Spg032863 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg032863
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold11: 14725873 .. 14728784 (+)
RNA-Seq Expression	Spg032863
Synteny	Spg032863

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATTATGAGCCCGATGGGGGCAACGCGTCGAGCCGCTCAGACGGGTAGTCAACCCCGGGAGCTGACGATTGCAAAGTTCGGTTGTTTGGATATACGAACGGTTTCCATCCTGTGGTTTCAACACAAGGGGTTCGGCCGCGTGGTTGGATTTTTCCCCATTCAGGGAATTCTGACCGTTTGGACTAAATTAAATTTGAAGTTCCGCTCCATTGTATTAAATCGAAGAAAACCAACCATACTCCTGTATTCCCACTCATCACTCAGTGTGAAGAAACGCGATTTCTACTGTCTGTTTGGCCTTGAACGAACACAATCCGAACGACTCGGGAAGGATAACGCAGAACGCAATCGACTGTTCATCAGATCCTGGTAAGCATTCACTGACCAATATTCTAGTTTACTTTCTTTGTGTCAAAAAAATGTGTATTCGATCGAAATGAATTTAGGGTTACCGTTGTTCATTATCTCGGATTGGATGTGTGGGGTGGGGGGGTCAGACGATCGAGATATCTAATGATAGGTGAGATAACCGTAGGAAAGGGGAAAGGGGGGACATTATATACAAGAAATTTCTAGTTTTGATTGCATTGTCGTTCACTCTAGTCGTATTCGGATAGTCGCTACGTTCCGTCGTCAGTTAGGTAGAATTGTGCAAATGTTTTATATGTGCGCGACTTTAGGTATAGTTGTAAGCCAGAATTGTAAGCCCGAATGGTTGTGTATAGTTGTAAGCCAGAATGGTTGGGTATATAGGTAGAATTGTTGGGCATAATTGGAAGCCCGAATAGCTGGGTATAGTTGTAAGCCCCAATTGTTGGATTCTTATTATCATGTCGAACTCAACAGGATGATGGCACCCACATGGAAGATTAAACCCACTGATCGCTTCCCCAGTCAAGATACGTGCCTGTCTCACATAAGAAGTGTCGACCAGGCCATGAAAAGCAAGCTGATTGCAACTCAATTGGAGTCGTTCAAAACTGGTACTATATTCGGCCACCTACTTGATGTTGATCTCGTCTTCAATAGTCAGGTCACCCATCACATATTGCTGAGGGAGGTAGACGACGATAGACATGCAGTAATGAGCTTCAATCTGAGGGGCACGTTTGTGTCGTTTTCGAAGGAGGAATTCATGTTGATGACTGGGCTGTGGGGGAGTGGGAGTGGTGAATCAACTGTAGGTGATATGCAGAAAGGTGAATCCACTGTGGACCTGCGGGCCAAATACTTTGGATCGTGCCCGACTGACATGAGCCTTTCCACCTTCGAGAAGGAGTATACAGACAATGTGGTATTCGACAATGACGAGGATGCAATTAAGGTGTCATTGGTGTACTACACGAAGTTGGCGATGTTGGGAAAAGACAAACAGAAGACATCGATCGACGAATCGTTGTTCTGGGAAGTGGAGGATTTGGCACACTTCAACAGCATTGATTAGGGTACCAGAATATGGGAGAGGACGATCAAGGGCTTGCAAAATGCCCTAAAGGATAGAGAGGACGCTTTTAAGAAGAAGGCGATAGAGAAGAGTGACCACAAAGTGAAGTACAGTCTGAGTGGCTTTCCCCATGCTTTTCAGGTAAAAGTATGATCCCACGATTAAAGTGGTGGACAAAATTCAGTTTCCTTATTTTTACTCCTTCGTATAGGTATGGGCGTACAAGACCATGTCCACTATGGAGGGGAAGTTCACGGATAGAGTGAGGCGCGATGCGATCCCCCGCATCCTTAGATTTAAATGCAGACATGCTGCAAGCTACAAAGCTTTGGAGAAAGGCATATTCGAGTATCCGAAGGTAATTCTGTGTCGACTCGCACGTGTTGAAGGGCTTCCAGGGGGAAGCAGAAATTGGAGTGGTGACCATGCATGCTGACTTTGTTGTACCGGACATACAGCCCGACGCAGACACTAGTGCCGATACCCTGGATGTCCACCCGCGCGAACAGGACATTCAGCTCGAAATGGAGACTGGTAGGTTGACCATGGATGTCGCCTCCGCAGACCGGACATCCAACCCAAAATGGAGACTGGTGAGTTGACCATGGATGTCGCCATGCGCCGACCGAAACATCCAGCCTGAAACGGAGACTGGCATGGTGACCACGCATGCCAACTCGCACGGACAGGACATCCAGTTCGAATCAATTACTGGTGTGGAGACTAGTGAGGTCGACTGGCGCAGACAGGAAGAACCCGCCATTGCGGACCAACCATCTACGGAGATGGAACTGACTTCAACCGATCCAATCGTGTCTTCCACGTGCCCCAGCCACATGGAAATGTATGAAACGTCCATTCTGATGGACAGTAATCCAGCTCAGCTGCCGCACTCTCAGCCACTCCAGGCGATCACCAGTGACACGATTCGGATAGACAACCTAATTGGAACAACACAATCCACAGTCCGTATAGTTAGGGCGTATGTGGAATATTTATTGTGTCGAGTTTGAATTTTAATAAGTTTGACTTCTTATTTGCAGAGTTTGCCCGCTGAACGAGTCACTCGACGGAGGATCGGTCGGAAGAGGGTTGCAAAGCAGCCGTATACTCCCCCACGACGGGGGAAAAAGAGGAAAAATGAAGACTCCAGCGTTCGGTATGATTGGGAACCTGTTTTGAAAATCGAAGACCGCATGTATCCTGTGCCAGGTGTGCCCTTTGATGGGGATCTGTCGTCGGCTGTCAGATATTCTTCGCTCCGCAGCATCCCGGCTGCACTGTTCGAGGAGTTTCACCAATGGCTCTCAAATCCAATCAACGAAGATGACACGCGGTCATCGTTCGTGTCACACGAGGTTGCTACTGAGAAGCGGGCCAGGCTCGATAAAAAGTACTTCCTCAATTTTGCACTCCCAAGTGAGTGGATACTCCATGACGTACGTTTCTTGTACTCGTTGTAG

mRNA sequence

ATGTCCACTATGGAGGGGAAGTTCACGGATAGAGTGAGGCGCGATGCGATCCCCCGCATCCTTAGATTTAAATGCAGACATGCTGCAAGCTACAAAGCTTTGGAGAAAGGCATATTCGAGTATCCGAAGCCCGACGCAGACACTAGTGCCGATACCCTGGATGTCCACCCGCGCGAACAGGACATTCAGCTCGAAATGGAGACTGGTAGGTTGACCATGGATGTCGCCTCCGCAGACCGGACATCCAACCCAAAATGGAGACTGGACATCCAGTTCGAATCAATTACTGGTGTGGAGACTAGTGAGGTCGACTGGCGCAGACAGGAAGAACCCGCCATTGCGGACCAACCATCTACGGAGATGGAACTGACTTCAACCGATCCAATCGTGTCTTCCACGTGCCCCAGCCACATGGAAATGTATGAAACGTCCATTCTGATGGACAGTAATCCAGCTCAGCTGCCGCACTCTCAGCCACTCCAGGCGATCACCAGTGACACGATTCGGATAGACAACCTAATTGGAACAACACAATCCACAAGTTTGCCCGCTGAACGAGTCACTCGACGGAGGATCGGTCGGAAGAGGGTTGCAAAGCAGCCGTATACTCCCCCACGACGGGGGAAAAAGAGGAAAAATGAAGACTCCAGCGTTCGGTATGATTGGGAACCTGTTTTGAAAATCGAAGACCGCATGTATCCTGTGCCAGGTGTGCCCTTTGATGGGGATCTGTCGTCGGCTGTCAGATATTCTTCGCTCCGCAGCATCCCGGCTGCACTGTTCGAGGAGTTTCACCAATGGCTCTCAAATCCAATCAACGAAGATGACACGCGGTCATCGTTCGTGTCACACGAGGTTGCTACTGAGAAGCGGGCCAGGCTCGATAAAAAGTACTTCCTCAATTTTGCACTCCCAAGTGAGTGGATACTCCATGACGTACGTTTCTTGTACTCGTTGTAG

