Spg031746 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg031746
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold11: 36445054 .. 36446936 (+)
RNA-Seq Expression	Spg031746
Synteny	Spg031746

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACCAGGAAACCGACCCAGCAGAAGACCAGACCAAAGGGTCGGGCCATGGTCTGCCTCGGCCTGCGCGGGCCAAAATCGTTCGCCTCCGCTCGGTCCATGCTGCCTCTGGCAGCTCCGGTTCCGCCTGGTTAGTCCCAAAACGCCTCCGAATTCCTAACGAAAGACACAGGTATGGGGTCTCCTACACCCAGAAAAGGGGTTCGAAATCTATTTTCCAGAGATTCTCTTAACTGTTTATCTAACTTAAGCATCGGAGTGCAGGTGGCCTACACCACAGCGGTGTGCAGCGGTTCTTACTGGTCTTGTAGGTCACGTCTTCCTCGTCCACAACAAATTCACTACTAGTGTCACGTGAAGGTCGAGTGAGTTGCTTGGCCAAATTTTGGCATCAACAATATATATATTTAAAAAATTAAAAAAAAAATTAAAAAAAAAAAAGTGTTTTTTGAAAGTGTTTTGTGAAGGAATGGTTTCACGTGTAAGGTCGGAGAGGACGGTGAGGGAGCGTGCGCCATGTGCTTTGTTGCAGTATGAGACCACTCCTTATTATATTCTTTTTTTTTTTTAATTATATTATTATTGTTATTGTTATTAATATTTATATTATTATTATTATAATATTAATGATTTTAGATAAGAATAAAAAGTTGTGTTGCTCATCCTCCGGATCTTGCCTTCTCTTTTCTCTCTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTTCTTTTCTCTCTCTAAAGTTTTGCTATATATTCTCACCCATTTCACTTCCAACCCTTTTCAGCTCAAGCACATTCTCTAGTATCGTCATCGCTTCGTATCGCTATGGCTTCTTGGAAGAAAACCATCATTTCTCCCTTTCGAAAGGCTTGCACCATCTTCAACCAGAACCCGAGAGACCACAAAAAGTCTCACTCTGACTCAGGTGAGAACCTCTCGAGTTTTGTTTTTAATTTTCAACAAGGATATGTTTGAAAGTGATTTTGAAATATTGGTTCAAAATTAATCACTCTTTTCGTGTTTAAAATCATTCTGAAACATGTTTTTCATCATTACAAAGAACGTTGGCTTTGTTTTTTTAGAAAAATCTCTTTTGTTAACAACGTCAATTTAAACATAACTTGAAAGTCAATATCTTGTTTTAATTGGGATATATTTCACAGAGCAAGAGAAGCGAGTGGACGTGAGAGATCTGCAAGGAGAGGTGATGGCGTGTGGGTACGAAGACGTGCACGTGATGTGGTCCATTTTAGACAAGGCCAACTCAACTGCCGCCACCACTGCCACCGCCTGTAATGTGTCGTCTTAACCGTCGCCACCGCCACCGACGCCACGATGTCGGTCGCCTAATTGCTGTAGATAAAGCATAATACATCTCTCTCTCTATGTTATCATGATTTTGTTATGTGTAGGGAATGAATCCCCATGATTTGAAGCTCTTAATCATGGTGAGATTTAAGATTTTTATTATTACTCTTAAATCTTAATTATTAATGCAAAAACTAAATCTCTTTTCTTTCTCTCTCTCTCTTTCTGGGGAATTGAGCCTTATCTCTGAAAACAAGAGGCTTAGATCTGATTGGTTGGTCATATTTAGTTATACTTTTATATGTACCACTTTTCAAGATGTCAAGGGCTGAATTTGAGAGAGAATGAAAGAAACTTGGGTTTTTTTAGATTTTTTTTTTTTAACTCTTTTTGTAAATTATACTTATTATAGTTAAATCTTTTTCTTTAGATTTAAATTCTATTTTGTTTCTTGTAAGTTAATGATAGCAAAACTTGACATGACATCAAGTTTTAATCATGTGCTTTATGAATAGATATGTTTACGACAGACAATTTTGGAGTTTTGAATCGTGTGATTAGACG

