Spg031707 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg031707
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	60S ribosomal protein L37a
Location	scaffold11: 41893361 .. 41895423 (-)
RNA-Seq Expression	Spg031707
Synteny	Spg031707

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTACTTCCTCCTCTGTTTTTCATGTTTTCATGTACTACGTTGTTGTTTCTGGATTCTTGAAGCTTTTTGGAAGTTTTGAAGGCGAGAGATTATGTTTTGTAGTCCGTAGGATTTAATTTGTGGGGGGAGATTAATGACTCGAATCGAAAAACGCGAGGTTTTTTCTTCTGGTAAGCGAAATATTGGAAAGGGAAATAGATCATTAGTTCGCTCTGTGGTAGTGGATTATCGATTCGATTTCATGGATCTCACGTAGTTAAAGCGATTCAAGATACTCTGTTTCTCATAAATTTGCGATATCTTCATTATTCACCGTGTTTCTACCTTCAACTCTATTCGAAAAGAGAATAGAAGAGATTTTAAGAGAACTTCTACTTTAGCGAGACTTTACATCGAAACTTTTTTTTTTCTTTATTATACTTATTCTAGAGCGATTATAATATTTCTCTAAGTTGTGTTTGTTTCAATTTCCCGTATAATCGCAGACGAAGAGAACCAAGAAGGCTGGCATCGTCGGCAAGTACGGTATGTGATAGTATCTTTTGCTCTTATTAACAGTGAATTAGAATTTGTACTCATTATATTAGAGCGACGAGTGAAAGTGGATTTGTGGATTGAAAGAGATCCTTGTCCCTCTCATAATTTCGAATGTAGAGGTTCCTTCAATGGTATTCATAGATGGTTTGATTGACCGTGCTATAATGTTTAAAGCAATTGGTAGCTTAAGAGTCTGCTTCATTTGCTGAGTGAAGACTTATAATAAACTTTTACGTACATTGTGCTGCATAGTTATGTATATAATTCGTTTATACGGTGTCTTCTTGTAACAGGTACCAGATATGGTGCCAGTCTGAGGAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGCGAGTTCTGCGGAAAGGTAAGTTTCTTTATTCAGAATTAACTTCATTGATATTTGGTGGTTACTGGTAGTTCCATGACAATGCTAGAGTTTACATGAACTGAAAGAAATTAGATGTTGGTCTTGATGGGAATGGTCTAGGTTTCAATGACATGGAGATATGGGTATTAATGAATGTTCCTTAAAAAATGTAATGTTATTGGATTGATAGACTTTTTTTTTCCAATTTATAGAAACTTACATACTATTAGTATTCATGTTCATATTGGTGATATTTTTGTTATAGTAATTGAAATTTCTGATAAATCGTTGACATTTCTACTGAAATCATATAACTTTTGGAAATGTGATGAAATATACATACATATTGATTGTTGTTTCAAACCCTTGTGTCGTGCCATGAAAAGGAAGGCTTTTGAGATTTGGATTGGGAAATAAGTTACCTTTTCACTTCATACACAATAACTTAATATTATTATTTATATTCTTACTTGTGACATTTTCATCTATAGTTCTTGAAACTTTTGATGAACTGTTGAATTTTCTACCGTATTTCACAAATGTCAACGTTAAACCATAGAACTCTTATGGAAATGTAATGAAAACTTCCACATTTTCCGCACGAATTTGATTGGATGATTATAATCAAATGATTGCTGTTTCAAACTCTTACAGTATGCCGTGAAGAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGTGGAAAGGTGAAGGCCGGAGGTGCCTACACATTGAAGTGAGTACAGTTGATTCTTGTTTTGCAATGATGATATCTCTGTGCATTCAAATCCAATTCAAGGCTTTAATTCTGTTTCTTTGTTTTGCTTTGGACAGCACTGCAAGTGCAGTGACCGTTAGGAGCACAATCCGAAGGTTGAGGGAGCAGACTGAGAGTTAAGTTTGATTTAGATTTTGTTTTTGTTCTGTCTTGAGTTATTACTGTTTTGACAGTGTAGAGTTTTTGGAAGAAGATTGTTGGAAGCAGTTTGAGTACCCATTTGACTTCATTTCAAGTTGAGACTCCAGAGCTTTTAAACTAGCTCTGCTTTTTTAGCCAGATTATTTTTAATTATCCCGGATTTTTGAGACTGCAACAACTGCAACAATTTTCTTGCTTTCAAATATGGGTTTTTTGGG