Coding sequence (CDS)

ATGTCCACTATGGAGGGGAAGTTCACGGATAGAGTGAGGCGCGATGCGATCCCCCGCATCCTTAGATTTAAATGCAGACATGCTGCAAGCTACAAAGCTTTGGAGAAAGGCATATTCGAGTATCCGAAGCCCGACGCAGACACTAGTGCCGATACCCTGGATGTCCACCCGCGCGAACAGGACATTCAGCTCGAAATGGAGACTGGTAGGTTGACCATGGATGTCGCCTCCGCAGACCGGACATCCAACCCAAAATGGAGACTGGACATCCAGTTCGAATCAATTACTGGTGTGGAGACTAGTGAGGTCGACTGGCGCAGACAGGAAGAACCCGCCATTGCGGACCAACCATCTACGGAGATGGAACTGACTTCAACCGATCCAATCGTGTCTTCCACGTGCCCCAGCCACATGGAAATGTATGAAACGTCCATTCTGATGGACAGTAATCCAGCTCAGCTGCCGCACTCTCAGCCACTCCAGGCGATCACCAGTGACACGATTCGGATAGACAACCTAATTGGAACAACACAATCCACAAGTTTGCCCGCTGAACGAGTCACTCGACGGAGGATCGGTCGGAAGAGGGTTGCAAAGCAGCCGTATACTCCCCCACGACGGGGGAAAAAGAGGAAAAATGAAGACTCCAGCGTTCGGTATGATTGGGAACCTGTTTTGAAAATCGAAGACCGCATGTATCCTGTGCCAGGTGTGCCCTTTGATGGGGATCTGTCGTCGGCTGTCAGATATTCTTCGCTCCGCAGCATCCCGGCTGCACTGTTCGAGGAGTTTCACCAATGGCTCTCAAATCCAATCAACGAAGATGACACGCGGTCATCGTTCGTGTCACACGAGGTTGCTACTGAGAAGCGGGCCAGGCTCGATAAAAAGTACTTCCTCAATTTTGCACTCCCAAGTGAGTGGATACTCCATGACGTACGTTTCTTGTACTCGTTGTAG

Protein sequence

MSTMEGKFTDRVRRDAIPRILRFKCRHAASYKALEKGIFEYPKPDADTSADTLDVHPREQDIQLEMETGRLTMDVASADRTSNPKWRLDIQFESITGVETSEVDWRRQEEPAIADQPSTEMELTSTDPIVSSTCPSHMEMYETSILMDSNPAQLPHSQPLQAITSDTIRIDNLIGTTQSTSLPAERVTRRRIGRKRVAKQPYTPPRRGKKRKNEDSSVRYDWEPVLKIEDRMYPVPGVPFDGDLSSAVRYSSLRSIPAALFEEFHQWLSNPINEDDTRSSFVSHEVATEKRARLDKKYFLNFALPSEWILHDVRFLYSL

Homology

The following BLAST results are available for this feature:

BLAST of Spg032863 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032863 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032863 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032863 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg032863.1	Spg032863.1	mRNA