Spg032832 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg032832
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Plant transposase
Location	scaffold11: 14238114 .. 14239358 (+)
RNA-Seq Expression	Spg032832
Synteny	Spg032832

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCATGACCACCAATTAGAAAAGGTAGTGGTCCATAGTGGTAACCCCAATCAGGATAGGTTGCCTCTTCCAAACGATGTCAATGAAGGAAGATCTCCTATTAGTGCCCACCCTCAACATGTCTCATCGAATCCTAATGAGAAGACAATTGGGCATAATCCTACTTCAATTCCTACATTAGACTCACCAGCAACTCGAACAAGATTAGCACTTCGTAGGCAAGTAGGAACTTCTAATGAAAATAGGCTTGAAAATGAAGATCATATAAATAGTGAGTATCCACTTGAAACAACAACTTTGCCAAAACGAACAAGAGGTCCTACTAAGATGAAGGCAATTGCCGTTGATAAAGAATCTAGAGTGAACATACTTTTTAATGAATATGGACAACCAATTGGGGAGACATCTGTAGGATTAGCTTCATTTCTTGGTCCACTCGTGAGGGAGGTTGTGCCCGTTAATTTAGAGAATTGGAAAAAATTACCTACAAGGTTGAAAATAGTGTTATGGAGGTCTATTCAGGTATGAAATTACTTTATTCCATTTATATACTTCCAATTAAATGTATGTATCATTTTTCCCTAAATGATTCATTATGATTTATTTCTAACCATGTGATGCTTTAGTCGAGGTATAATGTAAATGACGATTGGCAAAAACAATACCTTTTCCAAAAGATGGGTAGGTTATGGAGGGTTGGAAAATCTCGTCTGGTAAACAAAATTCGCAAGGCCCCAACAAAGGATGCACTTTTGAAACTTATGCCAGATAATTTTCAAACTACCGATGATTGGATGGATTTTGTCAATGAAAAGACTAGTGCAAACTTTGTGGTATAAAAACTTTTACCTAAGTTTAACTAAAATTTTTATACTATTACTTTGATATAAATATTAGACATATCTTTGTTTTTGTAGGTAAAAAGTGAGAAATATAAAGCCATGAAGAAGAAACAACTACCACATACATGTAGTAGAAAGGGGTATGTTGGTTTGGCTGAAGAGATGGTAAAAATCATTATTACTTAGTTTAATTATTCTACTTTCATTATTGTTTGTGAGTTTCATTTTTCTTTATTTCCTTTGATAGAAAAAAAGCTCCTCAGATCCAACTTCAATCACGAGGGTTATGTTGTGGACAAAGGCACACAAAAAGAAAGATGGGCAACTAGTGAATGCCAAAGTTGCTGAGCCACTCGTAAGACATTTATTTTATTGTCTTGGAGGGAAAGCCTACAAATAA

mRNA sequence

ATGATGCATGACCACCAATTAGAAAAGGTAGTGGTCCATAGTGGTAACCCCAATCAGGATAGGTTGCCTCTTCCAAACGATGTCAATGAAGGAAGATCTCCTATTAGTGCCCACCCTCAACATGTCTCATCGAATCCTAATGAGAAGACAATTGGGCATAATCCTACTTCAATTCCTACATTAGACTCACCAGCAACTCGAACAAGATTAGCACTTCGTAGGCAATCGAGGTATAATGTAAATGACGATTGGCAAAAACAATACCTTTTCCAAAAGATGGGTAGGTTATGGAGGGTTGGAAAATCTCGTCTGGTAAACAAAATTCGCAAGGCCCCAACAAAGGATGCACTTTTGAAACTTATGCCAGATAATTTTCAAACTACCGATGATTGGATGGATTTTGTCAATGAAAAGACTAGTGCAAACTTTGTGAAAAAAAGCTCCTCAGATCCAACTTCAATCACGAGGGTTATGTTGTGGACAAAGGCACACAAAAAGAAAGATGGGCAACTAGTGAATGCCAAAGTTGCTGAGCCACTCGTAAGACATTTATTTTATTGTCTTGGAGGGAAAGCCTACAAATAA

Coding sequence (CDS)

ATGATGCATGACCACCAATTAGAAAAGGTAGTGGTCCATAGTGGTAACCCCAATCAGGATAGGTTGCCTCTTCCAAACGATGTCAATGAAGGAAGATCTCCTATTAGTGCCCACCCTCAACATGTCTCATCGAATCCTAATGAGAAGACAATTGGGCATAATCCTACTTCAATTCCTACATTAGACTCACCAGCAACTCGAACAAGATTAGCACTTCGTAGGCAATCGAGGTATAATGTAAATGACGATTGGCAAAAACAATACCTTTTCCAAAAGATGGGTAGGTTATGGAGGGTTGGAAAATCTCGTCTGGTAAACAAAATTCGCAAGGCCCCAACAAAGGATGCACTTTTGAAACTTATGCCAGATAATTTTCAAACTACCGATGATTGGATGGATTTTGTCAATGAAAAGACTAGTGCAAACTTTGTGAAAAAAAGCTCCTCAGATCCAACTTCAATCACGAGGGTTATGTTGTGGACAAAGGCACACAAAAAGAAAGATGGGCAACTAGTGAATGCCAAAGTTGCTGAGCCACTCGTAAGACATTTATTTTATTGTCTTGGAGGGAAAGCCTACAAATAA

Protein sequence

MMHDHQLEKVVVHSGNPNQDRLPLPNDVNEGRSPISAHPQHVSSNPNEKTIGHNPTSIPTLDSPATRTRLALRRQSRYNVNDDWQKQYLFQKMGRLWRVGKSRLVNKIRKAPTKDALLKLMPDNFQTTDDWMDFVNEKTSANFVKKSSSDPTSITRVMLWTKAHKKKDGQLVNAKVAEPLVRHLFYCLGGKAYK

Homology

[Close]

BLAST of Spg032832 vs. NCBI nr
Match: KAA0041468.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 166.0 bits (419), Expect = 3.2e-37
Identity = 80/112 (71.43%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 69  RLALRRQSRYNVNDDWQKQYLFQKMGRLWRVGKSRLVNKIRKAPTKDALLKLMPDNFQTT 128
           +L  R +SRYNV +DWQ ++ FQKMGRLWR GKSRLV +IR APTKDA+LKLMPDN Q+ 
Sbjct: 147 KLPTRLKSRYNV-EDWQNKFFFQKMGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSV 206

Query: 129 DDWMDFVNEKTSANFVKKSSSDPTSITRVMLWTKAHKKKDGQLVNAKVAEPL 181
           DDWMDFV+EKTSA F +KSSSDP+S+TRV LWTKAHK+KD Q VN++VAE L
Sbjct: 207 DDWMDFVSEKTSATFKRKSSSDPSSVTRVALWTKAHKRKDRQPVNSQVAETL 257

[Close]

BLAST of Spg032832 vs. NCBI nr
Match: TYK07512.1 (uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK21220.1 uncharacterized protein E5676_scaffold359G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 154.5 bits (389), Expect = 9.7e-34
Identity = 84/149 (56.38%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 66   TRTRLALRR--QSRYNVNDDWQKQYLFQKMGRLWRVGKSRLVNKIRKAPTKDALLKLMPD 125
            TR ++ L +  QSRYNV +DWQK++ FQKMGRLWR GKSRLV +IR APTKDA+LKLMPD
Sbjct: 977  TRLKVVLWKSIQSRYNV-EDWQKKFFFQKMGRLWRAGKSRLVKQIRDAPTKDAILKLMPD 1036

Query: 126  NFQTTDDWMDFVNEKTSANF------------------------------VKKSSSDPTS 183
            N Q+ DDWMDFV+EKTSA F                              ++KSSSDP+ 
Sbjct: 1037 NLQSVDDWMDFVSEKTSATFKLKSEKYKAMKKKQLPHTCSRKGYARLAEEMRKSSSDPSL 1096

[Close]

BLAST of Spg032832 vs. NCBI nr
Match: KAA0036985.1 (uncharacterized protein E6C27_scaffold86G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 154.5 bits (389), Expect = 9.7e-34
Identity = 84/149 (56.38%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 66   TRTRLALRR--QSRYNVNDDWQKQYLFQKMGRLWRVGKSRLVNKIRKAPTKDALLKLMPD 125
            TR ++ L +  QSRYNV +DWQK++ FQKMGRLWR GKSRLV +IR APTKDA+LKLMPD
Sbjct: 1014 TRLKVVLWKSIQSRYNV-EDWQKKFFFQKMGRLWRAGKSRLVKQIRDAPTKDAILKLMPD 1073

Query: 126  NFQTTDDWMDFVNEKTSANF------------------------------VKKSSSDPTS 183
            N Q+ DDWMDFV+EKTSA F                              ++KSSSDP+ 
Sbjct: 1074 NLQSVDDWMDFVSEKTSATFKLKSEKYKAMKKKQLPHTCSRKGYARLAEEMRKSSSDPSL 1133

