Spg029710 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg029710
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein RTE1-HOMOLOG
Location	scaffold6: 9530075 .. 9531290 (-)
RNA-Seq Expression	Spg029710
Synteny	Spg029710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAATCTCTGATAACTACTGGAAAGTTAGTACTCAAAGTTTGGGCGTCTTTTGGTCCATGAAATGAGTTGATGAAACGAACTTTAGCTCTAACTCTTAATCTTTTGCGCGGATTCATTCAAACTTTGGTTGAACAGCCTAATTCCATTCTGCAAGATGAAGTTTATGCCTCTATCAAAACTTTCTTTTACGTGCTCGCTTGCTGCCACGAATCCCCCAAAAAGAGAAAAATGGATTAGCCGAGATTGTGAAATTGAGGGTACAAAAGTGGGATTTTTAAGTTTAGGTTAATTTTTCCCTGAAGCTCTGTGAAATTGAGGGTATTCATTTTATTTCAGGCAGTATCTTATGGCTTTGGAAATGGAATCAAGTAAGGACCCTGAGGATCAGCTGATGATTGAAGGAAATATCGCTCAGAATATGAAAATTGATCCCGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACGCCACTTCCTGTTATTTCTTGGCTTATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTAATCTTGGACTTTGCAGGGCCCAATTTTGTGTGTGTGGACAACTTCACATTTGGAGCAGTCGCACGGTATCTTCAAATCAGCAGAGAGAAGGTACATGCCAATTTCAACATTTGAACTAAAAATCGATCTTTTTCAGTCATCTTTCCCTCAATTTTGCTGTGTTGCCAAAATCCATGACATGATACTGAAAGGAACCTCTTTCCCTTTTGAAGTTTTTGGTCCATTTCTTACACAACTGATTTGATTGTAATCGACATGCAGTGTTGCATTTCCACTCATAGAAGTGAAGATGAATTCAGGGAAGTTGATCATGGTAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGATCCTACAATCTCTTAACTTGTAATTGTCATTCCTTTGTAGCCAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGCCGATGGGTCAGTAAAGGAGCTTTAGTCCGGACCTTTTTACCATTTGTTGTGGTATTCAGTATAGGACTTGCACTGGGGGGTACTACGTTCCTTACCTTTCTGGCATTCTTCACTTTCTTCCTGGTTGGTTGGTTCATTCTTGGTACTTACGTCTTCAAAAATCTGGTTCAGTTGTAA

mRNA sequence

ATGGCTGAATCTCTGATAACTACTGGAAAGCAGTATCTTATGGCTTTGGAAATGGAATCAAGTAAGGACCCTGAGGATCAGCTGATGATTGAAGGAAATATCGCTCAGAATATGAAAATTGATCCCGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACGCCACTTCCTGTTATTTCTTGGCTTATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTAATCTTGGACTTTGCAGGGCCCAATTTTGTGTGTGTGGACAACTTCACATTTGGAGCAGTCGCACGGTATCTTCAAATCAGCAGAGAGAAGTGTTGCATTTCCACTCATAGAAGTGAAGATGAATTCAGGGAAGTTGATCATGGTAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGATCCTACAATCTCTTAACTTGTAATTGTCATTCCTTTGTAGCCAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGCCGATGGGTCAGTAAAGGAGCTTTAGTCCGGACCTTTTTACCATTTGTTGTGGTATTCAGTATAGGACTTGCACTGGGGGGTACTACGTTCCTTACCTTTCTGGCATTCTTCACTTTCTTCCTGGTTGGTTGGTTCATTCTTGGTACTTACGTCTTCAAAAATCTGGTTCAGTTGTAA

Coding sequence (CDS)

ATGGCTGAATCTCTGATAACTACTGGAAAGCAGTATCTTATGGCTTTGGAAATGGAATCAAGTAAGGACCCTGAGGATCAGCTGATGATTGAAGGAAATATCGCTCAGAATATGAAAATTGATCCCGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACGCCACTTCCTGTTATTTCTTGGCTTATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTAATCTTGGACTTTGCAGGGCCCAATTTTGTGTGTGTGGACAACTTCACATTTGGAGCAGTCGCACGGTATCTTCAAATCAGCAGAGAGAAGTGTTGCATTTCCACTCATAGAAGTGAAGATGAATTCAGGGAAGTTGATCATGGTAGAGAAATTTCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAGTTCCAACACCGATCCTACAATCTCTTAACTTGTAATTGTCATTCCTTTGTAGCCAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTCAAGGGCCGATGGGTCAGTAAAGGAGCTTTAGTCCGGACCTTTTTACCATTTGTTGTGGTATTCAGTATAGGACTTGCACTGGGGGGTACTACGTTCCTTACCTTTCTGGCATTCTTCACTTTCTTCCTGGTTGGTTGGTTCATTCTTGGTACTTACGTCTTCAAAAATCTGGTTCAGTTGTAA

