Spg032862 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg032862
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold11: 15839182 .. 15841442 (-)
RNA-Seq Expression	Spg032862
Synteny	Spg032862

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGCCCAAAGGCGTAAGGCACTTGAAGAAGAAGCTCAATTGCGTGATGCTGAAGAATCCGCCAAAGTGGGAGAAAGCTCTCGACAAGGAGAGACTCAAAAGGGTAAGGCCTCCAAACCTTCTACTAATCCAACTTCTTCTTGCAGGAACAAGCCGTTTGTGACTTACAATGCAAGGAAGAAGGATTCCAAGAAGGTTGAACCCAAAAAACCTCTGATCATTGAGCCCCTTAAAGTAGCTAGAATGTCGTCGGATGTGTTCGAAGAGATGATCCGACAGGCCGTTGCACAAGCCCTCATTATTGTCGAAGGATATAGGACTGAGCAAGATGCACTCGGGGAAATAAGGGCTGAAAAAGAGATGGAAAATTAGAGCATGAGGGAAGAAGATGAGTTTGCGAGAAAAAAAGACTTAGAAGAGGAAAGGGAAGCTGAGAAAAAGAAAGAAGATGAAAGAAGAAGAAAGACAAGAGGCCGAGAGGCCGAGAGGGCCATTCAAGCTGAAAAAGAGAGAAAATAAGACGAAGAACTTAGGAGGGTGGTTGTTGAACTCCACCTCCTGGAGAAAGAAAAAGAAAGAAGAGAAAATTTGAGAGAAGAAGAAGCAAGAAGAAAAGAGGTTGAAGATTTTCTTACAGTGAGACTGCACAGTTGCAAGAACTTGAAGAAGCCACTACACAAGGCTCAAAGTGAGGTTGCACAGTTCCAAGAAGTTGAAGAAGAGGCCCTTGAAGGGCCAAGTGAAGAAAAGACAGAAAAAGAAAAAGCGGAAGAAACCAAAGGCCAGAATGCGACCGCATTTAGGTTGCATTCTGAGGAAGGCCAAGAAAAGGCCACTGAAGAGAACCAGGCTGATGAGGCCCTTGATCCAATGTTCGAATATGATATCAGGGGACCTCCACCAACTGCTGATAGCACCTTTTCAGGAGAGAAGAAAGATGAAGAGGAAATTGAAAAAGAAGAGGTCGAGACCTCTAGCGATAGTGAAACCGAATCAGATTCTGAGATCAAGGAATTGGATGATGACCAAATTTCTATCTCTGCAGCTTTGAGGAAGAAAAGAAGAAGAGAATTGAGGGCCGAGAGGAGAACAAAGAATAAAAATGACCCTATTTTTACCAAGAGGCCGAGGACAAGGTCCATGGACGCCTCTCCTACAGCTCCTCGTACCTCCACACCTGTCAAACCGAAGACCAAATCGCCTAAAGCTCCCTCACCAAAGAATCTGTTTCCTGAAGTCTTCAAGGATGTTAACTTCCAAGAGAAGATGGAGATTATGAGAAAAAGGGACTTCCTCAACGAGAAGAGATTCTCAAACAGAGCAGGGACTTCGCCAGACTTCGTGACCGAAGTCATCACTAAGTACAAATGGTAGGAGTTCTGTGCTCACCCTCAGGAGGTCGTGGTGCCTCTAGTTCGAGAGTTCTATGCTTGTTGGAGGGAAGAGAGCATGAGCATGGCGATGGTAAGAGGTAAGATGGTTAGTTTTTCTTTAGTTGACATCAATAGGGTGTACCGGATCAAAGCACCCTTGCATCCAAGAGGGAATGAAGCGATTAAGAACCCCTCGGCCAAACAGATTAAAGAAGCATTGAAAATGGTGGCCAACAAGGGAGTTCAATGGAAGGAGTCTCAAACAAAGGTGAAACATTAGTGCCCAGTGATCTCAAGCCAGAATTGACAGTGTGGCTTCACATTATCAAGAACAAACTGATGCCCACAACCCACGACAGTACAATTTCAGTAGAGAGGGTTATGCTTTTCTACAGCATCATGAAGGGGTTGGAGATAAATATAGGGAGTATCATCAGAGAAGAGATCCTTTCATGTGGAAGGAAGAGAGCGGGGAAGTTGTTCTTTGGGTCACTCATAACCCAATTGTGTTAGAGGATGAAGATAGTCCCTGGAAAAGATGAGGAGCGTCACTTTTTCAGGCCCACCATTAACTTACCTCTGATTGGGAAGCTTCAACGGAACAACGCCCAAAGAAAGGACAAGGCTTCCACTTCCCAAGCTACTCCACCACCAGGGTTGACACCTACTTCACCTCCTCAGCACACTCCTATTTTAGGGCCTACCCCATCATCAGAGGCCCTTGCATTCTTCTTCCGACAGCTAGACCGGATTGAAGACAAGCTGAAAGCTTACTGGGTCTATGCTAAGGAGAAAGATGAAGCTATTAGAGAGTTCTACCTCTCTATCGCCCCTAGCATCGCCCTTGTGTTTCTTGACTTCCCTCAATCGTTGCTGCCTCAATAA

mRNA sequence

ATGGGAGCCCAAAGGCGTAAGGCACTTGAAGAAGAAGCTCAATTGCGTGATGCTGAAGAATCCGCCAAAGTGGGAGAAAGCTCTCGACAAGGAGAGACTCAAAAGGGTAAGGCCTCCAAACCTTCTACTAATCCAACTTCTTCTTGCAGGAACAAGCCGTTTGTGACTTACAATGCAAGGAAGAAGGATTCCAAGAAGGTTGAACCCAAAAAACCTCTGATCATTGAGCCCCTTAAAGTAGCTAGAATGTCGTCGGATGTGTTCGAAGAGATGATCCGACAGGCCAACTTGAAGAAGCCACTACACAAGGCTCAAAGTGAGGTTGCACAGTTCCAAGAAGTTGAAGAAGAGGCCCTTGAAGGGCCAAGTGAAGAAAAGACAGAAAAAGAAAAAGCGGAAGAAACCAAAGGCCAGAATGCGACCGCATTTAGGTTGCATTCTGAGGAAGGCCAAGAAAAGGCCACTGAAGAGAACCAGGCTGATGAGGCCCTTGATCCAATGTTCGAATATGATATCAGGGGACCTCCACCAACTGCTGATAGCACCTTTTCAGGAGAGAAGAAAGATGAAGAGGAAATTGAAAAAGAAGAGGTCGAGACCTCTAGCGATAGTGAAACCGAATCAGATTCTGAGATCAAGGAATTGGATGATGACCAAATTTCTATCTCTGCAGCTTTGAGGAAGAAAAGAAGAAGAGAATTGAGGGCCGAGAGGAGAACAAAGAATAAAAATGACCCTATTTTTACCAAGAGGCCGAGGACAAGGTCCATGGACGCCTCTCCTACAGCTCCTCGTACCTCCACACCTGTCAAACCGAAGACCAAATCGCCTAAAGCTCCCTCACCAAAGAATCTGTTTCCTGAAGTCTTCAAGGATGTTAACTTCCAAGAGAAGATGGAGATTATGAGAAAAAGGGACTTCCTCAACGAGAAGAGATTCTCAAACAGAGCAGGGACTTCGCCAGACTTCGTGACCGAAGTCATCACTAAGTACAAATGGGTGTACCGGATCAAAGCACCCTTGCATCCAAGAGGGAATGAAGCGATTAAGAACCCCTCGGCCAAACAGATTAAAGAAGCATTGAAAATGGTGGCCAACAAGGGAGTTCAATGGAAGGAGTCTCAAACAAAGAGGATGAAGATAGTCCCTGGAAAAGATGAGGAGCGTCACTTTTTCAGGCCCACCATTAACTTACCTCTGATTGGGAAGCTTCAACGGAACAACGCCCAAAGAAAGGACAAGGCTTCCACTTCCCAAGCTACTCCACCACCAGGGTTGACACCTACTTCACCTCCTCAGCACACTCCTATTTTAGGGCCTACCCCATCATCAGAGGCCCTTGCATTCTTCTTCCGACAGCTAGACCGGATTGAAGACAAGCTGAAAGCTTACTGGGTCTATGCTAAGGAGAAAGATGAAGCTATTAGAGAGTTCTACCTCTCTATCGCCCCTAGCATCGCCCTTGTGTTTCTTGACTTCCCTCAATCGTTGCTGCCTCAATAA

Coding sequence (CDS)

ATGGGAGCCCAAAGGCGTAAGGCACTTGAAGAAGAAGCTCAATTGCGTGATGCTGAAGAATCCGCCAAAGTGGGAGAAAGCTCTCGACAAGGAGAGACTCAAAAGGGTAAGGCCTCCAAACCTTCTACTAATCCAACTTCTTCTTGCAGGAACAAGCCGTTTGTGACTTACAATGCAAGGAAGAAGGATTCCAAGAAGGTTGAACCCAAAAAACCTCTGATCATTGAGCCCCTTAAAGTAGCTAGAATGTCGTCGGATGTGTTCGAAGAGATGATCCGACAGGCCAACTTGAAGAAGCCACTACACAAGGCTCAAAGTGAGGTTGCACAGTTCCAAGAAGTTGAAGAAGAGGCCCTTGAAGGGCCAAGTGAAGAAAAGACAGAAAAAGAAAAAGCGGAAGAAACCAAAGGCCAGAATGCGACCGCATTTAGGTTGCATTCTGAGGAAGGCCAAGAAAAGGCCACTGAAGAGAACCAGGCTGATGAGGCCCTTGATCCAATGTTCGAATATGATATCAGGGGACCTCCACCAACTGCTGATAGCACCTTTTCAGGAGAGAAGAAAGATGAAGAGGAAATTGAAAAAGAAGAGGTCGAGACCTCTAGCGATAGTGAAACCGAATCAGATTCTGAGATCAAGGAATTGGATGATGACCAAATTTCTATCTCTGCAGCTTTGAGGAAGAAAAGAAGAAGAGAATTGAGGGCCGAGAGGAGAACAAAGAATAAAAATGACCCTATTTTTACCAAGAGGCCGAGGACAAGGTCCATGGACGCCTCTCCTACAGCTCCTCGTACCTCCACACCTGTCAAACCGAAGACCAAATCGCCTAAAGCTCCCTCACCAAAGAATCTGTTTCCTGAAGTCTTCAAGGATGTTAACTTCCAAGAGAAGATGGAGATTATGAGAAAAAGGGACTTCCTCAACGAGAAGAGATTCTCAAACAGAGCAGGGACTTCGCCAGACTTCGTGACCGAAGTCATCACTAAGTACAAATGGGTGTACCGGATCAAAGCACCCTTGCATCCAAGAGGGAATGAAGCGATTAAGAACCCCTCGGCCAAACAGATTAAAGAAGCATTGAAAATGGTGGCCAACAAGGGAGTTCAATGGAAGGAGTCTCAAACAAAGAGGATGAAGATAGTCCCTGGAAAAGATGAGGAGCGTCACTTTTTCAGGCCCACCATTAACTTACCTCTGATTGGGAAGCTTCAACGGAACAACGCCCAAAGAAAGGACAAGGCTTCCACTTCCCAAGCTACTCCACCACCAGGGTTGACACCTACTTCACCTCCTCAGCACACTCCTATTTTAGGGCCTACCCCATCATCAGAGGCCCTTGCATTCTTCTTCCGACAGCTAGACCGGATTGAAGACAAGCTGAAAGCTTACTGGGTCTATGCTAAGGAGAAAGATGAAGCTATTAGAGAGTTCTACCTCTCTATCGCCCCTAGCATCGCCCTTGTGTTTCTTGACTTCCCTCAATCGTTGCTGCCTCAATAA

Protein sequence

MGAQRRKALEEEAQLRDAEESAKVGESSRQGETQKGKASKPSTNPTSSCRNKPFVTYNARKKDSKKVEPKKPLIIEPLKVARMSSDVFEEMIRQANLKKPLHKAQSEVAQFQEVEEEALEGPSEEKTEKEKAEETKGQNATAFRLHSEEGQEKATEENQADEALDPMFEYDIRGPPPTADSTFSGEKKDEEEIEKEEVETSSDSETESDSEIKELDDDQISISAALRKKRRRELRAERRTKNKNDPIFTKRPRTRSMDASPTAPRTSTPVKPKTKSPKAPSPKNLFPEVFKDVNFQEKMEIMRKRDFLNEKRFSNRAGTSPDFVTEVITKYKWVYRIKAPLHPRGNEAIKNPSAKQIKEALKMVANKGVQWKESQTKRMKIVPGKDEERHFFRPTINLPLIGKLQRNNAQRKDKASTSQATPPPGLTPTSPPQHTPILGPTPSSEALAFFFRQLDRIEDKLKAYWVYAKEKDEAIREFYLSIAPSIALVFLDFPQSLLPQ

Homology

The following BLAST results are available for this feature:

BLAST of Spg032862 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032862 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032862 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032862 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..285
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..214
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 424..438
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 407..439
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg032862.1	Spg032862.1	mRNA