Spg032808 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg032808
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold11: 9146973 .. 9149818 (+)
RNA-Seq Expression	Spg032808
Synteny	Spg032808

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACTACCAAAACGATCAGAGCTTCAACATGCAGCAAGGATCGAGTTCAGGTACGCCTTTAGAAGCTTTAGTTAAAAATTTAGCTAATAGTATTCATGCTTTGCAAGAAGGTCAACTCAAATTTCAAGAGGAGACCTGTGCTGGGATGTACCAGCTAGGGACCCAGATCACCCAATTGGTTGACACTGTCGCTAAATTGGAAGCCAAGTTGATAAGCTGCCTATTCAACCTAAGATCCTGAGAAGAGAAGATGAATTCCCAACCACATACCCCTCCTCCATTTGTTGTAGTTGAAGAAGAAAAAGAAAAGAAGAAGCCTGAAAAAAGAGAAGAAAGACGAGTCCGACTTTTCCAAGAAGCGTGGGGTACATTTCGATCCCCCTTTGAATTTAAATTCTTTTGTTCCTGAAACTCCTTTTCCTAGCAGGTTAGCACTGCAGCCTAAGCCTTCAAAGGAAGATGAGGAGAAGGACATGCTTGACTTGTTTAAGAAGGTGGAGGTCAACATCCCGTTGTTGGACGCCATTAAAAAGATTTCTAAGGTTGGTAAGTCACTACAACAATTTTGGGCTTAGATGTCAGTTTTGCACCGTTATTAAACCTCTATGATCACAAATTTGAATCCGTTGTTGTTCTGGGTGTGATCTAACCCCTACGATCACGAATTACAACAATAACGATTTAAAACCTTCATGAAACGCCTCCGTGATCTTACATGTATAATCACAGATTACAACAATAACGGTTTAAAACCGTGGTTGTTATGGGTGTGATTGAACCCGTACGATGACGGATTACAACGATGACAGTTTAAAATCGACATCTTTGTCGACCCCTATGATAACGGTTTACAACAATGACAGTTTACAACCGACATATATGACTACATTAATGACGGTTTTAAAATGACATCTTTCCCTCAACACGTTCGATTACGATATGTTACGATGACGTTTTATAACTGTTATTATAGTGTCATAAGATGACAGTTATAAACTAACATCTTTCCTCATACCACCTACAACATATTTATTGCCATAATTCAAATCCACATCCAGAATACCTATTATTGCAATGCAAAATATTTTAATTGATCCAATAATCTACAGATATTTAAAACGAACATTTGAGAATATTATTCAATCCAAACACAACAATTGAGAAAACATCAAATACTTTATTTCATTCGATCCAAAAAACTCCAAACGTCACAATACAATATCCAAAACCACTAAATTGTTCTAAACTATATAGTAAACTGAAAGATTTTGCAAAAAGAATAAAATGTAAGCACAATCGCTTTTTTGTCCATTCAAACCCTACCAATATCTTATATCGTCTAAAAGGAAACAACTAGCTACCACAAGGATGAATACACTTCACGTGAAGTTTGACACATGTGTCACCCATTCAACTCGCACCTCGTCTAGTTGTTCTTGTGTGAACGGATTCTTAGTATTAAATTGAAAAAAAAAGATAGATATTACTATTATATTTAAGGAAAAGTACCGTACCGTATATATACACACAATTTTTTTTTTAATTATAGTTATACATATTTATTACCATAATTCAAATTCATATTTATATTTTATTCTAGATTGTTATTATTTTCTAGGATATTTATGTTGACATCTCTATGATCTTCTGTAGACACTTATAAATAGAGGTGTTCTCTATCCCTTGTGTTGTAATCAAGCAATCAAACTCCAATTGAGTTAGTGTCATAACACTCAATCAAATAAGTTTCTCTCCATATATTCTCTCGATTCTAAAATTTATCCTACTGCCTCAACATTCTTTCTCCCAACAAACGAAATTTCAGTTTTTGATGGAGAGCATTATGAATATTGGCAAGTCCAAATAGAGACAATTTTTATTTCTCAAGATCTTTGAGAAATCATTGAAAAAGCCTATGAAAAGTATCTCTGAGAGCACTTCAGAGAGGACCAATACTAGATCAAGAGGAGTTTGAGAAGAATAAAAAGTTAAATAAGCTTTAGTTCTTTGACTCATTCAACAAGGTGTTACTAAGTCTATTGTCCCTCGAATTTTTAGTATTAAAAAAACTAAAGATTCCAGTTTTGCAAAAAGAATTTCAAGGATCTCAAAATTAAAAATTATCTCCATCAAGTTGCAGTCTCTGTGGAGAGATTTTGACAGCTTGGTGTTGAAGGAAAGTGAAAACATTTGGGAATTCTTTTCTCGAGTTGCAGAAATCATCAACCAAATGAAGAGCTTGCAGAGACCTATTTCAGAAAAGAGTAGTGTATATGAAAAAGCTCTTAAGAGTCTTCCTCCAAAAGTTAGCCATGTTGTTGCAGCCATTGAAGGGTCCAAAGATGTGTCTAAGTTGACATTCTTTAAACTTATGGGTTCACTTCCAGCCCATGAAGAAATATTGAACAAGTCTCCAAGCCAATATGTGGATCACAAAGTTTTTCATGTATCAAACTCAATTTTGCATAAAAAGAAGACTAGTGTCGTCGATCACCGCACTGATGAACCTAAATGTTATAAAATTAAAAAGGGGAGAGAGAACCTCTAGATTACCGCTGTCAACCTCTGCTACAAGCTCCGTCGATCACCAACGTCAACAACCGTTAGAAGATCAGTGTCGTCGTCGCCGTAAGAAACTCAGCTCCGTCGCTGCCGATAGTAATCAGTGTCGTCGCCGCCGTTACACACATTGAACTGTTGCCACTTTTACACACCCAAGTCGTCACGGCCGTTGAACACCCAGACCACTCGCCGACGCCGTTGAAAACACCCAAGCAGTCGCCGCCGTTACAATATCACTCGCTGGACGACGAGAAGGAGTGTAGAGAAGAAGCGGCTGGATGA

mRNA sequence

ATGTACTACCAAAACGATCAGAGCTTCAACATGCAGCAAGGATCGAGTTCAGGTACGCCTTTAGAAGCTTTAGTTAAAAATTTAGCTAATAGTATTCATGCTTTGCAAGAAGGTCAACTCAAATTTCAAGAGGAGACCTGTGCTGGGATGTACCAGCTAGGGACCCAGATCACCCAATTGGTTGACACTAAGATCAGTGTCGTCGTCGCCGTAAGAAACTCAGCTCCGTCGCTGCCGATAGTAATCAGTGTCGTCGCCGCCGTTACACACATTGAACTGTTGCCACTTTTACACACCCAAGTCGTCACGGCCGTTGAACACCCAGACCACTCGCCGACGCCGTTGAAAACACCCAAGCAGTCGCCGCCGTTACAATATCACTCGCTGGACGACGAGAAGGAGTGTAGAGAAGAAGCGGCTGGATGA

Coding sequence (CDS)

ATGTACTACCAAAACGATCAGAGCTTCAACATGCAGCAAGGATCGAGTTCAGGTACGCCTTTAGAAGCTTTAGTTAAAAATTTAGCTAATAGTATTCATGCTTTGCAAGAAGGTCAACTCAAATTTCAAGAGGAGACCTGTGCTGGGATGTACCAGCTAGGGACCCAGATCACCCAATTGGTTGACACTAAGATCAGTGTCGTCGTCGCCGTAAGAAACTCAGCTCCGTCGCTGCCGATAGTAATCAGTGTCGTCGCCGCCGTTACACACATTGAACTGTTGCCACTTTTACACACCCAAGTCGTCACGGCCGTTGAACACCCAGACCACTCGCCGACGCCGTTGAAAACACCCAAGCAGTCGCCGCCGTTACAATATCACTCGCTGGACGACGAGAAGGAGTGTAGAGAAGAAGCGGCTGGATGA

Protein sequence

MYYQNDQSFNMQQGSSSGTPLEALVKNLANSIHALQEGQLKFQEETCAGMYQLGTQITQLVDTKISVVVAVRNSAPSLPIVISVVAAVTHIELLPLLHTQVVTAVEHPDHSPTPLKTPKQSPPLQYHSLDDEKECREEAAG

Homology

The following BLAST results are available for this feature:

BLAST of Spg032808 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032808 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032808 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032808 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg032808.1	Spg032808.1	mRNA