Protein sequence

MAESLITTGKQYLMALEMESSKDPEDQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQISREKCCISTHRSEDEFREVDHGREISTWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGALVRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL

Homology

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BLAST of Spg029710 vs. NCBI nr
Match: XP_031740651.1 (protein RTE1-HOMOLOG isoform X1 [Cucumis sativus])

HSP 1 Score: 452.6 bits (1163), Expect = 2.2e-123
Identity = 218/233 (93.56%), Postives = 228/233 (97.85%), Query Frame = 0


Query: 11  QYLMALEMESSKDPEDQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIG 70
           Q+ M+LEMESSKDPE+QLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIG
Sbjct: 5   QHFMSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIG 64

Query: 71  IGREDGVILDFAGPNFVCVDNFTFGAVARYLQISREKCCISTHRSEDEFREVDHGREIST 130
           IGREDGVILDFAGPNFVCVDNFTFGAVARYLQI+R+KCCIS HRSE+E REVDH REIST
Sbjct: 65  IGREDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREIST 124

Query: 131 WDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSK 190
           WDDALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSK
Sbjct: 125 WDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSK 184

Query: 191 GALVRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 244
           GA++RTFLPFVVVFSIGLALG TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 185 GAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 237

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BLAST of Spg029710 vs. NCBI nr
Match: XP_004146489.1 (protein RTE1-HOMOLOG isoform X2 [Cucumis sativus] >KGN53282.1 hypothetical protein Csa_014607 [Cucumis sativus])

HSP 1 Score: 449.9 bits (1156), Expect = 1.4e-122
Identity = 217/230 (94.35%), Postives = 226/230 (98.26%), Query Frame = 0


Query: 14  MALEMESSKDPEDQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 73
           M+LEMESSKDPE+QLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 74  EDGVILDFAGPNFVCVDNFTFGAVARYLQISREKCCISTHRSEDEFREVDHGREISTWDD 133
           EDGVILDFAGPNFVCVDNFTFGAVARYLQI+R+KCCIS HRSE+E REVDH REISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 134 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAL 193
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGA+
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 194 VRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 244
           +RTFLPFVVVFSIGLALG TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

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BLAST of Spg029710 vs. NCBI nr
Match: XP_038884143.1 (protein RTE1-HOMOLOG [Benincasa hispida] >XP_038884151.1 protein RTE1-HOMOLOG [Benincasa hispida])

HSP 1 Score: 446.0 bits (1146), Expect = 2.0e-121
Identity = 214/226 (94.69%), Postives = 223/226 (98.67%), Query Frame = 0


Query: 18  MESSKDPEDQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 77
           MESS DPE+QLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGREDGV
Sbjct: 1   MESSNDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 78  ILDFAGPNFVCVDNFTFGAVARYLQISREKCCISTHRSEDEFREVDHGREISTWDDALRR 137
           ILDFAGPNFVCVDNFTFGAVARYLQI+R+KCCISTHRSE+E REVDHGREISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISTHRSEEELREVDHGREISTWDDALRR 120

Query: 138 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGALVRTF 197
           STQEFQHRSYNLLTCNCHSFVANNLNRLGFR GGWNVVNLAALIFLKGRWVSKGA++RTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRIGGWNVVNLAALIFLKGRWVSKGAVIRTF 180

Query: 198 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 244
           LPFVVVF+IGLA+GGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 LPFVVVFNIGLAVGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 226

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BLAST of Spg029710 vs. NCBI nr
Match: XP_008452120.1 (PREDICTED: protein RTE1-HOMOLOG [Cucumis melo] >XP_016901175.1 PREDICTED: protein RTE1-HOMOLOG [Cucumis melo])

HSP 1 Score: 444.9 bits (1143), Expect = 4.5e-121
Identity = 215/230 (93.48%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 14  MALEMESSKDPEDQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 73
           M+LEMES+KDPE+QLMIEGNIAQ+MKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 74  EDGVILDFAGPNFVCVDNFTFGAVARYLQISREKCCISTHRSEDEFREVDHGREISTWDD 133
           EDGVILDFAGPNFVCVDNFTFGAVARYLQI+R+KCCIS HRSE+E REVD  REISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120

Query: 134 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAL 193
           ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGA+
Sbjct: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 194 VRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 244
           +RTFLPFVVVFSIGLALG TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

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BLAST of Spg029710 vs. NCBI nr
Match: XP_022136620.1 (protein RTE1-HOMOLOG [Momordica charantia])

HSP 1 Score: 441.8 bits (1135), Expect = 3.8e-120
Identity = 212/226 (93.81%), Postives = 220/226 (97.35%), Query Frame = 0


Query: 18  MESSKDPEDQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 77
           MES+ DPE+QLM+EGNIAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGREDGV
Sbjct: 1   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 78  ILDFAGPNFVCVDNFTFGAVARYLQISREKCCISTHRSEDEFREVDHGREISTWDDALRR 137
           ILDFAGPNFVCVDNFTFGAVARYLQI+ EKCCISTHRSEDE RE DHGREISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 120

Query: 138 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGALVRTF 197
           STQEFQHRSYNLLTCNCHSFVANNLNRLGFR+GGWNVVNLA LIFLKGRWVS GA++RTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 180

Query: 198 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 244
           LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 226

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BLAST of Spg029710 vs. ExPASy Swiss-Prot
Match: Q9SD42 (Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.6e-76
Identity = 142/235 (60.43%), Postives = 177/235 (75.32%), Query Frame = 0


Query: 19  ESSKDPEDQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 78
           E++ D E ++MI   ++  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 79  LDFAGPNFVCVDNFTFGAVARYLQISREKCCISTHRSED----------EFREVDHGREI 138
           LDFAGPNFVCVDNF FGAV+RY+QI++E   + + RS            E  E  H +E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 139 STWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWV 198
            TWDDALR+STQE+QH SYN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 199 SKGALVRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 244
           +K A+V++ LP ++V++IG+ LGG TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

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BLAST of Spg029710 vs. ExPASy Swiss-Prot
Match: F4ITL6 (Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RTE1 PE=1 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.6e-60
Identity = 120/243 (49.38%), Postives = 166/243 (68.31%), Query Frame = 0


Query: 16  LEMESSKDPEDQLMI----------EGNIAQNMKIDPERARFPCCIVWTPLPVISWLIPF 75
           ++++ S D ED+++           E ++    +ID ++++FPCCIVWTPLPV+SWL PF
Sbjct: 10  MDLKRSYDVEDRVVSVSIPSIIEADEADLWPLPEIDTKKSKFPCCIVWTPLPVVSWLAPF 69

Query: 76  IGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQISREKCCI----STHRSEDEFRE 135
           IGHIG+ REDGVILDFAG NF+ VD+F FG  ARYLQ+ R KCC+      H  +  F+ 
Sbjct: 70  IGHIGLCREDGVILDFAGSNFINVDDFAFGPPARYLQLDRTKCCLPPNMGGHTCKYGFKH 129

Query: 136 VDHGREISTWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGG---WNVVNLA 195
            D G    TWD+AL  ST+ F+H++YN+ TCNCHSFVAN LNRL +  GG   WN+VN+A
Sbjct: 130 TDFG-TARTWDNALSSSTRSFEHKTYNIFTCNCHSFVANCLNRLCY--GGSMEWNMVNVA 189

Query: 196 ALIFLKGRWVSKGALVRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFK 242
            L+ +KG+W++  ++VR+FLP  VV S+G+ L G  FL  L+ F+  L  WFI+ TY FK
Sbjct: 190 ILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLVGWPFLIGLSSFSLLLFAWFIIATYCFK 249

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BLAST of Spg029710 vs. ExPASy Swiss-Prot
Match: Q9H0R3 (Transmembrane protein 222 OS=Homo sapiens OX=9606 GN=TMEM222 PE=1 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-31
Identity = 70/172 (40.70%), Postives = 100/172 (58.14%), Query Frame = 0


Query: 40  IDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 99
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 100 YLQISREKCCISTHRSEDEFREVDHGREISTWDDALRRSTQEFQHRSYNLLTCNCHSFVA 159
           Y ++   +   S                 + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 YWKLDPAQVYASGP---------------NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 160 NNLNRLGFRTG-GWNVVNLAALIFLKGRWVSKGALVRTFLPFVVVFSIGLAL 211
             LN + +     WN+V L     L G++VS GA V+T+LPF+++  I L +
Sbjct: 165 LALNLMRYNNSTNWNMVTLCFFCLLYGKYVSVGAFVKTWLPFILLLGIILTV 201

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BLAST of Spg029710 vs. ExPASy Swiss-Prot
Match: Q8BVA2 (Transmembrane protein 222 OS=Mus musculus OX=10090 GN=Tmem222 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.8e-31
Identity = 69/172 (40.12%), Postives = 100/172 (58.14%), Query Frame = 0


Query: 40  IDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 99
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSAGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 100 YLQISREKCCISTHRSEDEFREVDHGREISTWDDALRRSTQEFQHRSYNLLTCNCHSFVA 159
           + ++   +   S                 + WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 FWKLDPGQVYASGP---------------NAWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 160 NNLNRLGFRTG-GWNVVNLAALIFLKGRWVSKGALVRTFLPFVVVFSIGLAL 211
             LN + +     WN+V L     + G++VS GA V+T+LPFV++  I L +
Sbjct: 165 LALNLMRYNNSTNWNMVTLCCFCLIYGKYVSVGAFVKTWLPFVLLLGIILTV 201

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BLAST of Spg029710 vs. ExPASy TrEMBL
Match: A0A0A0KXZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 6.7e-123
Identity = 217/230 (94.35%), Postives = 226/230 (98.26%), Query Frame = 0


Query: 14  MALEMESSKDPEDQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 73
           M+LEMESSKDPE+QLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 74  EDGVILDFAGPNFVCVDNFTFGAVARYLQISREKCCISTHRSEDEFREVDHGREISTWDD 133
           EDGVILDFAGPNFVCVDNFTFGAVARYLQI+R+KCCIS HRSE+E REVDH REISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 134 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAL 193
           ALRRSTQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGA+
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 194 VRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 244
           +RTFLPFVVVFSIGLALG TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]

BLAST of Spg029710 vs. ExPASy TrEMBL
Match: A0A1S4DZL7 (protein RTE1-HOMOLOG OS=Cucumis melo OX=3656 GN=LOC103493222 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.2e-121
Identity = 215/230 (93.48%), Postives = 225/230 (97.83%), Query Frame = 0


Query: 14  MALEMESSKDPEDQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 73
           M+LEMES+KDPE+QLMIEGNIAQ+MKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 74  EDGVILDFAGPNFVCVDNFTFGAVARYLQISREKCCISTHRSEDEFREVDHGREISTWDD 133
           EDGVILDFAGPNFVCVDNFTFGAVARYLQI+R+KCCIS HRSE+E REVD  REISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120

Query: 134 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAL 193
           ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGA+
Sbjct: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 194 VRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 244
           +RTFLPFVVVFSIGLALG TTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]

BLAST of Spg029710 vs. ExPASy TrEMBL
Match: A0A6J1C4G0 (protein RTE1-HOMOLOG OS=Momordica charantia OX=3673 GN=LOC111008280 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.8e-120
Identity = 212/226 (93.81%), Postives = 220/226 (97.35%), Query Frame = 0


Query: 18  MESSKDPEDQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 77
           MES+ DPE+QLM+EGNIAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGREDGV
Sbjct: 1   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 78  ILDFAGPNFVCVDNFTFGAVARYLQISREKCCISTHRSEDEFREVDHGREISTWDDALRR 137
           ILDFAGPNFVCVDNFTFGAVARYLQI+ EKCCISTHRSEDE RE DHGREISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 120

Query: 138 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGALVRTF 197
           STQEFQHRSYNLLTCNCHSFVANNLNRLGFR+GGWNVVNLA LIFLKGRWVS GA++RTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 180

Query: 198 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 244
           LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL
Sbjct: 181 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 226

[Close]

BLAST of Spg029710 vs. ExPASy TrEMBL
Match: A0A6J1FW19 (protein RTE1-HOMOLOG-like OS=Cucurbita moschata OX=3662 GN=LOC111447395 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.1e-116
Identity = 205/226 (90.71%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 18  MESSKDPEDQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 77
           M SS DPE+Q+MIEGN+ Q MKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV
Sbjct: 1   MGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 60

Query: 78  ILDFAGPNFVCVDNFTFGAVARYLQISREKCCISTHRSEDEFREVDHGREISTWDDALRR 137
           ILDFAGPNFVCVDNFTFGAVARYLQI+ +KCCISTHRSEDEFREVD+GREISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRR 120

Query: 138 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGALVRTF 197
           STQEFQHR+YNLLTCNCHSFVANNLNRLGF TGGWNVVNLAAL+FLKGRWVSKGA++RTF
Sbjct: 121 STQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTF 180