mRNA sequence

ATGGTACTTCCTCCTCTGTTTTTCATGTTTTCATGTACCAGATATGGTGCCAGTCTGAGGAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGCGAGTTCTGCGGAAAGTATGCCGTGAAGAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGTGGAAAGGTGAAGGCCGGAGGTGCCTACACATTGAACACTGCAAGTGCAGTGACCGTTAGGAGCACAATCCGAAGGTTGAGGGAGCAGACTGAGAGTTAA

Coding sequence (CDS)

ATGGTACTTCCTCCTCTGTTTTTCATGTTTTCATGTACCAGATATGGTGCCAGTCTGAGGAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGCGAGTTCTGCGGAAAGTATGCCGTGAAGAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGTGGAAAGGTGAAGGCCGGAGGTGCCTACACATTGAACACTGCAAGTGCAGTGACCGTTAGGAGCACAATCCGAAGGTTGAGGGAGCAGACTGAGAGTTAA

Protein sequence

MVLPPLFFMFSCTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Homology

[Close]

BLAST of Spg031707 vs. NCBI nr
Match: KAG2381106.1 (60S ribosomal protein [Vigna angularis])

HSP 1 Score: 161.8 bits (408), Expect = 2.8e-36
Identity = 78/80 (97.50%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 10  FSCTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLN 69
           F CTRYGASLRKQIKKMEVSQHSK+FCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLN
Sbjct: 132 FPCTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLN 191

Query: 70  TASAVTVRSTIRRLREQTES 90
           TASAVTVRSTIRRLREQTES
Sbjct: 192 TASAVTVRSTIRRLREQTES 211

[Close]

BLAST of Spg031707 vs. NCBI nr
Match: PHT96159.1 (60S ribosomal protein L37a [Capsicum annuum])

HSP 1 Score: 161.4 bits (407), Expect = 3.6e-36
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 12  CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTA 71
           CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTA
Sbjct: 73  CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTA 132

Query: 72  SAVTVRSTIRRLREQTES 90
           SAVTVRSTIRRLREQTES
Sbjct: 133 SAVTVRSTIRRLREQTES 150

[Close]

BLAST of Spg031707 vs. NCBI nr
Match: KAA3469158.1 (60S ribosomal protein L37a isoform X1 [Gossypium australe])

HSP 1 Score: 161.4 bits (407), Expect = 3.6e-36
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 12 CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTA 71
          CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTA
Sbjct: 19 CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTA 78

Query: 72 SAVTVRSTIRRLREQTES 90
          SAVTVRSTIRRLREQTES
Sbjct: 79 SAVTVRSTIRRLREQTES 96

[Close]

BLAST of Spg031707 vs. NCBI nr
Match: KAF5961329.1 (hypothetical protein HYC85_002538 [Camellia sinensis])

HSP 1 Score: 161.0 bits (406), Expect = 4.7e-36
Identity = 81/88 (92.05%), Postives = 82/88 (93.18%), Query Frame = 0


Query: 2   VLPPLFFMFSCTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVK 61
           +LP     FS TRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVK
Sbjct: 66  LLPLSRLCFSGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVK 125

Query: 62  AGGAYTLNTASAVTVRSTIRRLREQTES 90
           AGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 126 AGGAYTLNTASAVTVRSTIRRLREQTES 153

[Close]

BLAST of Spg031707 vs. NCBI nr
Match: PPR98408.1 (hypothetical protein GOBAR_AA22262 [Gossypium barbadense])

HSP 1 Score: 161.0 bits (406), Expect = 4.7e-36
Identity = 77/78 (98.72%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 12  CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTA 71
           CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK+KAGGAYTLNTA
Sbjct: 91  CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKIKAGGAYTLNTA 150

Query: 72  SAVTVRSTIRRLREQTES 90
           SAVTVRSTIRRLREQTES
Sbjct: 151 SAVTVRSTIRRLREQTES 168

[Close]

BLAST of Spg031707 vs. ExPASy Swiss-Prot
Match: Q9XHE4 (60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.5e-37
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 13 TRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTAS 72
          TRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCK CGKVKAGGAYTLNTAS
Sbjct: 16 TRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKACGKVKAGGAYTLNTAS 75

Query: 73 AVTVRSTIRRLREQTES 90
          AVTVRSTIRRLREQTES
Sbjct: 76 AVTVRSTIRRLREQTES 92

[Close]

BLAST of Spg031707 vs. ExPASy Swiss-Prot
Match: P0DKK1 (60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0679700 PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 5.8e-37
Identity = 74/77 (96.10%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 13 TRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTAS 72
          TRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYT+NTAS
Sbjct: 16 TRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTAS 75

Query: 73 AVTVRSTIRRLREQTES 90
          AVTVRSTIRRLREQTE+
Sbjct: 76 AVTVRSTIRRLREQTEA 92

[Close]

BLAST of Spg031707 vs. ExPASy Swiss-Prot
Match: P0DKK2 (60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0557000 PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 5.8e-37
Identity = 74/77 (96.10%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 13 TRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTAS 72
          TRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYT+NTAS
Sbjct: 16 TRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTAS 75

Query: 73 AVTVRSTIRRLREQTES 90
          AVTVRSTIRRLREQTE+
Sbjct: 76 AVTVRSTIRRLREQTEA 92

[Close]

BLAST of Spg031707 vs. ExPASy Swiss-Prot
Match: Q9SRK6 (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.3e-36
Identity = 73/77 (94.81%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 13 TRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTAS 72
          TRYGASLRKQIKKMEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCGKVKAGGAYT+NTAS
Sbjct: 16 TRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCGKVKAGGAYTMNTAS 75

Query: 73 AVTVRSTIRRLREQTES 90
          AVTVRSTIRRLREQTES
Sbjct: 76 AVTVRSTIRRLREQTES 92

[Close]

BLAST of Spg031707 vs. ExPASy Swiss-Prot
Match: Q9ZRS8 (60S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 4.9e-36
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 13 TRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTAS 72
          TRYGASLRKQIKKMEVSQHSK+FCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYTLNT S
Sbjct: 16 TRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTPS 75

Query: 73 AVTVRSTIRRLREQTE 89
          AVTVRSTIRRLREQTE
Sbjct: 76 AVTVRSTIRRLREQTE 91

[Close]

BLAST of Spg031707 vs. ExPASy TrEMBL
Match: A0A5B6VJD6 (60S ribosomal protein L37a isoform X1 OS=Gossypium australe OX=47621 GN=rpl37A PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.8e-36
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 12 CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTA 71
          CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTA
Sbjct: 19 CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTA 78

Query: 72 SAVTVRSTIRRLREQTES 90
          SAVTVRSTIRRLREQTES
Sbjct: 79 SAVTVRSTIRRLREQTES 96

[Close]

BLAST of Spg031707 vs. ExPASy TrEMBL
Match: A0A2G3APK2 (60S ribosomal protein L37a OS=Capsicum annuum OX=4072 GN=T459_04041 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.8e-36
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 12  CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTA 71
           CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTA
Sbjct: 73  CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTA 132

Query: 72  SAVTVRSTIRRLREQTES 90
           SAVTVRSTIRRLREQTES
Sbjct: 133 SAVTVRSTIRRLREQTES 150

[Close]

BLAST of Spg031707 vs. ExPASy TrEMBL
Match: A0A7J7I8S3 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_002538 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.3e-36
Identity = 81/88 (92.05%), Postives = 82/88 (93.18%), Query Frame = 0


Query: 2   VLPPLFFMFSCTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVK 61
           +LP     FS TRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVK
Sbjct: 66  LLPLSRLCFSGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVK 125

Query: 62  AGGAYTLNTASAVTVRSTIRRLREQTES 90
           AGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 126 AGGAYTLNTASAVTVRSTIRRLREQTES 153

[Close]

BLAST of Spg031707 vs. ExPASy TrEMBL
Match: A0A2P5X4Y7 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA22262 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.3e-36
Identity = 77/78 (98.72%), Postives = 78/78 (100.00%), Query Frame = 0


Query: 12  CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTA 71
           CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK+KAGGAYTLNTA
Sbjct: 91  CTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKIKAGGAYTLNTA 150

Query: 72  SAVTVRSTIRRLREQTES 90
           SAVTVRSTIRRLREQTES
Sbjct: 151 SAVTVRSTIRRLREQTES 168

[Close]

