Spg029564 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg029564
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein PIR isoform X2
Location	scaffold2: 21730765 .. 21732969 (+)
RNA-Seq Expression	Spg029564
Synteny	Spg029564

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGACCGGACGGGACGGATGGCAGTGGCGGCGAGCTTCGACAGCAACGGTGGTGGCGGCGAGCTTCAACGGAGACAGCAGCTGGAGGCTAGGGTTAGGGTAGGGTTTTTTTATTAGGACCAGTTACATCCATGTCGTAAGTAACGTACTTGTTTGTTTAGGTTAATTTAAAAGGAGGTTTAAAAAGATAAAAGAAAAGAAACCCTTAAACTTACGATGAACCAAAAAAAAAGGTGGGTGAGCAACTTCTGGTGGCAATTGCAACAAGGGGCGGAAATTGCAACCAGCGACGCGGTGGCGAATTAGACGGACGATGCCAACCATGACAAAGTGAGAAGAAAAGAGGCCAACGGAAATCGTGAAGAAGAAGACTCAAAGGCTACTGTGTTTCGAAATCGTGAAGAAAACTGGTTCTCGATAGGGTTTGAGGTTTCTGTGTTTTCTATTTCTCTCTCTCTTTGTTTTTTTATTAAACAGCAGCCTAGACTCCAGATAATTGGGCTTCAATTCGGAAACAATCTTTTAAATTTTGAAACGAGCATATCTGTGGGCGTGTCCGAAAATTTTAAAAAAAAAAAAAAAACAGGACACACAAAATTGTGTGTCTGACACGTGTCCAGAGCGTGTCCAGATGAATCCGTGTCCGACACAGATCCTCCCTCCATTTTAGCGTGTCCGTGCTTCCTAGGATGGAGGTGAATCAATAAAGGGCTCACAAGAGGAGCGAATGGTGTAAAGAAGAAAATCATCATCTTCCTCATTTTGCTCCCTTCTTTCTAGTAGTGTGCTAGTTTGGGTCATATCAGGTTTGCTTTGTTGTGTTTGAAAGCCATATTTTTTTTTTGGAACTTTAGGGTTTGTTGTGATTCAGATTTCAGGTCTATTTTGGTTTTTTTTTTTTGTTGAGGTTATGGTTGAGAAAAGGCTTTAGTGTTGTCCAAGATGATTCCAATGGTGTCCAAGATTGTAGAACATAAGCTCAATGGTTCTAAGCAATGTTTTAAAAGGCTTACGCCTCGAGGCTCGCCTCGAGGTAAAGCTCTAATTTTTAGCCTCGAGACTTACGCCTTTTTAAATCATAAGAGGCTTGCGCCTTTATAAAACCCATCATTGATAATTGCTGAAAAACTTGGATGAAGTGGCCAAAAATGTCCATAGTGAGACTACTGATACCCACAAATGAACACATGGAAAAATAGCAACCAAAGTTGTTTATGGAGACCCACCACACACAAACAAAGATGGTGTGCGGCTAGGGTGACTGCAAGCGGACGAACGGCAATGAAAGATTGGTGGCAAAAGAGCAGCGGCGAGCAAACAGTTGCAAATAAGAGTGACGGTTGCAAATGAGAGCAACGACTGTGAACATTACAAATGAACGGCTGTGAACAACACAAACAAGGACTAGTCGGTGCCGACAAGGTTGTCGTTGGTAGAAGTGTTGCTGGAAGAAGAAATCACGAATGGGAGTTTGACGGTGAGGGTTTTGTGTTGTGGTTAGGGTTTCTAATAGCTAGGGTTTGAATTTAGGGTTAGGCTCTAATACCATGTCACTTTTTGTTTTTTGAGAAAATCTCATTGTATTTACTAAAACTCCAAATTACAAGAAGATATAATGCAATGGACATAAAAGGAAACTAGCTATATTGAGCAAAGAATATTAGCTAATACATGTAAGATAAAAATAGAATACTATCTAATCTAAATAAAGAAAATATTTCAAAAATGAAATAAATCTACACTTTACCACTATAATACACTTACAGCATTGCACTAAGAAGAAATTTATTATATTGTTATTGTCGAAGTATCAGGAATATTATCCGAAAAATAAAGCAATCTAGTAGTAAATAGGGACTAGGGAAGAACTTCTATTATAGATAATTTCAACTAACCTGTGTTGTTTTAAATAATGCAGCCTTAAGTAACCTATATTGATGTTAAAGTCCTGATGCAACATTATTTGTACTGAGTTCAGGTTGCATGAGATCGATCAATGAAAGTCTTAACTGGGAGGCAAAGTCAGAGCTCAGATTGGAGGTCCTGCATGGAATAAAGGAGATTGGAAGTGTATTATATTTGATTAGCCTTCTTGATATCGTGCTGGTCAGTATTTTCTCTGTTCTCGTTTTGAAATTGTGCAAAAGGATATGTACTTCTGCAATTTCTATTTCTGAAGTAAGATTTAGAAGTCTTTATTAA

mRNA sequence

ATGGCTGACCGGACGGGACGGATGGCAGTGGCGGCGAGCTTCGACAGCAACGGTGGTGGCGGCGAGCTTCAACGGAGACAGCAGCTGGAGGCTAGGGTTAGGGTAGGAGCGTGTCCAGATGAATCCGTGTCCGACACAGATCCTCCCTCCATTTTAGCTGTGCTAGTTTGGGTCATATCAGAAAAGGCTTTAGTGTTGTCCAAGATGATTCCAATGGTGTCCAAGATTGTAGAACATAAGCTCAATGGTTCTAAGCAATGTTTTAAAAGGCTTACGCCTCGAGGCTCGCCTCGAGGTTGCATGAGATCGATCAATGAAAGTCTTAACTGGGAGGCAAAGTCAGAGCTCAGATTGGAGGTCCTGCATGGAATAAAGGAGATTGGAAGTGTATTATATTTGATTAGCCTTCTTGATATCGTGCTGGTCAGTATTTTCTCTGTTCTCGTTTTGAAATTGTGCAAAAGGATATGTACTTCTGCAATTTCTATTTCTGAAGTAAGATTTAGAAGTCTTTATTAA

Coding sequence (CDS)

ATGGCTGACCGGACGGGACGGATGGCAGTGGCGGCGAGCTTCGACAGCAACGGTGGTGGCGGCGAGCTTCAACGGAGACAGCAGCTGGAGGCTAGGGTTAGGGTAGGAGCGTGTCCAGATGAATCCGTGTCCGACACAGATCCTCCCTCCATTTTAGCTGTGCTAGTTTGGGTCATATCAGAAAAGGCTTTAGTGTTGTCCAAGATGATTCCAATGGTGTCCAAGATTGTAGAACATAAGCTCAATGGTTCTAAGCAATGTTTTAAAAGGCTTACGCCTCGAGGCTCGCCTCGAGGTTGCATGAGATCGATCAATGAAAGTCTTAACTGGGAGGCAAAGTCAGAGCTCAGATTGGAGGTCCTGCATGGAATAAAGGAGATTGGAAGTGTATTATATTTGATTAGCCTTCTTGATATCGTGCTGGTCAGTATTTTCTCTGTTCTCGTTTTGAAATTGTGCAAAAGGATATGTACTTCTGCAATTTCTATTTCTGAAGTAAGATTTAGAAGTCTTTATTAA

Protein sequence

MADRTGRMAVAASFDSNGGGGELQRRQQLEARVRVGACPDESVSDTDPPSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESLNWEAKSELRLEVLHGIKEIGSVLYLISLLDIVLVSIFSVLVLKLCKRICTSAISISEVRFRSLY

Homology

[Close]

BLAST of Spg029564 vs. NCBI nr
Match: KAG7023906.1 (Protein PIR, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-12
Identity = 53/93 (56.99%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 49  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESL 108
           P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+L
Sbjct: 889 PWLIRALLDHISNKIAVLEPMISGLQEALPRSIG-------LLPFDGGVAGCMRSINENL 948

Query: 109 NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 142
           NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Sbjct: 949 NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 974

[Close]

BLAST of Spg029564 vs. NCBI nr
Match: XP_022961250.1 (protein PIR isoform X1 [Cucurbita moschata] >XP_022961251.1 protein PIR isoform X1 [Cucurbita moschata] >XP_022961252.1 protein PIR isoform X1 [Cucurbita moschata])

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-12
Identity = 53/93 (56.99%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 49   PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESL 108
            P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+L
Sbjct: 939  PWLIRALLDHISNKIAVLEPMISGLQEALPRSIG-------LLPFDGGVAGCMRSINENL 998

Query: 109  NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 142
            NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Sbjct: 999  NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 1024

[Close]

BLAST of Spg029564 vs. NCBI nr
Match: XP_022961253.1 (protein PIR isoform X2 [Cucurbita moschata])

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-12
Identity = 53/93 (56.99%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 49  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESL 108
           P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+L
Sbjct: 787 PWLIRALLDHISNKIAVLEPMISGLQEALPRSIG-------LLPFDGGVAGCMRSINENL 846

Query: 109 NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 142
           NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Sbjct: 847 NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 872

[Close]

BLAST of Spg029564 vs. NCBI nr
Match: XP_022988011.1 (protein PIR isoform X3 [Cucurbita maxima])

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-12
Identity = 53/93 (56.99%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 49  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESL 108
           P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+L
Sbjct: 737 PWLIRALLDHISNKIAVLEPMISGLQEALPRSIG-------LLPFDGGVAGCMRSINENL 796

Query: 109 NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 142
           NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Sbjct: 797 NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 822

[Close]

BLAST of Spg029564 vs. NCBI nr
Match: XP_022961254.1 (protein PIR isoform X3 [Cucurbita moschata])

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-12
Identity = 53/93 (56.99%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 49  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESL 108
           P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+L
Sbjct: 737 PWLIRALLDHISNKIAVLEPMISGLQEALPRSIG-------LLPFDGGVAGCMRSINENL 796

Query: 109 NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 142
           NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Sbjct: 797 NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 822

[Close]

BLAST of Spg029564 vs. ExPASy Swiss-Prot
Match: Q5S2C3 (Protein PIR OS=Arabidopsis thaliana OX=3702 GN=PIR PE=1 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 1.3e-08
Identity = 42/93 (45.16%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 49   PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESL 108
            P ++  L+  IS K   L    PM+S + E       +    L+  G   GCM+ I E L
Sbjct: 936  PWLIRALLDHISNKITTLE---PMISGLQE----ALPKSIGLLSFDGGVTGCMKLIREQL 995

Query: 109  NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 142
            NW  KSEL+ EVL GIKEIGSV+Y + LLDIVL
Sbjct: 996  NWGTKSELKSEVLRGIKEIGSVIYTMGLLDIVL 1021

[Close]

BLAST of Spg029564 vs. ExPASy TrEMBL
Match: A0A6J1JL09 (protein PIR isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485378 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 5.3e-13
Identity = 53/93 (56.99%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 49   PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESL 108
            P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+L
Sbjct: 939  PWLIRALLDHISNKIAVLEPMISGLQEALPRSIG-------LLPFDGGVAGCMRSINENL 998

Query: 109  NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 142
            NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Sbjct: 999  NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 1024

[Close]

BLAST of Spg029564 vs. ExPASy TrEMBL
Match: A0A6J1H9U6 (protein PIR isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461814 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 5.3e-13
Identity = 53/93 (56.99%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 49   PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESL 108
            P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+L
Sbjct: 939  PWLIRALLDHISNKIAVLEPMISGLQEALPRSIG-------LLPFDGGVAGCMRSINENL 998

Query: 109  NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 142
            NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Sbjct: 999  NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 1024

[Close]

BLAST of Spg029564 vs. ExPASy TrEMBL
Match: A0A6J1JKE8 (protein PIR isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485378 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 5.3e-13
Identity = 53/93 (56.99%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 49  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESL 108
           P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+L
Sbjct: 787 PWLIRALLDHISNKIAVLEPMISGLQEALPRSIG-------LLPFDGGVAGCMRSINENL 846

Query: 109 NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 142
           NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Sbjct: 847 NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 872

[Close]

BLAST of Spg029564 vs. ExPASy TrEMBL
Match: A0A6J1JG02 (protein PIR isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111485378 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 5.3e-13
Identity = 53/93 (56.99%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 49  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESL 108
           P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+L
Sbjct: 737 PWLIRALLDHISNKIAVLEPMISGLQEALPRSIG-------LLPFDGGVAGCMRSINENL 796

Query: 109 NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 142
           NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Sbjct: 797 NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 822

[Close]

BLAST of Spg029564 vs. ExPASy TrEMBL
Match: A0A6J1HBA3 (protein PIR isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461814 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 5.3e-13
Identity = 53/93 (56.99%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 49  PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESL 108
           P ++  L+  IS K  VL  MI  + + +   +         L   G   GCMRSINE+L
Sbjct: 787 PWLIRALLDHISNKIAVLEPMISGLQEALPRSIG-------LLPFDGGVAGCMRSINENL 846

Query: 109 NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 142
           NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL
Sbjct: 847 NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 872

[Close]

BLAST of Spg029564 vs. TAIR 10
Match: AT5G18410.1 (transcription activators )

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-10
Identity = 44/95 (46.32%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 49   PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESL 108
            P ++  L+  IS K   L    PM+S + E       +    L+  G   GCM+ I E L
Sbjct: 936  PWLIRALLDHISNKITTLE---PMISGLQE----ALPKSIGLLSFDGGVTGCMKLIREQL 995

Query: 109  NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVLVS 144
            NW  KSEL+ EVL GIKEIGSV+Y + LLDIVLVS
Sbjct: 996  NWGTKSELKSEVLRGIKEIGSVIYTMGLLDIVLVS 1023

[Close]

BLAST of Spg029564 vs. TAIR 10
Match: AT5G18410.3 (transcription activators )

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-10
Identity = 44/95 (46.32%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 49   PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESL 108
            P ++  L+  IS K   L    PM+S + E       +    L+  G   GCM+ I E L
Sbjct: 936  PWLIRALLDHISNKITTLE---PMISGLQE----ALPKSIGLLSFDGGVTGCMKLIREQL 995

Query: 109  NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVLVS 144
            NW  KSEL+ EVL GIKEIGSV+Y + LLDIVLVS
Sbjct: 996  NWGTKSELKSEVLRGIKEIGSVIYTMGLLDIVLVS 1023

[Close]

BLAST of Spg029564 vs. TAIR 10
Match: AT5G18410.2 (transcription activators )

HSP 1 Score: 61.2 bits (147), Expect = 9.2e-10
Identity = 42/93 (45.16%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 49   PSILAVLVWVISEKALVLSKMIPMVSKIVEHKLNGSKQCFKRLTPRGSPRGCMRSINESL 108
            P ++  L+  IS K   L    PM+S + E       +    L+  G   GCM+ I E L
Sbjct: 936  PWLIRALLDHISNKITTLE---PMISGLQE----ALPKSIGLLSFDGGVTGCMKLIREQL 995

Query: 109  NWEAKSELRLEVLHGIKEIGSVLYLISLLDIVL 142
            NW  KSEL+ EVL GIKEIGSV+Y + LLDIVL
Sbjct: 996  NWGTKSELKSEVLRGIKEIGSVIYTMGLLDIVL 1021

The following BLAST results are available for this feature:

BLAST of Spg029564 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023906.1	1.1e-12	56.99	Protein PIR, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022961250.1	1.1e-12	56.99	protein PIR isoform X1 [Cucurbita moschata] >XP_022961251.1 protein PIR isoform ...	[more]
XP_022961253.1	1.1e-12	56.99	protein PIR isoform X2 [Cucurbita moschata]	[more]
XP_022988011.1	1.1e-12	56.99	protein PIR isoform X3 [Cucurbita maxima]	[more]
XP_022961254.1	1.1e-12	56.99	protein PIR isoform X3 [Cucurbita moschata]	[more]

BLAST of Spg029564 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5S2C3	1.3e-08	45.16	Protein PIR OS=Arabidopsis thaliana OX=3702 GN=PIR PE=1 SV=2	[more]

BLAST of Spg029564 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JL09	5.3e-13	56.99	protein PIR isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485378 PE=4 SV=1	[more]
A0A6J1H9U6	5.3e-13	56.99	protein PIR isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461814 PE=4 SV=1	[more]
A0A6J1JKE8	5.3e-13	56.99	protein PIR isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485378 PE=4 SV=1	[more]
A0A6J1JG02	5.3e-13	56.99	protein PIR isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111485378 PE=4 SV=1	[more]
A0A6J1HBA3	5.3e-13	56.99	protein PIR isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461814 PE=4 SV=1	[more]

BLAST of Spg029564 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18410.1	1.4e-10	46.32	transcription activators	[more]
AT5G18410.3	1.4e-10	46.32	transcription activators	[more]
AT5G18410.2	9.2e-10	45.16	transcription activators	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008081	Cytoplasmic FMR1-interacting	PFAM	PF05994	FragX_IP	coord: 72..142 e-value: 6.2E-6 score: 24.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg029564.1	Spg029564.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030833	regulation of actin filament polymerization
molecular_function	GO:0031267	small GTPase binding