
Spg032760 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGAAATAGGTCGAGTCTACAGACCAGGAAACTAGCTAAGACTGTGAGTGACAAAACAAATTTCGAAAATTGTTTCTAAACGGTTGTTCATGATTAGATGTTTTATATGTTTTTCTATGAACGATACATGATTTCTATGAATGGTTTCAAGCCTAAGTGTTGAGCTTAGATTTTCTAATGAGGTTTATATACGAGCACGTGGTTAATGACTTTATTAAAAGTAGTTGAAATGATATCTTTTAAAGCAAAGTATGTATTAGCAAGTACTGTTTAAAGATTTTCAGTTTTTCACGAGCAAGCTGAGTAAGCTTAAGTTTTACGAAAGATAACGATAAGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGGCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTTCGTGACAAAGATGCTGTCGTGAGTGCTGGGCGGGTCCCACTACGGCAAAGACGATGGGAGTGTTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAACGTTTGATGTACTTGATATGCCTTACTAGATATTTAATGACTCCCTGCGATGTTTTTGAGAAAGCTTTTATCATTGCCCGTTTATGTCTAATGCCTTGGTTGAGCAGCTTGATACGTTTAAAGTTTTACCATGTGTTCTGATTTCTGGATTTACAGTTTTTAAATTTAGTCACTCACTGGGCTTCGTAGCCACTCTTTCAAAAAAAATTTCCCACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAATTCAAGCTCTAGTACGTGGGTGGAGTTGTATATTGAGTCTGTCTATATTGTAAATGTTTTTGTAAGGATTGAATAATTAACGATTTGTGTAAGTTCTAGAAGTCGTGGTTGTATAACCCCAGTTGAATAGGGTTTTGGTTGTCATATCTATATCAGGTTAATTTTCAAACCAAGCTATGTCAGGGCTGCACCTCGTGTATGTTTAAAGGTTTTCAGGGATTCCGCTGTGTTGTGTTGCATGTAAAGTACTCCATATCTAATATTAGCATGTTTATCAGGTTCAGTGATTCAGCAGGGTCAACAGGTGTCGTTAGAGGAGGATGATGTTTGTTGGCTTCACGCCATCTCCCTGACTAAGCTAGCAGGTGGTTTGGGAGGGGGTGTGACAGTAAGACACATGGAGAGGAGAATGTCCATAGTGGATTCTAGGTGTGCAATGGAGAATACATGCATCTTTGCATGA ATGGGAGTGTTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTCAGTGATTCAGCAGGGTCAACAGGTGTCGTTAGAGGAGGATGATGTTTGTTGGCTTCACGCCATCTCCCTGACTAAGCTAGCAGGTGGTTTGGGAGGGGGTGTGACAGTAAGACACATGGAGAGGAGAATGTCCATAGTGGATTCTAGGTGTGCAATGGAGAATACATGCATCTTTGCATGA ATGGGAGTGTTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTCAGTGATTCAGCAGGGTCAACAGGTGTCGTTAGAGGAGGATGATGTTTGTTGGCTTCACGCCATCTCCCTGACTAAGCTAGCAGGTGGTTTGGGAGGGGGTGTGACAGTAAGACACATGGAGAGGAGAATGTCCATAGTGGATTCTAGGTGTGCAATGGAGAATACATGCATCTTTGCATGA MGVLGGPHYIVGLVNVGCTGRALHNVDRSCSVIQQGQQVSLEEDDVCWLHAISLTKLAGGLGGGVTVRHMERRMSIVDSRCAMENTCIFA Homology
BLAST of Spg032760 vs. NCBI nr
Match: TYK08801.1 (hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]) HSP 1 Score: 75.5 bits (184), Expect = 2.6e-10 Identity = 43/109 (39.45%), Postives = 53/109 (48.62%), Query Frame = 0
BLAST of Spg032760 vs. NCBI nr
Match: KAA0046503.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK01915.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 70.5 bits (171), Expect = 8.5e-09 Identity = 40/76 (52.63%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of Spg032760 vs. NCBI nr
Match: TYK02142.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 65.5 bits (158), Expect = 2.7e-07 Identity = 38/72 (52.78%), Postives = 44/72 (61.11%), Query Frame = 0
BLAST of Spg032760 vs. ExPASy TrEMBL
Match: A0A5D3CAC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00040 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.3e-10 Identity = 43/109 (39.45%), Postives = 53/109 (48.62%), Query Frame = 0
BLAST of Spg032760 vs. ExPASy TrEMBL
Match: A0A5D3BRV3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3741G00040 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 4.1e-09 Identity = 40/76 (52.63%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of Spg032760 vs. ExPASy TrEMBL
Match: A0A5D3BTL2 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00270 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.3e-07 Identity = 38/72 (52.78%), Postives = 44/72 (61.11%), Query Frame = 0
BLAST of Spg032760 vs. ExPASy TrEMBL
Match: A0A5D3DBQ7 (G-box-binding factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00320 PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 6.8e-04 Identity = 23/30 (76.67%), Postives = 25/30 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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