BLAST of Spg031707 vs. ExPASy TrEMBL
Match: A0A6A4LPI0 (Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_08144 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.0e-36
Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 10 FSCTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLN 69
          FS TRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLN
Sbjct: 5  FSGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLN 64

Query: 70 TASAVTVRSTIRRLREQTES 90
          TASAVTVRSTIRRLREQTES
Sbjct: 65 TASAVTVRSTIRRLREQTES 84

[Close]

BLAST of Spg031707 vs. TAIR 10
Match: AT3G10950.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 153.3 bits (386), Expect = 9.2e-38
Identity = 73/77 (94.81%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 13 TRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTAS 72
          TRYGASLRKQIKKMEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCGKVKAGGAYT+NTAS
Sbjct: 16 TRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCGKVKAGGAYTMNTAS 75

Query: 73 AVTVRSTIRRLREQTES 90
          AVTVRSTIRRLREQTES
Sbjct: 76 AVTVRSTIRRLREQTES 92

[Close]

BLAST of Spg031707 vs. TAIR 10
Match: AT3G60245.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 151.0 bits (380), Expect = 4.6e-37
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 13 TRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTAS 72
          TRYGAS+RKQIKKMEVSQHSKYFCEFCGKY VKRKAVGIWGCKDCGKVKAGGAYT+NTAS
Sbjct: 16 TRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGKVKAGGAYTMNTAS 75

Query: 73 AVTVRSTIRRLREQTE 89
          AVTVRSTIRRLREQ E
Sbjct: 76 AVTVRSTIRRLREQIE 91

The following BLAST results are available for this feature:

BLAST of Spg031707 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG2381106.1	2.8e-36	97.50	60S ribosomal protein [Vigna angularis]	[more]
PHT96159.1	3.6e-36	100.00	60S ribosomal protein L37a [Capsicum annuum]	[more]
KAA3469158.1	3.6e-36	100.00	60S ribosomal protein L37a isoform X1 [Gossypium australe]	[more]
KAF5961329.1	4.7e-36	92.05	hypothetical protein HYC85_002538 [Camellia sinensis]	[more]
PPR98408.1	4.7e-36	98.72	hypothetical protein GOBAR_AA22262 [Gossypium barbadense]	[more]

BLAST of Spg031707 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XHE4	4.5e-37	98.70	60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1	[more]
P0DKK1	5.8e-37	96.10	60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g06...	[more]
P0DKK2	5.8e-37	96.10	60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g05...	[more]
Q9SRK6	1.3e-36	94.81	Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB...	[more]
Q9ZRS8	4.9e-36	96.05	60S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1	[more]

BLAST of Spg031707 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5B6VJD6	1.8e-36	100.00	60S ribosomal protein L37a isoform X1 OS=Gossypium australe OX=47621 GN=rpl37A P...	[more]
A0A2G3APK2	1.8e-36	100.00	60S ribosomal protein L37a OS=Capsicum annuum OX=4072 GN=T459_04041 PE=3 SV=1	[more]
A0A7J7I8S3	2.3e-36	92.05	Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_002538 PE=3 SV=1	[more]
A0A2P5X4Y7	2.3e-36	98.72	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA22262 PE=3 SV...	[more]
A0A6A4LPI0	3.0e-36	98.75	Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3...	[more]

BLAST of Spg031707 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10950.1	9.2e-38	94.81	Zinc-binding ribosomal protein family protein	[more]
AT3G60245.1	4.6e-37	94.74	Zinc-binding ribosomal protein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011331	Ribosomal protein L37ae/L37e	GENE3D	2.20.25.30		coord: 11..89 e-value: 4.5E-36 score: 124.8
IPR002674	Ribosomal protein L37ae	PFAM	PF01780	Ribosomal_L37ae	coord: 13..85 e-value: 1.1E-32 score: 111.9
None	No IPR available	PANTHER	PTHR48149:SF2	60S RIBOSOMAL PROTEIN L37A	coord: 12..89
None	No IPR available	PANTHER	PTHR48149	60S RIBOSOMAL PROTEIN L37A-2	coord: 12..89
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 13..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg031707.1	Spg031707.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000272	polysaccharide catabolic process
biological_process	GO:0006417	regulation of translation
biological_process	GO:0006412	translation
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0102229	amylopectin maltohydrolase activity
molecular_function	GO:0016161	beta-amylase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome