Spg030266 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCGCAACAGCAAAACATACCAGCAGATGCCGAAGCTGTCAAGGGAGCAACTAAGCCTAATCTTCAGAAACCACGATGACGACGGCGACGGCCGCCTCAATACCTCTGAGCTAACCGAAGCCTTCCGGTACATCGGCGCCCTTCTTCCATCGTATAGAGCACGCCGCGCTCTTCTTCACTCCGATTCCGATAGAGACGGATTCATCGGCGAGAAGGATTTCGAATTGCTCATCAATTATGCCCACAAACGCAAATACACCGTCATGTGA ATGCCTCGCAACAGCAAAACATACCAGCAGATGCCGAAGCTGTCAAGGGAGCAACTAAGCCTAATCTTCAGAAACCACGATGACGACGGCGACGGCCGCCTCAATACCTCTGAGCTAACCGAAGCCTTCCGGTACATCGGCGCCCTTCTTCCATCGTATAGAGCACGCCGCGCTCTTCTTCACTCCGATTCCGATAGAGACGGATTCATCGGCGAGAAGGATTTCGAATTGCTCATCAATTATGCCCACAAACGCAAATACACCGTCATGTGA ATGCCTCGCAACAGCAAAACATACCAGCAGATGCCGAAGCTGTCAAGGGAGCAACTAAGCCTAATCTTCAGAAACCACGATGACGACGGCGACGGCCGCCTCAATACCTCTGAGCTAACCGAAGCCTTCCGGTACATCGGCGCCCTTCTTCCATCGTATAGAGCACGCCGCGCTCTTCTTCACTCCGATTCCGATAGAGACGGATTCATCGGCGAGAAGGATTTCGAATTGCTCATCAATTATGCCCACAAACGCAAATACACCGTCATGTGA MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTVM Homology
BLAST of Spg030266 vs. NCBI nr
Match: KAG7024248.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 151.4 bits (381), Expect = 3.8e-33 Identity = 73/90 (81.11%), Postives = 79/90 (87.78%), Query Frame = 0
BLAST of Spg030266 vs. NCBI nr
Match: KAG6591370.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 149.4 bits (376), Expect = 1.4e-32 Identity = 72/88 (81.82%), Postives = 77/88 (87.50%), Query Frame = 0
BLAST of Spg030266 vs. NCBI nr
Match: KGN55185.1 (hypothetical protein Csa_012915 [Cucumis sativus]) HSP 1 Score: 141.0 bits (354), Expect = 5.1e-30 Identity = 67/90 (74.44%), Postives = 76/90 (84.44%), Query Frame = 0
BLAST of Spg030266 vs. NCBI nr
Match: KAA0064376.1 (putative calcium-binding protein CML27 [Cucumis melo var. makuwa] >TYK20211.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]) HSP 1 Score: 140.2 bits (352), Expect = 8.7e-30 Identity = 67/90 (74.44%), Postives = 75/90 (83.33%), Query Frame = 0
BLAST of Spg030266 vs. NCBI nr
Match: KAG6600744.1 (Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 139.0 bits (349), Expect = 1.9e-29 Identity = 65/90 (72.22%), Postives = 79/90 (87.78%), Query Frame = 0
BLAST of Spg030266 vs. ExPASy Swiss-Prot
Match: Q0DJV6 (Probable calcium-binding protein CML18 OS=Oryza sativa subsp. japonica OX=39947 GN=CML18 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 5.4e-06 Identity = 23/58 (39.66%), Postives = 34/58 (58.62%), Query Frame = 0
BLAST of Spg030266 vs. ExPASy Swiss-Prot
Match: Q8L3R2 (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana OX=3702 GN=CML41 PE=2 SV=2) HSP 1 Score: 49.7 bits (117), Expect = 2.0e-05 Identity = 25/72 (34.72%), Postives = 41/72 (56.94%), Query Frame = 0
BLAST of Spg030266 vs. ExPASy Swiss-Prot
Match: Q6L4D4 (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica OX=39947 GN=CML15 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 5.9e-05 Identity = 21/64 (32.81%), Postives = 35/64 (54.69%), Query Frame = 0
BLAST of Spg030266 vs. ExPASy Swiss-Prot
Match: Q84V36 (Polcalcin Che a 3 OS=Chenopodium album OX=3559 PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.3e-04 Identity = 21/54 (38.89%), Postives = 35/54 (64.81%), Query Frame = 0
BLAST of Spg030266 vs. ExPASy Swiss-Prot
Match: P58171 (Polcalcin Syr v 3 OS=Syringa vulgaris OX=34270 GN=SYRV3 PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.3e-04 Identity = 21/59 (35.59%), Postives = 38/59 (64.41%), Query Frame = 0
BLAST of Spg030266 vs. ExPASy TrEMBL
Match: A0A0A0KZR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639730 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 2.5e-30 Identity = 67/90 (74.44%), Postives = 76/90 (84.44%), Query Frame = 0
BLAST of Spg030266 vs. ExPASy TrEMBL
Match: A0A5A7VDB9 (Putative calcium-binding protein CML27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003480 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 4.2e-30 Identity = 67/90 (74.44%), Postives = 75/90 (83.33%), Query Frame = 0
BLAST of Spg030266 vs. ExPASy TrEMBL
Match: A5AWP8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_023174 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.5e-14 Identity = 41/84 (48.81%), Postives = 58/84 (69.05%), Query Frame = 0
BLAST of Spg030266 vs. ExPASy TrEMBL
Match: A0A5N6RQV2 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018544 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.2e-13 Identity = 39/75 (52.00%), Postives = 56/75 (74.67%), Query Frame = 0
BLAST of Spg030266 vs. ExPASy TrEMBL
Match: A0A438DYH7 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_081444 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.6e-13 Identity = 40/82 (48.78%), Postives = 56/82 (68.29%), Query Frame = 0
BLAST of Spg030266 vs. TAIR 10
Match: AT3G50770.1 (calmodulin-like 41 ) HSP 1 Score: 49.7 bits (117), Expect = 1.4e-06 Identity = 25/72 (34.72%), Postives = 41/72 (56.94%), Query Frame = 0
BLAST of Spg030266 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 45.1 bits (105), Expect = 3.6e-05 Identity = 21/62 (33.87%), Postives = 32/62 (51.61%), Query Frame = 0
BLAST of Spg030266 vs. TAIR 10
Match: AT1G18210.2 (Calcium-binding EF-hand family protein ) HSP 1 Score: 45.1 bits (105), Expect = 3.6e-05 Identity = 21/62 (33.87%), Postives = 32/62 (51.61%), Query Frame = 0
BLAST of Spg030266 vs. TAIR 10
Match: AT4G03290.1 (EF hand calcium-binding protein family ) HSP 1 Score: 45.1 bits (105), Expect = 3.6e-05 Identity = 18/58 (31.03%), Postives = 35/58 (60.34%), Query Frame = 0
BLAST of Spg030266 vs. TAIR 10
Match: AT1G73630.1 (EF hand calcium-binding protein family ) HSP 1 Score: 43.5 bits (101), Expect = 1.0e-04 Identity = 20/58 (34.48%), Postives = 31/58 (53.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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