Query: 198 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 244
           LPF VVFSIG+A+ GTTFLTFLAFFTFFLVGWF+LGTYVFKNLVQL
Sbjct: 181 LPFGVVFSIGVAMVGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 226

[Close]

BLAST of Spg029710 vs. ExPASy TrEMBL
Match: A0A6J1J2Z1 (protein RTE1-HOMOLOG-like OS=Cucurbita maxima OX=3661 GN=LOC111481385 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.0e-115
Identity = 204/226 (90.27%), Postives = 216/226 (95.58%), Query Frame = 0


Query: 18  MESSKDPEDQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 77
           M SS DPE+Q+MIEGN+ Q MKIDPE ARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV
Sbjct: 1   MGSSNDPENQMMIEGNVVQEMKIDPESARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 60

Query: 78  ILDFAGPNFVCVDNFTFGAVARYLQISREKCCISTHRSEDEFREVDHGREISTWDDALRR 137
           ILDFA PNFVCVDNFTFGAVARYLQI+ +KCCISTHRSEDEFREVD+GREISTWDDALRR
Sbjct: 61  ILDFADPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRR 120

Query: 138 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGALVRTF 197
           STQEFQHR YNLLTCNCHSFVANNLNRLGF TGGWNVVNLAAL+FLKGRWVSKGA++RTF
Sbjct: 121 STQEFQHRPYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTF 180

Query: 198 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 244
           LPF VVFSIG+A+GGTTFLTFLAFFTFFLVGWF+LGTYVFKNLVQL
Sbjct: 181 LPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 226

[Close]

BLAST of Spg029710 vs. TAIR 10
Match: AT3G51040.1 (RTE1-homolog )

HSP 1 Score: 287.3 bits (734), Expect = 1.1e-77
Identity = 142/235 (60.43%), Postives = 177/235 (75.32%), Query Frame = 0


Query: 19  ESSKDPEDQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 78
           E++ D E ++MI   ++  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 79  LDFAGPNFVCVDNFTFGAVARYLQISREKCCISTHRSED----------EFREVDHGREI 138
           LDFAGPNFVCVDNF FGAV+RY+QI++E   + + RS            E  E  H +E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 139 STWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWV 198
            TWDDALR+STQE+QH SYN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 199 SKGALVRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 244
           +K A+V++ LP ++V++IG+ LGG TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]

BLAST of Spg029710 vs. TAIR 10
Match: AT3G51040.2 (RTE1-homolog )

HSP 1 Score: 287.3 bits (734), Expect = 1.1e-77
Identity = 142/235 (60.43%), Postives = 177/235 (75.32%), Query Frame = 0


Query: 19  ESSKDPEDQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 78
           E++ D E ++MI   ++  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 79  LDFAGPNFVCVDNFTFGAVARYLQISREKCCISTHRSED----------EFREVDHGREI 138
           LDFAGPNFVCVDNF FGAV+RY+QI++E   + + RS            E  E  H +E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 139 STWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWV 198
            TWDDALR+STQE+QH SYN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 199 SKGALVRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 244
           +K A+V++ LP ++V++IG+ LGG TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]

BLAST of Spg029710 vs. TAIR 10
Match: AT3G51040.3 (RTE1-homolog )

HSP 1 Score: 287.3 bits (734), Expect = 1.1e-77
Identity = 142/235 (60.43%), Postives = 177/235 (75.32%), Query Frame = 0


Query: 19  ESSKDPEDQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 78
           E++ D E ++MI   ++  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 79  LDFAGPNFVCVDNFTFGAVARYLQISREKCCISTHRSED----------EFREVDHGREI 138
           LDFAGPNFVCVDNF FGAV+RY+QI++E   + + RS            E  E  H +E 
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKE- 122

Query: 139 STWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWV 198
            TWDDALR+STQE+QH SYN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV
Sbjct: 123 PTWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWV 182

Query: 199 SKGALVRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 244
           +K A+V++ LP ++V++IG+ LGG TF+   +     L GWFI+GTY FK L+QL
Sbjct: 183 NKTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]

BLAST of Spg029710 vs. TAIR 10
Match: AT2G26070.1 (Protein of unknown function (DUF778) )

HSP 1 Score: 234.2 bits (596), Expect = 1.1e-61
Identity = 120/243 (49.38%), Postives = 166/243 (68.31%), Query Frame = 0


Query: 16  LEMESSKDPEDQLMI----------EGNIAQNMKIDPERARFPCCIVWTPLPVISWLIPF 75
           ++++ S D ED+++           E ++    +ID ++++FPCCIVWTPLPV+SWL PF
Sbjct: 10  MDLKRSYDVEDRVVSVSIPSIIEADEADLWPLPEIDTKKSKFPCCIVWTPLPVVSWLAPF 69

Query: 76  IGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQISREKCCI----STHRSEDEFRE 135
           IGHIG+ REDGVILDFAG NF+ VD+F FG  ARYLQ+ R KCC+      H  +  F+ 
Sbjct: 70  IGHIGLCREDGVILDFAGSNFINVDDFAFGPPARYLQLDRTKCCLPPNMGGHTCKYGFKH 129

Query: 136 VDHGREISTWDDALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGG---WNVVNLA 195
            D G    TWD+AL  ST+ F+H++YN+ TCNCHSFVAN LNRL +  GG   WN+VN+A
Sbjct: 130 TDFG-TARTWDNALSSSTRSFEHKTYNIFTCNCHSFVANCLNRLCY--GGSMEWNMVNVA 189

Query: 196 ALIFLKGRWVSKGALVRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILGTYVFK 242
            L+ +KG+W++  ++VR+FLP  VV S+G+ L G  FL  L+ F+  L  WFI+ TY FK
Sbjct: 190 ILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLVGWPFLIGLSSFSLLLFAWFIIATYCFK 249

The following BLAST results are available for this feature:

BLAST of Spg029710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740651.1	2.2e-123	93.56	protein RTE1-HOMOLOG isoform X1 [Cucumis sativus]	[more]
XP_004146489.1	1.4e-122	94.35	protein RTE1-HOMOLOG isoform X2 [Cucumis sativus] >KGN53282.1 hypothetical prote...	[more]
XP_038884143.1	2.0e-121	94.69	protein RTE1-HOMOLOG [Benincasa hispida] >XP_038884151.1 protein RTE1-HOMOLOG [B...	[more]
XP_008452120.1	4.5e-121	93.48	PREDICTED: protein RTE1-HOMOLOG [Cucumis melo] >XP_016901175.1 PREDICTED: protei...	[more]
XP_022136620.1	3.8e-120	93.81	protein RTE1-HOMOLOG [Momordica charantia]	[more]

BLAST of Spg029710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD42	1.6e-76	60.43	Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1	[more]
F4ITL6	1.6e-60	49.38	Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
Q9H0R3	1.5e-31	40.70	Transmembrane protein 222 OS=Homo sapiens OX=9606 GN=TMEM222 PE=1 SV=2	[more]
Q8BVA2	5.8e-31	40.12	Transmembrane protein 222 OS=Mus musculus OX=10090 GN=Tmem222 PE=1 SV=1	[more]

BLAST of Spg029710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXZ7	6.7e-123	94.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1	[more]
A0A1S4DZL7	2.2e-121	93.48	protein RTE1-HOMOLOG OS=Cucumis melo OX=3656 GN=LOC103493222 PE=4 SV=1	[more]
A0A6J1C4G0	1.8e-120	93.81	protein RTE1-HOMOLOG OS=Momordica charantia OX=3673 GN=LOC111008280 PE=4 SV=1	[more]
A0A6J1FW19	2.1e-116	90.71	protein RTE1-HOMOLOG-like OS=Cucurbita moschata OX=3662 GN=LOC111447395 PE=4 SV=...	[more]
A0A6J1J2Z1	1.0e-115	90.27	protein RTE1-HOMOLOG-like OS=Cucurbita maxima OX=3661 GN=LOC111481385 PE=4 SV=1	[more]

BLAST of Spg029710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51040.1	1.1e-77	60.43	RTE1-homolog	[more]
AT3G51040.2	1.1e-77	60.43	RTE1-homolog	[more]
AT3G51040.3	1.1e-77	60.43	RTE1-homolog	[more]
AT2G26070.1	1.1e-61	49.38	Protein of unknown function (DUF778)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008496	TMEM222/RTE1	PFAM	PF05608	DUF778	coord: 56..105 e-value: 1.2E-20 score: 74.7 coord: 113..187 e-value: 2.5E-19 score: 70.4
IPR008496	TMEM222/RTE1	PANTHER	PTHR20921	UNCHARACTERIZED	coord: 11..243
None	No IPR available	PANTHER	PTHR20921:SF5	SUBFAMILY NOT NAMED	coord: 11..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg029710.1	Spg029710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010104	regulation of ethylene-activated signaling pathway
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane