Spg032930 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg032930
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	chromatin remodeling protein EBS isoform X2
Location	scaffold11: 14427084 .. 14433201 (-)
RNA-Seq Expression	Spg032930
Synteny	Spg032930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTGCAAAGTTCATCCATCATGCATGGGAATGACCATTGAAGAAGCAAAGAAGTTGGATCACTTTTTGTGTTCAGATTGTTCATCAAAAAATGATGTGAATAGGTCCTTGAATCATTTTCCAGTATAGGCTTTTGGTATTTTTATAATTTTGAAGATATTTTGTATAGACCATTGAATTCGCATTATGTGCAGGATTGAAGTCCGGAAGTCCTACTAGGATTGTTTTTGAAACACATTCTATTAAACTCATTATATAAATATTAGTGCTCTTGAACACAATTTGGAATAGGTGACTTATAACTTCATTTTGGTACCCCTTTGTCATTGATTGGGATAATGGTATTGCATTTTTGTTTATTTCGTTTGTTATCAATAAAATTTGAAATGACATGAACTTTCGCACTCAAACTCTTTAGTTTGCATGGGAATCCTTTTCACTCCAGGACTGCCTAATTCTACAATTGACACTAAAAACAAACCGAAAAAAAAAATTGGTGGTCTATGCCGACGCAACTTACGTCGGCATAGACAATGGAGTCATGCTCTAGGCCAACGCAAGCTTGCGCCGGCACATTATCTACGCCGACGCCAATGTGCGTCGGCGTAGATCATTCAAACCAACATATTCAGATTATCAAGGCCGACGCAATGTGCGTCGGAGTAAACCTTCTAAGCGGACGCACGATGTTTGCGTCGGCGTATACCTCTACGCCGACGTGTCTACGCCGACGACCTTGCCGACGCAATCTTCGCGTCGGGGAGTTGTCTACGCCGACGCGAGAGGGCGTTGCGTCGGCGTAGACCGAAAATCTTGTAGTGCATGGTGGGGACACTTTCGCAAAAGCTCCTTAAACCTCTCACAAGCCTCACTAAAAGTCTCATCTTCAAATTGCCTAAACCCTACTATTTCACTCCTCAATTTAGCATTCCTATTTGGTGGGAAATATTTACTCAAAAATTTTTCTGCTAACTCATTCCATGTTCTAATATTGATCTTGGAGCAAAAGAGTTTAACCACGCCTGTGCTCCATCTCTAAGAGAATACGGGAACAAAGTTAATCTAAGGGCATCTCTAGGCACTCCTTGAATTACAAAAGAATCACTAACTCCTAGAAAAGACTTAAGATGCAAATGAGGGTCTTCAGATGACAAACCATGGAATTGACCCACGGTTTGCAACATCTGAAACATTACCGGTTTCATTTCAAAATTTGCTGCCTCAATGTGAGAACGTGCAATCCCTGGATTTAACTCATCAAACATTGGAAAAGCATACGCTCGAATGACTCTGGCCCTATCATTCGCTACCAAGATAGGATTCTCAGCCTGATTATTTTGTTGTCTATTTTGCTCCAGCGTCTGGTTTTGCTGCAGCACACGATTCTGCTGGGGATCAACTGGATCTTCTGGACCCTGCGGTAGACGCGGTACGTCAGCCATTTGATTTTGCTGTCTACGCTGCTCTCTCCTTCTTATCCTGAATGTTCTCTCGATTTCTGGATCAAGCTCGAACCTCACCCCAGGCGGATCGGTCATGCACCAAACTCACGCCTGCAAAAACAAAAGAAACAATCAAAAAGTTCTAGCACCAAACCACTAAAAACACATACACAAAACATATCAGATAAAAACTTATTCAAGTTCCCCAACAACGGCGCCAAAAACTTGTTGGGTTCCTAGAGTGAGTGAAAATAAGATGTAAATTGACTCTAGACTCTGTGCAAGTATACACAATCCGCAGCAAGTAATAAGTATTATCAATCCAAGGCCTGAACTAGCTTCCACTTTATCTATTTTGTATAACTCTTTAATGGTTTCAAAGATGGTAAAAAAAATGATTGGTTTTTATAAGAATAATGCTGAAGCAAAAGAAATGACAGAACAGTAAGTAAACAAATAGACAGACAGATTAGAAACAGGCGCTGGTCAGGATTCAGTAATTGTTTTAAAAGATGCTCTAGAAATATTATTGATCAAGCAAAACTCTCGCAGTCTTATTAGCAGATTCCTCCCGGAACTCCAGATCTTTTGGAATGTGTTTCAACCCCAATGAAGTACTACCGATCAAGCACTAGGCAACTGGCTATCCCTAGCTCAGTCACTGGCGTTCACCAATACACAATAATCTAGTGTGATTGACTGCCACACACTCTCTAAATCATCCCTGAAACTAGAGAGAGGTATTCATACCGGCTGGCCAGGCGGGCACAAAATGTAAATGAGCACAACAATTAATCAAGATGCATTAATCAATATTTATTACTAGAAATTAAGCACGGCAATCACATTGTTTCCTAACCAACGCCTAAGCTACTTGGTTCATAAAATGTATGGAAACGCACGTTACAATCTGAGTAAGCATGTCCATAATCACAAGATAATAAAAGAAAATATTAATCTCCCCGATCAGCTTGCAAATGATGGTCTTCTCGATGGTCTCCAATCTCTCTCCTCTATTCGACTTCCAAAAGTGGAAATGAGAGTGAACTTGTCCCCAAAAGTGGAATGAATTTTGACTTGGGTGGCTATCTCCTTTTATAGAGTTGAGGAAAGCTTGAATTAGGTTGACCTAGACACGTGGATGGCTCTCCTTGCTCCTTTATCCCGAGATTAGCTTAACAGAATTCAGTTTGTTAAATTGGCTAACGAGCTGAGACGTGGTAGTTTTTGCTCCCAGCTTTGCTCCAGCACAGAGTTTGCTCCCTCAAGTCGCCCAGCAACATATTCTGCACAAAATAATTTCCAAAGCTTCCATTCTTCCAAATGGGTTAAAACATATAATATACATCTAAAAGCAACCCTATTAAGCATATAAGACACGCGAATCAATATAGAAATAAGGCCTAAATAACTCCCTTTTGGAGAGTTATCACTATGCTATAGACCGTTTTGGGTATTACTTGAACTTGATCCACTTTTATGTTTCCACATATAGTTCAAGTCTACATGTTATAGTCAAGAATTCTTAGTTTATTGGATTTGGGCTATCTAACGTGCAATTTACTTATTATTCAATAATAACTTCATTGAATAAACCTCAATAGCAACTATATTAAAAAATAGAATTTGTTTACAGTTTACAAACTACGAGTTTTAGGGCATAAAACCCAACAGTTTATTTATTGGTTGTTGTTTGGTGGCTCACCAAGTGTGAGCTACATACCTACCGTGGTTGTATTGACCCTTTCCCCTTCGCCCCCAAACCTGCAATTTTGTAGGTGGTTTATGAGTCTGGTGTTGCGATGCAGGAGGCGTTGGGAGAGACCATGTGTTCCTTGATAATTTTGTTTATGTTGAGCTTAGTTTAGTCGATTTTTATTTAGCAAATTTGTGGATGGTCTAGTAGTTGGATTTAGGTTTGTGACCAATCTATTGATTCTTAATTTTGTTAGTCTCTTGTCAGATTTTTATTTACCATTGCGTAAGGTTTAATAAAGTTGAGGTTAATAAACTGGTTTGTTAATGTATCTATTATAGCTATATTCTATTTAAGTTGTATTTAATGGAAGACTTGACTCGCTTTTAAGGGTGATCATCGGTCGGTCGACGTCGGTTTTGGACTCAAACCGACACCGACCACCGACAAGTCGGTTTCCGACGGTCGGTTTTCGTCAGTTTGGGAGGGATTGGTTACGTTGACCGACCGATGACACCGGCGGTCGGTCGATTAGGGTCGGTTTTTAGACTCTGGCGAAGTGAAAGAAGAAGATCTAGAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAGAAGTTTGAATCTGCCCAGAAGAACATAAAAAGAAAAGAGAAGAAGATGAAAGAAAAAACAGAGAAAGAAGGAAATGGCGAAATGAAAATAAAGAAAAGAAAAAAAAAAGAAAGAAAAACCGGAAAAAAGGAAGAAGAAAGGTTTTGAAAAGAAGAAGAAGAAAGAAAGAAAAAAGAAGAAGAAAGGAAGAAATTATGCAAACAAAAAAAAAAGAAAAAAAGAGTTGCAAAGAGTAATAGAGAGAACGAAAGAGAAGCTAAGAGGAAGATGAGAAGGGAAGAAATGGAAATTGAAAGATGAAAGGAAACGGATGGAATGGAAATTTGAAAAAAAATAAATGAATAGTTTTTTTATAAAATAAAACCTTGCGAAGACCATTATAATGCTCTTCCCAAGGTACCAAGGCTGCCAGCATTGATGGCATTATGGCATAGCAGCGTGAATTGGTGTTGTTTACTTTTTTTTTTCTTTGTTAAATCATTCGGTTGGTTTTCACCCTTTTGGGTGAGTCGACCGACCGACATGTCGATTTTACCCCCCGACCGAATCTATAAAAAAAACCGACCGACCGACGTCGGTTCGGTCGGTTTTGGTTGGTCGGCTCGGTTTTTGGGCTTTTTTTGCTCACCCCTACTCACTTTGATTTGTGGAAGTTCGGAGTCTGTTTTGTTGACCTGAGGTGTTGTGGAGTTTGGAGTTGGGTGGTCTTAAATATAAAAGTGTGTTTCTCATGCTTAACAGGTTAAGAAACATTTTAGATTTAGTTATACGTATGTTACTATGCTGTCGAAATTTTTGGAGCATCCGATTAGAGTTAAGATAGAAGTTTAGTAATGTACTCCTTTAAGTAAGGGGCGTTACAAACTTAATGCCTCATTAAATTTTGCTTGCATGGCTTTTACTTTCTTTTTAGTACAACTGCATGTTCATTTAAGGTATGATACTTTGTATTTATTTATCTTGAAATTCTTGAATTCTCTACTCACACTAGTCATTACGCATCTAATTACTTGATCGTGGAAACCACTTCAACGTGATGTGATCTTCCTTATTGATCATTAAACGTTAACATTTTATTTTAGAGAAACAAAATTTCATCCAATTAGGACTAGGAAAAGGGAAAGGCACCACGTGAGCTAAATTTAATGATCTCTTGACTTAAACTGCAAAGACAATCCAGTTAGGAAAATACTCCTTTCAAACGAGGCGCATTTGTGGAGAGTGCAAAAGAACCAAAAGAATAAGCGACTTCATTTCTTTCCCAATTTTCATGAATGGAGGACAAGGACACCAATTTTGCAATGCTCTCCTTGATTGTCGAGACATTAACAGCTTTAGCATTAAGAATGCTATTACAATGTAGGTAAAAATACACTTTTAGTCCTGAGGTTTCGGTTAGGTTTCATTTTGGTTCTTGAGTTTTCAAATTCGACAATTTAGTTCCTAAGGGGCCGTTTGGTAACGTTCTCGTTTCTTGTTTCCGTTTCTTCATTTTTAATAAAGAAAAATAGAATTTCATGACCCTAACATGCCTATACATTCAATAATAATAAACCTATATTCTTATTTATGTTTGGAAAAAATTGGAAACAAGAACAAAAAAGGAGAAACTAGTTTTAGTTGTTCCCAAAAGTTCTATACAAATTTTGGGAGTGTTTCTAAAAAATGAGAAACAAGAAACATACATAGTTATTAAATGCTTAAATTTCTTAATAAAATTAGAAACAAGAAACAAGAAACAAGAAACGAGAACGTTACCAAACGTGTCCTAAGGTTTCGATTTCGTTTCACTTTGGTCCCTCCATCCATTTTTCCGTTAGATTTTAATAGACTGCTTACGTGGCACCTATTTTTTTTATTAAAAAAACATTTTTCATTTTTTAAAATGAAAATTAATAAAATAATAAAAATATTAATTTTTAATATATTTTTAATTCTTTTTTCTGCCGACCGCCGCTACCATTAACTTTTTTTTTTAATTTTCTTCTCCTTTCCTTCTTCTTTTCTTTTTCTGTTTCTTCCTTTCTTTTTTTTAAATAAAAAAGAGGGAAAGGGAGGAGGGAGCTCCCTCCTTCCGTCGCCGGCCCTCCTCCCTCCCCATTTGGATCAGGAATCGGGGAGGAGGAGCCCTTCCATTTAAGAGAAAACCATCATAATCCACCTTTCTCTCTTCTTCCCCACGATTGCAGTCGTTTGAACACCCATCTCCAGTATTTTTTTTGGCCTTCGCTAGGTTTTCTGCACCACCACCATCCAGCAGCAGATCTCGTCGTCTCCGCTCAGCATCTCTGGTGGCGTCTTCGGTTGCAGCGACGTTCGGTTTTGGTAGTGACTAATTGTGGGTTTCAGGCAGCCAGCGGTAAAGCT

mRNA sequence

ATGTTTTGCAAAGTTCATCCATCATGCATGGGAATGACCATTGAAGAAGCAAAGAAGTTGGATCACTTTTTGTGTTCAGATTCGTCTGGTTTTGCTGCAGCACACGATTCTGCTGGGGATCAACTGGATCTTCTGGACCCTGCGGTAGACGCGGTGGTTTATGAGTCTGGTGTTGCGATGCAGGAGGCGTTGGGAGAGACCATTACAACTGCATGTTCATTTAAGGACAAGGACACCAATTTTGCAATGCTCTCCTTGATTGTCGAGACATTAACAGCTTTAGCATTAAGAATGCTATTACAATGTTTTCTGCACCACCACCATCCAGCAGCAGATCTCGTCGTCTCCGCTCAGCATCTCTGGTGGCGTCTTCGGTTGCAGCGACGTTCGGTTTTGGTAGTGACTAATTGTGGGTTTCAGGCAGCCAGCGGTAAAGCT

Coding sequence (CDS)

ATGTTTTGCAAAGTTCATCCATCATGCATGGGAATGACCATTGAAGAAGCAAAGAAGTTGGATCACTTTTTGTGTTCAGATTCGTCTGGTTTTGCTGCAGCACACGATTCTGCTGGGGATCAACTGGATCTTCTGGACCCTGCGGTAGACGCGGTGGTTTATGAGTCTGGTGTTGCGATGCAGGAGGCGTTGGGAGAGACCATTACAACTGCATGTTCATTTAAGGACAAGGACACCAATTTTGCAATGCTCTCCTTGATTGTCGAGACATTAACAGCTTTAGCATTAAGAATGCTATTACAATGTTTTCTGCACCACCACCATCCAGCAGCAGATCTCGTCGTCTCCGCTCAGCATCTCTGGTGGCGTCTTCGGTTGCAGCGACGTTCGGTTTTGGTAGTGACTAATTGTGGGTTTCAGGCAGCCAGCGGTAAAGCT

Protein sequence

MFCKVHPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDLLDPAVDAVVYESGVAMQEALGETITTACSFKDKDTNFAMLSLIVETLTALALRMLLQCFLHHHHPAADLVVSAQHLWWRLRLQRRSVLVVTNCGFQAASGKA

Homology

[Close]

BLAST of Spg032930 vs. NCBI nr
Match: KAF3966881.1 (hypothetical protein CMV_009064 [Castanea mollissima])

HSP 1 Score: 56.2 bits (134), Expect = 2.7e-04
Identity = 31/50 (62.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 6   HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDL--LDPAVDAVV 54
           HPSCMGMTIEEAKKLDHFLCSD S    + D A   L++  L P+V+A V
Sbjct: 164 HPSCMGMTIEEAKKLDHFLCSDCS----SDDDAKRSLNVFPLSPSVEAKV 209

[Close]

BLAST of Spg032930 vs. NCBI nr
Match: XP_030930209.1 (chromatin remodeling protein EBS-like [Quercus lobata])

HSP 1 Score: 55.1 bits (131), Expect = 6.0e-04
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 6   HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDL--LDPAVDAVV 54
           HPSCMGMTIEEAKKLDHFLCSD S    + D A   L++  + P+V+A V
Sbjct: 164 HPSCMGMTIEEAKKLDHFLCSDCS----SDDDAKRSLNVFPVSPSVEAKV 209

[Close]

BLAST of Spg032930 vs. NCBI nr
Match: KAF3960010.1 (hypothetical protein CMV_015239 [Castanea mollissima])

HSP 1 Score: 55.1 bits (131), Expect = 6.0e-04
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 6   HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDL--LDPAVDAVV 54
           HPSCMGMTIEEAKKLDHFLCSD S    + D A   L++  + P+V+A V
Sbjct: 135 HPSCMGMTIEEAKKLDHFLCSDCS----SDDDAKRSLNVFPVSPSVEAKV 180

[Close]

BLAST of Spg032930 vs. NCBI nr
Match: KAA0040219.1 (chromatin remodeling protein EBS-like isoform X1 [Cucumis melo var. makuwa] >TYK07129.1 chromatin remodeling protein EBS-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 54.7 bits (130), Expect = 7.8e-04
Identity = 29/56 (51.79%), Postives = 36/56 (64.29%), Query Frame = 0


Query: 6   HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDLLDPAVDAVVYESGVAMQ 62
           HPSCMGMTIEEAKKLDHFLCSD S    A  S       + P+ +A V++  ++ Q
Sbjct: 164 HPSCMGMTIEEAKKLDHFLCSDCSSENEAKRSL--NAFPVSPSAEAKVFQDHLSSQ 217

[Close]

BLAST of Spg032930 vs. NCBI nr
Match: KAF9862980.1 (hypothetical protein H0E87_013695 [Populus deltoides] >KAF9862981.1 hypothetical protein H0E87_013695 [Populus deltoides] >KAF9863210.1 hypothetical protein H0E87_013850 [Populus deltoides])

HSP 1 Score: 54.7 bits (130), Expect = 7.8e-04
Identity = 29/48 (60.42%), Postives = 34/48 (70.83%), Query Frame = 0


Query: 6   HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDLLDPAVDAVV 54
           HPSCMGMTIEEAKKLDHFLCSD S    A  S    + L+ P+++A V
Sbjct: 164 HPSCMGMTIEEAKKLDHFLCSDCSSEDDAKRSM--NVFLVSPSLEAKV 209

[Close]

BLAST of Spg032930 vs. ExPASy Swiss-Prot
Match: F4JL28 (Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.6e-04
Identity = 18/24 (75.00%), Postives = 23/24 (95.83%), Query Frame = 0


Query: 6   HPSCMGMTIEEAKKLDHFLCSDSS 30
           HP+C+GMTIEEAKKLDHF+C++ S
Sbjct: 172 HPACVGMTIEEAKKLDHFVCAECS 195

[Close]

BLAST of Spg032930 vs. ExPASy TrEMBL
Match: A0A5D3C9X7 (Chromatin remodeling protein EBS-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004500 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.8e-04
Identity = 29/56 (51.79%), Postives = 36/56 (64.29%), Query Frame = 0


Query: 6   HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDLLDPAVDAVVYESGVAMQ 62
           HPSCMGMTIEEAKKLDHFLCSD S    A  S       + P+ +A V++  ++ Q
Sbjct: 164 HPSCMGMTIEEAKKLDHFLCSDCSSENEAKRSL--NAFPVSPSAEAKVFQDHLSSQ 217

[Close]

BLAST of Spg032930 vs. ExPASy TrEMBL
Match: B9SH49 (Phd finger transcription factor, putative OS=Ricinus communis OX=3988 GN=RCOM_1116610 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.0e-04
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 6   HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDL--LDPAVDAVV 54
           HPSCMGMTIEEAKKLDHFLCSD S    + D A   L+   + P+V+A V
Sbjct: 164 HPSCMGMTIEEAKKLDHFLCSDCS----SDDDAKRSLNAFPVSPSVEAKV 209

[Close]

BLAST of Spg032930 vs. ExPASy TrEMBL
Match: A0A6A6KVU1 (PHD-type domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_018689 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.0e-04
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 6   HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDSAGDQLDL--LDPAVDAVV 54
           HPSCMGMTIEEAKKLDHFLCSD S    + D A   L+   + P+V+A V
Sbjct: 128 HPSCMGMTIEEAKKLDHFLCSDCS----SDDDAKRSLNAFPVSPSVEAKV 173

[Close]

BLAST of Spg032930 vs. ExPASy TrEMBL
Match: A0A068UUN1 (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00033514001 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 6.5e-04
Identity = 23/24 (95.83%), Postives = 23/24 (95.83%), Query Frame = 0


Query: 6   HPSCMGMTIEEAKKLDHFLCSDSS 30
           HPSCMGMTIEEAKKLDHFLCSD S
Sbjct: 164 HPSCMGMTIEEAKKLDHFLCSDCS 187

[Close]

BLAST of Spg032930 vs. ExPASy TrEMBL
Match: A0A5A7UF44 (Protein mlo2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold773G00220 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 6.5e-04
Identity = 25/32 (78.12%), Postives = 26/32 (81.25%), Query Frame = 0


Query: 6  HPSCMGMTIEEAKKLDHFLCSDSSGFAAAHDS 38
          HPSCMGMTIEEAKKLDHFLCSD S    A+ S
Sbjct: 41 HPSCMGMTIEEAKKLDHFLCSDCSSKNEANRS 72

[Close]

BLAST of Spg032930 vs. TAIR 10
Match: AT4G22140.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.2e-05
Identity = 18/24 (75.00%), Postives = 23/24 (95.83%), Query Frame = 0


Query: 6   HPSCMGMTIEEAKKLDHFLCSDSS 30
           HP+C+GMTIEEAKKLDHF+C++ S
Sbjct: 172 HPACVGMTIEEAKKLDHFVCAECS 195

[Close]

BLAST of Spg032930 vs. TAIR 10
Match: AT4G22140.2 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.2e-05
Identity = 18/24 (75.00%), Postives = 23/24 (95.83%), Query Frame = 0


Query: 6   HPSCMGMTIEEAKKLDHFLCSDSS 30
           HP+C+GMTIEEAKKLDHF+C++ S
Sbjct: 172 HPACVGMTIEEAKKLDHFVCAECS 195

[Close]

BLAST of Spg032930 vs. TAIR 10
Match: AT4G04260.1 (Bromo-adjacent homology (BAH) domain-containing protein )

HSP 1 Score: 41.6 bits (96), Expect = 6.4e-04
Identity = 16/26 (61.54%), Postives = 23/26 (88.46%), Query Frame = 0


Query: 4   KVHPSCMGMTIEEAKKLDHFLCSDSS 30
           +VH +C+G+TIEEAKKL+HF+C + S
Sbjct: 131 RVHLACVGVTIEEAKKLEHFVCVECS 156

The following BLAST results are available for this feature:

BLAST of Spg032930 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF3966881.1	2.7e-04	62.00	hypothetical protein CMV_009064 [Castanea mollissima]	[more]
XP_030930209.1	6.0e-04	60.00	chromatin remodeling protein EBS-like [Quercus lobata]	[more]
KAF3960010.1	6.0e-04	60.00	hypothetical protein CMV_015239 [Castanea mollissima]	[more]
KAA0040219.1	7.8e-04	51.79	chromatin remodeling protein EBS-like isoform X1 [Cucumis melo var. makuwa] >TYK...	[more]
KAF9862980.1	7.8e-04	60.42	hypothetical protein H0E87_013695 [Populus deltoides] >KAF9862981.1 hypothetical...	[more]

BLAST of Spg032930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JL28	1.6e-04	75.00	Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=...	[more]

BLAST of Spg032930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C9X7	3.8e-04	51.79	Chromatin remodeling protein EBS-like isoform X1 OS=Cucumis melo var. makuwa OX=...	[more]
B9SH49	5.0e-04	60.00	Phd finger transcription factor, putative OS=Ricinus communis OX=3988 GN=RCOM_11...	[more]
A0A6A6KVU1	5.0e-04	60.00	PHD-type domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_018689...	[more]
A0A068UUN1	6.5e-04	95.83	Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00033514001 PE=4 ...	[more]
A0A5A7UF44	6.5e-04	78.13	Protein mlo2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]

BLAST of Spg032930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G22140.1	1.2e-05	75.00	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G22140.2	1.2e-05	75.00	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G04260.1	6.4e-04	61.54	Bromo-adjacent homology (BAH) domain-containing protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg032930.1	Spg032930.1	mRNA