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Spg030958 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCAAGACGAGGTGGTTGTGAAGTGCCTGAAGGCTTACGACTATGCTGAACAAAAGGAGGTTTGTGCCTCTAACATTTAGAGGTGTACGCCTCCATGCTTACGCCTTTAAGGCGTTAAAGGCACAGGCCTCATTGCATAATGAAAATTCTTTAGAATTTCTAATAGTAGGCTGGTAGTAGGTTTATGTCTAATGGGTGAGAGTACCCTAATGACATTAATTGTCTTGAAGACTTAAACAATGTGGCATATTATCTAAGTGAAGGTCTCACTATCCTATTCCTAAAATGTAAGCGGTGGCACACTAGAAACAGCAATTATTTGTCACCATTTGGAGAAGAATAGTGTCTGCCACCACACACAGCAAAGCTAATATGTTAGTTCTGTCTGCTTTTATTCTTCTTTTGGTTTCTTGTTTACTATTTCTCCTTTTCACATTTCTTTGATTATTATTTATTGCCACCTCAACCATTTTTTTTAGAAGAAAAAAAGAGTGATAAGGTCTATGTAGGGATGTTTATGAGGTGGAGCAGGGATGGGGATGTGAGTAAGGGAGACTCGAAGAGGTATGAGAGAGTGAGGGTAGCAATGGAGGTGGAGGGAGATGAAATCTACTATCAATAGAGAGGGTGGTGGGTCTGCCACCACCAATGGAACTGAAAGGAAGATTGAAATGGAAAGGGTGGTAACTCTAGGGTTTACATATATAGGTTTAGTTTGATATTTTATTTTATTATTTTTCAATTTCTTTTATCAGTGAGCATTAGTGAATTGAAAATTTTTCATATTCTAAATTATAGAACTGAGATATTGAAACAGTCCTATACAACAAGTAAAGACCTAACAAGACAAAAAAAGAGCTCCAATCCAAAACAATAAGAACAAGAAGTTAATTACAAAAGTCTCCAGAAACAAACACCTAAAAAGAGATGTTAAATTTGACAAGTGCCCTTCCCAAGACCTTTCAAATCCTCTAAAAATTCTCCCATTCTTCTTCAGTAAGATATTCCGTAAAACGGGATTAGAAAAACTAGCATACTAGAGAATTCAAGGCTTATCTTGAAAGGGAAAAATGCTAAAGTCTCCTCCATCATAAGACAACAACTATTGTTATGAGCTAAGCACACATCAAACATATCCACAAAAAGGTTCCACATCGGGCTAGCAACCCTAAATCTCCAAAGGATGTGATCCAAATACTCAAATGCCTTCTACAAAGAATGTATCACTATGGTGTGGTCTCATCAAGAAGGGAGAATGCCTTTGAATACAGTCCATAGTGTTGACTGTCCCATGTAAGCCCTTCTAGGTGGTGGTTGACTTGCTGAAATAAGTTAACAGTTTTGTAATTTCAAAGGGGATAACTATTGCAGTTGGGATAAACTTCTTGTTGCACTGTCCAAGTTGACTTATATAGGGGTGATAGAGTTTTAACACCACATTTAATGTCCCTTTAATTTTTATGCTAGTAGTTCGGTTCCTTATAGATTAATTGGACTTTCATGACAGGGATTCTATTACGATGCTTTTTATGATGATTTGGGCTTAAATGATGATCACTTCAAGCAAATTGAGTCTGGTGCACTGAAGGCTGTATCGGTATTGTTCTTTCTCTTGACAAAGAGTTTACACCATTTATTTTACATAATTAAAATCTGGTTTTATATATTTTTCCATGTATTTCACATGGAAGAAAGATGTTAATAGTTATATAAAGAATGTCCGTCACTATTTCTTTCTTTCTTCCGTTATTATTTTTTCTTGAGAGGGAGAGGACTGGTGTTGCTTGCAATCTTGTTATCTTTCTCATGCAAAAGGCCCAACAACTAGGTTTTGGGATCAATTTTGTATGCTGTAATGCTATGCAGGAGAATCCTCATCCTAACCCTAGTTAACTTTATCTTCATTTGTTATAAAGAATGTAAAAGATTCCGTGCAAGTAAACTAACCTTCTGGTTGTTCCAATTTTTGGAACTAGTAGCAAATCAATAATTTGACAATTGATATCAAAATGTATGATCAGCTAGAAACTCGTAGTGCATATCAGTTGCTTCCTCAGCTTTAGCAAGTGCTTGCTTATCATCTACCTATTGACTGTATTAGCGACTTTCTTGGCTAAAAAATGAAGTGCTGGAAGATTATTCCCAATAAAGTATTCTATACTCTGTATTCATGCATGAAATGTCATATCATTACAGAGGATACTTTTTCTCAGAGGAATAATTCGATTTATTTCTTTTAAATTTTCAGGAGAGACAACCTTTTGAGCGCATTGAAGTTTCAAGGCAACAAGCTCTTGAAATGTTTTCTGACAATAAATTCAAGGCAATTGAATATCACTCAAAAGATTTGCAGTTCATTTGA ATGCCTCAAGACGAGGTGGTTGTGAAGTGCCTGAAGGCTTACGACTATGCTGAACAAAAGGAGGGATTCTATTACGATGCTTTTTATGATGATTTGGGCTTAAATGATGATCACTTCAAGCAAATTGAGTCTGGTGCACTGAAGGCTGTATCGGAGAGACAACCTTTTGAGCGCATTGAAGTTTCAAGGCAACAAGCTCTTGAAATGTTTTCTGACAATAAATTCAAGGCAATTGAATATCACTCAAAAGATTTGCAGTTCATTTGA ATGCCTCAAGACGAGGTGGTTGTGAAGTGCCTGAAGGCTTACGACTATGCTGAACAAAAGGAGGGATTCTATTACGATGCTTTTTATGATGATTTGGGCTTAAATGATGATCACTTCAAGCAAATTGAGTCTGGTGCACTGAAGGCTGTATCGGAGAGACAACCTTTTGAGCGCATTGAAGTTTCAAGGCAACAAGCTCTTGAAATGTTTTCTGACAATAAATTCAAGGCAATTGAATATCACTCAAAAGATTTGCAGTTCATTTGA MPQDEVVVKCLKAYDYAEQKEGFYYDAFYDDLGLNDDHFKQIESGALKAVSERQPFERIEVSRQQALEMFSDNKFKAIEYHSKDLQFI Homology
BLAST of Spg030958 vs. NCBI nr
Match: KAG7032420.1 (Threonine--tRNA ligase, mitochondrial 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 118.2 bits (295), Expect = 3.5e-23 Identity = 57/67 (85.07%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of Spg030958 vs. NCBI nr
Match: KAG7029174.1 (Threonine--tRNA ligase, mitochondrial 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 115.9 bits (289), Expect = 1.7e-22 Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 0
BLAST of Spg030958 vs. NCBI nr
Match: XP_023527929.1 (threonine--tRNA ligase, mitochondrial 1-like, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 113.2 bits (282), Expect = 1.1e-21 Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of Spg030958 vs. NCBI nr
Match: XP_038891995.1 (threonine--tRNA ligase, mitochondrial 1 [Benincasa hispida]) HSP 1 Score: 112.5 bits (280), Expect = 1.9e-21 Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of Spg030958 vs. NCBI nr
Match: XP_004142299.1 (threonine--tRNA ligase, mitochondrial 1 [Cucumis sativus] >KAE8648246.1 hypothetical protein Csa_018476 [Cucumis sativus]) HSP 1 Score: 112.5 bits (280), Expect = 1.9e-21 Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of Spg030958 vs. ExPASy Swiss-Prot
Match: O04630 (Threonine--tRNA ligase, mitochondrial 1 OS=Arabidopsis thaliana OX=3702 GN=THRRS PE=1 SV=3) HSP 1 Score: 84.7 bits (208), Expect = 5.6e-16 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 0
BLAST of Spg030958 vs. ExPASy Swiss-Prot
Match: Q0V9S0 (Threonine--tRNA ligase 2, cytoplasmic OS=Xenopus tropicalis OX=8364 GN=tars3 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 9.6e-08 Identity = 26/57 (45.61%), Postives = 37/57 (64.91%), Query Frame = 0
BLAST of Spg030958 vs. ExPASy Swiss-Prot
Match: Q3ZBV8 (Threonine--tRNA ligase 1, cytoplasmic OS=Bos taurus OX=9913 GN=TARS1 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 6.2e-07 Identity = 24/57 (42.11%), Postives = 38/57 (66.67%), Query Frame = 0
BLAST of Spg030958 vs. ExPASy Swiss-Prot
Match: Q9D0R2 (Threonine--tRNA ligase 1, cytoplasmic OS=Mus musculus OX=10090 GN=Tars1 PE=1 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 6.2e-07 Identity = 24/57 (42.11%), Postives = 38/57 (66.67%), Query Frame = 0
BLAST of Spg030958 vs. ExPASy Swiss-Prot
Match: Q5XHY5 (Threonine--tRNA ligase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars1 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 6.2e-07 Identity = 24/57 (42.11%), Postives = 38/57 (66.67%), Query Frame = 0
BLAST of Spg030958 vs. ExPASy TrEMBL
Match: A0A0A0KJG3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G080790 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 9.2e-22 Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of Spg030958 vs. ExPASy TrEMBL
Match: A0A6J1DR46 (Threonyl-tRNA synthetase OS=Momordica charantia OX=3673 GN=LOC111023566 PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 9.2e-22 Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of Spg030958 vs. ExPASy TrEMBL
Match: A0A6J1F237 (Threonyl-tRNA synthetase OS=Cucurbita moschata OX=3662 GN=LOC111439084 PE=3 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.1e-21 Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of Spg030958 vs. ExPASy TrEMBL
Match: A0A6J1DG60 (Threonyl-tRNA synthetase OS=Momordica charantia OX=3673 GN=LOC111020133 PE=3 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.7e-21 Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of Spg030958 vs. ExPASy TrEMBL
Match: A0A6J1DER8 (Threonyl-tRNA synthetase OS=Momordica charantia OX=3673 GN=LOC111020133 PE=3 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.7e-21 Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of Spg030958 vs. TAIR 10
Match: AT5G26830.1 (Threonyl-tRNA synthetase ) HSP 1 Score: 84.7 bits (208), Expect = 4.0e-17 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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