Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCAGTGTGTACACGACGTGGTACGAATGTGCCCACCATGTACATGGTTTTAGTGGTGTCGTTTACCAGTCGTATGAGACGTGGGATGACGCAGAAGCAGCTTATATCGCTTACACCATGGAAGTGGACAGTCATTCCAGTCTCATGGAGACCTTCACCTTCACAATAGCTATCCTAACCGTGAACTAGATAGAAATGTAGTCAATAGGACCGTTAGCACATGTAGTGGAGCATACCATGTTCTCCTCTTCGTAGTAGGGTTTTTTCTTGGTGTAGCCGTCATCATATTAGGTAGTCTGATGTAGTATGGACATTTATTTTCAGGATTGTCCGTAGAAGCTATCGAATGGATGCCCAAGATAATGAAATTCAAGAATTGATCGCAATTCTTACTATCATTTGTGCGACACAGTATCAGTTCATCGCGGCAGTTCTTGGGATCTTGCACTCTGGTTATTCCTGGGAATTTCGATCCCCGACTCATGTACGACAACGAATCAGGCAACTGAACTTCTTCCGTATTATTCACGAGGATGATTTGGCTTGTCGTGAAAATACATGCATGGATCGACGAACATTCACGATCCTGTGTGCCCTTTTACGGACCACTGGTAGACTACAAGCCACTAACTACGTCGATGTGGAGGAGATGGTTGCAATGTTCCTCCACATCGTTGCACACGACGTTAAGAATCGTGCGATCCATCGCCAATTTGTGCGTTTGGGAGAGACCGTATCCCGGCACTTCAATGTCGTACTGGATGCAGTACTTCGATTGCACCCAGTCCTATTGAAAGCATCTGAACCAGTTACCAATGCGTGTACAGACGATAGGTGGAAGTGGTTTGAGGTAATGAAATGTTGTTATCTTGTCTTCCACTTGACGACAACCTAACTTCAGGAAAATACTCGACCACTAAAACTTTATCACTCGTCTGTTCGTAGAACTGCTTAGGTGCTCTTGATGGTACACACATTAAGGTCAACATCAGTGCGGTAGATCGCCCCAGATATCGGACGAGGAAAGGGGAGATTGCGACTAATGTACTGGTCGTTTGTTCCCAGAATGGCGAGTTCACTTTCGTGTTCCCAGGGTGGGAAGGATCTGCATCGGACTCAAGGGTACTTCGTGCTGCAGTCTCATGTCCTTTTGGACTAAAGGTTCCCAAGGGCTACTACTACCTCTGTGATGCCGGATATCCTAACGCGGATGGATTCCTAGCACCATATCGTAGCACACGATACCACCTAACCGAGTGGCGAGGTGGAAACCCACCCATGACCCCGAAGGAGCTTTTCAACATGAGACATTCGTCGGCACGGAATGTCATAGAACGAGCCTTCGGACTGTTGAAGGGTCGATGGGCAATATTGAGGGGCAAATCTTACTACCCTGTTGATGTGCAAGTGAAAACCAACACCGCTTGCTGCTACCTTCATAACCTAATAACACGGGAGATGGGACAAGATCCTTCGATGGAGGCCGCTCATACGGGGGAACAAGATTCTAACGGTATGAGAACAGAGAACATCACATTCGTTGAATCCACCACTGCATGGAGTTCCTGGAGGGATGAATTGGCGAATCAAATGTTCGCTGAATGGAACAACAACTGAGATGATCGCCTCAACTTCTTTTGTTAAATTTTTTTGTAAAACGAGACTGTAGAAAGTGCCACTCGTTTTTGTATACCGAACATGTCGTAGGAACAGTATGATGTAAATAGATCGTAATGGGTGTACGAAAACATGTATATTTTGGAATGTAAATGGTTTGAATTTTAACTGTTTATTGGAACAAATGTTCATTAAATTTTACTAGTATGGAACTTTGTAAATGTTCTTTGTTCTTTATGTCCTCCACCTATGGTTCTGATTATTTGCTAAACATGTAGATGGCCGCGTCTGCCTCAGCTTCGAAGAAAGAGAAACACATTTGGACGCCGGATGAAGATGAAGTGCTTGTGCAGTGCCTACTGCACCTAGTCCAAGTGGGGGGATGGCGTGCAGACAATGGGACGTTTCAGCCTGGTTACCAGAATCAGATTGGAAGGATGATGAAAGAAAGATTACCAGGATGCAACATAGTCGTCAGCCCGAACATTGAATCCAGAGTGAAGCTGCTAAAAAAACAGTACATGGCGATAGCCGAGATTATGGGACAGACCTGCAGTGGATTTGGTTGGAATGATGAGAGAAAGTGCATAGAGGCGGAGAAGGAGATATTCGATTTGTGGGTCGAGGTAAGCGAACAACGATCATAATTATGATATACATCTGATACACATATCTGCGAAGAATGTATGCTAACAAAACATTTATCTTCCACCTGTAGGGACATCCACAGGCCAAGGGCCTCCGTAACCGGCCATTCCCATGTTTTTCGGGAAGGACAGCGCTAGAGGAGTGAGAGCCCGAACCCCAATTGAGATAACACCTGAACCAGAGCCGGTAGCCAATCTGGATGAAAACATGAGCGTGGATTTTGAGGATTGCTACGTCCCAAGTCCCCCAGTTATTGATCCCACCCTTGGAGAAGAATTCTGTGGGACACCGACTGGTAGGACGGCTGGTGCAGGACCTTCTAGGGCAGTACATAAGAGACGGCTATCCATTGGGAACGTGGCGGAGGTACTGGAGAATGGATTCCAGATGACCGCACAACAGATCGAGAAGATTGCGATCTGGCCGACCAAGAGGGACGAGCTCGAGAGGAGTCGGCGAAAGGAGTTATATGCGGAGCTACAATCCATTCCTGGGGTGTCTATGGAGGACGGCTTGGTGGTCGCACGGGCACTACTATCAAATGAGAGGATGTTGACTCACTTTATGGACTTCCCTCCAGAATGGAAGTTCGACTACTGTATGGAGATCCTCGGTAGGGCACCGAGACAGCCCCCGCAGCCATGA
mRNA sequence
ATGCCCAGTGTGTACACGACGTGGTACGAATGTGCCCACCATGTACATGGTTTTAGTGGTGTCGTTTACCAGTCGTATGAGACGTGGGATGACGCAGAAGCAGCTTATATCGCTTACACCATGGAAGTGGACAGTCATTCCAGTCTCATGGAGACCTTCACCTTCACAATAGCTATCCTAACCATGGCCGCGTCTGCCTCAGCTTCGAAGAAAGAGAAACACATTTGGACGCCGGATGAAGATGAAGTGCTTGTGCAGTGCCTACTGCACCTAGTCCAAGTGGGGGGATGGCGTGCAGACAATGGGACGTTTCAGCCTGGTTACCAGAATCAGATTGGAAGGATGATGAAAGAAAGATTACCAGGATGCAACATAGTCGTCAGCCCGAACATTGAATCCAGAGTGAAGCTGCTAAAAAAACAGTACATGGCGATAGCCGAGATTATGGGACAGACCTGCAGTGGATTTGGTTGGAATGATGAGAGAAAGTGCATAGAGGCGGAGAAGGAGATATTCGATTTGTGGGTCGAGGACAGCGCTAGAGGAGTGAGAGCCCGAACCCCAATTGAGATAACACCTGAACCAGAGCCGGTAGCCAATCTGGATGAAAACATGAGCGTGGATTTTGAGGATTGCTACGTCCCAAGTCCCCCAGTTATTGATCCCACCCTTGGAGAAGAATTCTGTGGGACACCGACTGGTAGGACGGCTGGTGCAGGACCTTCTAGGGCAGTACATAAGAGACGGCTATCCATTGGGAACGTGGCGGAGGTACTGGAGAATGGATTCCAGATGACCGCACAACAGATCGAGAAGATTGCGATCTGGCCGACCAAGAGGGACGAGCTCGAGAGGAGTCGGCGAAAGGAGTTATATGCGGAGCTACAATCCATTCCTGGGGTGTCTATGGAGGACGGCTTGGTGGTCGCACGGGCACTACTATCAAATGAGAGGATGTTGACTCACTTTATGGACTTCCCTCCAGAATGGAAGTTCGACTACTGTATGGAGATCCTCGGTAGGGCACCGAGACAGCCCCCGCAGCCATGA
Coding sequence (CDS)
ATGCCCAGTGTGTACACGACGTGGTACGAATGTGCCCACCATGTACATGGTTTTAGTGGTGTCGTTTACCAGTCGTATGAGACGTGGGATGACGCAGAAGCAGCTTATATCGCTTACACCATGGAAGTGGACAGTCATTCCAGTCTCATGGAGACCTTCACCTTCACAATAGCTATCCTAACCATGGCCGCGTCTGCCTCAGCTTCGAAGAAAGAGAAACACATTTGGACGCCGGATGAAGATGAAGTGCTTGTGCAGTGCCTACTGCACCTAGTCCAAGTGGGGGGATGGCGTGCAGACAATGGGACGTTTCAGCCTGGTTACCAGAATCAGATTGGAAGGATGATGAAAGAAAGATTACCAGGATGCAACATAGTCGTCAGCCCGAACATTGAATCCAGAGTGAAGCTGCTAAAAAAACAGTACATGGCGATAGCCGAGATTATGGGACAGACCTGCAGTGGATTTGGTTGGAATGATGAGAGAAAGTGCATAGAGGCGGAGAAGGAGATATTCGATTTGTGGGTCGAGGACAGCGCTAGAGGAGTGAGAGCCCGAACCCCAATTGAGATAACACCTGAACCAGAGCCGGTAGCCAATCTGGATGAAAACATGAGCGTGGATTTTGAGGATTGCTACGTCCCAAGTCCCCCAGTTATTGATCCCACCCTTGGAGAAGAATTCTGTGGGACACCGACTGGTAGGACGGCTGGTGCAGGACCTTCTAGGGCAGTACATAAGAGACGGCTATCCATTGGGAACGTGGCGGAGGTACTGGAGAATGGATTCCAGATGACCGCACAACAGATCGAGAAGATTGCGATCTGGCCGACCAAGAGGGACGAGCTCGAGAGGAGTCGGCGAAAGGAGTTATATGCGGAGCTACAATCCATTCCTGGGGTGTCTATGGAGGACGGCTTGGTGGTCGCACGGGCACTACTATCAAATGAGAGGATGTTGACTCACTTTATGGACTTCCCTCCAGAATGGAAGTTCGACTACTGTATGGAGATCCTCGGTAGGGCACCGAGACAGCCCCCGCAGCCATGA
Protein sequence
MPSVYTTWYECAHHVHGFSGVVYQSYETWDDAEAAYIAYTMEVDSHSSLMETFTFTIAILTMAASASASKKEKHIWTPDEDEVLVQCLLHLVQVGGWRADNGTFQPGYQNQIGRMMKERLPGCNIVVSPNIESRVKLLKKQYMAIAEIMGQTCSGFGWNDERKCIEAEKEIFDLWVEDSARGVRARTPIEITPEPEPVANLDENMSVDFEDCYVPSPPVIDPTLGEEFCGTPTGRTAGAGPSRAVHKRRLSIGNVAEVLENGFQMTAQQIEKIAIWPTKRDELERSRRKELYAELQSIPGVSMEDGLVVARALLSNERMLTHFMDFPPEWKFDYCMEILGRAPRQPPQP
Homology
BLAST of Spg030771 vs. NCBI nr
Match:
KAA0050106.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 266.9 bits (681), Expect = 2.4e-67
Identity = 132/279 (47.31%), Postives = 185/279 (66.31%), Query Frame = 0
Query: 65 SASASKKEKHIWTPDEDEVLVQCLLHLVQVGGWRADNGTFQPGYQNQIGRMMKERLPGCN 124
+++ SK KH WT DEVLV+CLL LV+ GGWRADNGTF+ GY Q+ ++MKE++ G N
Sbjct: 2 ASTNSKATKHRWT-TIDEVLVECLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKILGSN 61
Query: 125 IVVSPNIESRVKLLKKQYMAIAEIMGQTCSGFGWNDERKCIEAEKEIFDLWVEDSARGVR 184
I V+PN++SRVK+LKKQY+AIAE+MG CSGFGWN+ERKCIEAEK +FD WV+ +AR +
Sbjct: 62 IQVTPNLKSRVKILKKQYIAIAEMMGPACSGFGWNEERKCIEAEKSVFDDWVK-TARDIE 121
Query: 185 ARTPIEITPEPEPVANLDENMSVDFEDCYVPSPPVIDPTLGEEFCGTPTGRTAGAGPSRA 244
+++M ++ ED +P+P ++P GE+ TPT AG SR
Sbjct: 122 -----------------EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRP 181
Query: 245 VHKRRLSIGNVAEVLENGFQMTAQQIEKIAIWPTKRDELERSRRKELYAELQSIPGVSME 304
KRR G++ + + T+++I KIA W ++ E+E S K LY +LQ+IPG+ ++
Sbjct: 182 SKKRRSYSGDLMDTFRASMRETSKEIGKIAAWQREKMEIESSLHKRLYVDLQTIPGMDVD 241
Query: 305 DGLVVARALLSNERMLTHFMDFPPEWKFDYCMEILGRAP 344
D L+VA +LL + ML F+D+P EWK+ CM ILGR P
Sbjct: 242 DCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP 261
BLAST of Spg030771 vs. NCBI nr
