Spg032659 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg032659
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold11: 9511681 .. 9513131 (-)
RNA-Seq Expression	Spg032659
Synteny	Spg032659

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGGAACAAGAAGCGTGAGACCCACGAGTTTTTCGCCGGCTGTTGTGGAACGAAGCACCAATGCTCCTACTCCTTCATCCTCGACAATGTCGACTGCACAGAGGGAGAATCTAAGTGGTTCTCAACAAAGAAGACCCACGCCCTCCGATTCTCTCCACCAAACCCAAAAACCCGCAGGCCAACAGTTGAGAAAACGCTCCAAGGAATGGTTTGCTATGATCCATGAGATGGGATCTCAAAGGCGCATGACCATTGAAGAAGAGGCACGGTTAAGGGCGGCTGAAAAATCTTACAGAGTGGGAGAGAGCTCTCGATAAGGAGAGACTCAAAAGGGTAACGTTTTTGCCCCTGCTACTAACCCAACTTCTTCTTGCAGGAACAAGTCGTTTGTAACTTATAGTGCAAGAAAGAAAGACTCCAAGAAGGCTGACCACGAAAAGCCTCTAATTATTGAGCCCCTTAAAGTAGCAAGAATGCCGCCGGATGTGTTCGAAGAGATGATTCGACAGGTCGTTGCACAAGCCCTCATCATAGCTAAAGGATACAGGGCTGAACAATATGCACTTGAGGAAATAAAGGCTGAAAAAGAAAGGGAAAATCAGAGCATGAGGGATGAAGATGAATTTGCAAGGAAAAGGGACTTGGAAGATGAGAGGGAAGCTGAGAAAAAGAAAGAAGAAGAAAGACAAGAGGTCGAGAGGGCCATTCAAGCTGAGAAAGAAAGAAAAGAAGACGAAGAACTTAGGAGGTTGACTGGTGAACTCCAACTCCTTGAGAAAGAAAAAGAAAGAAAAGAGATTTTGAGAGAAGAAGAAGAACGAAGAAAAGAGGCTGAGGATTTTCTTGCAGCCGTTGAGCCACTGCACAAGGCTCAAAGTGAAGCTGAACAACTGCAAGAAGATGAAGAAGAGGTCCTTGAAGAGCCAAGAGAAGAAAAATTAGAAAAAGAAAAAGAGGAAGAAATTGAAGGCCAGAATGCGACTGCATTTGGGTCGCATTATGAGGAAGGCTAAGAAAAGGCAACTAAAGAGCAACAAGCTGATGAGGCCCTTGATCCGTTGTTCGAGTATGATATTAGGGACCTCCACTAGTTGCTGATAGCACATCTTCAGGGGAGAAAAAGGATGAAGAGGAAATTGAAGAAGAAGAGGCCGAGACCTCTAGTGATAGTGAGACCGAATCAGATTCTGAAATCAAGGAATTGGATGATGACCAAATTCCTATTTCTGTAGCTTTGAGGAAGAAACGAAGAAGAGAACTGAGAGCCGAGAGGAGGACAAAGAATAAAAATGACCCCATCTTTGCCAAGAAGCCGAGGACAAGGTCCATGGACGCCTCTCCTGCACCTCCTACAACCTCCACACCTGTCAAACCGAAGATCAAATCGCCTAAGGCGCCATCATCAAAGAATTGGTTCCTTGAAGTCTTCAAGGATGTTAATTTCTAG

mRNA sequence

ATGCATGGAACAAGAAGCGTGAGACCCACGAGTTTTTCGCCGGCTGTTGTGGAACGAAGCACCAATGCTCCTACTCCTTCATCCTCGACAATGTCGACTGCACAGAGGGAGAATCTAAGTGGTTCTCAACAAAGAAGACCCACGCCCTCCGATTCTCTCCACCAAACCCAAAAACCCGCAGGCCAACAGTTGAGAAAACGCTCCAAGGAATGGTTTGCTATGATCCATGAGATGGGATCTCAAAGGCGCATGACCATTGAAGAAGAGGCACGGAACAAGTCGTTTGTAACTTATAGTGCAAGAAAGAAAGACTCCAAGAAGGCTGACCACGAAAAGCCTCTAATTATTGAGCCCCTTAAAGTAGCAAGAATGCCGCCGGATGTGTTCGAAGAGATGATTCGACAGGTCGTTGCACAAGCCCTCATCATAGCTAAAGGATACAGGGCTGAACAATATGCACTTGAGGAAATAAAGGCTGAAAAAGAAAGGGAAAATCAGAGCATGAGGGATGAAGATGAATTTGCAAGGAAAAGGGACTTGGAAGATGAGAGGGAAGCTGAGAAAAAGAAAGAAGAAGAAAGACAAGAGGTCGAGAGGGCCATTCAAGCTGAGAAAGAAAGAAAAGAAGACGAAGAACTTAGGAGGTTGACTGGTGAACTCCAACTCCTTGAGAAAGAAAAAGAAAGAAAAGAGATTTTGAGAGAAGAAGAAGAACGAAGAAAAGAGGCTGAGGATTTTCTTGCAGCCGTTGAGCCACTGCACAAGGCTCAAAGTGAAGCTGAACAACTGCAAGAAGATGAAGAAGAGGGACCTCCACTAGTTGCTGATAGCACATCTTCAGGGGAGAAAAAGGATGAAGAGGAAATTGAAGAAGAAGAGGCCGAGACCTCTAGTGATAGTGAGACCGAATCAGATTCTGAAATCAAGGAATTGGATGATGACCAAATTCCTATTTCTGTAGCTTTGAGGAAGAAACGAAGAAGAGAACTGAGAGCCGAGAGGAGGACAAAGAATAAAAATGACCCCATCTTTGCCAAGAAGCCGAGGACAAGGTCCATGGACGCCTCTCCTGCACCTCCTACAACCTCCACACCTGTCAAACCGAAGATCAAATCGCCTAAGGCGCCATCATCAAAGAATTGGTTCCTTGAAGTCTTCAAGGATGTTAATTTCTAG

Coding sequence (CDS)

ATGCATGGAACAAGAAGCGTGAGACCCACGAGTTTTTCGCCGGCTGTTGTGGAACGAAGCACCAATGCTCCTACTCCTTCATCCTCGACAATGTCGACTGCACAGAGGGAGAATCTAAGTGGTTCTCAACAAAGAAGACCCACGCCCTCCGATTCTCTCCACCAAACCCAAAAACCCGCAGGCCAACAGTTGAGAAAACGCTCCAAGGAATGGTTTGCTATGATCCATGAGATGGGATCTCAAAGGCGCATGACCATTGAAGAAGAGGCACGGAACAAGTCGTTTGTAACTTATAGTGCAAGAAAGAAAGACTCCAAGAAGGCTGACCACGAAAAGCCTCTAATTATTGAGCCCCTTAAAGTAGCAAGAATGCCGCCGGATGTGTTCGAAGAGATGATTCGACAGGTCGTTGCACAAGCCCTCATCATAGCTAAAGGATACAGGGCTGAACAATATGCACTTGAGGAAATAAAGGCTGAAAAAGAAAGGGAAAATCAGAGCATGAGGGATGAAGATGAATTTGCAAGGAAAAGGGACTTGGAAGATGAGAGGGAAGCTGAGAAAAAGAAAGAAGAAGAAAGACAAGAGGTCGAGAGGGCCATTCAAGCTGAGAAAGAAAGAAAAGAAGACGAAGAACTTAGGAGGTTGACTGGTGAACTCCAACTCCTTGAGAAAGAAAAAGAAAGAAAAGAGATTTTGAGAGAAGAAGAAGAACGAAGAAAAGAGGCTGAGGATTTTCTTGCAGCCGTTGAGCCACTGCACAAGGCTCAAAGTGAAGCTGAACAACTGCAAGAAGATGAAGAAGAGGGACCTCCACTAGTTGCTGATAGCACATCTTCAGGGGAGAAAAAGGATGAAGAGGAAATTGAAGAAGAAGAGGCCGAGACCTCTAGTGATAGTGAGACCGAATCAGATTCTGAAATCAAGGAATTGGATGATGACCAAATTCCTATTTCTGTAGCTTTGAGGAAGAAACGAAGAAGAGAACTGAGAGCCGAGAGGAGGACAAAGAATAAAAATGACCCCATCTTTGCCAAGAAGCCGAGGACAAGGTCCATGGACGCCTCTCCTGCACCTCCTACAACCTCCACACCTGTCAAACCGAAGATCAAATCGCCTAAGGCGCCATCATCAAAGAATTGGTTCCTTGAAGTCTTCAAGGATGTTAATTTCTAG

Protein sequence

MHGTRSVRPTSFSPAVVERSTNAPTPSSSTMSTAQRENLSGSQQRRPTPSDSLHQTQKPAGQQLRKRSKEWFAMIHEMGSQRRMTIEEEARNKSFVTYSARKKDSKKADHEKPLIIEPLKVARMPPDVFEEMIRQVVAQALIIAKGYRAEQYALEEIKAEKERENQSMRDEDEFARKRDLEDEREAEKKKEEERQEVERAIQAEKERKEDEELRRLTGELQLLEKEKERKEILREEEERRKEAEDFLAAVEPLHKAQSEAEQLQEDEEEGPPLVADSTSSGEKKDEEEIEEEEAETSSDSETESDSEIKELDDDQIPISVALRKKRRRELRAERRTKNKNDPIFAKKPRTRSMDASPAPPTTSTPVKPKIKSPKAPSSKNWFLEVFKDVNF

Homology

The following BLAST results are available for this feature:

BLAST of Spg032659 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032659 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032659 vs.


Match Name	E-value	Identity	Description

BLAST of Spg032659 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 158..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 334..348
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..377
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..249
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 285..310

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg032659.1	Spg032659.1	mRNA