[Close]

BLAST of Spg032832 vs. NCBI nr
Match: TYK17902.1 (uncharacterized protein E5676_scaffold306G001840 [Cucumis melo var. makuwa])

HSP 1 Score: 154.5 bits (389), Expect = 9.7e-34
Identity = 84/149 (56.38%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 66   TRTRLALRR--QSRYNVNDDWQKQYLFQKMGRLWRVGKSRLVNKIRKAPTKDALLKLMPD 125
            TR ++ L +  QSRYNV +DWQK++ FQKMGRLWR GKSRLV +IR APTKDA+LKLMPD
Sbjct: 1014 TRLKVVLWKSIQSRYNV-EDWQKKFFFQKMGRLWRAGKSRLVKQIRDAPTKDAILKLMPD 1073

Query: 126  NFQTTDDWMDFVNEKTSANF------------------------------VKKSSSDPTS 183
            N Q+ DDWMDFV+EKTSA F                              ++KSSSDP+ 
Sbjct: 1074 NLQSVDDWMDFVSEKTSATFKLKSEKYKAMKKKQLPHTCSRKGYARLAEEMRKSSSDPSL 1133

[Close]

BLAST of Spg032832 vs. NCBI nr
Match: TYK08453.1 (uncharacterized protein E5676_scaffold654G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 154.5 bits (389), Expect = 9.7e-34
Identity = 84/149 (56.38%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 66   TRTRLALRR--QSRYNVNDDWQKQYLFQKMGRLWRVGKSRLVNKIRKAPTKDALLKLMPD 125
            TR ++ L +  QSRYNV +DWQK++ FQKMGRLWR GKSRLV +IR APTKDA+LKLMPD
Sbjct: 1042 TRLKVVLWKSIQSRYNV-EDWQKKFFFQKMGRLWRAGKSRLVKQIRDAPTKDAILKLMPD 1101

Query: 126  NFQTTDDWMDFVNEKTSANF------------------------------VKKSSSDPTS 183
            N Q+ DDWMDFV+EKTSA F                              ++KSSSDP+ 
Sbjct: 1102 NLQSVDDWMDFVSEKTSATFKLKSEKYKAMKKKQLPHTCSRKGYARLAEEMRKSSSDPSL 1161

[Close]

BLAST of Spg032832 vs. ExPASy TrEMBL
Match: A0A5A7TEX1 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G00480 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.6e-37
Identity = 80/112 (71.43%), Postives = 95/112 (84.82%), Query Frame = 0


Query: 69  RLALRRQSRYNVNDDWQKQYLFQKMGRLWRVGKSRLVNKIRKAPTKDALLKLMPDNFQTT 128
           +L  R +SRYNV +DWQ ++ FQKMGRLWR GKSRLV +IR APTKDA+LKLMPDN Q+ 
Sbjct: 147 KLPTRLKSRYNV-EDWQNKFFFQKMGRLWRAGKSRLVKQIRDAPTKDAILKLMPDNLQSV 206

Query: 129 DDWMDFVNEKTSANFVKKSSSDPTSITRVMLWTKAHKKKDGQLVNAKVAEPL 181
           DDWMDFV+EKTSA F +KSSSDP+S+TRV LWTKAHK+KD Q VN++VAE L
Sbjct: 207 DDWMDFVSEKTSATFKRKSSSDPSSVTRVALWTKAHKRKDRQPVNSQVAETL 257

[Close]

BLAST of Spg032832 vs. ExPASy TrEMBL
Match: A0A5D3DCM2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1702G00300 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 4.7e-34
Identity = 84/149 (56.38%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 66   TRTRLALRR--QSRYNVNDDWQKQYLFQKMGRLWRVGKSRLVNKIRKAPTKDALLKLMPD 125
            TR ++ L +  QSRYNV +DWQK++ FQKMGRLWR GKSRLV +IR APTKDA+LKLMPD
Sbjct: 977  TRLKVVLWKSIQSRYNV-EDWQKKFFFQKMGRLWRAGKSRLVKQIRDAPTKDAILKLMPD 1036

Query: 126  NFQTTDDWMDFVNEKTSANF------------------------------VKKSSSDPTS 183
            N Q+ DDWMDFV+EKTSA F                              ++KSSSDP+ 
Sbjct: 1037 NLQSVDDWMDFVSEKTSATFKLKSEKYKAMKKKQLPHTCSRKGYARLAEEMRKSSSDPSL 1096

[Close]