mRNA sequence

ATGGGACCAGGAAACCGACCCAGCAGAAGACCAGACCAAAGGGTCGGGCCATGGTCTGCCTCGGCCTGCGCGGGCCAAAATCGTTCGCCTCCGCTCGGTCCATGCTGCCTCTGGCAGCTCCGGTTCCGCCTGGTGGCCTACACCACAGCGGTGTGCAGCGGTTCTTACTGGTCTTGTAGGTCACGTCTTCCTCCTCAAGCACATTCTCTAGTATCGTCATCGCTTCGTATCGCTATGGCTTCTTGGAAGAAAACCATCATTTCTCCCTTTCGAAAGGCTTGCACCATCTTCAACCAGAACCCGAGAGACCACAAAAAGTCTCACTCTGACTCAGAGCAAGAGAAGCGAGTGGACGTGAGAGATCTGCAAGGAGAGGTGATGGCGTGTGGGTACGAAGACGTGCACGTGATGTGGTCCATTTTAGACAAGGCCAACTCAACTGCCGCCACCACTGCCACCGCCTGTAATGTGTCGTCTTAA

Coding sequence (CDS)

ATGGGACCAGGAAACCGACCCAGCAGAAGACCAGACCAAAGGGTCGGGCCATGGTCTGCCTCGGCCTGCGCGGGCCAAAATCGTTCGCCTCCGCTCGGTCCATGCTGCCTCTGGCAGCTCCGGTTCCGCCTGGTGGCCTACACCACAGCGGTGTGCAGCGGTTCTTACTGGTCTTGTAGGTCACGTCTTCCTCCTCAAGCACATTCTCTAGTATCGTCATCGCTTCGTATCGCTATGGCTTCTTGGAAGAAAACCATCATTTCTCCCTTTCGAAAGGCTTGCACCATCTTCAACCAGAACCCGAGAGACCACAAAAAGTCTCACTCTGACTCAGAGCAAGAGAAGCGAGTGGACGTGAGAGATCTGCAAGGAGAGGTGATGGCGTGTGGGTACGAAGACGTGCACGTGATGTGGTCCATTTTAGACAAGGCCAACTCAACTGCCGCCACCACTGCCACCGCCTGTAATGTGTCGTCTTAA

Protein sequence

MGPGNRPSRRPDQRVGPWSASACAGQNRSPPLGPCCLWQLRFRLVAYTTAVCSGSYWSCRSRLPPQAHSLVSSSLRIAMASWKKTIISPFRKACTIFNQNPRDHKKSHSDSEQEKRVDVRDLQGEVMACGYEDVHVMWSILDKANSTAATTATACNVSS

Homology

[Close]

BLAST of Spg031746 vs. NCBI nr
Match: XP_022138108.1 (uncharacterized protein LOC111009357 [Momordica charantia])

HSP 1 Score: 149.8 bits (377), Expect = 2.0e-32
Identity = 81/102 (79.41%), Postives = 85/102 (83.33%), Query Frame = 0


Query: 61  SRLPPQAHSLVSSSLRIA---MASWKKTIISPFRKACTIFNQNPRDHKKSHSDSEQEKRV 120
           S + P+ H L  + + I    MASWKKTIISPFRKACTIFNQ PRD KKSHSDSEQEKRV
Sbjct: 37  SPISPKLHILELTIIIIVLLLMASWKKTIISPFRKACTIFNQQPRDPKKSHSDSEQEKRV 96

Query: 121 DVRDLQGEVMACGYEDVHVMWSILDKANSTAATTATACNVSS 160
           DVRDLQGEVMACGYEDVHVMWSILDKANS AA TA ACNVSS
Sbjct: 97  DVRDLQGEVMACGYEDVHVMWSILDKANSGAAATA-ACNVSS 137

[Close]

BLAST of Spg031746 vs. NCBI nr
Match: XP_038898749.1 (uncharacterized protein LOC120086267 [Benincasa hispida])

HSP 1 Score: 145.6 bits (366), Expect = 3.7e-31
Identity = 72/81 (88.89%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 79  MASWKKTIISPFRKACTIFNQNPRDHKKSHSDSEQEKRVDVRDLQGEVMACGYEDVHVMW 138
           MASWKKTIISPFRKACTIFNQN RD KKSHSDSEQEKRVDVR+LQGEVMACGYEDVHVMW
Sbjct: 1   MASWKKTIISPFRKACTIFNQNTRDPKKSHSDSEQEKRVDVRNLQGEVMACGYEDVHVMW 60

Query: 139 SILDKANSTAATTATACNVSS 160
           SILDKANS A  T   CNVSS
Sbjct: 61  SILDKANSIATATTITCNVSS 81

[Close]

BLAST of Spg031746 vs. NCBI nr
Match: XP_008439007.1 (PREDICTED: uncharacterized protein LOC103483930 isoform X3 [Cucumis melo] >KAA0052144.1 uncharacterized protein E6C27_scaffold1589G00140 [Cucumis melo var. makuwa] >TYK30595.1 uncharacterized protein E5676_scaffold60158G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 145.2 bits (365), Expect = 4.8e-31
Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 79  MASWKKTIISPFRKACTIFNQNPRDHKKSHSDSEQEKRVDVRDLQGEVMACGYEDVHVMW 138
           MASWKKTIISPFRKACTIFNQNPRD KKSHSDSEQEKRVDVR+LQGEVMACGYEDVHVMW
Sbjct: 1   MASWKKTIISPFRKACTIFNQNPRDPKKSHSDSEQEKRVDVRNLQGEVMACGYEDVHVMW 60

Query: 139 SILDKANSTAATTATA-CNVSS 160
           SILD   ++AATTATA CNVSS
Sbjct: 61  SILDHKANSAATTATATCNVSS 82

[Close]

BLAST of Spg031746 vs. NCBI nr
Match: XP_022980000.1 (uncharacterized protein LOC111479526 [Cucurbita maxima] >XP_023527753.1 uncharacterized protein LOC111790878 [Cucurbita pepo subsp. pepo] >KAG6582137.1 hypothetical protein SDJN03_22139, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144.8 bits (364), Expect = 6.3e-31
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 79  MASWKKTIISPFRKACTIFNQNPRDHKKSHSDSEQEKRVDVRDLQGEVMACGYEDVHVMW 138
           MASWKKTIISPFRKACTIFNQ+PRD KKS SDSEQEKRVDVR+LQGEVMACGYEDVHVMW
Sbjct: 1   MASWKKTIISPFRKACTIFNQHPRDPKKSPSDSEQEKRVDVRNLQGEVMACGYEDVHVMW 60

Query: 139 SILDKANSTAATTATACNVSS 160
           SILDKANST  T ATACNVSS
Sbjct: 61  SILDKANST-TTAATACNVSS 80

[Close]

BLAST of Spg031746 vs. NCBI nr
Match: XP_004147637.1 (uncharacterized protein LOC101206709 [Cucumis sativus] >KGN57215.1 hypothetical protein Csa_010169 [Cucumis sativus])

HSP 1 Score: 144.4 bits (363), Expect = 8.2e-31
Identity = 75/83 (90.36%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 79  MASWKKTIISPFRKACTIFNQNPRDH-KKSHSDSEQEKRVDVRDLQGEVMACGYEDVHVM 138
           MASWKKTIISPFRKACTIFNQNPRDH KKSHSDSEQEKRVDVR+LQGEVMACGYEDVHVM
Sbjct: 1   MASWKKTIISPFRKACTIFNQNPRDHPKKSHSDSEQEKRVDVRNLQGEVMACGYEDVHVM 60

