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Spg030858 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCTCTCTAATCCCACCCGTTTCTCCCTCAGTCCCGATCGTCTTCTGATAGGAAGCTCAACAGCAGCATGTAGAAGTCATTTATGCGTCGCTCGGCTCGTGGGTCACCTTGGATTTGTGTGGGTCAGAGCGAACACCAAGCTTTTATCCCAATTTCTACCATTTCAAGGGAACTCGGCTGTGAGTAAGTGAGACAGAGCAAGGTCTAGTTAAATTAAAATGAAAACACACTGAAAAATTGTTGTGTACATTGAAACACACTCCTTTTCGATTCCCTTTCGATTTCTTCAAAGCAACCTTGCCCCATCTACTCATTTTTCTTCGTCAATTTCCTAGGTTTGAAGAAACATGCTGAAATTTTTCTCTCCTTCGAAGCAAGAAAAGGGCACTGAGCTTGAAAATTTGTCTCCCCTTCGAAGAAACCCACATCAACGTCCCCTTCAACTTTAGGTAAATCCTCCTCTTGTTTTGGCCTTCACATCTTTGAGAATTTAAATGCATTGGAGTTTATTTCTTTTTTTACTATTGTTGAACTTCATTGTCATTGTGAGTATATGACAACTTTGAAAAAGAATTCAAAGGTGTTTGCATATGTGATATTGTGCGTTTTTTACAGTTTTGAAAAAGAAAAAGTCAGTATCAATATCTTTGAGAATTTAGAGGGCTTGAAGATGTGTCATTGTGAGTATTGCATGAGTGAGATTTTTCATTTTGCTACATTGCCATAGCTTTCCCCTTTCATTAGTTATACTTCAATATCTTAATTTGCTTACTAATTTCCATGTGTTTTCAGTTAACTACTTCCCATTTTACTCATTCAAGACAGGGCTATGGAAGAAACGACCTCTGATTACTCAATTTGCCCACCTCAGATTATTGCTTTTATATGCCTAGTTTTTTTTTTTTTTTCCATGTTTACTCTTACTTTAACCTTGCAAATGTCCTCTCTTATGGATAAATGATTGTGTGAAAAGCTTTATAAGTATTTAATTTAATATGGATTGGAGAAGAAAATGAACAAAAAGGAAATAAAAATCGCGTCTTATTAGGAGTTGGAAGTTGGGTGGGTAAATCTCTTCTGTCTATTACCTTAAAATTTGTATTGGGTCATGGAAAGAAAATAATAAAAGAAGGAGAAAACAGTGGAAGTTTTTTGAATTGAAGTCAAAAGAAGTGAGGATTCTTTTTTATTATTTTGTTCCAAAGTTAATGTATTGTGGTAGAAGATGTTTGGACTGATTTTCAGATGGATTGTTTTGTGGTCTTTCTTAATGATCTTTTTAGGATTTTAGGGGAATTTTGAGTGTGCTCAGATTTTCTCCACTTCCTTTTGCACCATGGTGATATGGGGTCTATGTTGAAAGATATACCTCGTTCTTATGTTTTTTATGTAAAAATATTAGTGAAGAACTAGTCTGATTGACGACTCTGGCTATGTTTAACTTAACATACAATTGTTTTTTGCTTCTTCTATTGTTTGTTTAACTTTGCTCGCATTGTTTGTAGTTACTCTCTATTTGTAGTGTGTCGTACATTTGGCTTCATGTTAAATACAATTCTCCTTCCTAATACGAAATTTTTAACATTTGAAGGATGAACTTGGGACCTAGACTATTACTAATGGTATGTTTTCTTACTCTTATTTTTGCAATCTTTGTAGAGCCAACTCTGCACTTAGTGCTCAAGCTTCTAGACAGTACTATTGAGTCATTTTTAATGTCATTGGATAGGAAGTACAGTGAGGATAAGATAATCTGCTACAAGTAAGCTTCAATATGCTAATTAATTGCAAAAAAAAAAAAAGTTTGTGATTCTTCTATATGAACTATGTTTGTTGTTTTCTTTTGCAATAACATTATATATGAAGTTGGACATGGTGGGTGGTTTTATCTTATTTCTAACATCAATTCTTCTAAATAGTTCAATGTCCTACTCTTGTTGATCAATTTCTTGTTCATAAAGAAGTCAAACTGCGAAATGACTTTAGAGTTTTACATCTTGTATTACAGCAAATTTTTAACTAATTTTTCCTATAACTTTTGGTCTGAAGTAATTCTTTTGTATAATAAACATTTAGAATCAAAACTAGTAACAATTAAAAGAGTATAAATTTTAAAAATACTTGGAACTCATTGGGTTATTATTAAGGAGTTTGATGTGAAATTTATTCACTATATCCAAGCGACTCATCCCATTTTGGTTAAAAATGTTGTTGCTGATAGTTGATTTGAGTGTTCAAATTAAGTGAATTTACAAGCTCTGTTTTTCTGCTAAAGAATTTAGGACATAATAAAACATTTTAATGTTTTTTTCTTATGAATTGAAAGTTGATAATGTCATTGCCAAATTATACTTTTACTTTCTTTTGTTTATTATTTGTAAGGTTTAAGTGATGGTGCTAACTCTTTAATAAATAAGGGCTACTCCAACTCCACAATGGAAACCCTTGCTTGAACCTTGCCAAATCCCTAGAAGTATGTTTCCAGTTGATTCGAAACTAGATCTTTTATTTGTCATTCTAACAAACAAATGGTATACTTTTTATTTGTGTTTCTTAACAATATTAAAAGGGAAGGAAAGGATTTTGTTACTACATCTTTTATTTTAACCTTCAATTTTAGGTAAGCAACTTTCGATCTTAATCTATCACTTTTACCATTGTCTAATTCTATGAACAAAAGTCAAAAGATAAAGTTTGAGTCATCTTAAATATTTTAAGAAACTAAAGTGTTCAATGCTAATGCAAAGGAGCTTCAAGGCATTATATTTCTTGAAGTTTGTCTAGGACAATTGGAAACCTCTGAAATCCCTATCGTCCATATTCGAGCATATCTAATTGTAAGTTCAAAATTGTTTCCATTCAAGTCTTACTTTCCTTATAATTTCATACATTTGCTTAGACTCTTACCATGTAGAAAAAAAAAATGAAATCTTGTTGAAATCATGGTGAAATTTATTTCTTTCTAAGATGATATGTCTTCCTCTTTCTTTGATTATTTTAGGTGATGTCCTGAGCTGTTTTGTTGAGACTACTCAGGCTAGAGTTCGTGCTCTTCAGTTTCTTCCTCATTACAAAAGAAATTCTAGTTAGAAAGATTTCAAAAGTTCTTTGACTGGTTTGATCACTTCAAGTCCGATAGTTTAAAAGTTTTTTTTTGGTGTTCTTTTTCAAAGCCTTTTGATGGATTTTCTTTTTAGAATATTTGTTTTCATTGAGATATTTTTCCCTTTTGTTTTCTTTGTTGTTCTTGTTTCACTCCCTTGTGGAGTTTGTATCCTTTGAGCATTAGTCTCTTTTCATTTATTCAATGAAATGTTTTGTTTTTTGTTAAAAAAAAAACTAAGATTCGTTCTTGATGGCAAATTTGATGAAGTGTCCATGGAGATGCTCTAACTTAGGAGTTGATGTGTCACTCATTTTGATGGATGTATGTGACTGTCATAAACTAATTTTGATAGGAGAATTTTATTTTCTTTGACAGTAGAATTTTGTTTTGACAACAATTCCATTTTAAGTAGTGAGTCAAGTGTCTTCAGCCTCAGTAACTTGTTCTTATTCCTTTGAAAAGAGTAAATCAGTTTCTTATTCTTTACCTATTAATTTTTTTGACAAGATATTCTTTACATGTTAATTCATAAAGATTTTAGTTTTCTTTCCTTGTATTTATGATTTTGATTGGTGGCCATTGAAGAATCATGTTGTCACCTAGATGGAACTATCAATTCTTTTACTTTTGATAAAATTGCTTGTGATTCAAAGTTAGAGTTATAGCCTTTGGTCAAAAAATAAATTGTAAATAGTTTTGAGAAATTTGTGTAAGCCTCATTGCATGATAAAGATTTTACAAAATTTTAAAGAGTGAGCTAGTAGTTATTGTAAATTGTTTTGAGAAATTTGCATAAGCCTCATTCCATATGTCCATTTACCATTTTACCCAAACTTACTTTGGAGTATTATTCAATTCTCTTTTGCATAAAGAAAATGTTGGGCGCCGCAGGAGGTGCAAGTCTCGCATCGGGATCCAGCACAAAGTCATAAAGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAAGGTGTGATTCTTAACAAGTTGTAGCAAATCGCTAGTTAAGCTCTAGAGGGATTTTCCCAAATAGTTTTGAAGTTATTTGCGTTCAATTCTTTGTCTTCTCCTAATGTTGTTCATTAGCTTTTCTTATCAACCATTCATGCAGAGCCCTAACTCCATTGTCTCCTTTACCGTGCGACAACATCGAATCTAAGAAGATCATCACTTGCGGCTAATAGCACTTGAAATTCTAGGTATTTGATTTAAGCAACCAATGGTGTATTTTTTTCTTTCTTATAACCTTTCCTTTGTTTAAACTTTTCCTCTTCACTCAATGCTAACAACCAATGGTGTATTTTAGCAACCAATGCTAGCACTTTTTGGTTTGATTCACCCGTGATCTTCCCATTGTTTTCTTTTTCTCTACTTTGATATTTACTCTTTAAGTGTTCTGGTTGCTTGTTCATTGATATAAGTGTTTTTGTTGTTTATATTTGTTTATTCTTAGGTACTTTAGTGGATGAAGTGGCTAATACTGTAGTAGTGGAGCTTGGTGAAACTCAACTTGTTGTATACTTCTCCATATGTTGCAAGTATTTTTATTTAAAAAAGGTTTCATTTACAAGTGCAACATGCATAGCTGGAAATACAAGATTAAATTGTTAACTAATAGGAGAATTTAATAAGTTTTTTGTTTTATGCCTTTGTTGAATTTAATAGGTTTGTTCCCGATACTTCATTGATTCTCATCTTCACATCGAAACCTAATATATGTTGGACAACAGAATCTGCTAATGGAAAATCTTGTTAA ATGTCTCTCTCTAATCCCACCCGTTTCTCCCTCAGTCCCGATCGTCTTCTGATAGGAAGCTCAACAGCAGCATGTAGAAGTCATTTATGCGTCGCTCGGCTCGTGGGTCACCTTGGATTTGTGTGGGTCAGAGCGAACACCAAGCTTTTATCCCAATTTCTACCATTTCAAGGGAACTCGGCTGTGAAGCCAACTCTGCACTTAGTGCTCAAGCTTCTAGACAGTACTATTGAGTCATTTTTAATGTCATTGGATAGGAAGTACAGTGAGGATAAGATAATCTGCTACAAGGCTACTCCAACTCCACAATGGAAACCCTTGCTTGAACCTTGCCAAATCCCTAGAAGTGATGTCCTGAGCTGTTTTGTTGAGACTACTCAGGCTAGAGTTCGTGCTCTTCAGAGGTGCAAGTCTCGCATCGGGATCCAGCACAAAGTCATAAAGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAAGGTACTTTAGTGGATGAAGTGGCTAATACTGTAGTAGTGGAGCTTGGTGAAACTCAACTTGTTGTATACTTCTCCATATGTTGCAAGTTTGTTCCCGATACTTCATTGATTCTCATCTTCACATCGAAACCTAATATATGTTGGACAACAGAATCTGCTAATGGAAAATCTTGTTAA ATGTCTCTCTCTAATCCCACCCGTTTCTCCCTCAGTCCCGATCGTCTTCTGATAGGAAGCTCAACAGCAGCATGTAGAAGTCATTTATGCGTCGCTCGGCTCGTGGGTCACCTTGGATTTGTGTGGGTCAGAGCGAACACCAAGCTTTTATCCCAATTTCTACCATTTCAAGGGAACTCGGCTGTGAAGCCAACTCTGCACTTAGTGCTCAAGCTTCTAGACAGTACTATTGAGTCATTTTTAATGTCATTGGATAGGAAGTACAGTGAGGATAAGATAATCTGCTACAAGGCTACTCCAACTCCACAATGGAAACCCTTGCTTGAACCTTGCCAAATCCCTAGAAGTGATGTCCTGAGCTGTTTTGTTGAGACTACTCAGGCTAGAGTTCGTGCTCTTCAGAGGTGCAAGTCTCGCATCGGGATCCAGCACAAAGTCATAAAGGAGGATGCCATGAAGTGGTTCCAGGTGAAATATGAAGGTACTTTAGTGGATGAAGTGGCTAATACTGTAGTAGTGGAGCTTGGTGAAACTCAACTTGTTGTATACTTCTCCATATGTTGCAAGTTTGTTCCCGATACTTCATTGATTCTCATCTTCACATCGAAACCTAATATATGTTGGACAACAGAATCTGCTAATGGAAAATCTTGTTAA MSLSNPTRFSLSPDRLLIGSSTAACRSHLCVARLVGHLGFVWVRANTKLLSQFLPFQGNSAVKPTLHLVLKLLDSTIESFLMSLDRKYSEDKIICYKATPTPQWKPLLEPCQIPRSDVLSCFVETTQARVRALQRCKSRIGIQHKVIKEDAMKWFQVKYEGTLVDEVANTVVVELGETQLVVYFSICCKFVPDTSLILIFTSKPNICWTTESANGKSC Homology
BLAST of Spg030858 vs. NCBI nr
Match: NP_001132427.1 (60S ribosomal protein L11-1 [Zea mays] >ACF81262.1 unknown [Zea mays] >AQK93235.1 60S ribosomal protein L11-1 [Zea mays] >AQK93236.1 60S ribosomal protein L11-1 [Zea mays] >PWZ11945.1 60S ribosomal protein L11 [Zea mays]) HSP 1 Score: 66.2 bits (160), Expect = 3.9e-07 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 0
BLAST of Spg030858 vs. NCBI nr
Match: ACG31637.1 (60S ribosomal protein L11-1 [Zea mays]) HSP 1 Score: 66.2 bits (160), Expect = 3.9e-07 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 0
BLAST of Spg030858 vs. NCBI nr
Match: KAF3961778.1 (hypothetical protein CMV_013637 [Castanea mollissima]) HSP 1 Score: 65.9 bits (159), Expect = 5.1e-07 Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 0
BLAST of Spg030858 vs. NCBI nr
Match: PKI44010.1 (hypothetical protein CRG98_035595 [Punica granatum]) HSP 1 Score: 64.3 bits (155), Expect = 1.5e-06 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of Spg030858 vs. NCBI nr
Match: XP_031104660.1 (60S ribosomal protein L11-like [Ipomoea triloba]) HSP 1 Score: 64.3 bits (155), Expect = 1.5e-06 Identity = 27/41 (65.85%), Postives = 35/41 (85.37%), Query Frame = 0
BLAST of Spg030858 vs. ExPASy Swiss-Prot
Match: A2YDY2 (60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 SV=2) HSP 1 Score: 63.5 bits (153), Expect = 3.3e-09 Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 0
BLAST of Spg030858 vs. ExPASy Swiss-Prot
Match: Q0DK10 (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.3e-09 Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 0
BLAST of Spg030858 vs. ExPASy Swiss-Prot
