Spg032943 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg032943
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CRM domain-containing protein
Location	scaffold11: 14767673 .. 14775272 (+)
RNA-Seq Expression	Spg032943
Synteny	Spg032943

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTGTTCTTCAGATCATCAGACTTCTCCAACCAAAGGGTTGCTCTTCTCATCGACAGACTTCACCAACCCGTACCTTGGCCGGGGAACTGATCAACTGGAGGATCTTCATCGTCTTGATGTACGAAGGTGGTGAAATCGACGATGAAGATCCCCAGTTGTGATCCATTTCCTGTCCAAAAAGTGTCTGGAACAATCTATGAAGATACTCGCATCCCGTCCAAAAGACGACTTTTTGGAAATAATTTTTTTTTCCATCTTTGATTTCGTAAATTTTTTTGGCCTGTTCATTGTCGTTCCCCAGCGTGACGGGTTGGGAATTCCCGCTCGCGGGGTTGTCAGAAACGTGTGGTGGTGAGTCGCTAATGGATGGCTAGAGAGTGGCAGGGCGGGCTGACGTCGATTGAGGTTGGGTAGTTAGACAGGAGGCAGCGGGGGTCTTTTGGGTGTGTGGTGACATCCATTATTGCCGAACGAAAAGGATCATCCATGCAAAAATCTCCTCTATCTTTCTCGTTCTCTGGCAGCCACCCACGACGCCAGTATCCCTCTCTCTCTCGGCTTCTCCTTCTCCAGCGTCGTCTCCCTCTTCCCTCGCTGTCTCCTCCACGCCGGCGAACAGCAGACCCACATCGTTCTCCCTTCAATCCGCGCGGTTTTGCTCCTTTTCGGGGCACCTCCGCGAGACCCACGGCTTGAATCTTCTCCCTCTTTTTCTCTCATGCGGTAAGGTCCCTTTTCTTCTCGTTTTCGTTCAGTTTCGGCAAGCAACGATCTCAATCTGTCTCTTTCTCTCGTTCTCAGCCAGGACCCGCGAGCAGTAAGCAACCCACGCGGCGAGAAGTTCGTTCCTCTTCATTTTCGGCAATTCCAGCGTGCTCGGCTTCTTCCGGTTGCTTCAATCGGCAGGACCCATACTCGAATAGGTCCCAAATCGAGTTGCCCATAGCCTTTGGTGTTCAATTTGGCGACAGACTCCGGCGAGTCCTGTCTAGCGTATAATTGGGTCTTTAGGTAAGATTTGGCACTGACCCACTTCCAATTGCTCTTGGTTTATAGTGCCCAATCCTTATCGATTCTAAATTTGCAGGTTTAAGCTTCTTTGAATGCCAACCAGCAGCATTTTGGGCTTAAACTTGGCTTTCTTTTAATACTCACAATCCAAACAGTCTTGGAGTTGAACACTCATAGGCTAGGACGTTTGGATTTGTGATTTCAACTTCCTTCGGTCATTGCACAACAATCATTTGAGGCCGTTGGGTGCTGATCGATAAGTTCTAGCGCACCCTAGCCATTCTAGTGTTGTTAATAAGTGCGTTAAATCAATTCCTAATCCTTAGAAAGTCATTGCTTGTAGTTCGGGCTCTTTCAAGCTCTTCTGGTTAAGAATCAAGTTGGTTCCAATAAGAAAACCTTCCCTAAGCGTTCTTTAGATTAAAATAGGTTCTTAGGCTTGGTTTTGTCTCTTAAACGATTGTCTTGCTATTTAGGAGCTCGGTTGGACTGTTTTAGAATCGCTTAGGAGCGCAATAGGTAAGTAGTTTCTACTTTGATTGTGTGATGCATGTTGCGTGTTTTATCTGTTATACTATGACCTTTTTAAGAATTGTATATACTTTGAACTAGTTGAGCATGCTTGGATGCTTGTTGTGGAATTGCATGGTAATGGGCATGTTGAACTCCTGTGTGGTGATAGAATTGCATGTTTCATGATCTTGTATGCTTAGTTGGATGAGTCATGGAAAGTATGGTTGTGATATTTCTATATCGTTATAGTCATCTGAATTGTTAATGCACATCTGGGTTGTGAGCTTGCTTAGTGAAAAGAGGTCAGAGAACCTTGAGTTGAGTAAAGGAGAGTGCCAGGGTCTCGGGTATAAATGGTCGAGGACTAACATTGTGATAAAAGGTGTGAGTTAGATATCAGGGCCTCGGGTATAAATGATTGAGGGTTGATATTGTTTCGAGGAAAGTAAAGTGATTATCAGGGCCTCGGATATGAATGGTCGGGGTTGATATATTACTATTGGATGTCGAGGCCTCGGGTATAAATGGTCTGGGGTCGACATGCCAATGTTAGATAAAGAGGAGTATCGAGGCCTTGGGTGTAAATGGTCAAGGGTTGATGTGATGAGTCTTGAGGCTAGTATTGAGGCCTTGAGTATAAATGGTCAAGGGTCAATACGTTGCTTAGTCATCGAGGCCTTGGGTGTAAATTGTCAAGGGTCGATTGTGCACTTCGAGGCCTTAGGTATAAATGGTGAAGGATCGAACGCTGAGCTCTGTAGAGAAGTGTAGAGACCCTGGATATAAATGGTCAGGGTTTGGTGCAACTTGAAGGGTCAGTCTTGGAGAGCTTTGCGGAGCATGACGCGGAAATCACGTGTTGGGATGTGTTTGCGGAGCGTGATGCGGAAATCATATGTTGGGATGTGTTTGTGGAGCATGACGCAAAAATCATGTGTTGGGATGTGAGTGCGGAGCGTGACGTGGAAATCACGTGATGAGTGTGCGGGCATGGCGTGGAAACAATGTGAGGGTGCGTAGAATGATGTGTGGGTTCATGTTGTCATCCTGTTGTTTTAAACATGTGCTGCATTACTTGATTTATCGCTTAAAAAGCATGTTGGATGCGTGTATTGAGCATAATGTTTGTTGGTTGTTGTTTGGTGGTTCACCAGGTGTGAGCTACTTATTAGTACTGTGGTTGTACTGATACCCTCCCTTTTTTCCCCCAATATTTTCCGTTTATGCAAGTGAGCTCACTATGAGGGCGGTGATGCTGAGGAGGAGGCTCGCAAGGAATGATCTTAGTGGCTGAGTTGTTTCATTTACTTGCCTGTTGAGATAGGACATTAGTTGTTGTTCTAGTCGGTTAGGTTGATTTAGGCTACGAAATCTTTTGGAATTGCCTTGAGTATTGAGTTAGTAATCTTTTTCTTGTTTTCCGTTGCGGAAGGTTTAATCAAGTTTTGGCTATTAAAGTCGTCTAATTGAAATGTCCCTTTATGCTTGTTTAGATGTTTAGATTTAGGTTGTGTTGATGCAAGATCTAACTCGCTTGTTTTGGTGGTAGTTTGAAGTCTGTTATGTTGACGTGTGATCTTGTGGAAGTTTGTAGTTGGGTGGCTTATCATTAGAAGTGCGTTTCCCTTGTTTAACAGGTTAAATAAAATTTTGGTTTAGTCCTATGTATGATGTTATGTTGCCAAAATTTTTGGAGCACTCGGTCAATTTGGAATAGGAGTTAGTAATGTCGCTACATTAGTTTATAAAAGAACTTGGGGTGTTAGCGGGCATATTAGAATTCACTTAATTTTTACATGATTGACCATGGGGTTTCCACTGGAGCTCTAATCACGCACATCATGAACTCACGTCTGGCCCTCACCTTGCTCTCTCAACCATCATCTTTCATTTCACTCCGTACACTCCTTGAACCGTGCATTGATCTCAATGCATCGTCTTTGATTAGATGTAGAGCAGGTACCAAATCCAGTCTCAGTTCATAATTGAATGCAAAACTAACTACAAATTTCTCTTATCCCCTTGGGTCTTAGCTTTCTACTTTGTTTCATAGTTGAATACTGCAAGCAAGTGATAATTAAAACTGTGAGAACAAAACAGGACAACCGTCTTGAAACTTGTAGTGAGAAATGCCTAGGTGATTTCATTATCTCTTGTATTTTTCTTCCTGTTGAAGTGCCGTTTTAGTTCAAATGAAATAGGAGAAAGAAAAAAATTGATTGAACCCAATCACTTAACTAAACTACAATTTTGTAATTGTTGTTGGTTTGACTCCGGTTATTTGTGAATGCCAGTGTGGTTGTGTCTGATTCAGTATGAACAGTTTTGGCAAATCGAATTGATAAGCCTAGCTGTTTGTAGTCTAATTGTATTGCCTGTAATTGCATTGGAGGTATGATATATGGAGTTATTCAATTATTTATAAGATGTATGTATATATTTCCATTATTGAAAGTTTTCAAGATAAAGTTGTATATCGTTTAAGGATCTTGATTAAATTTGTTTTCCGTTAAGAATGAATGAGTTGTAGATACTTTCTTAAATTTGTCTCCGCGGCTTCCTTTTTCTTTTGCAGCATATTCAAATGGAATTATGGTATCAGGACAACAAGCAATAATATAAGACAGATAGTTGATATATCATATATGGCAAAATCTTTGTTTTGTAATCTTCGTAGAGCTTCTTTGCTTCTCAGATCTTCATTTCTGAACCAATCGTCTTTTAGGTACTATTCAACTGAAATTCTTCCATTTTCTTTACTAGAATCTCGATGTTTCTTACTTTTAAATAGCCATTTTCATTCCCTTTTACTTTGAGTGTCCAAGTTAGTGATGAAACTTCTTTGTTGATTTGTGCCCTCTTCTTTTGATGATTCTAAAATTTATTCTCGCTTGTCAGGTTTGAGATGGGAAGAAAATGGCTTGTGTTTGGCTTTGAAAGATAGAAATAGTGTAGAGTCTTTAACATGTATTAGTTTTTGATGAATTTGCTGGTTGAAATTTACGGTGTTCCCACCATATATTCTGTTGCAGACCTATTCTTGGGGTCCCTGACACCACATTCTCTCAATTCAAACACTTTTCTCTATCCAACGTCTCAAAACCTTTGTTGGGATTTAGAAACTTAAGCCATGGTTCCGTGAATCTTATCATATCCCAAGGGAAACCAAAGTTTGAAACAAATGAGGTGGATCCTCCAAAAAAGGATAAGTGGAAGACTAAAAAAAAGTTGAAGATGCAACGAATGAGAGAGAAGCAGAAAAGAAAAGCAGCAAATAAGAAAGACCCTCGTCAACTGCGTGTTAAAGGGAAAAAAAAGCAAAGATTTTCAAATGCAGAAGAGAGAATCAAGCACAAACTGGAAAAAGTGAGCCAAAAAGAACCATTTCAAATTTTAATGGGTCTATATTGTCAATGTTTAGCTTATTTTATGGTATCACCAATGTAATTTGCATACTTTGCTCATTTCAAAAGAAAAAGAATTATTTCATAAGCATTTCTTTTATTCTACTGTTGAACTGCAGCCAGATGATTTTCAACTTAATGGATGTTGGCAACTTTTCATATGTTTTTCATTAACAGTTATAGAGATATTGTTACAGGCCAGGATTAAGGAGGCATTGCTAATGGAGAGATTAAAGCGATATGAAGTTCCTAGAGTTCAAGGTCCTATGGTGAAACCACACAATCTGACTGCTGAGGAACGGTTTTATATGAAGAAAATGGGTCAAAAGAGGTCTAATTATGTACCGATTGGAAGAAGAGGAATTTTTGGAGGTGTGATTCTAAACATGCACATGCATTGGAAGAAACACGAAACAGTTAAAGTTTTTTGCAAGCCTTGTAAACCTGGCCAAGTGCATGAGTATGCACAAGAAATCGCAAGACTGAGTGGAGGAATCCCGATACAAATAATCGGTGATGATACTATCATCTTTTATCGAGGAAAGGATTATGTGCAACCAGAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGGTACGTTTTACTATTTTCGGCGTTCATAACATATTTAGAGAATTGTTAAGCATGCCTTTTTTTTTAAAAAAAAAAAAAAAATCTGTGAGTGGCACACTCTGAACCAGTCCATCTTTATCTTTTAGCATACATAATAGTAAGGGGGGATATCAGTTAGACTTTTTAGCTTTTCGGGTGTAAAATAGTGCATGAGAGTGAGCTGTGTAGGAAGTAACAGTATTGAAGTTAGAGAAGTGTGAAGCTCACCTACTTTTTTAAGAAGAGAAACATAATTTCATTGATTAATTAAATATAGGAGAAATAACTCTAAACGGTGAATTACAAGAAAGTTTTCCAATTAGAAATCAAGTAAAAAAGACTATAATCAACAAAAGGGTGTTTACATTTACACCAATACAAAGCGTGAAAAGAAATCAAATCCATACCAATACAAAGCAATCAAATCCATGAAATTATCAAAGGTTGAGAAAGCATCCTTGAAGTGTGAAGCTCACCTATGCTAATCCCTTTGGTTTTTCGATTGTTGGAGTGTCAATACTAGGGAGGGACGATTTTAGCCCCTTGGAGATTGGGAGAGTTCGTGAGTTTGTATCGTAAAAATACTAATTAGCAAGGTAGTTTGTCTAAAGCTATTTTTGGACTTAAGATCAATAGAGGCAAAAACTTCATTATTGGTATGAATTGTTGCCCTTCTAAGCTTCGATCTTGGGCCTTATTGGTTGGATGTGAGGTGGATCGACTTTCTTCCTCTTATCTTGGGCTTCCGCTAGGAGGAAATTTGAGGAGCAAAGTGTTTTGGCATCTGGTTTTGGATAAGGTTAAGAGACGTTTGTCCACTTGGAGGAAGGCTTTTTTTCCAAAAAAGAGGAAGACTTTTATACAATCGGTGTTTAGTAGATTTTCCGGTTACTTTTTATCTCTCTTCAGGATGCCAGTTTCTATGAGTAAGATTATGGTGCGAGTGATTAGGAATTTCTTGTGTGTGGGGGGGGGGTCCCATTTGGTTAAGTGGGAGCTGGTGGTTAAGTCTAGGGTCTAGGGATAGGAAGCTTGAGTTTACGTAATGAGGCCTTGCAAGCTAAATGGTTGTGACATTTTTGATGGAGTCTAATGCTTTGTGGCACAAGGTTATTGTGACTTGTGAGTTGATATGATCCACATTCCATATCCACATCCTTTTGGGTGAGTTACTATTGGTGGTACCGAAGGGCCTTACATATATAGACCCGAACTTTCATTGAGAAAAAAAGAAAGAATACGAGGGCATAAAAAAAATCAAGCGCCAAAAAAGGAACCCAACTATAGAAAGGGATTTCAATCAATCAAAATGAGTCCTAACGGATAATTAAAAAAGGCCGAAGGTGAGGTTTTTTATTTGGCAAGTTCTCCATGGTAGGTTTAATACCTTTGATAGGCTCCTGAGAAGGAATACCCCTTTATTTGGCCCATTTTGTTGCAGCCTTTGTCCGAAGGCGGAGGAAGATTTAGATCATATTTTTTGGAGTTGTGATTTTGCCCACTCCAGTTGGGACCTTTTCTTTGATGCGTTTGGGCGGCAGCGGATCAGCTACCCAGATTTGAGAGTGTTGATCGAAGAGTTCCTCCTCAATTCGACCCATCATGGAAAAGGAAGATTTTTATGGTAGGCCGGCATGTGTGCGCTCATATGGAACTTATGAGGAGAGAGAAATAACAGGATTTTTAGGGGGTAGTTAGAAGCCTGGGTGATGTATGGTCTTTATCAAGATTCCATGCTTCCCTTTGGGCCTCAGTTTACAAGTTTATTTTGTAATTATCTTTTAGGCCTTATCTTATTGGATTGGAGCCCCTTCCTTTAAGGGGACTCCCTTTTGTGGGCTTGTTTTTTTTTTTATGCCCTTGTATTCTTTCATTTTTTTTTCAATGAAAGCTGATTTTTCTATCCCAAAAAAAAAAAGGCCTTAGATACTGAGGCCCAAAACAAAACATAGAACCTGATATTTGACCAAACATCACAAGGCAATCTCTCCATCCCTGAAAAGATTCTATTTTTCCTCTCCCCTACAAACCCCAAATAAGAGTACAAATGCAA

mRNA sequence

GGTTGTTCTTCAGATCATCAGACTTCTCCAACCAAAGGGTTGCTCTTCTCATCGACAGACTTCACCAACCCGTACCTTGGCCGGGGAACTGATCAACTGGAGGATCTTCATCGTCTTGATCGTGACGGGTTGGGAATTCCCGCTCGCGGGGTTGTCAGAAACGTGTGGTGTTTCGGCAAGCAACGATCTCAATCTGTCTCTTTCTCTCGTTCTCAGCCAGGACCCGCGAGCAGTAAGCAACCCACGCGGCGAGAAGTTCGTTCCTCTTCATTTTCGGCAATTCCAGCGTGCTCGGCTTCTTCCGGTTGCTTCAATCGGCAGGACCCATACTCGAATAGGTCCCAAATCGAGTTGCCCATAGCCTTTGGTGTTCAATTTGGCGACAGACTCCGGCGAGTCCTGTCTAGCGAGCTCGGTTGGACTGTTTTAGAATCGCTTAGGAGCGCAATAGTTGAGCATGCTTGGATGCTTGTTGTGGAATTGCATGGTAATGGGCATGTTGAACTCCTGTGTGGTGATAGAATTGCATGTTTCATGATCTTTGAAAAGAGGTCAGAGAACCTTGAGTTGAGTAAAGGAGAGTGCCAGGGTCTCGGGTATAAATGGTCGAGGACTAACATTGTGATAAAAGGCCTCGGGTATAAATGGTCTGGGGTCGACATGCCAATGTTAGATAAAGAGGAGTATCGAGGCCTTGGGTGTAAATGGTCAAGGGTTGATGTGATGAGTCTTGAGGCTAGTATTGAGGCCTTGAGTATAAATGGTCAAGGGTCAATACGTTGCTTAGTCATCGAGGCCTTGGGTGTAAATTGTCAAGGGTCGATTGTGCACTTCGAGGCCTTAGGGTCAGTCTTGGAGAGCTTTGCGGAGCATGACGCGGAAATCACGTGTTGGGATGTGTTTGCGGAGCGTGATGCGGAAATCATATGTTGGGATGTGTTTGTGGAGCATGACGCAAAAATCATGTGTTGGGATTATGAACAGTTTTGGCAAATCGAATTGATAAGCCTAGCTGTTTGTAGTCTAATTGTATTGCCTGTAATTGCATTGGAGATAGTTGATATATCATATATGGCAAAATCTTTGTTTTGTAATCTTCGTAGAGCTTCTTTGCTTCTCAGATCTTCATTTCTGAACCAATCGTCTTTTAGACCTATTCTTGGGGTCCCTGACACCACATTCTCTCAATTCAAACACTTTTCTCTATCCAACGTCTCAAAACCTTTGTTGGGATTTAGAAACTTAAGCCATGGTTCCGTGAATCTTATCATATCCCAAGGGAAACCAAAGTTTGAAACAAATGAGGTGGATCCTCCAAAAAAGGATAAGTGGAAGACTAAAAAAAAGTTGAAGATGCAACGAATGAGAGAGAAGCAGAAAAGAAAAGCAGCAAATAAGAAAGACCCTCGTCAACTGCGTGTTAAAGGGAAAAAAAAGCAAAGATTTTCAAATGCAGAAGAGAGAATCAAGCACAAACTGGAAAAAGCCAGGATTAAGGAGGCATTGCTAATGGAGAGATTAAAGCGATATGAAGTTCCTAGAGTTCAAGGTCCTATGGTGAAACCACACAATCTGACTGCTGAGGAACGGTTTTATATGAAGAAAATGGGTCAAAAGAGGTCTAATTATGTACCGATTGGAAGAAGAGGAATTTTTGGAGGTGTGATTCTAAACATGCACATGCATTGGAAGAAACACGAAACAGTTAAAGTTTTTTGCAAGCCTTGTAAACCTGGCCAAGTGCATGAGTATGCACAAGAAATCGCAAGACTGAGTGGAGGAATCCCGATACAAATAATCGGTGATGATACTATCATCTTTTATCGAGGAAAGGATTATGTGCAACCAGAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGCTTCGATCTTGGGCCTTATTGGTTGGATGTGAGGTGGATCGACTTTCTTCCTCTTATCTTGGGCTTCCGCTAGGAGGAAATTTGAGGAGCAAAGTGTTTTGGCATCTGGTTTTGGATAAGGTTAAGAGACTTGATATGATCCACATTCCATATCCACATCCTTTTGGGTTTAATACCTTTGATAGGCTCCTGAGAAGGAATACCCCTTTATTTGGCCCATTTTGTTGCAGCCTTTGTCCGAAGGCGGAGGAAGATTTAGATCATATTTTTTGGAGTTGTGATTTTGCCCACTCCAGTTGGGACCTTTTCTTTGATGCGTTTGGGCGGCAGCGGATCAGCTACCCAGATTTGAGAGTGTTGATCGAAGAGTTCCTCCTCAATTCGACCCATCATGGAAAAGGAAGATTTTTATGGTAG

Coding sequence (CDS)

GGTTGTTCTTCAGATCATCAGACTTCTCCAACCAAAGGGTTGCTCTTCTCATCGACAGACTTCACCAACCCGTACCTTGGCCGGGGAACTGATCAACTGGAGGATCTTCATCGTCTTGATCGTGACGGGTTGGGAATTCCCGCTCGCGGGGTTGTCAGAAACGTGTGGTGTTTCGGCAAGCAACGATCTCAATCTGTCTCTTTCTCTCGTTCTCAGCCAGGACCCGCGAGCAGTAAGCAACCCACGCGGCGAGAAGTTCGTTCCTCTTCATTTTCGGCAATTCCAGCGTGCTCGGCTTCTTCCGGTTGCTTCAATCGGCAGGACCCATACTCGAATAGGTCCCAAATCGAGTTGCCCATAGCCTTTGGTGTTCAATTTGGCGACAGACTCCGGCGAGTCCTGTCTAGCGAGCTCGGTTGGACTGTTTTAGAATCGCTTAGGAGCGCAATAGTTGAGCATGCTTGGATGCTTGTTGTGGAATTGCATGGTAATGGGCATGTTGAACTCCTGTGTGGTGATAGAATTGCATGTTTCATGATCTTTGAAAAGAGGTCAGAGAACCTTGAGTTGAGTAAAGGAGAGTGCCAGGGTCTCGGGTATAAATGGTCGAGGACTAACATTGTGATAAAAGGCCTCGGGTATAAATGGTCTGGGGTCGACATGCCAATGTTAGATAAAGAGGAGTATCGAGGCCTTGGGTGTAAATGGTCAAGGGTTGATGTGATGAGTCTTGAGGCTAGTATTGAGGCCTTGAGTATAAATGGTCAAGGGTCAATACGTTGCTTAGTCATCGAGGCCTTGGGTGTAAATTGTCAAGGGTCGATTGTGCACTTCGAGGCCTTAGGGTCAGTCTTGGAGAGCTTTGCGGAGCATGACGCGGAAATCACGTGTTGGGATGTGTTTGCGGAGCGTGATGCGGAAATCATATGTTGGGATGTGTTTGTGGAGCATGACGCAAAAATCATGTGTTGGGATTATGAACAGTTTTGGCAAATCGAATTGATAAGCCTAGCTGTTTGTAGTCTAATTGTATTGCCTGTAATTGCATTGGAGATAGTTGATATATCATATATGGCAAAATCTTTGTTTTGTAATCTTCGTAGAGCTTCTTTGCTTCTCAGATCTTCATTTCTGAACCAATCGTCTTTTAGACCTATTCTTGGGGTCCCTGACACCACATTCTCTCAATTCAAACACTTTTCTCTATCCAACGTCTCAAAACCTTTGTTGGGATTTAGAAACTTAAGCCATGGTTCCGTGAATCTTATCATATCCCAAGGGAAACCAAAGTTTGAAACAAATGAGGTGGATCCTCCAAAAAAGGATAAGTGGAAGACTAAAAAAAAGTTGAAGATGCAACGAATGAGAGAGAAGCAGAAAAGAAAAGCAGCAAATAAGAAAGACCCTCGTCAACTGCGTGTTAAAGGGAAAAAAAAGCAAAGATTTTCAAATGCAGAAGAGAGAATCAAGCACAAACTGGAAAAAGCCAGGATTAAGGAGGCATTGCTAATGGAGAGATTAAAGCGATATGAAGTTCCTAGAGTTCAAGGTCCTATGGTGAAACCACACAATCTGACTGCTGAGGAACGGTTTTATATGAAGAAAATGGGTCAAAAGAGGTCTAATTATGTACCGATTGGAAGAAGAGGAATTTTTGGAGGTGTGATTCTAAACATGCACATGCATTGGAAGAAACACGAAACAGTTAAAGTTTTTTGCAAGCCTTGTAAACCTGGCCAAGTGCATGAGTATGCACAAGAAATCGCAAGACTGAGTGGAGGAATCCCGATACAAATAATCGGTGATGATACTATCATCTTTTATCGAGGAAAGGATTATGTGCAACCAGAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGCTTCGATCTTGGGCCTTATTGGTTGGATGTGAGGTGGATCGACTTTCTTCCTCTTATCTTGGGCTTCCGCTAGGAGGAAATTTGAGGAGCAAAGTGTTTTGGCATCTGGTTTTGGATAAGGTTAAGAGACTTGATATGATCCACATTCCATATCCACATCCTTTTGGGTTTAATACCTTTGATAGGCTCCTGAGAAGGAATACCCCTTTATTTGGCCCATTTTGTTGCAGCCTTTGTCCGAAGGCGGAGGAAGATTTAGATCATATTTTTTGGAGTTGTGATTTTGCCCACTCCAGTTGGGACCTTTTCTTTGATGCGTTTGGGCGGCAGCGGATCAGCTACCCAGATTTGAGAGTGTTGATCGAAGAGTTCCTCCTCAATTCGACCCATCATGGAAAAGGAAGATTTTTATGGTAG

Protein sequence

GCSSDHQTSPTKGLLFSSTDFTNPYLGRGTDQLEDLHRLDRDGLGIPARGVVRNVWCFGKQRSQSVSFSRSQPGPASSKQPTRREVRSSSFSAIPACSASSGCFNRQDPYSNRSQIELPIAFGVQFGDRLRRVLSSELGWTVLESLRSAIVEHAWMLVVELHGNGHVELLCGDRIACFMIFEKRSENLELSKGECQGLGYKWSRTNIVIKGLGYKWSGVDMPMLDKEEYRGLGCKWSRVDVMSLEASIEALSINGQGSIRCLVIEALGVNCQGSIVHFEALGSVLESFAEHDAEITCWDVFAERDAEIICWDVFVEHDAKIMCWDYEQFWQIELISLAVCSLIVLPVIALEIVDISYMAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLSNVSKPLLGFRNLSHGSVNLIISQGKPKFETNEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVPRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRLRSWALLVGCEVDRLSSSYLGLPLGGNLRSKVFWHLVLDKVKRLDMIHIPYPHPFGFNTFDRLLRRNTPLFGPFCCSLCPKAEEDLDHIFWSCDFAHSSWDLFFDAFGRQRISYPDLRVLIEEFLLNSTHHGKGRFLW

Homology

[Close]

BLAST of Spg032943 vs. NCBI nr
Match: XP_038903000.1 (CRM-domain containing factor CFM9, mitochondrial [Benincasa hispida] >XP_038903001.1 CRM-domain containing factor CFM9, mitochondrial [Benincasa hispida])

HSP 1 Score: 491.1 bits (1263), Expect = 1.7e-134
Identity = 251/272 (92.28%), Postives = 261/272 (95.96%), Query Frame = 0


Query: 358 MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLSNVSKPLLGFRNLSH 417
           MAKSLF NLRRASLL RSS LNQ SFRPILGV DT FSQ  +F+L N+SKPLLGFRNLSH
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQPSFRPILGVSDTIFSQINNFTLPNISKPLLGFRNLSH 60

Query: 418 GSVNLIISQGKPKFETNEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGK 477
           GSVNL+ISQGKPKFET+EVDPPKKDKWKTK+KLKMQR REKQKRKA NKKDPRQLRVKGK
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKRKLKMQRKREKQKRKAENKKDPRQLRVKGK 120

Query: 478 KKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVPRVQGPMVKPHNLTAEERFYMKKMG 537
           KKQ+FSNAEERIKHKLEKARIKEALL+ERLKRYEVPRVQGP+VKPHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLVERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMG 180

Query: 538 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 597
           QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 598 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR 630
           QIIGDDTIIFYRGK+YVQPEVMSPIDTLSKKR
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKR 272

[Close]

BLAST of Spg032943 vs. NCBI nr
Match: XP_022935659.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita moschata])

HSP 1 Score: 490.3 bits (1261), Expect = 2.9e-134
Identity = 249/272 (91.54%), Postives = 263/272 (96.69%), Query Frame = 0


Query: 358 MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLSNVSKPLLGFRNLSH 417
           MAKSLF NLRRASLL RSS LNQ  FRP+LGVPD+TFS+ K+F L N+SKPLLGFRNLS+
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSY 60

Query: 418 GSVNLIISQGKPKFETNEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGK 477
           GSVNL+ISQGKPKFET+EVDPPKKDKWKTKKKLKMQR REKQKRKAANKKDPRQLRVKGK
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120

Query: 478 KKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVPRVQGPMVKPHNLTAEERFYMKKMG 537
           KKQ+FSNAEERIKHKLEKARIKEALL+ERLKRYEVPRVQGP+V+PHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180

Query: 538 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 597
           QKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 598 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR 630
           QIIGDDTIIFYRGK+YVQPEVMSPIDTLSKKR
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKR 272

[Close]

BLAST of Spg032943 vs. NCBI nr
Match: KAG7017679.1 (putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 489.2 bits (1258), Expect = 6.5e-134
Identity = 248/272 (91.18%), Postives = 263/272 (96.69%), Query Frame = 0


Query: 358 MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLSNVSKPLLGFRNLSH 417
           MAKSLF NLRRASLL RSS LNQ  FRP+LGVPD+TFS+ K+F L N+S+PLLGFRNLS+
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSY 60

Query: 418 GSVNLIISQGKPKFETNEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGK 477
           GSVNL+ISQGKPKFET+EVDPPKKDKWKTKKKLKMQR REKQKRKAANKKDPRQLRVKGK
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120

Query: 478 KKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVPRVQGPMVKPHNLTAEERFYMKKMG 537
           KKQ+FSNAEERIKHKLEKARIKEALL+ERLKRYEVPRVQGP+V+PHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180

Query: 538 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 597
           QKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 598 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR 630
           QIIGDDTIIFYRGK+YVQPEVMSPIDTLSKKR
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKR 272

[Close]

BLAST of Spg032943 vs. NCBI nr
Match: XP_023526219.1 (CRM-domain containing factor CFM2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 481.1 bits (1237), Expect = 1.8e-131
Identity = 245/272 (90.07%), Postives = 259/272 (95.22%), Query Frame = 0


Query: 358 MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLSNVSKPLLGFRNLSH 417
           MAKSLF NLRRASLL RSS LNQ  FRP+ GVPD+TFS  K F L N+SKPLLGFRNLS+
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVFGVPDSTFSHIKIFPLLNISKPLLGFRNLSY 60

Query: 418 GSVNLIISQGKPKFETNEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGK 477
           GSVNL+ISQGKPKFET+EVDPPKKDKWKTKKKLK+QR REKQKRKAANKKDPRQLRVKGK
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKVQRKREKQKRKAANKKDPRQLRVKGK 120

Query: 478 KKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVPRVQGPMVKPHNLTAEERFYMKKMG 537
           KKQ+FSNAEERIKHKLEKARIKEALL+ERLKRYEVP+VQGP+V+PHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPKVQGPVVEPHNLTAEERFYMKKMG 180

Query: 538 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 597
           QKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKVFCKPCKPGQV EYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVREYAQEIARLSGGIPI 240

Query: 598 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR 630
           QIIGDDTIIFYRGK+YVQPEVMSPIDTLSKKR
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKR 272

[Close]

BLAST of Spg032943 vs. NCBI nr
Match: XP_022983806.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita maxima])

HSP 1 Score: 479.9 bits (1234), Expect = 4.0e-131
Identity = 244/272 (89.71%), Postives = 258/272 (94.85%), Query Frame = 0


Query: 358 MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLSNVSKPLLGFRNLSH 417
           MAKSLF NLRRASLL RS  L Q  FRP+LGVPD+TFS  K+  L N+SKP LGFRNLS+
Sbjct: 1   MAKSLFHNLRRASLLFRSLSLKQPFFRPVLGVPDSTFSHIKNIPLLNISKPFLGFRNLSY 60

Query: 418 GSVNLIISQGKPKFETNEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGK 477
           GSVNL+ISQGKPKFET+EVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGK
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGK 120

Query: 478 KKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVPRVQGPMVKPHNLTAEERFYMKKMG 537
           KKQ+FSNAEERIKHKLEKARIKEALL+ERLKRYEVP+VQGP+V+PHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPKVQGPVVEPHNLTAEERFYMKKMG 180

Query: 538 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 597
           QKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 598 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR 630
           QIIGDDTIIFYRGK+YVQP VMSPIDTLSKKR
Sbjct: 241 QIIGDDTIIFYRGKEYVQPVVMSPIDTLSKKR 272

[Close]

BLAST of Spg032943 vs. ExPASy Swiss-Prot
Match: Q67XL4 (Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g25440 PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 9.8e-32
Identity = 93/204 (45.59%), Postives = 124/204 (60.78%), Query Frame = 0


Query: 429 PKFETNEVDPPKKDKWKTKKKLKMQRM-REKQKRKAANKKDPRQLRVKGKKKQRFSNAEE 488
           P  ET + D  K +   ++      ++ R+K K K A  +  +  R K KK+     +EE
Sbjct: 80  PARETGDDDISKSENSSSQDGDSCTKLKRKKLKGKRAVVRWLKFFRWKKKKEFERMTSEE 139

Query: 489 RIKHKLEKARIKEALLMERLKRYEVPRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIG 548
           +I +KL KAR KE  LME +K+ E          P  LT EE FY  KMG K  NYVP+G
Sbjct: 140 KILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVG 199

Query: 549 RRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIF 608
           RRGI+ GVILNMH+HWKKH+T++V  K   P +V E A E+ARL+GGI + +   +TII 
Sbjct: 200 RRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIM 259

Query: 609 YRGKDYVQP--EVMSPIDTLSKKR 630
           YRGK+YVQP  E+MSP  TL +K+
Sbjct: 260 YRGKNYVQPPTEIMSPRITLPRKK 283

[Close]

BLAST of Spg032943 vs. ExPASy Swiss-Prot
Match: Q9LT57 (CRM-domain containing factor CFM9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CFM9 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.8e-31
Identity = 78/184 (42.39%), Postives = 119/184 (64.67%), Query Frame = 0


Query: 446 TKKKLKMQRMREKQKRKAANKKDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLME 505
           T +   M+   E + RK +  K  R++R   K K++    EER+ + L++A+ K ALL++
Sbjct: 14  TSRGRSMRSKVESRMRKESG-KTLREIRRAKKLKKKLMTDEERLIYNLKRAKKKVALLLQ 73

Query: 506 RLKRYEVPRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKK 565
           +LK+Y++P +  P+  P   T+E+    KK+G K  NYVP+G RG+FGGV+ NMHMHWK 
Sbjct: 74  KLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMHWKF 133

Query: 566 HETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTL 625
           HETV+V C      ++ E A  IARLSGG+ I I    TII +RG++Y QP+ + P++TL
Sbjct: 134 HETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLIPVNTL 193

Query: 626 SKKR 630
           +K++
Sbjct: 194 TKRK 196

[Close]

BLAST of Spg032943 vs. ExPASy Swiss-Prot
Match: Q2R1U8 (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=CFM3 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 5.2e-17
Identity = 47/125 (37.60%), Postives = 70/125 (56.00%), Query Frame = 0


Query: 522 PHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQV 581
           P  +T EERF  +K+G +   ++ +GRRG+F G I NMH+HWK  E VK+  K    G V
Sbjct: 589 PETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDV 648

Query: 582 HEYAQEIARLSGGIPI---QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRLRSWALLVG 641
            + A  +   SGGI +   ++     I+ +RGKDY +P  + P + LSK++    AL   
Sbjct: 649 KKIALSLEAESGGILVSVDKVSKGYAIVVFRGKDYARPSKLRPRNLLSKRK----ALARS 708

Query: 642 CEVDR 644
            E+ R
Sbjct: 709 IEIQR 709

[Close]

BLAST of Spg032943 vs. ExPASy Swiss-Prot
Match: F4J2U9 (CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CFM3A PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.1e-14
Identity = 53/155 (34.19%), Postives = 81/155 (52.26%), Query Frame = 0


Query: 481 RFSNAEERIKHKLEKARIKEALLMERLKRYEV---PRVQGPMVKPHNLTAEERFYMKKMG 540
           R  N   +++ KL  A  K       L + EV   P  Q     P ++T EERF  +K+G
Sbjct: 593 RHENLVRKLERKLAFAERKLLKAERGLAKVEVCLKPAEQ--REDPESITDEERFMFRKLG 652

Query: 541 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 600
            K   ++ +GRRG+F G + NMH+HWK  E VK+  K      V + A  +   SGGI +
Sbjct: 653 LKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVKKVALALEAESGGILV 712

Query: 601 ---QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR 630
              ++     II YRG+DY +P ++ P + L+K++
Sbjct: 713 SIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRK 745

[Close]

BLAST of Spg032943 vs. ExPASy Swiss-Prot
Match: F4JVH1 (CRM-domain containing factor CFM3B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CFM3B PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.0e-13
Identity = 49/158 (31.01%), Postives = 83/158 (52.53%), Query Frame = 0


Query: 478 KKQRFSNAEERIKHKL---EKARIKEALLMERLKRYEVPRVQGPMVKPHNLTAEERFYMK 537
           +K R +    +++ KL   EK  +K    + +++    P  Q   ++   +T EERF  +
Sbjct: 617 EKVRSAKLVRKLERKLAFAEKKLLKAERALAKVEESLKPAEQRTDLE--GITEEERFMFQ 676

Query: 538 KMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGG 597
           K+G K   ++ +GRRG+F G + NMH+HWK  E +K+  K        + A  +   SGG
Sbjct: 677 KLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKTLEGAQKVAMALEAESGG 736

Query: 598 IPI---QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR 630
           I +   +I     +I YRGKDY +P  + P + L+K++
Sbjct: 737 ILVSVDKISKGYAVIVYRGKDYKRPTTLRPKNLLTKRK 772

[Close]

BLAST of Spg032943 vs. ExPASy TrEMBL
Match: A0A6J1F621 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111442450 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 1.4e-134
Identity = 249/272 (91.54%), Postives = 263/272 (96.69%), Query Frame = 0


Query: 358 MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLSNVSKPLLGFRNLSH 417
           MAKSLF NLRRASLL RSS LNQ  FRP+LGVPD+TFS+ K+F L N+SKPLLGFRNLS+
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSY 60

Query: 418 GSVNLIISQGKPKFETNEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGK 477
           GSVNL+ISQGKPKFET+EVDPPKKDKWKTKKKLKMQR REKQKRKAANKKDPRQLRVKGK
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120

Query: 478 KKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVPRVQGPMVKPHNLTAEERFYMKKMG 537
           KKQ+FSNAEERIKHKLEKARIKEALL+ERLKRYEVPRVQGP+V+PHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180

Query: 538 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 597
           QKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 598 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR 630
           QIIGDDTIIFYRGK+YVQPEVMSPIDTLSKKR
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKR 272

[Close]

BLAST of Spg032943 vs. ExPASy TrEMBL
Match: A0A6J1J3F1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482313 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 1.9e-131
Identity = 244/272 (89.71%), Postives = 258/272 (94.85%), Query Frame = 0


Query: 358 MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLSNVSKPLLGFRNLSH 417
           MAKSLF NLRRASLL RS  L Q  FRP+LGVPD+TFS  K+  L N+SKP LGFRNLS+
Sbjct: 1   MAKSLFHNLRRASLLFRSLSLKQPFFRPVLGVPDSTFSHIKNIPLLNISKPFLGFRNLSY 60

Query: 418 GSVNLIISQGKPKFETNEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGK 477
           GSVNL+ISQGKPKFET+EVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGK
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGK 120

Query: 478 KKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVPRVQGPMVKPHNLTAEERFYMKKMG 537
           KKQ+FSNAEERIKHKLEKARIKEALL+ERLKRYEVP+VQGP+V+PHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPKVQGPVVEPHNLTAEERFYMKKMG 180

Query: 538 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 597
           QKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 598 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR 630
           QIIGDDTIIFYRGK+YVQP VMSPIDTLSKKR
Sbjct: 241 QIIGDDTIIFYRGKEYVQPVVMSPIDTLSKKR 272

[Close]

BLAST of Spg032943 vs. ExPASy TrEMBL
Match: A0A5A7UFD6 (CRM-domain containing factor CFM3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007520 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 1.5e-128
Identity = 238/272 (87.50%), Postives = 257/272 (94.49%), Query Frame = 0


Query: 358 MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLSNVSKPLLGFRNLSH 417
           MAKSLF NLRRASLL RSS LNQ SFRPIL +PDT FSQ K+F  +N+SKPLLGFRNLSH
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQLSFRPILVIPDTVFSQIKNFPEANISKPLLGFRNLSH 60

Query: 418 GSVNLIISQGKPKFETNEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGK 477
           GSVNL+++QGKPKFET+ VDPPKK+KWKTKKKLKMQRMR KQKRKAANK+DPRQLRVKGK
Sbjct: 61  GSVNLVVTQGKPKFETHVVDPPKKEKWKTKKKLKMQRMRSKQKRKAANKRDPRQLRVKGK 120

Query: 478 KKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVPRVQGPMVKPHNLTAEERFYMKKMG 537
           KKQ+F NA ERIK+KLE+ARIKEALL+ERLKRYEVP VQGP+VKPHNLTAEERFY+KKMG
Sbjct: 121 KKQKFPNAAERIKNKLERARIKEALLIERLKRYEVPEVQGPIVKPHNLTAEERFYIKKMG 180

Query: 538 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 597
           QKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 598 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR 630
           QIIGDDTIIFYRGK+YVQPEVMSPI TLSKKR
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIGTLSKKR 272

[Close]

BLAST of Spg032943 vs. ExPASy TrEMBL
Match: A0A1S3B7C2 (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486957 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 1.5e-128
Identity = 238/272 (87.50%), Postives = 257/272 (94.49%), Query Frame = 0


Query: 358 MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLSNVSKPLLGFRNLSH 417
           MAKSLF NLRRASLL RSS LNQ SFRPIL +PDT FSQ K+F  +N+SKPLLGFRNLSH
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQLSFRPILVIPDTVFSQIKNFPEANISKPLLGFRNLSH 60

Query: 418 GSVNLIISQGKPKFETNEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGK 477
           GSVNL+++QGKPKFET+ VDPPKK+KWKTKKKLKMQRMR KQKRKAANK+DPRQLRVKGK
Sbjct: 61  GSVNLVVTQGKPKFETHVVDPPKKEKWKTKKKLKMQRMRSKQKRKAANKRDPRQLRVKGK 120

Query: 478 KKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVPRVQGPMVKPHNLTAEERFYMKKMG 537
           KKQ+F NA ERIK+KLE+ARIKEALL+ERLKRYEVP VQGP+VKPHNLTAEERFY+KKMG
Sbjct: 121 KKQKFPNAAERIKNKLERARIKEALLIERLKRYEVPEVQGPIVKPHNLTAEERFYIKKMG 180

Query: 538 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 597
           QKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 598 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR 630
           QIIGDDTIIFYRGK+YVQPEVMSPI TLSKKR
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIGTLSKKR 272

[Close]

BLAST of Spg032943 vs. ExPASy TrEMBL
Match: A0A6J1DSE1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023468 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 2.2e-127
Identity = 240/272 (88.24%), Postives = 253/272 (93.01%), Query Frame = 0


Query: 358 MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLSNVSKPLLGFRNLSH 417
           MA SLF NLRRASLLLRS  LNQ+SFRPILGVPDT FSQFKHF L N+SKP LGFRN SH
Sbjct: 1   MANSLFYNLRRASLLLRSLSLNQASFRPILGVPDTVFSQFKHFPLPNISKPFLGFRNSSH 60

Query: 418 GSVNLIISQGKPKFETNEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGK 477
           GSV+L+ISQGKPKFET+EVDPPKK KWKTKK+LK+QR REK+KR+AANKKDPR LRVKGK
Sbjct: 61  GSVDLVISQGKPKFETHEVDPPKKYKWKTKKRLKVQRKREKEKRRAANKKDPRLLRVKGK 120

Query: 478 KKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVPRVQGPMVKPHNLTAEERFYMKKMG 537
           KKQ+FSNAEERIKHKL KARIKEALL+ERLKRYEVP VQGP+VKP NLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLXKARIKEALLIERLKRYEVPMVQGPLVKPXNLTAEERFYMKKMG 180

Query: 538 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 597
           QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKV  KPCKPGQVH+YAQEIARLSGGI I
Sbjct: 181 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVIXKPCKPGQVHDYAQEIARLSGGIAI 240

Query: 598 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR 630
           QIIGDD IIFYRGKDYVQPEVMSPIDTLSKKR
Sbjct: 241 QIIGDDMIIFYRGKDYVQPEVMSPIDTLSKKR 272

[Close]

BLAST of Spg032943 vs. TAIR 10
Match: AT2G28480.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 338.6 bits (867), Expect = 1.3e-92
Identity = 183/274 (66.79%), Postives = 222/274 (81.02%), Query Frame = 0


Query: 358 MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLSNVSKPLLGFRNLSH 417
           MA +    LR+AS  LRSS+    S R +L +    +     F L   ++P+   RN SH
Sbjct: 1   MAIAFARGLRKASSFLRSSYPLLISSR-LLPISQEFYDSTLTFVLP--TRPIC--RNFSH 60

Query: 418 --GSVNLIISQGKPKFETNEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVK 477
             G+VNL+IS+GKPKFET E+DPPKK KW TKK+LK++R +E+++R AAN+KDPR+L VK
Sbjct: 61  GYGTVNLVISEGKPKFETRELDPPKKYKWLTKKRLKLKRKKEREERNAANRKDPRRLTVK 120

Query: 478 GKKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVPRVQGPMVKPHNLTAEERFYMKK 537
           GKKK +F NAEERIK+KLEKA+IKEALL+ERLKRYEV +VQGP V+PH +T EERFY+KK
Sbjct: 121 GKKK-KFVNAEERIKYKLEKAKIKEALLIERLKRYEVAKVQGPEVRPHEITGEERFYLKK 180

Query: 538 MGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGI 597
           MGQKRSNYVPIGRRG+FGGVILNMH+HWKKHETVKV C   KPGQV +YA+E+A+LSGG+
Sbjct: 181 MGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGV 240

Query: 598 PIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR 630
           P+ IIGDDTIIFYRGK YVQP+VMSPIDTLSKKR
Sbjct: 241 PVNIIGDDTIIFYRGKGYVQPQVMSPIDTLSKKR 268

[Close]

BLAST of Spg032943 vs. TAIR 10
Match: AT4G13070.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 202.2 bits (513), Expect = 1.5e-51
Identity = 110/222 (49.55%), Postives = 152/222 (68.47%), Query Frame = 0


Query: 409 LLGFRNLSHGSVNLIISQGKPKFETNEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKD 468
           L   R LS+ ++ L       +F  N V     +   T+K+ K +R +  +K K     +
Sbjct: 69  LFSRRYLSNSTIELRTDDNVVRFAFNNVSSSGNNVVPTRKEKKWKRAKLSRKAKV---NE 128

Query: 469 PRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLMERLKRYEVPRVQGPMVKPHNLTAE 528
            R  R+K KKK    N E RI++KLEKA+ KE  L+E+L++Y+VP+       P +LT E
Sbjct: 129 LRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKEEWLIEKLRKYDVPKSPAEPYDPESLTEE 188

Query: 529 ERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPC-KPGQVHEYAQE 588
           E+ Y+K+ G+KR N+V +GRRG+FGGV+LN+H+HWKKHETVKV CKPC KPGQVHEYA+E
Sbjct: 189 EQHYLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEE 248

Query: 589 IARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR 630
           +ARLS GI I +  ++TI+ YRGK+YV+PEVMSP+DTLSK +
Sbjct: 249 LARLSKGIVIDVKPNNTIVLYRGKNYVRPEVMSPVDTLSKDK 287

[Close]

BLAST of Spg032943 vs. TAIR 10
Match: AT3G25440.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 140.2 bits (352), Expect = 6.9e-33
Identity = 93/204 (45.59%), Postives = 124/204 (60.78%), Query Frame = 0


Query: 429 PKFETNEVDPPKKDKWKTKKKLKMQRM-REKQKRKAANKKDPRQLRVKGKKKQRFSNAEE 488
           P  ET + D  K +   ++      ++ R+K K K A  +  +  R K KK+     +EE
Sbjct: 80  PARETGDDDISKSENSSSQDGDSCTKLKRKKLKGKRAVVRWLKFFRWKKKKEFERMTSEE 139

Query: 489 RIKHKLEKARIKEALLMERLKRYEVPRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIG 548
           +I +KL KAR KE  LME +K+ E          P  LT EE FY  KMG K  NYVP+G
Sbjct: 140 KILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVG 199

Query: 549 RRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIF 608
           RRGI+ GVILNMH+HWKKH+T++V  K   P +V E A E+ARL+GGI + +   +TII 
Sbjct: 200 RRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIM 259

Query: 609 YRGKDYVQP--EVMSPIDTLSKKR 630
           YRGK+YVQP  E+MSP  TL +K+
Sbjct: 260 YRGKNYVQPPTEIMSPRITLPRKK 283

[Close]

BLAST of Spg032943 vs. TAIR 10
Match: AT3G25440.2 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 140.2 bits (352), Expect = 6.9e-33
Identity = 93/204 (45.59%), Postives = 124/204 (60.78%), Query Frame = 0


Query: 429 PKFETNEVDPPKKDKWKTKKKLKMQRM-REKQKRKAANKKDPRQLRVKGKKKQRFSNAEE 488
           P  ET + D  K +   ++      ++ R+K K K A  +  +  R K KK+     +EE
Sbjct: 16  PARETGDDDISKSENSSSQDGDSCTKLKRKKLKGKRAVVRWLKFFRWKKKKEFERMTSEE 75

Query: 489 RIKHKLEKARIKEALLMERLKRYEVPRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIG 548
           +I +KL KAR KE  LME +K+ E          P  LT EE FY  KMG K  NYVP+G
Sbjct: 76  KILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVG 135

Query: 549 RRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIF 608
           RRGI+ GVILNMH+HWKKH+T++V  K   P +V E A E+ARL+GGI + +   +TII 
Sbjct: 136 RRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIM 195

Query: 609 YRGKDYVQP--EVMSPIDTLSKKR 630
           YRGK+YVQP  E+MSP  TL +K+
Sbjct: 196 YRGKNYVQPPTEIMSPRITLPRKK 219

[Close]

BLAST of Spg032943 vs. TAIR 10
Match: AT3G27550.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 138.7 bits (348), Expect = 2.0e-32
Identity = 78/184 (42.39%), Postives = 119/184 (64.67%), Query Frame = 0


Query: 446 TKKKLKMQRMREKQKRKAANKKDPRQLRVKGKKKQRFSNAEERIKHKLEKARIKEALLME 505
           T +   M+   E + RK +  K  R++R   K K++    EER+ + L++A+ K ALL++
Sbjct: 14  TSRGRSMRSKVESRMRKESG-KTLREIRRAKKLKKKLMTDEERLIYNLKRAKKKVALLLQ 73

Query: 506 RLKRYEVPRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKK 565
           +LK+Y++P +  P+  P   T+E+    KK+G K  NYVP+G RG+FGGV+ NMHMHWK 
Sbjct: 74  KLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMHWKF 133

Query: 566 HETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTL 625
           HETV+V C      ++ E A  IARLSGG+ I I    TII +RG++Y QP+ + P++TL
Sbjct: 134 HETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLIPVNTL 193

Query: 626 SKKR 630
           +K++
Sbjct: 194 TKRK 196

The following BLAST results are available for this feature:

BLAST of Spg032943 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903000.1	1.7e-134	92.28	CRM-domain containing factor CFM9, mitochondrial [Benincasa hispida] >XP_0389030...	[more]
XP_022935659.1	2.9e-134	91.54	uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbit...	[more]
KAG7017679.1	6.5e-134	91.18	putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyro...	[more]
XP_023526219.1	1.8e-131	90.07	CRM-domain containing factor CFM2, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022983806.1	4.0e-131	89.71	uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbit...	[more]

BLAST of Spg032943 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67XL4	9.8e-32	45.59	Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabid...	[more]
Q9LT57	2.8e-31	42.39	CRM-domain containing factor CFM9, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q2R1U8	5.2e-17	37.60	CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa s...	[more]
F4J2U9	1.1e-14	34.19	CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis t...	[more]
F4JVH1	2.0e-13	31.01	CRM-domain containing factor CFM3B, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Spg032943 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F621	1.4e-134	91.54	uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurb...	[more]
A0A6J1J3F1	1.9e-131	89.71	uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurb...	[more]
A0A5A7UFD6	1.5e-128	87.50	CRM-domain containing factor CFM3 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3B7C2	1.5e-128	87.50	CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Cucumis melo O...	[more]
A0A6J1DSE1	2.2e-127	88.24	uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Momord...	[more]

BLAST of Spg032943 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28480.1	1.3e-92	66.79	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT4G13070.1	1.5e-51	49.55	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G25440.1	6.9e-33	45.59	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G25440.2	6.9e-33	45.59	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G27550.1	2.0e-32	42.39	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 447..467
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 444..478
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 431..483
None	No IPR available	PANTHER	PTHR31426:SF2	GROUP II INTRON SPLICING FACTOR CRS1-LIKE	coord: 358..629
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 525..609 e-value: 6.4E-25 score: 98.8
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 525..609 e-value: 7.1E-17 score: 61.4
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 523..620 score: 18.587076
IPR035920	YhbY-like superfamily	GENE3D	3.30.110.60		coord: 524..623 e-value: 8.9E-22 score: 79.0
IPR035920	YhbY-like superfamily	SUPERFAMILY	75471	YhbY-like	coord: 524..619
IPR040286	CRM domain-containing protein At3g25440-like	PANTHER	PTHR31426	GROUP II INTRON SPLICING FACTOR CRS1-LIKE	coord: 358..629

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg032943.1	Spg032943.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding