Spg031094 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg031094
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold11: 10306946 .. 10308298 (+)
RNA-Seq Expression	Spg031094
Synteny	Spg031094

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACGGCACGAGAAGGACGAGAACCATGGGTTTCTCGTCGGCGATCGTAAACCAAGGTGCTTCCAACGTTCAAACTCCTTCTTCCTCAACAATGTCGGCCACCTCGAGGGAGAATCCGAGTTCGTCTCAACCACGGAGGTCCACGCGCCCCACTGCCGTCCATCAAACCCGAAAACCCGCCACCCAACAATTCAAGAAACGCTCGCGGGAGTGGTTTTCAATAATCTGGGCGATGGGAGCTCAGAGACGTGGTGCTGCTCTTGAAAAAGAAGCGAATAGGCGAGATGAAGAAGAAGCCGCCAAGGAAGTAGGAAGCTCTCGACAAGGAGAGGCTTCAACGGGTAAAAATTCTGAACCTCAAGCTAACCCATCTTCGTCTTGCAGGAACAAACCATTCGTCACCTATAGTGCAAGGAAGAGGAGTCCTAAGAAAGTGGCGCCCGAAAAGCCACTTGTAATCGAGCCCATCAAAACCGCAAGAATGCCCCCGGATGTTTTCGAGGACATAATCTGCCAAGCTGTGGCAAAGGCTCTACTCATTGTCGAAGGCTACAGGGTTGAAAAAGAAGCTTTGAAGGATATTGAGGCTGAGAGAGAGATGGAAAATCAGCAAATGATGAGAGAGGATGAGATTGCAAGAGAAAGAGAGGTTGAAGATGAAAAGAAAAAGGAAGAAGAGAGACAGGAGGGCGAGAGGGCCAAGATTGCTGAGGAGGAAGAGAGAAAGTTAGGAGAAAACCTCAGGAGGGCAGCAATTGATTTGCAACTCCTTGAGGAAGAAAAACGAAGAAGGGAAGAATTAAAAGAAGATGAGAAAAGAAGAAAGGAAGCTGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGGCTCAAAGTGAGTCTGAGATGCTGCAAGGAAGAAAAGAAGGGGCCCAGCAGGGGCCAAATGAAGGAAGTTCAAAAAAAGAAAAAGAAAGAGAAGTTAAAGCCCAAAATACGACCGCATCTAGGCCGCATTCTGAAGAAGGCCTGGCAGAGGCCACTGAAGCTCAGCCTGTTGATGAGGTTTTCGAACCTCTATTCAAAGATGACTCGCCAGCCGCTGATAGCACCTCTTCGGGAGAGATGAGAGATGAAGAAGAGAAAGAAAGCAAGGAGGCCGAGACCTCCAGTGATTCAGAGACAGAATTCGATTCAGAGATCAAGGAGCTGGATGACGACCAAGTTCCTATCTCTGCGGCATTAAGGAGAAAGAAAAGAAGAGAGATTAAAGCTGAAAGGAGGACCAAAAACAAGAATGACCCGATATTTGCCAAGAGGTCAAGGACTAGGTCCATGGACGCCTCTCTAGCAGCTCCTCCTACTGTCTAA

mRNA sequence

ATGCACGGCACGAGAAGGACGAGAACCATGGGTTTCTCGTCGGCGATCGTAAACCAAGGTGCTTCCAACGTTCAAACTCCTTCTTCCTCAACAATGTCGGCCACCTCGAGGGAGAATCCGAGTTCGTCTCAACCACGGAGGTCCACGCGCCCCACTGCCGTCCATCAAACCCGAAAACCCGCCACCCAACAATTCAAGAAACGCTCGCGGGAGTGGTTTTCAATAATCTGGGCGATGGGAGCTCAGAGACGTGGTGCTGCTCTTGAAAAAGAAGCGAATAGGCGAGATGAAGAAGAAGCCGCCAAGGAAGTAGGAAGCTCTCGACAAGGAGAGGCTTCAACGGGTAAAAATTCTGAACCTCAAGCTAACCCATCTTCGTCTTGCAGGAACAAACCATTCGTCACCTATAGTGCAAGGAAGAGGAGTCCTAAGAAAGTGGCGCCCGAAAAGCCACTTGTAATCGAGCCCATCAAAACCGCAAGAATGCCCCCGGATGTTTTCGAGGACATAATCTGCCAAGCTGTGGCAAAGGCTCTACTCATTGTCGAAGGCTACAGGGTTGAAAAAGAAGCTTTGAAGGATATTGAGGCTGAGAGAGAGATGGAAAATCAGCAAATGATGAGAGAGGATGAGATTGCAAGAGAAAGAGAGGTTGAAGATGAAAAGAAAAAGGAAGAAGAGAGACAGGAGGGCGAGAGGGCCAAGATTGCTGAGGAGGAAGAGAGAAAGTTAGGAGAAAACCTCAGGAGGGCAGCAATTGATTTGCAACTCCTTGAGGAAGAAAAACGAAGAAGGGAAGAATTAAAAGAAGATGAGAAAAGAAGAAAGGAAGCTGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGGCTCAAAGTGAGTCTGAGATGCTGCAAGGAAGAAAAGAAGGGGCCCAGCAGGGGCCAAATGAAGGAAGTTCAAAAAAAGAAAAAGAAAGAGAAGTTAAAGCCCAAAATACGACCGCATCTAGGCCGCATTCTGAAGAAGGCCTGGCAGAGGCCACTGAAGCTCAGCCTGTTGATGAGGTTTTCGAACCTCTATTCAAAGATGACTCGCCAGCCGCTGATAGCACCTCTTCGGGAGAGATGAGAGATGAAGAAGAGAAAGAAAGCAAGGAGGCCGAGACCTCCAGTGATTCAGAGACAGAATTCGATTCAGAGATCAAGGAGCTGGATGACGACCAAGTTCCTATCTCTGCGGCATTAAGGAGAAAGAAAAGAAGAGAGATTAAAGCTGAAAGGAGGACCAAAAACAAGAATGACCCGATATTTGCCAAGAGGTCAAGGACTAGGTCCATGGACGCCTCTCTAGCAGCTCCTCCTACTGTCTAA