Match: P42795 (60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 2.8e-08 Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 0
BLAST of Spg030858 vs. ExPASy Swiss-Prot
Match: P42794 (60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 2.8e-08 Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 0
BLAST of Spg030858 vs. ExPASy Swiss-Prot
Match: P46287 (60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 8.1e-08 Identity = 24/38 (63.16%), Postives = 33/38 (86.84%), Query Frame = 0
BLAST of Spg030858 vs. ExPASy TrEMBL
Match: B4FGL9 (60S ribosomal protein L11-1 OS=Zea mays OX=4577 GN=100193878 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.9e-07 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 0
BLAST of Spg030858 vs. ExPASy TrEMBL
Match: B6T3F4 (60S ribosomal protein L11-1 OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.9e-07 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 0
BLAST of Spg030858 vs. ExPASy TrEMBL
Match: A0A3L6DTL4 (60S ribosomal protein L11 OS=Zea mays OX=4577 GN=RPL11_5 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.9e-07 Identity = 29/48 (60.42%), Postives = 37/48 (77.08%), Query Frame = 0
BLAST of Spg030858 vs. ExPASy TrEMBL
Match: A0A218X0L8 (60S ribosomal protein L11-1 OS=Punica granatum OX=22663 GN=LOC116195605 PE=3 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 7.2e-07 Identity = 28/42 (66.67%), Postives = 35/42 (83.33%), Query Frame = 0
BLAST of Spg030858 vs. ExPASy TrEMBL
Match: A0A5B7BLB3 (Putative 60S ribosomal protein L11 OS=Davidia involucrata OX=16924 GN=Din_037394 PE=3 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 7.2e-07 Identity = 28/41 (68.29%), Postives = 35/41 (85.37%), Query Frame = 0
BLAST of Spg030858 vs. TAIR 10
Match: AT2G42740.1 (ribosomal protein large subunit 16A ) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09 Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 0
BLAST of Spg030858 vs. TAIR 10
Match: AT3G58700.1 (Ribosomal L5P family protein ) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09 Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 0
BLAST of Spg030858 vs. TAIR 10
Match: AT4G18730.1 (ribosomal protein L16B ) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09 Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 0
BLAST of Spg030858 vs. TAIR 10
Match: AT5G45775.1 (Ribosomal L5P family protein ) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09 Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 0
BLAST of Spg030858 vs. TAIR 10
Match: AT5G45775.2 (Ribosomal L5P family protein ) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09 Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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