Spg030355 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg030355
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold6: 25720776 .. 25721375 (-)
RNA-Seq Expression	Spg030355
Synteny	Spg030355

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATCAGAAAATGATTGAGGAAGACGAGCTTGTGAAGGAAAGTGACCGTGAAGAAGAGAAAAGAAGAAAAGAAGAAGAGCAAGAGGCCGAGAGGGCCTTAGAGGCTGAAGAAGTTAGAAAGTATGAGGAAAACCTCAGGAGGGCAGCCATGGATTTGCAGCTCCTTGAAGACTTCCTTGCAGCCTTTGAGCCACTCCACAAAGCTCAAAGTGAGGTTGAAGCACTGCAAGGAAGGGTAGAAGAAAAGGCCCAACAGGGGCCAACAGAAGAAAATTTTGAAAAAGAAAAAGAAAGAGAAGTGGAGAATGAAGGCCAGAATGCGACCCCATCTGGGCCGCATTCTGAAGAAGGCTTAGCCGAGGCCACTGTTGATCAGCCAGCTGAAGAGGTTTTTGAGCCTCTATTCACGAATGACCCACCAGCTGCTGATAGCACCTCTTCAGGAGAGAAGATGGAAGAAGAGGAAAAAGAAGACGAGGAGGCCGAGACCTCTAGTGATTCTGACTCTGATACACGATCTGATTCAGAGATTATGGAGCTAGATGGCGACCAAGTCTCTATCTCTGCAGCATTGAGAAGAAAGAGAAAGAGCTAG

mRNA sequence

ATGGAAAATCAGAAAATGATTGAGGAAGACGAGCTTGTGAAGGAAAGTGACCGTGAAGAAGAGAAAAGAAGAAAAGAAGAAGAGCAAGAGGCCGAGAGGGCCTTAGAGGCTGAAGAAGTTAGAAAGTATGAGGAAAACCTCAGGAGGGCAGCCATGGATTTGCAGCTCCTTGAAGACTTCCTTGCAGCCTTTGAGCCACTCCACAAAGCTCAAAGTGAGGTTGAAGCACTGCAAGGAAGGGTAGAAGAAAAGGCCCAACAGGGGCCAACAGAAGAAAATTTTGAAAAAGAAAAAGAAAGAGAAGTGGAGAATGAAGGCCAGAATGCGACCCCATCTGGGCCGCATTCTGAAGAAGGCTTAGCCGAGGCCACTGTTGATCAGCCAGCTGAAGAGGTTTTTGAGCCTCTATTCACGAATGACCCACCAGCTGCTGATAGCACCTCTTCAGGAGAGAAGATGGAAGAAGAGGAAAAAGAAGACGAGGAGGCCGAGACCTCTAGTGATTCTGACTCTGATACACGATCTGATTCAGAGATTATGGAGCTAGATGGCGACCAAGTCTCTATCTCTGCAGCATTGAGAAGAAAGAGAAAGAGCTAG

Coding sequence (CDS)

ATGGAAAATCAGAAAATGATTGAGGAAGACGAGCTTGTGAAGGAAAGTGACCGTGAAGAAGAGAAAAGAAGAAAAGAAGAAGAGCAAGAGGCCGAGAGGGCCTTAGAGGCTGAAGAAGTTAGAAAGTATGAGGAAAACCTCAGGAGGGCAGCCATGGATTTGCAGCTCCTTGAAGACTTCCTTGCAGCCTTTGAGCCACTCCACAAAGCTCAAAGTGAGGTTGAAGCACTGCAAGGAAGGGTAGAAGAAAAGGCCCAACAGGGGCCAACAGAAGAAAATTTTGAAAAAGAAAAAGAAAGAGAAGTGGAGAATGAAGGCCAGAATGCGACCCCATCTGGGCCGCATTCTGAAGAAGGCTTAGCCGAGGCCACTGTTGATCAGCCAGCTGAAGAGGTTTTTGAGCCTCTATTCACGAATGACCCACCAGCTGCTGATAGCACCTCTTCAGGAGAGAAGATGGAAGAAGAGGAAAAAGAAGACGAGGAGGCCGAGACCTCTAGTGATTCTGACTCTGATACACGATCTGATTCAGAGATTATGGAGCTAGATGGCGACCAAGTCTCTATCTCTGCAGCATTGAGAAGAAAGAGAAAGAGCTAG

Protein sequence

MENQKMIEEDELVKESDREEEKRRKEEEQEAERALEAEEVRKYEENLRRAAMDLQLLEDFLAAFEPLHKAQSEVEALQGRVEEKAQQGPTEENFEKEKEREVENEGQNATPSGPHSEEGLAEATVDQPAEEVFEPLFTNDPPAADSTSSGEKMEEEEKEDEEAETSSDSDSDTRSDSEIMELDGDQVSISAALRRKRKS

Homology

The following BLAST results are available for this feature:

BLAST of Spg030355 vs.


Match Name	E-value	Identity	Description

BLAST of Spg030355 vs.


Match Name	E-value	Identity	Description

BLAST of Spg030355 vs.


Match Name	E-value	Identity	Description

BLAST of Spg030355 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 9..46
None	No IPR available	COILS	Coil	Coil	coord: 67..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg030355.1	Spg030355.1	mRNA