Match:
TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa])
HSP 1 Score: 202.2 bits (513), Expect = 7.3e-48
Identity = 116/309 (37.54%), Postives = 163/309 (52.75%), Query Frame = 0
Query: 52 TFTFTIAILTMAASASA--------SKKEKHIWTPDEDEVLVQCLLHLVQVGGWRADNGT 111
T T+ + ++ M +S SK KH WT EDEVLV+CLL LV+ GGWRADNGT
Sbjct: 118 TTTYVMLVIQMLKDSSLHTEMASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGT 177
Query: 112 FQPGYQNQIGRMMKERLPGCNIVVSPNIESRVKLLKKQYMAIAEIMGQTCSGFGWNDERK 171
F+ GY KQY AIAE+MG CSGFGWN+ +K
Sbjct: 178 FKLGY------------------------------LKQYTAIAEMMGPACSGFGWNEGQK 237
Query: 172 CIEAEKEIFDLWVE-------------------------DSARGVRARTPIEITPEPEPV 231
CIE EK +FD WV+ D A G R +TP+E++ +
Sbjct: 238 CIEVEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKTPVEMSSQTARD 297
Query: 232 ANLDENMSVDFEDCYVPSPPVIDPTLGEEFCGTPTGRTAGAGPSRAVHKRRLSIGNVAEV 291
+++M ++ ED +P+P ++P GE+ TPT T AG SR KRR G++ +
Sbjct: 298 TE-EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMTHDAGSSRPSKKRRSYSGDLMDT 357
Query: 292 LENGFQMTAQQIEKIAIWPTKRDELERSRRKELYAELQSIPGVSMEDGLVVARALLSNER 328
+ T+++I KIA W ++ E+E S K LYAELQ+IPG+ ++D L+VA +LL +
Sbjct: 358 FRASMRETSKEIGKIATWQREKMEIESSLHKRLYAELQTIPGMDVDDCLIVAESLLPDPT 395
BLAST of Spg030771 vs. NCBI nr
Match:
KAA0065306.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 198.0 bits (502), Expect = 1.4e-46
Identity = 110/275 (40.00%), Postives = 148/275 (53.82%), Query Frame = 0
Query: 69 SKKEKHIWTPDEDEVLVQCLLHLVQVGGWRADNGTFQPGYQNQIGRMMKERLPGCNIVVS 128
SK KH WT EDEVLV+CLL LV+ GGWRADNGTF+ Y
Sbjct: 320 SKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLRY-------------------- 379
Query: 129 PNIESRVKLLKKQYMAIAEIMGQTCSGFGWNDERKCIEAEKEIFDLWVEDSARGVRARTP 188
KQY AIAE+MG CS FGWN+ERK A G R +TP
Sbjct: 380 ----------LKQYTAIAEMMGPACSEFGWNEERK----------------ATGGRCKTP 439
Query: 189 IEITPEPEPVANLDENMSVDFEDCYVPSPPVIDPTLGEEFCGTPTGRTAGAGPSRAVHKR 248
+EI + +++M ++ ED +P+P ++P GE+ TPT AG R KR
Sbjct: 440 VEIGSQTARDTE-EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGLCRPSKKR 499
Query: 249 RLSIGNVAEVLENGFQMTAQQIEKIAIWPTKRDELERSRRKELYAELQSIPGVSMEDGLV 308
R G++ + + T+++I KIA W ++ E+E S K LY ELQ+IPG+ ++D L+
Sbjct: 500 RPYSGDLMDTFRASMRETSKEIGKIAAWQREKMEIESSLHKRLYTELQTIPGMDVDDCLI 547
Query: 309 VARALLSNERMLTHFMDFPPEWKFDYCMEILGRAP 344
VA +LL + ML F+D+P EWK+ CM ILGR P
Sbjct: 560 VAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP 547
BLAST of Spg030771 vs. NCBI nr
Match:
XP_008455678.1 (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])
HSP 1 Score: 186.0 bits (471), Expect = 5.4e-43
Identity = 103/260 (39.62%), Postives = 146/260 (56.15%), Query Frame = 0
Query: 42 EVDSHSSLMETFTFTIAILTMAASASASKKEKHIWTPDEDEVLVQCLLHLVQVGGWRADN 101
E DS +E F + T +++ SK KH WT +D+ LV+CLL LV+ GGWRA+N
Sbjct: 14 EEDSSEMNIENINF---VETTNMASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANN 73
Query: 102 GTFQPGYQNQIGRMMKERLPGCNIVVSPNIESRVKLLKKQYMAIAEIMGQTCSGFGWNDE 161
TF+P Y Q+ ++MKE++P NI V+ N+ESRVK LKKQY AIA++MG CS FGWN+E
Sbjct: 74 ETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEE 133
Query: 162 RKCIEAEKEIFDLWVE-------------------------DSARGVRARTPIEITPEPE 221
RKCIEAEK +FD WV+ D A G R + +E+ +
Sbjct: 134 RKCIEAEKSVFDDWVKGHPNARGLLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTA 193
Query: 222 PVANLDENMSVDFEDCYVPSPPVIDPTLGEEFCGTPTGRTAGAGPSRAVHKRRLSIGNVA 277
+++M ++ ED +P+P ++P GE+ T T AG SR KRR G++
Sbjct: 194 RDTE-EDDMDINLEDFDIPNPHGLEPPSGEDMPSTLISMTHDAGSSRPSKKRRSYPGDLM 253
BLAST of Spg030771 vs. NCBI nr
Match:
TYJ96933.1 (retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 184.9 bits (468), Expect = 1.2e-42
Identity = 97/237 (40.93%), Postives = 138/237 (58.23%), Query Frame = 0
Query: 65 SASASKKEKHIWTPDEDEVLVQCLLHLVQVGGWRADNGTFQPGYQNQIGRMMKERLPGCN 124
+++ SK KH WT +D+ LV+CLL LV+ GGWRA+N TF+P Y Q+ ++MKE++P N
Sbjct: 2 ASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSN 61
Query: 125 IVVSPNIESRVKLLKKQYMAIAEIMGQTCSGFGWNDERKCIEAEKEIFDLWVE------- 184
I V+ N+ESRVK LKKQY AIA++MG CS FGWN+ERKCIEAEK +FD WV+
Sbjct: 62 IQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNARG 121
Query: 185 ------------------DSARGVRARTPIEITPEPEPVANLDENMSVDFEDCYVPSPPV 244
D A G R + +E+ + +++M ++ ED +P+P
Sbjct: 122 LLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTE-EDDMDINLEDFDIPNPHG 181
Query: 245 IDPTLGEEFCGTPTGRTAGAGPSRAVHKRRLSIGNVAEVLENGFQMTAQQIEKIAIW 277
++P GE+ T T AG SR KRR G++ + Q T+++I KIA W
Sbjct: 182 LEPPSGEDMPSTLISMTHDAGSSRPSKKRRSYPGDLMDTFRASMQETSKEIGKIAAW 237
BLAST of Spg030771 vs. ExPASy TrEMBL
Match:
A0A5A7U7F7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001200 PE=4 SV=1)
HSP 1 Score: 266.9 bits (681), Expect = 1.2e-67
Identity = 132/279 (47.31%), Postives = 185/279 (66.31%), Query Frame = 0
Query: 65 SASASKKEKHIWTPDEDEVLVQCLLHLVQVGGWRADNGTFQPGYQNQIGRMMKERLPGCN 124
+++ SK KH WT DEVLV+CLL LV+ GGWRADNGTF+ GY Q+ ++MKE++ G N
Sbjct: 2 ASTNSKATKHRWT-TIDEVLVECLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKILGSN 61
Query: 125 IVVSPNIESRVKLLKKQYMAIAEIMGQTCSGFGWNDERKCIEAEKEIFDLWVEDSARGVR 184
I V+PN++SRVK+LKKQY+AIAE+MG CSGFGWN+ERKCIEAEK +FD WV+ +AR +
Sbjct: 62 IQVTPNLKSRVKILKKQYIAIAEMMGPACSGFGWNEERKCIEAEKSVFDDWVK-TARDIE 121
Query: 185 ARTPIEITPEPEPVANLDENMSVDFEDCYVPSPPVIDPTLGEEFCGTPTGRTAGAGPSRA 244
+++M ++ ED +P+P ++P GE+ TPT AG SR
Sbjct: 122 -----------------EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRP 181
Query: 245 VHKRRLSIGNVAEVLENGFQMTAQQIEKIAIWPTKRDELERSRRKELYAELQSIPGVSME 304
KRR G++ + + T+++I KIA W ++ E+E S K LY +LQ+IPG+ ++
Sbjct: 182 SKKRRSYSGDLMDTFRASMRETSKEIGKIAAWQREKMEIESSLHKRLYVDLQTIPGMDVD 241
Query: 305 DGLVVARALLSNERMLTHFMDFPPEWKFDYCMEILGRAP 344
D L+VA +LL + ML F+D+P EWK+ CM ILGR P
Sbjct: 242 DCLIVAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP 261
BLAST of Spg030771 vs. ExPASy TrEMBL
Match:
A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1)
HSP 1 Score: 202.2 bits (513), Expect = 3.5e-48
Identity = 116/309 (37.54%), Postives = 163/309 (52.75%), Query Frame = 0
Query: 52 TFTFTIAILTMAASASA--------SKKEKHIWTPDEDEVLVQCLLHLVQVGGWRADNGT 111
T T+ + ++ M +S SK KH WT EDEVLV+CLL LV+ GGWRADNGT
Sbjct: 118 TTTYVMLVIQMLKDSSLHTEMASTNSKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGT 177
Query: 112 FQPGYQNQIGRMMKERLPGCNIVVSPNIESRVKLLKKQYMAIAEIMGQTCSGFGWNDERK 171
F+ GY KQY AIAE+MG CSGFGWN+ +K
Sbjct: 178 FKLGY------------------------------LKQYTAIAEMMGPACSGFGWNEGQK 237
Query: 172 CIEAEKEIFDLWVE-------------------------DSARGVRARTPIEITPEPEPV 231
CIE EK +FD WV+ D A G R +TP+E++ +
Sbjct: 238 CIEVEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKTPVEMSSQTARD 297
Query: 232 ANLDENMSVDFEDCYVPSPPVIDPTLGEEFCGTPTGRTAGAGPSRAVHKRRLSIGNVAEV 291
+++M ++ ED +P+P ++P GE+ TPT T AG SR KRR G++ +
Sbjct: 298 TE-EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMTHDAGSSRPSKKRRSYSGDLMDT 357
Query: 292 LENGFQMTAQQIEKIAIWPTKRDELERSRRKELYAELQSIPGVSMEDGLVVARALLSNER 328
+ T+++I KIA W ++ E+E S K LYAELQ+IPG+ ++D L+VA +LL +
Sbjct: 358 FRASMRETSKEIGKIATWQREKMEIESSLHKRLYAELQTIPGMDVDDCLIVAESLLPDPT 395
BLAST of Spg030771 vs. ExPASy TrEMBL
Match:
A0A5A7VG45 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00220 PE=3 SV=1)
HSP 1 Score: 198.0 bits (502), Expect = 6.6e-47
Identity = 110/275 (40.00%), Postives = 148/275 (53.82%), Query Frame = 0
Query: 69 SKKEKHIWTPDEDEVLVQCLLHLVQVGGWRADNGTFQPGYQNQIGRMMKERLPGCNIVVS 128
SK KH WT EDEVLV+CLL LV+ GGWRADNGTF+ Y
Sbjct: 320 SKATKHRWTTIEDEVLVECLLQLVEEGGWRADNGTFKLRY-------------------- 379
Query: 129 PNIESRVKLLKKQYMAIAEIMGQTCSGFGWNDERKCIEAEKEIFDLWVEDSARGVRARTP 188
KQY AIAE+MG CS FGWN+ERK A G R +TP
Sbjct: 380 ----------LKQYTAIAEMMGPACSEFGWNEERK----------------ATGGRCKTP 439
Query: 189 IEITPEPEPVANLDENMSVDFEDCYVPSPPVIDPTLGEEFCGTPTGRTAGAGPSRAVHKR 248
+EI + +++M ++ ED +P+P ++P GE+ TPT AG R KR
Sbjct: 440 VEIGSQTARDTE-EDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGLCRPSKKR 499
Query: 249 RLSIGNVAEVLENGFQMTAQQIEKIAIWPTKRDELERSRRKELYAELQSIPGVSMEDGLV 308
R G++ + + T+++I KIA W ++ E+E S K LY ELQ+IPG+ ++D L+
Sbjct: 500 RPYSGDLMDTFRASMRETSKEIGKIAAWQREKMEIESSLHKRLYTELQTIPGMDVDDCLI 547
Query: 309 VARALLSNERMLTHFMDFPPEWKFDYCMEILGRAP 344
VA +LL + ML F+D+P EWK+ CM ILGR P
Sbjct: 560 VAESLLPDPTMLHAFLDYPAEWKYRKCMRILGRQP 547
BLAST of Spg030771 vs. ExPASy TrEMBL
Match:
A0A1S3C252 (uncharacterized protein At2g29880-like OS=Cucumis melo OX=3656 GN=LOC103495792 PE=4 SV=1)
HSP 1 Score: 186.0 bits (471), Expect = 2.6e-43
Identity = 103/260 (39.62%), Postives = 146/260 (56.15%), Query Frame = 0
Query: 42 EVDSHSSLMETFTFTIAILTMAASASASKKEKHIWTPDEDEVLVQCLLHLVQVGGWRADN 101
E DS +E F + T +++ SK KH WT +D+ LV+CLL LV+ GGWRA+N
Sbjct: 14 EEDSSEMNIENINF---VETTNMASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANN 73
Query: 102 GTFQPGYQNQIGRMMKERLPGCNIVVSPNIESRVKLLKKQYMAIAEIMGQTCSGFGWNDE 161
TF+P Y Q+ ++MKE++P NI V+ N+ESRVK LKKQY AIA++MG CS FGWN+E
Sbjct: 74 ETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEE 133
Query: 162 RKCIEAEKEIFDLWVE-------------------------DSARGVRARTPIEITPEPE 221
RKCIEAEK +FD WV+ D A G R + +E+ +
Sbjct: 134 RKCIEAEKSVFDDWVKGHPNARGLLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTA 193
Query: 222 PVANLDENMSVDFEDCYVPSPPVIDPTLGEEFCGTPTGRTAGAGPSRAVHKRRLSIGNVA 277
+++M ++ ED +P+P ++P GE+ T T AG SR KRR G++
Sbjct: 194 RDTE-EDDMDINLEDFDIPNPHGLEPPSGEDMPSTLISMTHDAGSSRPSKKRRSYPGDLM 253
BLAST of Spg030771 vs. ExPASy TrEMBL
Match:
A0A5D3BC95 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00380 PE=4 SV=1)
HSP 1 Score: 184.9 bits (468), Expect = 5.8e-43
Identity = 97/237 (40.93%), Postives = 138/237 (58.23%), Query Frame = 0
Query: 65 SASASKKEKHIWTPDEDEVLVQCLLHLVQVGGWRADNGTFQPGYQNQIGRMMKERLPGCN 124
+++ SK KH WT +D+ LV+CLL LV+ GGWRA+N TF+P Y Q+ ++MKE++P N
Sbjct: 2 ASTNSKATKHRWTTIKDDALVECLLQLVEEGGWRANNETFKPRYLVQVQKLMKEKIPRSN 61
Query: 125 IVVSPNIESRVKLLKKQYMAIAEIMGQTCSGFGWNDERKCIEAEKEIFDLWVE------- 184
I V+ N+ESRVK LKKQY AIA++MG CS FGWN+ERKCIEAEK +FD WV+
Sbjct: 62 IQVTLNLESRVKFLKKQYTAIAKMMGPACSRFGWNEERKCIEAEKSVFDDWVKGHPNARG 121
Query: 185 ------------------DSARGVRARTPIEITPEPEPVANLDENMSVDFEDCYVPSPPV 244
D A G R + +E+ + +++M ++ ED +P+P
Sbjct: 122 LLNKPFAYFYDLEIVFGRDKATGGRCKPFVEMASQTARDTE-EDDMDINLEDFDIPNPHG 181
Query: 245 IDPTLGEEFCGTPTGRTAGAGPSRAVHKRRLSIGNVAEVLENGFQMTAQQIEKIAIW 277
++P GE+ T T AG SR KRR G++ + Q T+++I KIA W
Sbjct: 182 LEPPSGEDMPSTLISMTHDAGSSRPSKKRRSYPGDLMDTFRASMQETSKEIGKIAAW 237
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0050106.1 | 2.4e-67 | 47.31 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
TYK07921.1 | 7.3e-48 | 37.54 | hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa] | [more] |
KAA0065306.1 | 1.4e-46 | 40.00 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
XP_008455678.1 | 5.4e-43 | 39.62 | PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo] | [more] |
TYJ96933.1 | 1.2e-42 | 40.93 | retrotransposon protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U7F7 | 1.2e-67 | 47.31 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3C7T4 | 3.5e-48 | 37.54 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7VG45 | 6.6e-47 | 40.00 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A1S3C252 | 2.6e-43 | 39.62 | uncharacterized protein At2g29880-like OS=Cucumis melo OX=3656 GN=LOC103495792 P... | [more] |
A0A5D3BC95 | 5.8e-43 | 40.93 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |