGVEMMQNEPWSVLAHKKPKKGWIPYNPRTMRPTPLSKDTKSVKILSWN 327
           SEVDSSIVKH+ GVE+MQ EPW+VLAHKKP+KGWI YNPRTMRP PLSKDTKSVKILSWN
Sbjct: 257 SEVDSSIVKHEHGVELMQKEPWTVLAHKKPQKGWIAYNPRTMRPKPLSKDTKSVKILSWN 288

Query: 328 VNGLRALLKGFSAVELAEREDFDILCLQETKLQASRIILI 368
           VNGLRALLKGFSAVELAEREDFDILCLQETKLQ   ++ I
Sbjct: 317 VNGLRALLKGFSAVELAEREDFDILCLQETKLQEKDVLEI 288

[Close]

BLAST of Spg032945 vs. ExPASy TrEMBL
Match: A0A6J1GE66 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucurbita moschata OX=3662 GN=LOC111453177 PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 4.2e-95
Identity = 213/340 (62.65%), Postives = 235/340 (69.12%), Query Frame = 0


Query: 28  SLAVNQGRLRVATLTPLQTNAMASNRSSVSISTQNSKTSWTRKDRNPEANSNAIVTEENE 87
           SLAVNQ R R+ATL PLQT AMA NR S+++ST N+ T  TRKD + E NS+ I+ EEN+
Sbjct: 17  SLAVNQSRFRIATLIPLQTVAMALNRLSLNLSTHNTTTGGTRKDTSLETNSSEIIVEEND 76

Query: 88  SKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQCFVENKTVGIHYLS 147
           SKVDIQSFKDDPS+IEAMTV ELRMTLRSVGILAKGRKH+LV ALQ FVEN+TVG     
Sbjct: 77  SKVDIQSFKDDPSKIEAMTVHELRMTLRSVGILAKGRKHDLVIALQRFVENQTVGC---- 136

Query: 148 SKTVISFFQLCSDYLIHSSQVPDQVIDDPPFLFKCMINEKAEHISNVGDVIDAVEDYKAE 207
                                                            VIDAVEDY+A+
Sbjct: 137 -------------------------------------------------VIDAVEDYRAQ 196

Query: 208 QTERNSNVSPSEGETVKDKMKILIPKKRQSTKSDEVSSGATSSNPSRTKRKVSLESTKVS 267
           QTER+SNVSPSEGET   + K L PKKRQS KS          NPSRTK+       KVS
Sbjct: 197 QTERDSNVSPSEGETEAAETKFLTPKKRQSAKS--------GCNPSRTKK-------KVS 256

Query: 268 SEVDSSIVKHKDGVEMMQNEPWSVLAHKKPKKGWIPYNPRTMRPTPLSKDTKSVKILSWN 327
           SEVDSSIVKH+ GVE+MQ EPW+VLAHKKP KGWI YNPRTMRP PLSKDTKSVKILSWN
Sbjct: 257 SEVDSSIVKHEHGVELMQKEPWTVLAHKKPHKGWIAYNPRTMRPKPLSKDTKSVKILSWN 288

Query: 328 VNGLRALLKGFSAVELAEREDFDILCLQETKLQASRIILI 368
           VNGLRALLKGFSAVELAEREDFDILCLQETKLQ   ++ I
Sbjct: 317 VNGLRALLKGFSAVELAEREDFDILCLQETKLQEKDVLEI 288

[Close]

BLAST of Spg032945 vs. ExPASy TrEMBL
Match: A0A6J1DMA4 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Momordica charantia OX=3673 GN=LOC111021351 PE=3 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 7.4e-92
Identity = 218/342 (63.74%), Postives = 238/342 (69.59%), Query Frame = 0


Query: 28  SLAVNQGRLRVATLTPLQTNAMASNRSSVSISTQNSKTSWTRKDRNPEANSNAIVTEENE 87
           S+AVN  R RVATL   +TN+MASNRSSVS+STQN K    RKDR    NS+ IV EEN+
Sbjct: 21  SVAVNLCRWRVATLVTFRTNSMASNRSSVSLSTQNGK----RKDR----NSDEIVVEEND 80

Query: 88  SKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQCFVENKTVGIHYLS 147
           SKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQ FVE KT       
Sbjct: 81  SKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQGFVEKKT------- 140

Query: 148 SKTVISFFQLCSDYLIHSSQVPDQVIDDPPFLFKCMINEKAEHISNVGDVIDAVEDYKAE 207
                                                         +G VIDAVED+  +
Sbjct: 141 ----------------------------------------------IGGVIDAVEDFGVQ 200

Query: 208 QTERNSNVSPSEGETVKDKMKILIPKKRQSTKSDEVSSGATSSNPSRTKRKVSLESTKVS 267
           QT+RNSNVSPSEGETVK + K L  K  +S KSDEVSS AT+S PSRTKR       KVS
Sbjct: 201 QTKRNSNVSPSEGETVKVETKTLTSK--ESVKSDEVSSCATNSEPSRTKR-------KVS 260

Query: 268 SEVDSSIVKHKDGVEMMQNEPWSVLAHKKPKKGWIPYNPRTMRPTPLSKDTKSVKILSWN 327
           SEV S  VKH DGVE+MQNEPW+VLAHKKP+KGWIPYNPRTMRP+PLSKDTKS+KILSWN
Sbjct: 261 SEVVSRTVKHGDGVEVMQNEPWTVLAHKKPQKGWIPYNPRTMRPSPLSKDTKSLKILSWN 292

Query: 328 VNGLRALLK--GFSAVELAEREDFDILCLQETKLQASRIILI 368
           VNGLRALLK  GFSA+ LAERE FDILCLQETKLQ   I+ I
Sbjct: 321 VNGLRALLKLGGFSALGLAEREAFDILCLQETKLQEKDILEI 292

[Close]

BLAST of Spg032945 vs. ExPASy TrEMBL
Match: A0A6J1DIY8 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Momordica charantia OX=3673 GN=LOC111021351 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 9.7e-92
Identity = 222/354 (62.71%), Postives = 243/354 (68.64%), Query Frame = 0


Query: 28  SLAVNQGRLRVATLTPLQTNAMASNRSSVSISTQNSKTSWTRKDRNPEANSNAIVTEENE 87
           S+AVN  R RVATL   +TN+MASNRSSVS+STQN K    RKDR    NS+ IV EEN+
Sbjct: 21  SVAVNLCRWRVATLVTFRTNSMASNRSSVSLSTQNGK----RKDR----NSDEIVVEEND 80

Query: 88  SKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQCFVENKTVGIHYLS 147
           SKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQ FVE KT       
Sbjct: 81  SKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQGFVEKKT------- 140

Query: 148 SKTVISFFQLCSDYLIHSSQVPDQVIDDPPFLFKCMINEKAEHISNVGDVIDAVEDYKAE 207
                                                         +G VIDAVED+  +
Sbjct: 141 ----------------------------------------------IGGVIDAVEDFGVQ 200

Query: 208 QTERNSNVSPSEGETVKDKMKILIPKKRQSTKSDEVSSGATSSNPSRTKRKVSLESTKVS 267
           QT+RNSNVSPSEGETVK + K L  K  +S KSDEVSS AT+S PSRTKR       KVS
Sbjct: 201 QTKRNSNVSPSEGETVKVETKTLTSK--ESVKSDEVSSCATNSEPSRTKR-------KVS 260

Query: 268 SEVDSSIVKHKDGVEMMQNEPWSVLAHKKPKKGWIPYNPRTMRPTPLSKDTKSVKILSWN 327
           SEV S  VKH DGVE+MQNEPW+VLAHKKP+KGWIPYNPRTMRP+PLSKDTKS+KILSWN
Sbjct: 261 SEVVSRTVKHGDGVEVMQNEPWTVLAHKKPQKGWIPYNPRTMRPSPLSKDTKSLKILSWN 304

Query: 328 VNGLRALLK--GFSAVELAEREDFDILCLQETKLQ-ASRIILISFLQSSIIHTG 379
           VNGLRALLK  GFSA+ LAERE FDILCLQETKLQ ASR   +   Q S +  G
Sbjct: 321 VNGLRALLKLGGFSALGLAEREAFDILCLQETKLQPASRSERVGGRQRSSLGDG 304

[Close]

BLAST of Spg032945 vs. ExPASy TrEMBL
Match: A0A6J1DIZ5 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Momordica charantia OX=3673 GN=LOC111021351 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 9.7e-92
Identity = 222/354 (62.71%), Postives = 243/354 (68.64%), Query Frame = 0


Query: 28  SLAVNQGRLRVATLTPLQTNAMASNRSSVSISTQNSKTSWTRKDRNPEANSNAIVTEENE 87
           S+AVN  R RVATL   +TN+MASNRSSVS+STQN K    RKDR    NS+ IV EEN+
Sbjct: 21  SVAVNLCRWRVATLVTFRTNSMASNRSSVSLSTQNGK----RKDR----NSDEIVVEEND 80

Query: 88  SKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQCFVENKTVGIHYLS 147
           SKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQ FVE KT       
Sbjct: 81  SKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQGFVEKKT------- 140

Query: 148 SKTVISFFQLCSDYLIHSSQVPDQVIDDPPFLFKCMINEKAEHISNVGDVIDAVEDYKAE 207
                                                         +G VIDAVED+  +
Sbjct: 141 ----------------------------------------------IGGVIDAVEDFGVQ 200

Query: 208 QTERNSNVSPSEGETVKDKMKILIPKKRQSTKSDEVSSGATSSNPSRTKRKVSLESTKVS 267
           QT+RNSNVSPSEGETVK + K L  K  +S KSDEVSS AT+S PSRTKR       KVS
Sbjct: 201 QTKRNSNVSPSEGETVKVETKTLTSK--ESVKSDEVSSCATNSEPSRTKR-------KVS 260

Query: 268 SEVDSSIVKHKDGVEMMQNEPWSVLAHKKPKKGWIPYNPRTMRPTPLSKDTKSVKILSWN 327
           SEV S  VKH DGVE+MQNEPW+VLAHKKP+KGWIPYNPRTMRP+PLSKDTKS+KILSWN
Sbjct: 261 SEVVSRTVKHGDGVEVMQNEPWTVLAHKKPQKGWIPYNPRTMRPSPLSKDTKSLKILSWN 304

Query: 328 VNGLRALLK--GFSAVELAEREDFDILCLQETKLQ-ASRIILISFLQSSIIHTG 379
           VNGLRALLK  GFSA+ LAERE FDILCLQETKLQ ASR   +   Q S +  G
Sbjct: 321 VNGLRALLKLGGFSALGLAEREAFDILCLQETKLQPASRSERVGGRQRSSLGDG 304

[Close]

BLAST of Spg032945 vs. TAIR 10
Match: AT2G41460.1 (apurinic endonuclease-redox protein )

HSP 1 Score: 147.5 bits (371), Expect = 2.2e-35
Identity = 117/341 (34.31%), Postives = 172/341 (50.44%), Query Frame = 0


Query: 26  LRSLAVNQGRLRVATLTPLQTNAMASNRSSVSISTQNSKTSWTRKDRNPEANSNAIVTEE 85
           LRSL V    + V   T      + SN ++ SI+    K     K      + N      
Sbjct: 24  LRSLRVGSSFVGVGVGTRSFNKRLMSNATAFSINNSKRK---ELKIPGAAIDQNCHQMGS 83

Query: 86  NESKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQCFVENKTVGIHY 145
           +  + ++ + +DD   IEAMTVQELR TLR +G+  KGRK EL++ L+  +++       
Sbjct: 84  DTDRDEMGTLQDDRKEIEAMTVQELRSTLRKLGVPVKGRKQELISTLRLHMDSNLPDQKE 143

Query: 146 LSSKTVISFFQLCSDYLIHSSQVPDQVIDDPPFLFKCMINEKAEHISNVGDVIDAVEDYK 205
            SS T        SD +    ++ ++   + P   +C  +E  +        I+  E   
Sbjct: 144 TSSST-------RSDSVTIKRKISNR---EEPTEDECTNSEAYD--------IEHGEKRV 203

Query: 206 AEQTERNSNVSPSEGETVKDKMKILIPKKRQSTKSDEVSSGATSSNPSRTKRKVSLESTK 265
            + TE+N     S  + +  + K L+   +Q  +S E +S   SS   +T+  +S  S  
Sbjct: 204 KQSTEKNLKAKVS-AKAIAKEQKSLMRTGKQQIQSKEETSSTISSELLKTEEIISSPS-- 263

Query: 266 VSSEVDSSIVKHKDGVEMMQNEPWSVLAHKKPKKGWIPYNPRTMRPTPLSKDTKSVKILS 325
                              Q+EPW+VLAHKKP+K W  YNP+TMRP PL + TK VK+++
Sbjct: 264 -------------------QSEPWTVLAHKKPQKDWKAYNPKTMRPPPLPEGTKCVKVMT 321

Query: 326 WNVNGLRALLK--GFSAVELAEREDFDILCLQETKLQASRI 365
           WNVNGLR LLK   FSA++LA+RE+FDILCLQETKLQ   +
Sbjct: 324 WNVNGLRGLLKFESFSALQLAQRENFDILCLQETKLQVKDV 321

[Close]

BLAST of Spg032945 vs. TAIR 10
Match: AT2G41460.2 (apurinic endonuclease-redox protein )

HSP 1 Score: 147.5 bits (371), Expect = 2.2e-35
Identity = 117/341 (34.31%), Postives = 172/341 (50.44%), Query Frame = 0


Query: 26  LRSLAVNQGRLRVATLTPLQTNAMASNRSSVSISTQNSKTSWTRKDRNPEANSNAIVTEE 85
           LRSL V    + V   T      + SN ++ SI+    K     K      + N      
Sbjct: 24  LRSLRVGSSFVGVGVGTRSFNKRLMSNATAFSINNSKRK---ELKIPGAAIDQNCHQMGS 83

Query: 86  NESKVDIQSFKDDPSRIEAMTVQELRMTLRSVGILAKGRKHELVTALQCFVENKTVGIHY 145
           +  + ++ + +DD   IEAMTVQELR TLR +G+  KGRK EL++ L+  +++       
Sbjct: 84  DTDRDEMGTLQDDRKEIEAMTVQELRSTLRKLGVPVKGRKQELISTLRLHMDSNLPDQKE 143

Query: 146 LSSKTVISFFQLCSDYLIHSSQVPDQVIDDPPFLFKCMINEKAEHISNVGDVIDAVEDYK 205
            SS T        SD +    ++ ++   + P   +C  +E  +        I+  E   
Sbjct: 144 TSSST-------RSDSVTIKRKISNR---EEPTEDECTNSEAYD--------IEHGEKRV 203

Query: 206 AEQTERNSNVSPSEGETVKDKMKILIPKKRQSTKSDEVSSGATSSNPSRTKRKVSLESTK 265
            + TE+N     S  + +  + K L+   +Q  +S E +S   SS   +T+  +S  S  
Sbjct: 204 KQSTEKNLKAKVS-AKAIAKEQKSLMRTGKQQIQSKEETSSTISSELLKTEEIISSPS-- 263

Query: 266 VSSEVDSSIVKHKDGVEMMQNEPWSVLAHKKPKKGWIPYNPRTMRPTPLSKDTKSVKILS 325
                              Q+EPW+VLAHKKP+K W  YNP+TMRP PL + TK VK+++
Sbjct: 264 -------------------QSEPWTVLAHKKPQKDWKAYNPKTMRPPPLPEGTKCVKVMT 321

Query: 326 WNVNGLRALLK--GFSAVELAEREDFDILCLQETKLQASRI 365
           WNVNGLR LLK   FSA++LA+RE+FDILCLQETKLQ   +
Sbjct: 324 WNVNGLRGLLKFESFSALQLAQRENFDILCLQETKLQVKDV 321

The following BLAST results are available for this feature:

BLAST of Spg032945 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596952.1	3.0e-95	62.65	DNA-(apurinic or apyrimidinic site) lyase, chloroplastic, partial [Cucurbita arg...	[more]
XP_022973325.1	3.9e-95	62.65	DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucurbita m...	[more]
XP_022949935.1	8.7e-95	62.65	DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucurbita m...	[more]
XP_023520615.1	1.5e-94	62.35	DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucurbita p...	[more]
XP_038906365.1	7.3e-94	62.54	DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X1 [Beni...	[more]

BLAST of Spg032945 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P45951	3.0e-34	34.31	DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic OS=Arabidopsis t...	[more]
P37454	1.0e-05	47.83	Exodeoxyribonuclease OS=Bacillus subtilis (strain 168) OX=224308 GN=exoA PE=1 SV...	[more]
A0MTA1	3.0e-05	42.05	DNA-(apurinic or apyrimidinic site) endonuclease OS=Danio rerio OX=7955 GN=apex1...	[more]
P51173	3.3e-04	48.98	DNA-(apurinic or apyrimidinic site) endonuclease OS=Dictyostelium discoideum OX=...	[more]

BLAST of Spg032945 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IB28	1.9e-95	62.65	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1GE66	4.2e-95	62.65	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1DMA4	7.4e-92	63.74	DNA-(apurinic or apyrimidinic site) endonuclease OS=Momordica charantia OX=3673 ...	[more]
A0A6J1DIY8	9.7e-92	62.71	DNA-(apurinic or apyrimidinic site) endonuclease OS=Momordica charantia OX=3673 ...	[more]
A0A6J1DIZ5	9.7e-92	62.71	DNA-(apurinic or apyrimidinic site) endonuclease OS=Momordica charantia OX=3673 ...	[more]

BLAST of Spg032945 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41460.1	2.2e-35	34.31	apurinic endonuclease-redox protein	[more]
AT2G41460.2	2.2e-35	34.31	apurinic endonuclease-redox protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003034	SAP domain	SMART	SM00513	sap_9	coord: 102..136 e-value: 3.1E-5 score: 33.4
IPR003034	SAP domain	PROSITE	PS50800	SAP	coord: 102..136 score: 10.026051
IPR036361	SAP domain superfamily	GENE3D	1.10.720.30	SAP domain	coord: 81..142 e-value: 9.6E-6 score: 27.1
IPR036361	SAP domain superfamily	SUPERFAMILY	68906	SAP domain	coord: 100..136
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 287..372 e-value: 2.9E-15 score: 58.5
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 301..360
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..80
None	No IPR available	PANTHER	PTHR22748:SF12	DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE	coord: 276..361
IPR004808	AP endonuclease 1	PANTHER	PTHR22748	AP ENDONUCLEASE	coord: 276..361
IPR020847	AP endonuclease 1, binding site	PROSITE	PS00726	AP_NUCLEASE_F1_1	coord: 349..358

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg032945.1	Spg032945.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0004518	nuclease activity