Query: 139 WSILDKANSTAATTATA-CNVSS 160
           WSILD   ++AATTATA CNVSS
Sbjct: 61  WSILDHKANSAATTATATCNVSS 83

[Close]

BLAST of Spg031746 vs. ExPASy TrEMBL
Match: A0A6J1CC51 (uncharacterized protein LOC111009357 OS=Momordica charantia OX=3673 GN=LOC111009357 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 9.4e-33
Identity = 81/102 (79.41%), Postives = 85/102 (83.33%), Query Frame = 0


Query: 61  SRLPPQAHSLVSSSLRIA---MASWKKTIISPFRKACTIFNQNPRDHKKSHSDSEQEKRV 120
           S + P+ H L  + + I    MASWKKTIISPFRKACTIFNQ PRD KKSHSDSEQEKRV
Sbjct: 37  SPISPKLHILELTIIIIVLLLMASWKKTIISPFRKACTIFNQQPRDPKKSHSDSEQEKRV 96

Query: 121 DVRDLQGEVMACGYEDVHVMWSILDKANSTAATTATACNVSS 160
           DVRDLQGEVMACGYEDVHVMWSILDKANS AA TA ACNVSS
Sbjct: 97  DVRDLQGEVMACGYEDVHVMWSILDKANSGAAATA-ACNVSS 137

[Close]

BLAST of Spg031746 vs. ExPASy TrEMBL
Match: A0A5A7U9W0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold60158G00010 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 2.3e-31
Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 79  MASWKKTIISPFRKACTIFNQNPRDHKKSHSDSEQEKRVDVRDLQGEVMACGYEDVHVMW 138
           MASWKKTIISPFRKACTIFNQNPRD KKSHSDSEQEKRVDVR+LQGEVMACGYEDVHVMW
Sbjct: 1   MASWKKTIISPFRKACTIFNQNPRDPKKSHSDSEQEKRVDVRNLQGEVMACGYEDVHVMW 60

Query: 139 SILDKANSTAATTATA-CNVSS 160
           SILD   ++AATTATA CNVSS
Sbjct: 61  SILDHKANSAATTATATCNVSS 82

[Close]

BLAST of Spg031746 vs. ExPASy TrEMBL
Match: A0A1S3AXS6 (uncharacterized protein LOC103483930 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483930 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 2.3e-31
Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 79  MASWKKTIISPFRKACTIFNQNPRDHKKSHSDSEQEKRVDVRDLQGEVMACGYEDVHVMW 138
           MASWKKTIISPFRKACTIFNQNPRD KKSHSDSEQEKRVDVR+LQGEVMACGYEDVHVMW
Sbjct: 1   MASWKKTIISPFRKACTIFNQNPRDPKKSHSDSEQEKRVDVRNLQGEVMACGYEDVHVMW 60

Query: 139 SILDKANSTAATTATA-CNVSS 160
           SILD   ++AATTATA CNVSS
Sbjct: 61  SILDHKANSAATTATATCNVSS 82

[Close]

BLAST of Spg031746 vs. ExPASy TrEMBL
Match: A0A6J1IUX8 (uncharacterized protein LOC111479526 OS=Cucurbita maxima OX=3661 GN=LOC111479526 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 3.0e-31
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 79  MASWKKTIISPFRKACTIFNQNPRDHKKSHSDSEQEKRVDVRDLQGEVMACGYEDVHVMW 138
           MASWKKTIISPFRKACTIFNQ+PRD KKS SDSEQEKRVDVR+LQGEVMACGYEDVHVMW
Sbjct: 1   MASWKKTIISPFRKACTIFNQHPRDPKKSPSDSEQEKRVDVRNLQGEVMACGYEDVHVMW 60

Query: 139 SILDKANSTAATTATACNVSS 160
           SILDKANST  T ATACNVSS
Sbjct: 61  SILDKANST-TTAATACNVSS 80

[Close]

BLAST of Spg031746 vs. ExPASy TrEMBL
Match: A0A0A0L5H1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171230 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 4.0e-31
Identity = 75/83 (90.36%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 79  MASWKKTIISPFRKACTIFNQNPRDH-KKSHSDSEQEKRVDVRDLQGEVMACGYEDVHVM 138
           MASWKKTIISPFRKACTIFNQNPRDH KKSHSDSEQEKRVDVR+LQGEVMACGYEDVHVM
Sbjct: 1   MASWKKTIISPFRKACTIFNQNPRDHPKKSHSDSEQEKRVDVRNLQGEVMACGYEDVHVM 60

Query: 139 WSILDKANSTAATTATA-CNVSS 160
           WSILD   ++AATTATA CNVSS
Sbjct: 61  WSILDHKANSAATTATATCNVSS 83

[Close]

BLAST of Spg031746 vs. TAIR 10
Match: AT1G48330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits to 40 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 4.2e-17
Identity = 44/71 (61.97%), Postives = 53/71 (74.65%), Query Frame = 0


Query: 79  MASWKKTIISPFRKACTIFN--QNPRDHKKSHSDSEQEKRVDVRDLQGEVMACGYEDVHV 138
           MASWKKTI +PF+KA T FN  Q    H  + +  E EKR  V++LQG+VMACGYEDV V
Sbjct: 1   MASWKKTIATPFKKAATFFNQPQQTNRHANAKAREEHEKRT-VQELQGDVMACGYEDVLV 60

Query: 139 MWSILDKANST 148
           MWSILDK+NS+
Sbjct: 61  MWSILDKSNSS 70

[Close]

BLAST of Spg031746 vs. TAIR 10
Match: AT3G17580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48330.1); Has 40 Blast hits to 40 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.1 bits (209), Expect = 5.5e-17
Identity = 45/76 (59.21%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 79  MASWKKTIISPFRKACTIFNQNPRDHKK-------SHSDSEQEKRVDVRDLQGEVMACGY 138
           MASWKKTI +PF+KA T FNQ  +  KK       + +  E EKR+ V++LQGEVMACGY
Sbjct: 1   MASWKKTIATPFKKAATFFNQPQQSPKKGCRGRMDAQAREEHEKRM-VQELQGEVMACGY 60

Query: 139 EDVHVMWSILDKANST 148
           +DV VMWSILDK+NS+
Sbjct: 61  DDVLVMWSILDKSNSS 75

The following BLAST results are available for this feature:

BLAST of Spg031746 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138108.1	2.0e-32	79.41	uncharacterized protein LOC111009357 [Momordica charantia]	[more]
XP_038898749.1	3.7e-31	88.89	uncharacterized protein LOC120086267 [Benincasa hispida]	[more]
XP_008439007.1	4.8e-31	90.24	PREDICTED: uncharacterized protein LOC103483930 isoform X3 [Cucumis melo] >KAA00...	[more]
XP_022980000.1	6.3e-31	91.36	uncharacterized protein LOC111479526 [Cucurbita maxima] >XP_023527753.1 uncharac...	[more]
XP_004147637.1	8.2e-31	90.36	uncharacterized protein LOC101206709 [Cucumis sativus] >KGN57215.1 hypothetical ...	[more]

BLAST of Spg031746 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg031746 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CC51	9.4e-33	79.41	uncharacterized protein LOC111009357 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A5A7U9W0	2.3e-31	90.24	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AXS6	2.3e-31	90.24	uncharacterized protein LOC103483930 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1IUX8	3.0e-31	91.36	uncharacterized protein LOC111479526 OS=Cucurbita maxima OX=3661 GN=LOC111479526...	[more]
A0A0A0L5H1	4.0e-31	90.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171230 PE=4 SV=1	[more]

BLAST of Spg031746 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48330.1	4.2e-17	61.97	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G17580.1	5.5e-17	59.21	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR33181	OS01G0778500 PROTEIN	coord: 79..150
None	No IPR available	PANTHER	PTHR33181:SF43	SUBFAMILY NOT NAMED	coord: 79..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg031746.1	Spg031746.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane