Spg032613 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg032613
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	double-stranded RNA-binding protein 2
Location	scaffold11: 9345269 .. 9350747 (-)
RNA-Seq Expression	Spg032613
Synteny	Spg032613

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCCTTTCTCTCTCGCCAAGCAGCCTCAGGGCTCTCTCTCTCTCTCTCTTCTTTCTCTCTCTGAAAGTGAAGGGGGAAAAAACCCTTAAAAACCTTTGATCTCGCCGGATTTTCATCTCCGTCACCGACGACGGTGAGATTCTTCTTCTGTAGTCTTGATTTTTCTGGTAGATTACGGCGGATCGGATCTGGCCTAGGGTTTTTGTTTTCTTTGAAAAGCCCTAACGGAGGAGGGAGGAGGGCGGAGGTTAATTTGTGTTGTTGTAGTGAACTAAGGAAAAGGAGTGAGGAGGAGCTGAGACCGAATCCGAGCAGAAATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGGAGTTGCTTCAATCTTCCCTCGTATACCTGCATTAGGGAAGGACCAGACCATGCGCCGAGGTTCAAAGCTACTGTTAACTTCAATGGCGAGATCTTTGAATGCCCTCAGTACTGCTCTACTCTCCGCCAGGCCGAGCACTCCGCCGCTGAGGTCGCCTTAAACGCCCTCTCTAACCGTGGTCCCCCTCATTCGCTTGCGGCTAGGATCCTGGTGAGTCCTTTTCAAATGGTTGTCTGGTTTTTGTTCTTGTTCTCTGGCTTGCTTCTCTCCTTGATCTTCATTTCTCTGTTTTTTTTTTTTTTTTTTTTTGTGTATTGAATCGATGTTACTGTTTTCGGTAGGATTTGCTACTGCGAGTTAGGGAAATTAGTTAGTAGTTTTAGGTTTTTGTTATGTTAGTGTTTGTTGTGCATTTTGTTCTTGTTCTCCTCTTCTTAAGTGTTTGTTGTTATCATTTCCGGTTTGTGCGGGTTAGAAGCTGGGTTATAGAGAAATTGCACAATCGGTGCGTCTTTTTAGCGATGATGCCCTTCGCACCTCAGCTGGAGTACTTAGTCCGCGAATATCTCGGTCCGTGGGTTAATTAAGATCCAAGAGAGTTGGTTCTTCTTCTATTTGGGGTTTAAATGATTGATGTGTCATGGATTAGGTTGGGTTTTTTCTTCTAAGTTATGAGACGGACTTCTGATCTCTCTGATCGGCCGGAATTCTCTGACTAGGTCTACCGCCTACGGTTTAGGGTCATCTTTGAACGAAAAGTGTGAACTCGTGACGCTTCTTCGAGGGTCCGTTCCATGAGAAGAGGCATCTAGCTTTGTTTACCTTATTATCTCGGAGCCAGCTGTCGGGAGTAGTCTTCTCGGGCAAGTTGGTGTAATTAATTTGCTCATTAATGGGTTTGTCGGTCGTCCAATTGTGTTTTCGGTAGCTCCCAACTTTGGCCCATTTTATTTCTCCGATCTCATAAATGACCAGATGGGTATCGTAGAAACGGCAGGGACCAGGAATCCAGCACCAATTGTGATAAACTTGTTGGAGGCTGAATTTCAGTTAGAGATGATTCATGTAGACCAATTAGAAATTAGGAGGATGTTTCCATTGTCTTGTTCATAAAAGTCTTGAGGCTTTAAAACTTGGGTTTCAATAATTTTATGTAATTATTTCTCCCCGCGTTTCAGTAGAAATTGTTTGACTAAACTTCTCGACTTTGTTGTTTTTAAAATTTTATTTCTCCCCTTACGCCGTTCAAGAAAATGCGTGCATGTGTCTCTGTCAACTTAATTGTGTTTTAAAAATAAAAACCTTTGTTTATCTTGGTGTTTCAAGAAGGAGATGTGGAATTTTCGGTCGATTTGGGGTTACTTTTCATTGAACATCGTTGTTTTCCAACAAGATCTATGTCCGGATAAGGAGCTTTAGGTTCTATTGTATCGCCTTAGTGATTTCAGTTAAATGAGGATTTGTTTGCTATAAGTTAAAAATATCAAATATTTTGTTTCGGTTGGTCGCTATGGCGCACAGCCTGGTTAATTGATGTTTCTTAGGTTGAGTAATTTATTGCTCATTACCTTGGTGCTTTCTTATTCTATCTGTATCTCTTGTTTTTGGCTGGTAACAGAGCTGGTAATTGCTACTTTGAACTTTAATCTGAAAAGACTTGGTCATGAAATAGAGCTGTAGTGGTTAAGTGGTGGGTGTAGACTGATGAAAAAATACACTTCCATTTTATCGAGTTCCATTATGCAAAGCAGTATGTTAGTGATTTATAATGGAAGAATTGGAGCTTAGCTAGCTTATTATCCGTATACAGTGCCACAGAAGTAGTTTTGAAAAAATTATGAAATATTAATACCTTCTAGAATTCAATTTTAAACAGTAGAGATCATTACAAATCAAATTATGATGTAGATGAGCTTCAAGTTCAGGTTGCCTCAAGTCAAATAGAATTTTTTACTGCTCCCTTTATTAAGGAGTGAGAAAACTAGTTGCACCTTAAAAATTGATCAAATGGAATCTGCAGTTTTCTCATTACAAACTTAAGTTACCGATTTCTTTAATTTGAAGGTATTATTAACGATAATAAAATGGTTTCCTGGACACGAGGTCTCTTGAATGAAATTATTATTTTAAGGTAAAAAATATTTCTAGGTTTAAACACTGTTGAGTGTTGAGAATGTGGAGTACATTAAGAATAATTGATAAGTGATAACATTATAGAATTTTTTCCCGGTCTCTAATTGGAGTGATAAAATTTTTTCTAACTACTCTACTGCCATGATCAACTTTCAATGGAAGGCTTTTTTGTAGCTCCTTTTGGAGGAGGGATGTCTTATCCCTTCATCCTTAGGTTGATATTTTGGCTATACCTTTTGTGAATGAAGTTCTTTTTTCTTCTCCAAAAAAAAAAAAAATGTATTTCCTGCTGCTTTTACGAATGAGTAATATTTTCTGGTCAATTTATTCCTAGCACTATCTGCTAAAATGCAAGATGCGTAAAAGATAATATCATTGAATTATTATAAAAGGAGAAGATTTATAAATTCTACTAATCTTCTTAGGCATAGTATTGTAAATTTTTCTCTTTTGATATTGTTCTTCAATCTCCTAAATGTTCTTGATATGAACTGAACATGCTGCTAATATCCCTGCATGAGCTGCCTTAGCCGATTTTTAGTTTAATTACTTACTATAAACTTCTATGACCAGGATGAGACAGGGGTTTACAAGAACCTCCTGCAGGAAATTGCCCAAAGAGTTGGAGCCCCATTGCCACAATATACAACATTCAGATCAGGCCTTGGTCACCTACCTGTTTTTACAGGAATAGTAGAATTGGCTGGAATTACATTTACTGGAGAACCTGCCAAGAACAAAAAACAGGCGGAGAAGAATGCTGCAATGGCAGCTTGGTCAGCCTTAAAACAATGTAAGTTTTTATTATTTATTTATTTATGTTTTCCGTATATGACACTATTATTCAGAGCCAAGAGCGAATAGACCATCTTATTTTGTACATATTTTGAGCAAGTTAATGTATGCAACCTGCCAACCCATATATGATATTGATATCTGCTGTAAACATGGAGATTAGAATTCAAACAATTCGTCTGCGACTTGGTTGTGGCAGTGTTCTTTATTATAGAGCCATTATTTCCTATCAAAGCCAAATATCCTATTCTTGATGTGCTTCAGCCATGCTTAAAAATTAAATATTTTACCCTCCAGTATTTCTAATGCGAATATGAAAACATGACTCTAAGCTTTTGAGAGAGTTAAGAGCACACACCATGGAATTTCCTCTTAAAATAGATATTATCAATTGCAAACATACATTATTATAATTCAAAGTTGACATAATTTCATTTTAAGAAAATTATTTACCATATGGTTGTGTCTATTTATTTCATATTCCGGTGTTGAGATAACATTTGGTTTTAATTTTGGCTAGTGGCTAAAGAATCAGCAAGCTCTTCATCGGAACCAGAAAACAATGATGAGTTGGAGCAGATCACTATAGCTCGAGCCTTATTGAATTATCGCCAAAAGGAAAAAATGGCTATGTCAAATCCAAATGCAACAATACCATTCCCCAAAAAACTTCAAATTCAAAGTCCAAGGCCAACCAGTCCCCAACGTCCCCCTGCTCCAACATCGAAGATTCTTCCTTTAATTTGCCAAAAGGCAGCTCCTCGAAGCAGAGCTCCGTTTTCAGCAAATAAAATCCCCATTCCACAATCCCAAACTCCTGCACTAGAAGGCTCTGGAACCCGCCCCCAGAAGTTCGGTGCCGGAGCTGCTCTTTCTTATATTCCCGTTCAGCAGTTTAGGACATCTTGCCATGGCATTGCCCCACCAGTGACAATTAGAACAGCAATGCCTGTGTATTCTGCCCCACCTCTACCGCAACCATCAAAGCTGCCGCCACAGCAAGTAATTCGAGTACCACCCGTACGTATCGCCCCACCCGTTTCTATTAGGCAAGCAATTCCTGTTTTTGCTGCTCCCCCAGTAGTACGCAAGGAAAATCCTCCGGCAGTTAAAAAAGAAGATTGTCCAGCTCCAGCTGCTCCAAAAGAAGACCCTCCTACTCTTTCCGCGCCCTCACCGCCAACTAAAGAATCACCTGCTGAAGTAGAACAAGCTACAACCACAGTGGTGAACAGTCAGCAAGAAACTAAGACATTAGAGAACCTCGAACAACTCAAAATTTGATGAGGTGAATCATTAGAAGACCACATAGGAGATTGTCGTATGGTTTTGCAGTAAAGTTAGGTTATCTCATCTTGTCCGCATCTTATTTTGAGTGTCAACCTTTTCTCTTTTCATCTTTTTTGCCCTGTTTTGTTCAAACTTGAGTTGTTGAGAGGTGGAAAAGTTAGTATCAGCATCCCTGCAGCAATGCCATTCATCAGCAACTGTGTCGACTTATGTACTTATATATTAGTATCTTTGGGCATGTTGTCCTATCTTCTCCAGGAATTCTTTTCTGATTTCCATGCCATCTTTGCATCCCAAGATCGGCTCGATGAGCCCTAGGATGCATGGATATGTCAAGGCTGTCACCTAGGGTCACTGGTAACACCACCTCGCCCGTCGCTCGGGACCCTCATTTCCATTTTCTGCATTTCTATAATTTCATGCATATATGTTTGCTGATCTTGTCTGAACAGAGATTCTAAAGATGTTCATGTTGTGGCTTCCTTCTAAACGGCCCTTCAAGAGGCTTGGAATGATATGGTTGCCGAAAATTCGGAGTTGAAATTTTCGCTCGGAAGTGAATGATATTTGTATTTCAGGTGGTGAAATGCATTATGTTAAGGAAGAGAGATTGTTCATCTTCCTCAAAATTCATGAGCAATTTCTCATGGATCAATTCCAAAAGTAAATGATATAGGTTTTAGTGTAAAATGTCCAATTATGCCATGCAAAAATCAAATTAGGTAGGATTCTCTCTTAAGTTAACTGTCTAATTGTTCTTATATTAGCCTTGCTATGATTGTGAAAGTGCTAAATACTTGAGAACAATTTCTATTGTCTGATGAAATACAAGGGATGAATTCTTTGTGAAAAGAGAGGAGTGCATATAAATTGTACAGTAACTTGTAATGAAGACTGAAGAGTGTG

mRNA sequence

ATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGGAGTTGCTTCAATCTTCCCTCGTATACCTGCATTAGGGAAGGACCAGACCATGCGCCGAGGTTCAAAGCTACTGTTAACTTCAATGGCGAGATCTTTGAATGCCCTCAGTACTGCTCTACTCTCCGCCAGGCCGAGCACTCCGCCGCTGAGGTCGCCTTAAACGCCCTCTCTAACCGTGGTCCCCCTCATTCGCTTGCGGCTAGGATCCTGGATGAGACAGGGGTTTACAAGAACCTCCTGCAGGAAATTGCCCAAAGAGTTGGAGCCCCATTGCCACAATATACAACATTCAGATCAGGCCTTGGTCACCTACCTGTTTTTACAGGAATAGTAGAATTGGCTGGAATTACATTTACTGGAGAACCTGCCAAGAACAAAAAACAGGCGGAGAAGAATGCTGCAATGGCAGCTTGGTCAGCCTTAAAACAATTGGCTAAAGAATCAGCAAGCTCTTCATCGGAACCAGAAAACAATGATGAGTTGGAGCAGATCACTATAGCTCGAGCCTTATTGAATTATCGCCAAAAGGAAAAAATGGCTATGTCAAATCCAAATGCAACAATACCATTCCCCAAAAAACTTCAAATTCAAAGTCCAAGGCCAACCAGTCCCCAACGTCCCCCTGCTCCAACATCGAAGATTCTTCCTTTAATTTGCCAAAAGGCAGCTCCTCGAAGCAGAGCTCCGTTTTCAGCAAATAAAATCCCCATTCCACAATCCCAAACTCCTGCACTAGAAGGCTCTGGAACCCGCCCCCAGAAGTTCGGTGCCGGAGCTGCTCTTTCTTATATTCCCGTTCAGCAGTTTAGGACATCTTGCCATGGCATTGCCCCACCAGTGACAATTAGAACAGCAATGCCTGTGTATTCTGCCCCACCTCTACCGCAACCATCAAAGCTGCCGCCACAGCAAGTAATTCGAGTACCACCCGTACGTATCGCCCCACCCGTTTCTATTAGGCAAGCAATTCCTGTTTTTGCTGCTCCCCCAGTAGTACGCAAGGAAAATCCTCCGGCAGTTAAAAAAGAAGATTGTCCAGCTCCAGCTGCTCCAAAAGAAGACCCTCCTACTCTTTCCGCGCCCTCACCGCCAACTAAAGAATCACCTGCTGAAGTAGAACAAGCTACAACCACAGTGGTGAACAGTCAGCAAGAAACTAAGACATTAGAGAACCTCGAACAACTCAAAATTTGA

Coding sequence (CDS)

ATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGGAGTTGCTTCAATCTTCCCTCGTATACCTGCATTAGGGAAGGACCAGACCATGCGCCGAGGTTCAAAGCTACTGTTAACTTCAATGGCGAGATCTTTGAATGCCCTCAGTACTGCTCTACTCTCCGCCAGGCCGAGCACTCCGCCGCTGAGGTCGCCTTAAACGCCCTCTCTAACCGTGGTCCCCCTCATTCGCTTGCGGCTAGGATCCTGGATGAGACAGGGGTTTACAAGAACCTCCTGCAGGAAATTGCCCAAAGAGTTGGAGCCCCATTGCCACAATATACAACATTCAGATCAGGCCTTGGTCACCTACCTGTTTTTACAGGAATAGTAGAATTGGCTGGAATTACATTTACTGGAGAACCTGCCAAGAACAAAAAACAGGCGGAGAAGAATGCTGCAATGGCAGCTTGGTCAGCCTTAAAACAATTGGCTAAAGAATCAGCAAGCTCTTCATCGGAACCAGAAAACAATGATGAGTTGGAGCAGATCACTATAGCTCGAGCCTTATTGAATTATCGCCAAAAGGAAAAAATGGCTATGTCAAATCCAAATGCAACAATACCATTCCCCAAAAAACTTCAAATTCAAAGTCCAAGGCCAACCAGTCCCCAACGTCCCCCTGCTCCAACATCGAAGATTCTTCCTTTAATTTGCCAAAAGGCAGCTCCTCGAAGCAGAGCTCCGTTTTCAGCAAATAAAATCCCCATTCCACAATCCCAAACTCCTGCACTAGAAGGCTCTGGAACCCGCCCCCAGAAGTTCGGTGCCGGAGCTGCTCTTTCTTATATTCCCGTTCAGCAGTTTAGGACATCTTGCCATGGCATTGCCCCACCAGTGACAATTAGAACAGCAATGCCTGTGTATTCTGCCCCACCTCTACCGCAACCATCAAAGCTGCCGCCACAGCAAGTAATTCGAGTACCACCCGTACGTATCGCCCCACCCGTTTCTATTAGGCAAGCAATTCCTGTTTTTGCTGCTCCCCCAGTAGTACGCAAGGAAAATCCTCCGGCAGTTAAAAAAGAAGATTGTCCAGCTCCAGCTGCTCCAAAAGAAGACCCTCCTACTCTTTCCGCGCCCTCACCGCCAACTAAAGAATCACCTGCTGAAGTAGAACAAGCTACAACCACAGTGGTGAACAGTCAGCAAGAAACTAAGACATTAGAGAACCTCGAACAACTCAAAATTTGA

Protein sequence

MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSAAEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFTGIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIARALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRAPFSANKIPIPQSQTPALEGSGTRPQKFGAGAALSYIPVQQFRTSCHGIAPPVTIRTAMPVYSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVVRKENPPAVKKEDCPAPAAPKEDPPTLSAPSPPTKESPAEVEQATTTVVNSQQETKTLENLEQLKI

Homology

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BLAST of Spg032613 vs. NCBI nr
Match: XP_004139447.1 (double-stranded RNA-binding protein 2 [Cucumis sativus] >KGN64845.1 hypothetical protein Csa_022785 [Cucumis sativus])

HSP 1 Score: 738.0 bits (1904), Expect = 4.3e-209
Identity = 390/415 (93.98%), Postives = 397/415 (95.66%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEK+AMSNPNATIPF KKLQIQ+PRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEGSGTRPQKFGAGAALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300
           PFSANKIPIPQSQTPALEGSG RPQKF AG ALSYIPVQQFRTSCHGIAPPVTIRTAMPV
Sbjct: 241 PFSANKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVVRKENPPAVKKEDCPAP 360
           +SAPPLPQPSKLPPQQVIRVPP+RIAPPVSIRQAIPVFAAPP VRKENPP VKKE+CPAP
Sbjct: 301 FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPP-VRKENPPVVKKEECPAP 360

Query: 361 AAPKEDPPTLSA------PSPPTKESPAEVEQATTTVVNSQQETKTLENLEQLKI 410
           AAPKEDPP LSA      PSPPT  S AEVEQAT TVVNS +ETKTLENLE+LKI
Sbjct: 361 AAPKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 414

[Close]

BLAST of Spg032613 vs. NCBI nr
Match: XP_022152917.1 (double-stranded RNA-binding protein 2-like [Momordica charantia])

HSP 1 Score: 734.2 bits (1894), Expect = 6.2e-208
Identity = 389/409 (95.11%), Postives = 393/409 (96.09%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEGSGTRPQKFGAGAALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300
           PFS NKI IPQSQTPALEGSGTRPQKF AGAALSYIPV QFRTSCHGIAPPVTIRT MPV
Sbjct: 241 PFSTNKISIPQSQTPALEGSGTRPQKFSAGAALSYIPVPQFRTSCHGIAPPVTIRTTMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVVRKENPPAVKKEDCPAP 360
           YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQA+PVFAAPP VRKENPP V+KED   P
Sbjct: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAVPVFAAPP-VRKENPPVVRKED--FP 360

Query: 361 AAPKEDPPTLSAPSPPTKESPAEVEQATTTVVNSQQETKTLENLEQLKI 410
           AAPKEDPP + APSPPT  SPAEVEQATT V NSQQE+KTLENLEQLKI
Sbjct: 361 AAPKEDPPVIPAPSPPT-TSPAEVEQATTAVANSQQESKTLENLEQLKI 405

[Close]

BLAST of Spg032613 vs. NCBI nr
Match: XP_008462570.1 (PREDICTED: double-stranded RNA-binding protein 2 [Cucumis melo] >KAA0041703.1 double-stranded RNA-binding protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 734.2 bits (1894), Expect = 6.2e-208
Identity = 388/413 (93.95%), Postives = 395/413 (95.64%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEK+AMSNPNATIPF KKLQIQ+PRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEGSGTRPQKFGAGAALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300
           PFSANKIPI QSQTP LEGSG RPQKF AG ALSYIPVQQFRTSCHGIAPPVTIRTAMPV
Sbjct: 241 PFSANKIPISQSQTPVLEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVVRKENPPAVKKEDCPAP 360
           +SAPPLPQPSKLPPQQVIRVPP+RIAPPVSIRQAIPVFAAPP VRKENPP VKKE+CPAP
Sbjct: 301 FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPP-VRKENPPVVKKEECPAP 360

Query: 361 AAPKEDPPTLSA----PSPPTKESPAEVEQATTTVVNSQQETKTLENLEQLKI 410
           AAPKEDPP LSA    PSPPT  S AEVEQAT TVVNS +ETKTLENLE+LKI
Sbjct: 361 AAPKEDPPALSAPVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 412

[Close]

BLAST of Spg032613 vs. NCBI nr
Match: XP_038894734.1 (double-stranded RNA-binding protein 2 [Benincasa hispida])

HSP 1 Score: 728.4 bits (1879), Expect = 3.4e-206
Identity = 391/430 (90.93%), Postives = 397/430 (92.33%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEK+AMSNPNATIPF KKLQIQ+PRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEGSGTRPQKFGAGAALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300
           PFSANKIPIPQSQTP LEGSGTR QKF AGAALSYIPVQQFRTSCHGIAPPVTIRTAMPV
Sbjct: 241 PFSANKIPIPQSQTPTLEGSGTRAQKFSAGAALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVVRKENPPAVKKEDCPAP 360
           YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPP VRKENPP VKKE+CPAP
Sbjct: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPP-VRKENPPVVKKEECPAP 360

Query: 361 AAPKEDPPTLSA------------PSPPTKE---------SPAEVEQATTTVVNSQQETK 410
           AAPK+DP  LSA            PSP T           SP EVE+AT+TVVNSQQETK
Sbjct: 361 AAPKDDPTALSASVPSPTTVSPPVPSPSTVSPPVPSLPTVSPPEVEEATSTVVNSQQETK 420

[Close]

BLAST of Spg032613 vs. NCBI nr
Match: KAG6583583.1 (Double-stranded RNA-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019284.1 Double-stranded RNA-binding protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 717.6 bits (1851), Expect = 6.0e-203
Identity = 386/414 (93.24%), Postives = 393/414 (94.93%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEGSGT-RPQKFGAG-AALSYIPVQQFRTSCHGIAPPVTIRTAM 300
           PFSANKIPIP +QT ALEGS T RPQKF AG AALSYIPV Q+RTSCHGIAPPVTIRT M
Sbjct: 241 PFSANKIPIPHAQTSALEGSATPRPQKFSAGAAALSYIPVHQYRTSCHGIAPPVTIRTTM 300

Query: 301 PVYSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVVRKENPPAVKKEDCP 360
           PVYSAPPLPQP KLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPP VRKEN PAVKKEDCP
Sbjct: 301 PVYSAPPLPQPLKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPP-VRKENAPAVKKEDCP 360

Query: 361 APAAPKED---PPTLSAPSPPTKESPAEVEQATTTVVNSQQETKTLENLEQLKI 410
           APAAPKE+   P  +  PSPPT ESPAEVEQ TTT+VNSQQETKTLENLE+LKI
Sbjct: 361 APAAPKENVAAPAPVPVPSPPT-ESPAEVEQDTTTLVNSQQETKTLENLEELKI 412

[Close]

BLAST of Spg032613 vs. ExPASy Swiss-Prot
Match: Q9SKN2 (Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE=1 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 2.4e-125
Identity = 270/411 (65.69%), Postives = 308/411 (74.94%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFE PQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLP+YTTFRSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           G VELAGITFTG+PAKNKKQAEKNAAMAAWS+LKQLAKE++SS  EPEN DELEQ+ IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRQKEKMAM-SNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSR 240
           AL+NYR KE +   S+ +A +PF KK  +Q+ RPTSPQ  PA TS+ILP IC K   RS 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 APFSANKIPIPQSQTPALEG-SGTRPQKFGAGAALSYIPVQQFRTSCHGIAPPVTIRTAM 300
               A    I +    ALE  S  RPQ+  A     Y+P++QFR+ CHG+APPVTIRTA+
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP--PYVPMRQFRSQCHGMAPPVTIRTAV 300

Query: 301 PVYSAPPLPQP-----SKLP-----PQQVIRVPPVRIAPPVSIRQAIPVFA-APPV-VRK 360
           PV+SAPP+P P     ++LP     P  +   PPVRIAPPV+IR A+PVFA APPV +R 
Sbjct: 301 PVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPVRIRT 360

Query: 361 ENPPAVKK-EDCPAPAAPKEDPPTLSAPSPPTKESPAEVEQATTTVVNSQQ 397
              P V+  E   +    KE  P L    P + E    VE +T T+ + ++
Sbjct: 361 AVKPTVEAGETRISSVQEKESIPVL----PDSLE--IGVEGSTITITDCEK 403

[Close]

BLAST of Spg032613 vs. ExPASy Swiss-Prot
Match: Q9AV50 (Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB6 PE=2 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 4.3e-111
Identity = 230/355 (64.79%), Postives = 264/355 (74.37%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLP+YTC+REGPDHAPRFKA VNFNGE FE P + +TLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPAYTCLREGPDHAPRFKAAVNFNGEQFESPGFFTTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL AL+ RGP +SLAARILDETGVYKNLLQE+AQRVGAPLP YTT RSGLGHLPVFT
Sbjct: 61  AEVALAALARRGPSYSLAARILDETGVYKNLLQEVAQRVGAPLPSYTTERSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
             VELAGITFTG+PAKNKKQAEKNAA AAWS+L+QL ++ ASSS+EPE+NDE EQI IAR
Sbjct: 121 CTVELAGITFTGDPAKNKKQAEKNAASAAWSSLRQLVRQEASSSNEPESNDEQEQIRIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTS-PQRPPAPTSKILPLICQKAAPRSR 240
           ALLNYR KEKMAM+N     PFPKK  +Q  R T+ PQ   +  SKILPL   K+  RSR
Sbjct: 181 ALLNYRLKEKMAMANNPHASPFPKKFPMQPERRTAFPQSSHSSYSKILPLFRPKSNSRSR 240

Query: 241 APFSANKIPIPQSQTPALEGSGTRPQ-KFGAGAALSYIPVQQFRTSCHGIAPPVTIRTAM 300
               A       SQTP        P+ +F A  A  Y+PV  FR  CH +APPVT+RT++
Sbjct: 241 PESPA--ASDAASQTPFRPTESPNPRSRFPAAEAAPYVPVGHFRMPCHSMAPPVTVRTSI 300

Query: 301 PVYSAPPLPQP----SKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVVRKENP 350
           PV+SAPPLP P     +LPP  +   PP+R+A PV IR A P+F  P  V+   P
Sbjct: 301 PVFSAPPLPPPGARTQQLPP-LMSHPPPIRMASPVRIRPAPPLF-TPSAVQGPKP 351

[Close]

BLAST of Spg032613 vs. ExPASy Swiss-Prot
Match: Q0DKP4 (Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB2 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.6e-71
Identity = 151/227 (66.52%), Postives = 170/227 (74.89%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGE FE P +CSTLR AEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALN LS RGP  SLAA++LDETG+YKNLLQE A R G  LP YTT RSG GH PVFT
Sbjct: 61  AEVALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAK--ESASSSSEPE-NNDELEQIT 180
             VELAG+TFTG P K KKQA+KNAAMAAWS LKQL +  E +SSS  P+ ++D+ EQI 
Sbjct: 121 CTVELAGMTFTGNPGKTKKQAQKNAAMAAWSELKQLPRVGEPSSSSCPPDHDDDDQEQII 180

Query: 181 IARALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTS 225
           +AR L +  Q      +N   T P  K+ Q  S RP+S +RP  P S
Sbjct: 181 VARTLASLNQ------TNGGKT-PQQKEKQQSSNRPSS-RRPSYPKS 219

[Close]

BLAST of Spg032613 vs. ExPASy Swiss-Prot
Match: Q8GY79 (Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=DRB5 PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 5.9e-68
Identity = 162/343 (47.23%), Postives = 204/343 (59.48%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEV+LN LS+R P  SL A+ILDETG+YKNLLQE A R G  LP YT+ RSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG+TFTGE AK KKQAEKNAA+AAWS+LK++       SS    ++E EQ  +AR
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKM-------SSLDSQDEEKEQEAVAR 180

Query: 181 ALLNYRQKE--------------KMAMSNPNATIPFPKKLQIQSPRPTS----------- 240
            L  ++ KE                  SN +  I   + + + + + +S           
Sbjct: 181 VLSRFKPKEVRRRETTNQWRRRTSQQDSNKDLLIERLRWINLLTNQASSSSSTSTPNQHK 240

Query: 241 --------PQRPPAPTSKILPLICQKAAPRSRAPFSANKIPIPQSQTPALEGSGTRPQKF 300
                   P  PP  +SKILP I Q     S+   +     +  S+    E S    ++ 
Sbjct: 241 NSSFISLIPPPPPPKSSKILPFIQQYKDRSSQEAKTETATEMINSKAKVNETSTRLSKQM 300

Query: 301 GAGAALSYIPVQQFRTSCHGIAPPVTIRTAMPVYSAPPLPQPS 311
                  Y  V     + + +AP V +R+ +PV++APP P+P+
Sbjct: 301 PFSDMNRYNFVGGCSVNPYSLAPAVQMRSVIPVFAAPP-PKPN 335

[Close]

BLAST of Spg032613 vs. ExPASy Swiss-Prot
Match: Q9LJF5 (Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE=1 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 5.5e-66
Identity = 164/351 (46.72%), Postives = 211/351 (60.11%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSYTC REGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL+ALS++GP  SL AR+LDETG+YKNLLQE A R G  LP YT+ RSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG++F GE AK KKQAEKNAA+AAW +L+++ +       +P   +E EQ  +AR
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR------LDPLRGEEKEQEIVAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
            L  +R KE +    PN +    ++  I++ R    Q     T+    L+C+K    +  
Sbjct: 181 VLSRFRPKE-VKRREPNQS---RRRTVIRTIR----QNTTTTTTTTGDLLCEKLRSINLY 240

Query: 241 PFSANKIPIPQSQTPALEGSGTRPQKFGAGAALSYIPVQQFRTSCHGIAPPVTIRTA--M 300
              A+    P  +      + T+ Q              + + S     P + I+T+   
Sbjct: 241 TNEASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDDPKPEMRIKTSSPS 300

Query: 301 PVYSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVVRKENP 350
           P+ S+      SKL P     +   ++AP V IR  IPV +APP     NP
Sbjct: 301 PLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPPPKPNPNP 337

[Close]

BLAST of Spg032613 vs. ExPASy TrEMBL
Match: A0A0A0LSF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132060 PE=4 SV=1)

HSP 1 Score: 738.0 bits (1904), Expect = 2.1e-209
Identity = 390/415 (93.98%), Postives = 397/415 (95.66%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEK+AMSNPNATIPF KKLQIQ+PRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEGSGTRPQKFGAGAALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300
           PFSANKIPIPQSQTPALEGSG RPQKF AG ALSYIPVQQFRTSCHGIAPPVTIRTAMPV
Sbjct: 241 PFSANKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVVRKENPPAVKKEDCPAP 360
           +SAPPLPQPSKLPPQQVIRVPP+RIAPPVSIRQAIPVFAAPP VRKENPP VKKE+CPAP
Sbjct: 301 FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPP-VRKENPPVVKKEECPAP 360

Query: 361 AAPKEDPPTLSA------PSPPTKESPAEVEQATTTVVNSQQETKTLENLEQLKI 410
           AAPKEDPP LSA      PSPPT  S AEVEQAT TVVNS +ETKTLENLE+LKI
Sbjct: 361 AAPKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 414

[Close]

BLAST of Spg032613 vs. ExPASy TrEMBL
Match: A0A5A7TEV1 (Double-stranded RNA-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G00360 PE=4 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 3.0e-208
Identity = 388/413 (93.95%), Postives = 395/413 (95.64%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEK+AMSNPNATIPF KKLQIQ+PRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEGSGTRPQKFGAGAALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300
           PFSANKIPI QSQTP LEGSG RPQKF AG ALSYIPVQQFRTSCHGIAPPVTIRTAMPV
Sbjct: 241 PFSANKIPISQSQTPVLEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVVRKENPPAVKKEDCPAP 360
           +SAPPLPQPSKLPPQQVIRVPP+RIAPPVSIRQAIPVFAAPP VRKENPP VKKE+CPAP
Sbjct: 301 FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPP-VRKENPPVVKKEECPAP 360

Query: 361 AAPKEDPPTLSA----PSPPTKESPAEVEQATTTVVNSQQETKTLENLEQLKI 410
           AAPKEDPP LSA    PSPPT  S AEVEQAT TVVNS +ETKTLENLE+LKI
Sbjct: 361 AAPKEDPPALSAPVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 412

[Close]

BLAST of Spg032613 vs. ExPASy TrEMBL
Match: A0A6J1DHJ7 (double-stranded RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC111020530 PE=4 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 3.0e-208
Identity = 389/409 (95.11%), Postives = 393/409 (96.09%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEGSGTRPQKFGAGAALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300
           PFS NKI IPQSQTPALEGSGTRPQKF AGAALSYIPV QFRTSCHGIAPPVTIRT MPV
Sbjct: 241 PFSTNKISIPQSQTPALEGSGTRPQKFSAGAALSYIPVPQFRTSCHGIAPPVTIRTTMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVVRKENPPAVKKEDCPAP 360
           YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQA+PVFAAPP VRKENPP V+KED   P
Sbjct: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAVPVFAAPP-VRKENPPVVRKED--FP 360

Query: 361 AAPKEDPPTLSAPSPPTKESPAEVEQATTTVVNSQQETKTLENLEQLKI 410
           AAPKEDPP + APSPPT  SPAEVEQATT V NSQQE+KTLENLEQLKI
Sbjct: 361 AAPKEDPPVIPAPSPPT-TSPAEVEQATTAVANSQQESKTLENLEQLKI 405

[Close]

BLAST of Spg032613 vs. ExPASy TrEMBL
Match: A0A1S3CHR7 (double-stranded RNA-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103500895 PE=4 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 3.0e-208
Identity = 388/413 (93.95%), Postives = 395/413 (95.64%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEK+AMSNPNATIPF KKLQIQ+PRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEGSGTRPQKFGAGAALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300
           PFSANKIPI QSQTP LEGSG RPQKF AG ALSYIPVQQFRTSCHGIAPPVTIRTAMPV
Sbjct: 241 PFSANKIPISQSQTPVLEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVVRKENPPAVKKEDCPAP 360
           +SAPPLPQPSKLPPQQVIRVPP+RIAPPVSIRQAIPVFAAPP VRKENPP VKKE+CPAP
Sbjct: 301 FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPP-VRKENPPVVKKEECPAP 360

Query: 361 AAPKEDPPTLSA----PSPPTKESPAEVEQATTTVVNSQQETKTLENLEQLKI 410
           AAPKEDPP LSA    PSPPT  S AEVEQAT TVVNS +ETKTLENLE+LKI
Sbjct: 361 AAPKEDPPALSAPVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 412

[Close]

BLAST of Spg032613 vs. ExPASy TrEMBL
Match: A0A6J1HYF1 (double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468613 PE=4 SV=1)

HSP 1 Score: 715.3 bits (1845), Expect = 1.4e-202
Identity = 379/410 (92.44%), Postives = 387/410 (94.39%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGE+FECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEVFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAK+SASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKQSASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKMAMSNPNATIPFPKKL IQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKMAMSNPNATIPFPKKLHIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEGSGTRPQKFGAGAALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300
           PFSANKI IPQS T A+EGSGT PQKF AGAALSYIPVQQFR SC GIAPPVTIRTAMPV
Sbjct: 241 PFSANKILIPQSPTSAVEGSGTCPQKFSAGAALSYIPVQQFRASCRGIAPPVTIRTAMPV 300

Query: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVVRKENPPAVKKEDCPAP 360
           YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIP FAAPP  RKE+PP +KKEDCPA 
Sbjct: 301 YSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPAFAAPP-ARKESPPVLKKEDCPAS 360

Query: 361 AAPKEDPPTLSAPSPPTKESPAEV-EQATTTVVNSQQETKTLENLEQLKI 410
            A KE+PP  SAPS PTK  PAEV EQATTT+ NSQQE KTLENLEQL+I
Sbjct: 361 TASKEEPPAPSAPSQPTKSPPAEVEEQATTTMANSQQEIKTLENLEQLQI 409

[Close]

BLAST of Spg032613 vs. TAIR 10
Match: AT2G28380.1 (dsRNA-binding protein 2 )

HSP 1 Score: 450.3 bits (1157), Expect = 1.7e-126
Identity = 270/411 (65.69%), Postives = 308/411 (74.94%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFE PQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLP+YTTFRSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           G VELAGITFTG+PAKNKKQAEKNAAMAAWS+LKQLAKE++SS  EPEN DELEQ+ IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRQKEKMAM-SNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSR 240
           AL+NYR KE +   S+ +A +PF KK  +Q+ RPTSPQ  PA TS+ILP IC K   RS 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 APFSANKIPIPQSQTPALEG-SGTRPQKFGAGAALSYIPVQQFRTSCHGIAPPVTIRTAM 300
               A    I +    ALE  S  RPQ+  A     Y+P++QFR+ CHG+APPVTIRTA+
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP--PYVPMRQFRSQCHGMAPPVTIRTAV 300

Query: 301 PVYSAPPLPQP-----SKLP-----PQQVIRVPPVRIAPPVSIRQAIPVFA-APPV-VRK 360
           PV+SAPP+P P     ++LP     P  +   PPVRIAPPV+IR A+PVFA APPV +R 
Sbjct: 301 PVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPVRIRT 360

Query: 361 ENPPAVKK-EDCPAPAAPKEDPPTLSAPSPPTKESPAEVEQATTTVVNSQQ 397
              P V+  E   +    KE  P L    P + E    VE +T T+ + ++
Sbjct: 361 AVKPTVEAGETRISSVQEKESIPVL----PDSLE--IGVEGSTITITDCEK 403

[Close]

BLAST of Spg032613 vs. TAIR 10
Match: AT5G41070.1 (dsRNA-binding protein 5 )

HSP 1 Score: 259.6 bits (662), Expect = 4.2e-69
Identity = 162/343 (47.23%), Postives = 204/343 (59.48%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEV+LN LS+R P  SL A+ILDETG+YKNLLQE A R G  LP YT+ RSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG+TFTGE AK KKQAEKNAA+AAWS+LK++       SS    ++E EQ  +AR
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKM-------SSLDSQDEEKEQEAVAR 180

Query: 181 ALLNYRQKE--------------KMAMSNPNATIPFPKKLQIQSPRPTS----------- 240
            L  ++ KE                  SN +  I   + + + + + +S           
Sbjct: 181 VLSRFKPKEVRRRETTNQWRRRTSQQDSNKDLLIERLRWINLLTNQASSSSSTSTPNQHK 240

Query: 241 --------PQRPPAPTSKILPLICQKAAPRSRAPFSANKIPIPQSQTPALEGSGTRPQKF 300
                   P  PP  +SKILP I Q     S+   +     +  S+    E S    ++ 
Sbjct: 241 NSSFISLIPPPPPPKSSKILPFIQQYKDRSSQEAKTETATEMINSKAKVNETSTRLSKQM 300

Query: 301 GAGAALSYIPVQQFRTSCHGIAPPVTIRTAMPVYSAPPLPQPS 311
                  Y  V     + + +AP V +R+ +PV++APP P+P+
Sbjct: 301 PFSDMNRYNFVGGCSVNPYSLAPAVQMRSVIPVFAAPP-PKPN 335

[Close]

BLAST of Spg032613 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 )

HSP 1 Score: 253.1 bits (645), Expect = 3.9e-67
Identity = 164/351 (46.72%), Postives = 211/351 (60.11%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSYTC REGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL+ALS++GP  SL AR+LDETG+YKNLLQE A R G  LP YT+ RSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG++F GE AK KKQAEKNAA+AAW +L+++ +       +P   +E EQ  +AR
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR------LDPLRGEEKEQEIVAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
            L  +R KE +    PN +    ++  I++ R    Q     T+    L+C+K    +  
Sbjct: 181 VLSRFRPKE-VKRREPNQS---RRRTVIRTIR----QNTTTTTTTTGDLLCEKLRSINLY 240

Query: 241 PFSANKIPIPQSQTPALEGSGTRPQKFGAGAALSYIPVQQFRTSCHGIAPPVTIRTA--M 300
              A+    P  +      + T+ Q              + + S     P + I+T+   
Sbjct: 241 TNEASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDDPKPEMRIKTSSPS 300

Query: 301 PVYSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVVRKENP 350
           P+ S+      SKL P     +   ++AP V IR  IPV +APP     NP
Sbjct: 301 PLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPPPKPNPNP 337

[Close]

BLAST of Spg032613 vs. TAIR 10
Match: AT3G26932.2 (dsRNA-binding protein 3 )

HSP 1 Score: 253.1 bits (645), Expect = 3.9e-67
Identity = 164/351 (46.72%), Postives = 211/351 (60.11%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSYTC REGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL+ALS++GP  SL AR+LDETG+YKNLLQE A R G  LP YT+ RSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG++F GE AK KKQAEKNAA+AAW +L+++ +       +P   +E EQ  +AR
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR------LDPLRGEEKEQEIVAR 180

Query: 181 ALLNYRQKEKMAMSNPNATIPFPKKLQIQSPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
            L  +R KE +    PN +    ++  I++ R    Q     T+    L+C+K    +  
Sbjct: 181 VLSRFRPKE-VKRREPNQS---RRRTVIRTIR----QNTTTTTTTTGDLLCEKLRSINLY 240

Query: 241 PFSANKIPIPQSQTPALEGSGTRPQKFGAGAALSYIPVQQFRTSCHGIAPPVTIRTA--M 300
              A+    P  +      + T+ Q              + + S     P + I+T+   
Sbjct: 241 TNEASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDDPKPEMRIKTSSPS 300

Query: 301 PVYSAPPLPQPSKLPPQQVIRVPPVRIAPPVSIRQAIPVFAAPPVVRKENP 350
           P+ S+      SKL P     +   ++AP V IR  IPV +APP     NP
Sbjct: 301 PLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPPPKPNPNP 337

[Close]

BLAST of Spg032613 vs. TAIR 10
Match: AT3G62800.1 (double-stranded-RNA-binding protein 4 )

HSP 1 Score: 126.3 bits (316), Expect = 5.5e-29
Identity = 73/172 (42.44%), Postives = 96/172 (55.81%), Query Frame = 0


Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           +YK QLQ  A +    LP Y   REGP HAPRF+  V F G+ F+  ++  TL+ AEH+A
Sbjct: 4   VYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAA 63

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           A++A+ +L+ + P     A        YKNLLQEIAQ+  + LP Y T  SG  H P FT
Sbjct: 64  AKIAVASLTPQSPEGIDVA--------YKNLLQEIAQKESSLLPFYATATSGPSHAPTFT 123

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDE 173
             VE AG  F+GE AK KK AE +AA  A+ ++K        S + P    E
Sbjct: 124 STVEFAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPSERQE 167

The following BLAST results are available for this feature:

BLAST of Spg032613 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139447.1	4.3e-209	93.98	double-stranded RNA-binding protein 2 [Cucumis sativus] >KGN64845.1 hypothetical...	[more]
XP_022152917.1	6.2e-208	95.11	double-stranded RNA-binding protein 2-like [Momordica charantia]	[more]
XP_008462570.1	6.2e-208	93.95	PREDICTED: double-stranded RNA-binding protein 2 [Cucumis melo] >KAA0041703.1 do...	[more]
XP_038894734.1	3.4e-206	90.93	double-stranded RNA-binding protein 2 [Benincasa hispida]	[more]
KAG6583583.1	6.0e-203	93.24	Double-stranded RNA-binding protein 2, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of Spg032613 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKN2	2.4e-125	65.69	Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=DRB2 PE...	[more]
Q9AV50	4.3e-111	64.79	Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q0DKP4	2.6e-71	66.52	Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q8GY79	5.9e-68	47.23	Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=DRB5 PE...	[more]
Q9LJF5	5.5e-66	46.72	Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE...	[more]

BLAST of Spg032613 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSF2	2.1e-209	93.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132060 PE=4 SV=1	[more]
A0A5A7TEV1	3.0e-208	93.95	Double-stranded RNA-binding protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1DHJ7	3.0e-208	95.11	double-stranded RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A1S3CHR7	3.0e-208	93.95	double-stranded RNA-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103500895 PE...	[more]
A0A6J1HYF1	1.4e-202	92.44	double-stranded RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Spg032613 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28380.1	1.7e-126	65.69	dsRNA-binding protein 2	[more]
AT5G41070.1	4.2e-69	47.23	dsRNA-binding protein 5	[more]
AT3G26932.1	3.9e-67	46.72	dsRNA-binding protein 3	[more]
AT3G26932.2	3.9e-67	46.72	dsRNA-binding protein 3	[more]
AT3G62800.1	5.5e-29	42.44	double-stranded-RNA-binding protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 88..154 e-value: 2.8E-19 score: 80.1 coord: 2..69 e-value: 1.5E-20 score: 84.3
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 88..152 e-value: 1.5E-11 score: 44.9 coord: 2..68 e-value: 6.7E-16 score: 58.8
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 87..155 score: 10.994328
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 1..70 score: 11.892551
None	No IPR available	GENE3D	3.30.160.20		coord: 1..68 e-value: 8.6E-23 score: 82.4
None	No IPR available	GENE3D	3.30.160.20		coord: 81..155 e-value: 2.2E-20 score: 74.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 381..402
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 345..409
None	No IPR available	PANTHER	PTHR46031:SF7	DOUBLE-STRANDED RNA-BINDING PROTEIN 2-LIKE	coord: 1..404
None	No IPR available	PANTHER	PTHR46031	FAMILY NOT NAMED	coord: 1..404
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 88..158
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 2..68
IPR044451	AtDRB-like, second double-stranded RNA binding domain, plant	CDD	cd19908	DSRM_AtDRB-like_rpt2	coord: 86..154 e-value: 9.13671E-38 score: 129.136
IPR044450	AtDRB-like, first double-stranded RNA binding domain, plant	CDD	cd19907	DSRM_AtDRB-like_rpt1	coord: 1..69 e-value: 4.18323E-42 score: 140.689

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg032613.1	Spg032613.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0070919	production of siRNA involved in gene silencing by small RNA
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003725	double-stranded RNA binding