Coding sequence (CDS)

ATGCACGGCACGAGAAGGACGAGAACCATGGGTTTCTCGTCGGCGATCGTAAACCAAGGTGCTTCCAACGTTCAAACTCCTTCTTCCTCAACAATGTCGGCCACCTCGAGGGAGAATCCGAGTTCGTCTCAACCACGGAGGTCCACGCGCCCCACTGCCGTCCATCAAACCCGAAAACCCGCCACCCAACAATTCAAGAAACGCTCGCGGGAGTGGTTTTCAATAATCTGGGCGATGGGAGCTCAGAGACGTGGTGCTGCTCTTGAAAAAGAAGCGAATAGGCGAGATGAAGAAGAAGCCGCCAAGGAAGTAGGAAGCTCTCGACAAGGAGAGGCTTCAACGGGTAAAAATTCTGAACCTCAAGCTAACCCATCTTCGTCTTGCAGGAACAAACCATTCGTCACCTATAGTGCAAGGAAGAGGAGTCCTAAGAAAGTGGCGCCCGAAAAGCCACTTGTAATCGAGCCCATCAAAACCGCAAGAATGCCCCCGGATGTTTTCGAGGACATAATCTGCCAAGCTGTGGCAAAGGCTCTACTCATTGTCGAAGGCTACAGGGTTGAAAAAGAAGCTTTGAAGGATATTGAGGCTGAGAGAGAGATGGAAAATCAGCAAATGATGAGAGAGGATGAGATTGCAAGAGAAAGAGAGGTTGAAGATGAAAAGAAAAAGGAAGAAGAGAGACAGGAGGGCGAGAGGGCCAAGATTGCTGAGGAGGAAGAGAGAAAGTTAGGAGAAAACCTCAGGAGGGCAGCAATTGATTTGCAACTCCTTGAGGAAGAAAAACGAAGAAGGGAAGAATTAAAAGAAGATGAGAAAAGAAGAAAGGAAGCTGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGGCTCAAAGTGAGTCTGAGATGCTGCAAGGAAGAAAAGAAGGGGCCCAGCAGGGGCCAAATGAAGGAAGTTCAAAAAAAGAAAAAGAAAGAGAAGTTAAAGCCCAAAATACGACCGCATCTAGGCCGCATTCTGAAGAAGGCCTGGCAGAGGCCACTGAAGCTCAGCCTGTTGATGAGGTTTTCGAACCTCTATTCAAAGATGACTCGCCAGCCGCTGATAGCACCTCTTCGGGAGAGATGAGAGATGAAGAAGAGAAAGAAAGCAAGGAGGCCGAGACCTCCAGTGATTCAGAGACAGAATTCGATTCAGAGATCAAGGAGCTGGATGACGACCAAGTTCCTATCTCTGCGGCATTAAGGAGAAAGAAAAGAAGAGAGATTAAAGCTGAAAGGAGGACCAAAAACAAGAATGACCCGATATTTGCCAAGAGGTCAAGGACTAGGTCCATGGACGCCTCTCTAGCAGCTCCTCCTACTGTCTAA

Protein sequence

MHGTRRTRTMGFSSAIVNQGASNVQTPSSSTMSATSRENPSSSQPRRSTRPTAVHQTRKPATQQFKKRSREWFSIIWAMGAQRRGAALEKEANRRDEEEAAKEVGSSRQGEASTGKNSEPQANPSSSCRNKPFVTYSARKRSPKKVAPEKPLVIEPIKTARMPPDVFEDIICQAVAKALLIVEGYRVEKEALKDIEAEREMENQQMMREDEIAREREVEDEKKKEEERQEGERAKIAEEEERKLGENLRRAAIDLQLLEEEKRRREELKEDEKRRKEAEDFLAAFEPLHKAQSESEMLQGRKEGAQQGPNEGSSKKEKEREVKAQNTTASRPHSEEGLAEATEAQPVDEVFEPLFKDDSPAADSTSSGEMRDEEEKESKEAETSSDSETEFDSEIKELDDDQVPISAALRRKKRREIKAERRTKNKNDPIFAKRSRTRSMDASLAAPPTV

Homology

The following BLAST results are available for this feature:

BLAST of Spg031094 vs.


Match Name	E-value	Identity	Description

BLAST of Spg031094 vs.


Match Name	E-value	Identity	Description

BLAST of Spg031094 vs.


Match Name	E-value	Identity	Description

BLAST of Spg031094 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 208..279
None	No IPR available	COILS	Coil	Coil	coord: 185..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 312..326
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..284
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..450
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 421..435

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg031094.1	Spg031094.1	mRNA