BLAST of Spg032832 vs. ExPASy TrEMBL
Match: A0A5A7T672 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00660 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 4.7e-34
Identity = 84/149 (56.38%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 66   TRTRLALRR--QSRYNVNDDWQKQYLFQKMGRLWRVGKSRLVNKIRKAPTKDALLKLMPD 125
            TR ++ L +  QSRYNV +DWQK++ FQKMGRLWR GKSRLV +IR APTKDA+LKLMPD
Sbjct: 1014 TRLKVVLWKSIQSRYNV-EDWQKKFFFQKMGRLWRAGKSRLVKQIRDAPTKDAILKLMPD 1073

Query: 126  NFQTTDDWMDFVNEKTSANF------------------------------VKKSSSDPTS 183
            N Q+ DDWMDFV+EKTSA F                              ++KSSSDP+ 
Sbjct: 1074 NLQSVDDWMDFVSEKTSATFKLKSEKYKAMKKKQLPHTCSRKGYARLAEEMRKSSSDPSL 1133

[Close]

BLAST of Spg032832 vs. ExPASy TrEMBL
Match: A0A5D3D211 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001840 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 4.7e-34
Identity = 84/149 (56.38%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 66   TRTRLALRR--QSRYNVNDDWQKQYLFQKMGRLWRVGKSRLVNKIRKAPTKDALLKLMPD 125
            TR ++ L +  QSRYNV +DWQK++ FQKMGRLWR GKSRLV +IR APTKDA+LKLMPD
Sbjct: 1014 TRLKVVLWKSIQSRYNV-EDWQKKFFFQKMGRLWRAGKSRLVKQIRDAPTKDAILKLMPD 1073

Query: 126  NFQTTDDWMDFVNEKTSANF------------------------------VKKSSSDPTS 183
            N Q+ DDWMDFV+EKTSA F                              ++KSSSDP+ 
Sbjct: 1074 NLQSVDDWMDFVSEKTSATFKLKSEKYKAMKKKQLPHTCSRKGYARLAEEMRKSSSDPSL 1133

[Close]

BLAST of Spg032832 vs. ExPASy TrEMBL
Match: A0A5A7T7V4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00340 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 4.7e-34
Identity = 84/149 (56.38%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 66   TRTRLALRR--QSRYNVNDDWQKQYLFQKMGRLWRVGKSRLVNKIRKAPTKDALLKLMPD 125
            TR ++ L +  QSRYNV +DWQK++ FQKMGRLWR GKSRLV +IR APTKDA+LKLMPD
Sbjct: 1014 TRLKVVLWKSIQSRYNV-EDWQKKFFFQKMGRLWRAGKSRLVKQIRDAPTKDAILKLMPD 1073

Query: 126  NFQTTDDWMDFVNEKTSANF------------------------------VKKSSSDPTS 183
            N Q+ DDWMDFV+EKTSA F                              ++KSSSDP+ 
Sbjct: 1074 NLQSVDDWMDFVSEKTSATFKLKSEKYKAMKKKQLPHTCSRKGYARLAEEMRKSSSDPSL 1133

The following BLAST results are available for this feature:

BLAST of Spg032832 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041468.1	3.2e-37	71.43	Plant transposase [Cucumis melo var. makuwa]	[more]
TYK07512.1	9.7e-34	56.38	uncharacterized protein E5676_scaffold1702G00300 [Cucumis melo var. makuwa] >TYK...	[more]
KAA0036985.1	9.7e-34	56.38	uncharacterized protein E6C27_scaffold86G00660 [Cucumis melo var. makuwa]	[more]
TYK17902.1	9.7e-34	56.38	uncharacterized protein E5676_scaffold306G001840 [Cucumis melo var. makuwa]	[more]
TYK08453.1	9.7e-34	56.38	uncharacterized protein E5676_scaffold654G00690 [Cucumis melo var. makuwa]	[more]

BLAST of Spg032832 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg032832 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TEX1	1.6e-37	71.43	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G0048...	[more]
A0A5D3DCM2	4.7e-34	56.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T672	4.7e-34	56.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3D211	4.7e-34	56.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T7V4	4.7e-34	56.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Spg032832 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..65
None	No IPR available	PANTHER	PTHR33144	OS10G0409366 PROTEIN-RELATED	coord: 75..141
None	No IPR available	PANTHER	PTHR33144:SF27	SUBFAMILY NOT NAMED	coord: 117..190
None	No IPR available	PANTHER	PTHR33144:SF27	SUBFAMILY NOT NAMED	coord: 75..141
None	No IPR available	PANTHER	PTHR33144	OS10G0409366 PROTEIN-RELATED	coord: 117..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg032832.1	Spg032832.1	mRNA