Spg029357 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg029357
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold12: 32609572 .. 32617288 (+)
RNA-Seq ExpressionSpg029357
SyntenySpg029357
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGTCACGGATGCCGAAAGAGCTTGCGTGTTTCATCTACGAGAAGGAACAATTGACGAATCGAAACAAAAACTGGAGAATGTCATCCTGTGCAAAGTCTTTACAAGCAAAACGATCAACCCTGAGATGTTCTGCTCCAAAATGCCAAAGATTTGGAGTCAGGAGCAAACGATGATAGCTTGCGTTGGATTCAACCTGTTTTTATGCAAATTCAAAAACGCGTGTATAAAAGGCAAAATCATCGAATCTGGACTGTGGTTCTTCGACAAAGCTATGCTTCTAATGGAGGACCCAAAAGGAGACAGTTGTGGCGAGGAAACGGAGTTCAGGTACGTTTCTTTCTGGATTCATTTTCATAAACTTCCATTTGCATGTTTTTCTAGGAACACAACAATGGAAATTGGAAGCCAATTGGAGAAAGTAGAACAAATTGATCTCGAGGATGGAACTGAGCAACATTGGGGCATATCGTTAAGGATAAAGATTCAAGTAGAGGTCAGTTCACCATTAAAATGTGGTATTTTTTTAAAAAAATGAAAAATGAGGGGCTGATAAATAGATAAAAGTTACATACGAAAAGCTGCCGGATTTTTGCTATGGATGTGGATTATTGGGTCATACAATCAAAGAATGTGGTGTAGAGTGTGGATCCAATGAAGATGATCTACCAGACGGTCCATTTCTACGGGAACCATCTAAATTGGTGAATTATCATTACAACTATTTTGAGAGAGGTCACATCCATGGAAGGGGAAGAGGAAGTGGGAGAGATGGTGGATGAGGAAATAAGAGAAAAGGACATAGGTAATTCGGTGACTAAAGTTGGTGGTCGGCCGGTAGCACCCGAACACATGCTGGAATCTTCACGGAAAGTAGAGAAGAACCAAACGCCGGCAAGGAAGGTAACAGATTGTTTGTCCGAAAAGGAAAAGGCGAAAAATCCGAAGCAAGGCAATAAATTGGACGAGAATAATGGGATAGAGATTTCGTCGGGTTCAAAAGATCATACTGAAGGGGATAAAAGCCCCTACGCAGCGGAAGCGCATCGATTGGACCTTACGCCGTATATTAATTAACATTAAAATACCGTTACGAAAACTCAAACAAACTTTAAACACACTTTAAAGTTGCTGGAAAATCAGTTTAAACATGCTGAAAAATAAATCTAAATTTATTTTCATGCTTTTCTAAAGAAAAGGGGAAGAACCGTTACAAACCTTCATTGAAGACTTGACCGTTCTTCGCCAACGACGCTCCAACGGACAAAAACGCAGCAGCCTTCTTTTCTTCTAATCGCTGGAAATTTCTTCTTGAATGACACAATAACCACAGAGGTTACACCGGTATGTCTCTAAGTCTAGGAGGCAAAAGACTTGTGGGAGTCTTTCTCTAAGAGGGAGGCTAGAGAGAATTCTAGGTCTTGTCTTAAGAGTCTAAGAGCAAGAGCAGAGTGTCATAGACCAATTAGGTCTAGTGTTCTATTTATAGAAGAGAGGCCATGAATAAAATATTCAATTAAATCAATCTTTTTTTTTCTGAGGAGAAAATTAAATCAATCTTTTCCAAAATTGATTCAATCTTATTCCTTATTTAATTAATCATGATCAATCAATTCCATAATTGATTAATCTTTTCCACAAATGACTAATTACTTCCATAAGTGATTAGATCATTTCCATAAATGATTAATCACTTCCTTAAGTGATTAATTATTTCCATAATTGATTAATTCCCGGTTAATAAATTCTTTAATTAATTGACCACCAATTAAATATCACATATTTAATTTCCGGCCTTGAATTAATTAATTTTGCCCAAATAGATTTTAGGCATTAAATTAATTAATTCATTATTTGAACTCTTTCAAACTTCCATAAATTTATATTTGAATTTCTTCAAATACTAATTTCTCTCATAATAATATATCAATATATATTATATTTGTTTCCCTTAGTAAATTGAACATTTTCAATTTACTTTTATTACTTAGTTGCCTCAAATTACTTTATGAGCTACCAGTGGGACCTAATGGACCTGCAGATCAGAAGCTCCAACGATGTGAGATTAATTGGTCAAACTCATTAACCACATTAATCAATATTCGTTAACTGTGTGTACATTCCACTATAGACTCACAATTGCATTCTTCTCACTGCAGACATATTTTCTGTGTCCACGGATCTAGACCAATATCGACTAGTTAGTCCTTCACGAGTGTCCGTAACACCAGCTGGGTCAAATTACCGTTTTACCCCTGGGTTACTTCTATTTCCTTAAGTACCAGTTCTCCTCTAATGAACAACTTGTTTGTGGTCCAACCATCAAACAGAAAACCCTCTCGTGCCATTGAGAGGGTAGGGCCCTTTGTTCAAGACTCGGAGTAACCACTTAAGGGAACACTCATTTGCTTCCCTAAAGTCGGGAAGGAGTGAATTCCATCTTGTACGATTATGTTCTCAGCTCCCCATTCGGTCTTGTCCCCAAAATGGTAGGCTTATTGAGTCGGCGTATTGGCCACTCTCACCCATATAAATCAAAGGACAATCTCTCATGAGCAGGAGTCCATAATCAACTCAGGATTAAGACTAAGTTGTCTAGGTCGTCCTAGTGAAATAGAAAACCAACTAGTTAACGGTGTTATAACCAGTGGTTACTATTTCGCGGTCCGGTCTTATGCAAACTCATTGCATAGGATACCCCCACTCGCATGTCTCCCACACGAACGCGTTGGATCGCAGCGTTTGTATCAAATACAAAGTGGGCCGTATCCATAGTGTCACTAGGATAAGGCAACCAGTCTTATCCCTATACTATAGACCCTTTAGGCTGTTTCTTGAACAATGATCCCATATGTCACTACATATAGTTCAAGACTCATATTACAGCCTTGGATGTCTAGTTTATTGGATTAGGGTTATTTTTAGGCAAAGACAAATATAAAATAACTAATAACAATTAATGGAAAAATATATCAATATTATTTCATTAATATCCGGTCAACAGTTACATTCACTATCTACGAGTTTTAGGGCATAAAACCCAACACATACCATCACAACGACTCTCAATAATAAACACATTGACTTCCCTTTAATGGATATTGACCATTTTCACGATGGGCCTACAGAGGTTAGTAAAATGGAGGACCTACAGAATAAAGGCCCACACACTGGAAAAGACCAAAACATATTAGATTCTATTGAGATCTAAGATGACAGCACAAAGGGCAATGTTTCTAAGCAGAAAGAATTTTTAAAGGAAAGAGCTTTTATAAATGGGCCAAAGTCGGAAATAGGCAAAGGGAAGGAAGTAAACAAGAGTCAGGAAGAGAGCAGTAAGGTTAGAACCTGGAAGAGAGTGTATAAAATGTCAGATGTAGACAATGGACGGGAGACACAATTGAAGCAAATTAAGGAGGAAAGGCAGGAAACACAGTATTGAATTTGAGGAAGAAGAATCAAGAAGGAAGAAAGTGTTGGTTACTGATGAACAAAACATTGCACTATCGATGGAGGCTGTTGAGCAGCCCTGCCGAGCACAATGAAAATTTTAAGTTGGAATGTCCAAGGGTTGGGGAACCCAAGGACATTCAGAGCGTTACATCATCTAATCCGTAGCCAAAATCGCCAAATGATATTCTTGATGGAAACAAGGATAAGAGGAAGTAATATTGATAAAATTAGGAGAGAGTTGGATCTTGAATGTGGGATATCTGTCCCAAGTGAAGGGCTAAGTGGAGGTTTGCTTTTGCTTTGAAAGATTGAAACTGATGTTACTATTAGATCTTTTTCGAAAGGGCATATTGACGCGGTGGTTAAAGAGAAGGATTGGCATTGGAGGTTCTCTGGCATCTATGGCAACCCCAATAGAGATATGCATCATACTACTTGGACTTTGATGAATCGACTAAAAGAGGGATGTAGTCTCCCTTGGATTGTAGGAGGAGATTTTAACGAGATCACTAATCAGAATGAGAAAAAAGGAGGTATGACGAAAGCAGAGTTGGATATGCAAGAGTTCCGTGATATTATAGACGAATGTGCGCTTCACGATCCTGGATATATTGGCCCTGAATTCACATGGTGTAATAACCATGTCAATGGCCAGATGATTTGGGAGCGGTTGGATCGGCTCCTTCTTACTCATGATATGCAAGAGAAGTGTAGCTTATTTAAAGTCTTTCACTTATCATGGATTGCGTCGGATCATAGGCCAATTTTGGCTGAATGGTTTGAAGATAAAAGGGTTAAGAGGAAATGGGAGATAAAAAGGCCTAGACGGTTTGAGGAGATGTGGGTTAAATATGAGGAGTGCAAGGACATAGTTCGTAGGGTTTGGCAGGAGAGTGGAGACAGGATGCCTGGTAACATTATGAATAAAACTAGGGATTGTCTCGAGAGATTAGGGAACTGGAGCAGGTACAGGTATGGGGGTTTTATCAGAGGGGCTATTTCTAAGAAGGAAAAGGAGATTCAGAGCCTAGCTAGCAGTGCGGATAAGGAAAGTATAAGGAAGATTCGCGAGAAGGAAAAAGAGCTGGAAATGTTGCTAGAGGATGATGAAATCTACTGGAGACAGAGAGCCCGAGAGGATTGGCTTCAGTGGGGAGATCGGAATACGAAATGGTTCCACATGAAGGCAAATCAGCGGAGGAAAGTTAATAAGATCAATGGCTTATTTGATGAAGGAAATCAGTGGATTGAAGAGGATTCAAAGATGGAGAATATAGCAAATCATTATTTCCAAGGTCTTTTTCGTACATCTACTCCCCATATAGATGCAATAAGTCAAGTTGTGGGATCCATCCCCTCATTGATATATGAGGACCAAAATTCTGAGCTCTTAAAAGCATTTACCAAAGAAGAGATTACAGCTGTGGTGAAGGGTATGGCTCCTACAAAGGCTCCAGGCCCAGATGGAATGCAGGCAGTTTTTTATAAAAAAATATTGGGATATTGTGGGTGAAGATACATGCAACTTCTGTTTACAGGTTCTTAATGGAAGGGCAGTATTGAGTCAGATCAACAGTATTTATATTGTTCTTATCCCTAAAATAAAAGATCCTAAGAATATGAAGGATTTTAGACCCATTAGCCTGTGCTCAGTCCTGTACAAAATTATTACTAAGACTCTGGCTAATAGACTAAAAAAGGTTCTGGACAAGATTATTTCCCCTAATCAATCAGCTTTTGTCCCTGGTAGGTTGATCACAGACAATGCTATTCTGGGGTTTGAATGTATCCATGCGGTCAAGAGCAAAAGAAGGGGAAAGGTAGGAACTGTGAGCTTAAAACTTGATATGAGCAAGGCTTACGATAGAGTTGAGTGGATCTATATTAGAAAGATTATGGAAAAAATGGGATTTAGCTACCAGTGGATAGATCTGATCATGGGATGTGTGGAGTCGGTGAGTTTCCAGGTTTTACTGAACGGAACACCACGACCTAGTTTTAAGCCAACTTGGGGGCTTCGCCAAGGAGATCCTTTATCTCCAGACCTTTTTCTCATATGTGCAGAGGGACTTTCGAGTCTGTTAAACTGTGCAGAAAGGGATAAGAAATTTACAGGTTTGAGTATTACCAAACATTGCCCTTCTATTTCTCATTTGTTTTATGCTGATGATAGTCTTTTGTTTTTTAAAGCTACTAACAAAGATTGCAGATCAATTCAAAGGATCCTAGATACTTATGAAAAGGCATCAGGACAAACGATGAACTATGAGAAATTTATGTTCATGGTGAGCCCAAATACAAGTGAGGAGATGATTCAATATGTCAAGAATAACCTAAGGGTGAATCATACCGGAATGTTGGGTCAATACTTAGGCCTCCCAAACCAAAATGCTCGAAACAAAAAAGAAATTTTTAATCATATCAAAGACAGGGTGTGGAAGACGCTTCAAGGGTGGAAAGGGAAATTCTTTTCGGCAGCTGGAAGGGAAGTTCTAATCAAATCAGGGGCACAAGCCATTCCTAACTATGCTATGAGTTGTTTTAAGTTTCCACTAAGTCTTTGTAATGATCTTAATTCTTTTTGTGCTAGGTTTTGGTGGGGCTGCTCAGAGGAGGGGAAAAAAATCCATTGGAACAGTTAGAGGAAACTTTGCATCAACAAGGACCATGGAGGATTGGGTTTTCGGGATCTCACCGTTTTTAACCAAGCCATGCTTGCGAAGCAAAGCTGGAGATTGATAAAATATCCCAATAGCCTTTTGGCTAAGGTGTTTAAAGGAAGATACTATAAAACAGGGAATTTCTTAAAGGCATATTTGGGAAATAACCCGTCCTACGTATGTAGGAGCATTCTTTGGGGCCGAGAGTTATTTAAGAAGGGGTTTAGATGGAGGGTTGGCAATGGGGTTAGCATTGATGCTTCCTCAGATCCATGGATCCCAAGGGAGGGATCGTGTAAGCCAATTGCCCCCCATCCATATACTCAGAATCTTACGGTGGCCAACCTAATAAATAGGAATGGAACCTGGAATGAGCAGTTGGTCAGTGCACTATTCATTAATCAGGATGCTAACCTCATCATCAATATTCCCCTGAATCCTCAACAAAGGGAGGATGTTATCATTTGGCAATATGATCTCAAAGGGCTTTTTTCTGTTAAAAGTGCATATAGGTTGGGTATGCATTCTCAGGGTCAAACAACAGCTTCGGTGTCTAACTCCAGCCAACAAGTCTCTCTACCAAACAAAATTAAGATTTGTGGATGGAAAATTTACAAAGACATCCTTCCTACAAAAGACAATTTGTATAAGCGTGGAATAGATCTTAATACGGTTTGTTCTTTGTGCAGGGATAGGAGGGAGACAACTTCTCATCTCTTTTGGGAATGCAAAACAACCAAAGGTCTTTGGCCGAAATACTTCCATCCTACTGACTTAGTATGTTTGAATGACAGGAAAAACTGGGCGGCTAAGGACTACTTGGAAAACGTTTGGAAGAAATCAGAATCGGAAGAATCAGAGACTAATAAGATGAGCAAGAGTCTAATTCTCTGTTGGCAGATATGGGATTATAGAAACAAACTAATCCATAACAAGACTCGATCAGATCCGACAATGCTTCAATCGCATATTGACAAATACATGGAGGAATTGCAAGGAAGAGGAGAAATATACCAGGACATCTCCCACGAAGCTTCGACTGCTGCGATCGGCCCAACATGGCTCCGGCCTCCAAACGGAATGTGGAAAATTAACTGTGATGCGGCGTGGTCCGAGGATCATCAAAGAGGAGGGATAGGGTGGATTTTTCGTCAATGGAATGGAAACCTTATTTACGCTGGCTGCCGAACCATCTCCAGACCTTGGAAAATACCGTGGCTGGAAGCGATGGCGGTGTGTGAAGGCATCCGATTGCTGCCGACAGACTCTCCTCCCGTTCAGATTGAAAGCGACGCGCTTAAGGTGATCAATCTTCTAATCGGGAAAGACGAAGATGAGACAGAACTAAAACTGTCCACTGAAGAAGTAAAATCCCTAAGGTCAGGTAGGAATATTGAAGGTTTCTATCATGTGAAGAAGAAACACAATCAGATGGCTCACAAGTTGGCACACAAGGCTTGTATGAGTGGGAGTTCTGATAGTTGGACCCACTCTTTTCCTAGTTGGTTACTTGATTTAAATGCTACTGATGTTGGTGGTGTTAATACCATTGGTGGGGGATCCTATCCCACAGGTATTATTCCATTGGTTCCTATTTTTTAA

mRNA sequence

ATGAGAGTCACGGATGCCGAAAGAGCTTGCGTGTTTCATCTACGAGAAGGAACAATTGACGAATCGAAACAAAAACTGGAGAATGTCATCCTGTGCAAAGTCTTTACAAGCAAAACGATCAACCCTGAGATGTTCTGCTCCAAAATGCCAAAGATTTGGAGTCAGGAGCAAACGATGATAGCTTGCGTTGGATTCAACCTGTTTTTATGCAAATTCAAAAACGCGTGTATAAAAGGCAAAATCATCGAATCTGGACTGTGGTTCTTCGACAAAGCTATGCTTCTAATGGAGGACCCAAAAGGAGACAGTTGTGGCGAGGAAACGGAGTTCAGGAACACAACAATGGAAATTGGAAGCCAATTGGAGAAAGTAGAACAAATTGATCTCGAGGATGGAACTGAGCAACATTGGGGCATATCGTTAAGGATAAAGATTCAAGTAGAGGTCAGTTCACCATTAAAATGTGAGGTCACATCCATGGAAGGGGAAGAGGAAGTGGGAGAGATGGTGGATGAGGAAATAAGAGAAAAGGACATAGGTAATTCGGTGACTAAAGTTGGTGGTCGGCCGGTAGCACCCGAACACATGCTGGAATCTTCACGGAAAGTAGAGAAGAACCAAACGCCGGCAAGGAAGGTAACAGATTGTTTGTCCGAAAAGGAAAAGGCGAAAAATCCGAAGCAAGGCAATAAATTGGACGAGAATAATGGGATAGAGATTTCGTCGGGTTCAAAAGATCATACTGAAGGGGATAAAAGCCCCTACGCAGCGGAAGCGCATCGATTGGACCTTACGCCTTGCCTCAAATTACTTTATGAGCTACCAGTGGGACCTAATGGACCTGCAGATCAGAAGCTCCAACGATGGCATATTGACGCGGTGGTTAAAGAGAAGGATTGGCATTGGAGGTTCTCTGGCATCTATGGCAACCCCAATAGAGATATGCATCATACTACTTGGACTTTGATGAATCGACTAAAAGAGGGATGTAGTCTCCCTTGGATTGTAGGAGGAGATTTTAACGAGATCACTAATCAGAATGAGAAAAAAGGAGGTATGACGAAAGCAGAGTTGGATATGCAAGAGTTCCGTGATATTATAGACGAATGTGCGCTTCACGATCCTGGATATATTGGCCCTGAATTCACATGGTGTAATAACCATGTCAATGGCCAGATGATTTGGGAGCGGTTGGATCGGCTCCTTCTTACTCATGATATGCAAGAGAAGTGTAGCTTATTTAAAGTCTTTCACTTATCATGGATTGCGTCGGATCATAGGCCAATTTTGGCTGAATGGTTTGAAGATAAAAGGGTTAAGAGGAAATGGGAGATAAAAAGGCCTAGACGGTTTGAGGAGATGTGGGTTAAATATGAGGAGTGCAAGGACATAGTTCGTAGGGTTTGGCAGGAGAGTGGAGACAGGATGCCTGGTAACATTATGAATAAAACTAGGGATTGTCTCGAGAGATTAGGGAACTGGAGCAGGGATAGGAGGGAGACAACTTCTCATCTCTTTTGGGAATGCAAAACAACCAAAGGTCTTTGGCCGAAATACTTCCATCCTACTGACTTAGTATGTTTGAATGACAGGAAAAACTGGGCGGCTAAGGACTACTTGGAAAACGTTTGGAAGAAATCAGAATCGGAAGAATCAGAGACTAATAAGATGAGCAAGAGTCTAATTCTCTGTTGGCAGATATGGGATTATAGAAACAAACTAATCCATAACAAGACTCGATCAGATCCGACAATGCTTCAATCGCATATTGACAAATACATGGAGGAATTGCAAGGAAGAGGAGAAATATACCAGGACATCTCCCACGAAGCTTCGACTGCTGCGATCGGCCCAACATGGCTCCGGCCTCCAAACGGAATGTGGAAAATTAACTGTGATGCGGCGTGGTCCGAGGATCATCAAAGAGGAGGGATAGGGTGGATTTTTCGTCAATGGAATGGAAACCTTATTTACGCTGGCTGCCGAACCATCTCCAGACCTTGGAAAATACCGTGGCTGGAAGCGATGGCGGTGTGTGAAGGCATCCGATTGCTGCCGACAGACTCTCCTCCCGTTCAGATTGAAAGCGACGCGCTTAAGGTGATCAATCTTCTAATCGGGAAAGACGAAGATGAGACAGAACTAAAACTGTCCACTGAAGAAGTAAAATCCCTAAGGTCAGGTAGGAATATTGAAGGTTTCTATCATGTGAAGAAGAAACACAATCAGATGGCTCACAAGTTGGCACACAAGGCTTGTATGAGTGGGAGTTCTGATAGTTGGACCCACTCTTTTCCTAGTTGGTTACTTGATTTAAATGCTACTGATGTTGGTGGTGTTAATACCATTGGTGGGGGATCCTATCCCACAGGTATTATTCCATTGGTTCCTATTTTTTAA

Coding sequence (CDS)

ATGAGAGTCACGGATGCCGAAAGAGCTTGCGTGTTTCATCTACGAGAAGGAACAATTGACGAATCGAAACAAAAACTGGAGAATGTCATCCTGTGCAAAGTCTTTACAAGCAAAACGATCAACCCTGAGATGTTCTGCTCCAAAATGCCAAAGATTTGGAGTCAGGAGCAAACGATGATAGCTTGCGTTGGATTCAACCTGTTTTTATGCAAATTCAAAAACGCGTGTATAAAAGGCAAAATCATCGAATCTGGACTGTGGTTCTTCGACAAAGCTATGCTTCTAATGGAGGACCCAAAAGGAGACAGTTGTGGCGAGGAAACGGAGTTCAGGAACACAACAATGGAAATTGGAAGCCAATTGGAGAAAGTAGAACAAATTGATCTCGAGGATGGAACTGAGCAACATTGGGGCATATCGTTAAGGATAAAGATTCAAGTAGAGGTCAGTTCACCATTAAAATGTGAGGTCACATCCATGGAAGGGGAAGAGGAAGTGGGAGAGATGGTGGATGAGGAAATAAGAGAAAAGGACATAGGTAATTCGGTGACTAAAGTTGGTGGTCGGCCGGTAGCACCCGAACACATGCTGGAATCTTCACGGAAAGTAGAGAAGAACCAAACGCCGGCAAGGAAGGTAACAGATTGTTTGTCCGAAAAGGAAAAGGCGAAAAATCCGAAGCAAGGCAATAAATTGGACGAGAATAATGGGATAGAGATTTCGTCGGGTTCAAAAGATCATACTGAAGGGGATAAAAGCCCCTACGCAGCGGAAGCGCATCGATTGGACCTTACGCCTTGCCTCAAATTACTTTATGAGCTACCAGTGGGACCTAATGGACCTGCAGATCAGAAGCTCCAACGATGGCATATTGACGCGGTGGTTAAAGAGAAGGATTGGCATTGGAGGTTCTCTGGCATCTATGGCAACCCCAATAGAGATATGCATCATACTACTTGGACTTTGATGAATCGACTAAAAGAGGGATGTAGTCTCCCTTGGATTGTAGGAGGAGATTTTAACGAGATCACTAATCAGAATGAGAAAAAAGGAGGTATGACGAAAGCAGAGTTGGATATGCAAGAGTTCCGTGATATTATAGACGAATGTGCGCTTCACGATCCTGGATATATTGGCCCTGAATTCACATGGTGTAATAACCATGTCAATGGCCAGATGATTTGGGAGCGGTTGGATCGGCTCCTTCTTACTCATGATATGCAAGAGAAGTGTAGCTTATTTAAAGTCTTTCACTTATCATGGATTGCGTCGGATCATAGGCCAATTTTGGCTGAATGGTTTGAAGATAAAAGGGTTAAGAGGAAATGGGAGATAAAAAGGCCTAGACGGTTTGAGGAGATGTGGGTTAAATATGAGGAGTGCAAGGACATAGTTCGTAGGGTTTGGCAGGAGAGTGGAGACAGGATGCCTGGTAACATTATGAATAAAACTAGGGATTGTCTCGAGAGATTAGGGAACTGGAGCAGGGATAGGAGGGAGACAACTTCTCATCTCTTTTGGGAATGCAAAACAACCAAAGGTCTTTGGCCGAAATACTTCCATCCTACTGACTTAGTATGTTTGAATGACAGGAAAAACTGGGCGGCTAAGGACTACTTGGAAAACGTTTGGAAGAAATCAGAATCGGAAGAATCAGAGACTAATAAGATGAGCAAGAGTCTAATTCTCTGTTGGCAGATATGGGATTATAGAAACAAACTAATCCATAACAAGACTCGATCAGATCCGACAATGCTTCAATCGCATATTGACAAATACATGGAGGAATTGCAAGGAAGAGGAGAAATATACCAGGACATCTCCCACGAAGCTTCGACTGCTGCGATCGGCCCAACATGGCTCCGGCCTCCAAACGGAATGTGGAAAATTAACTGTGATGCGGCGTGGTCCGAGGATCATCAAAGAGGAGGGATAGGGTGGATTTTTCGTCAATGGAATGGAAACCTTATTTACGCTGGCTGCCGAACCATCTCCAGACCTTGGAAAATACCGTGGCTGGAAGCGATGGCGGTGTGTGAAGGCATCCGATTGCTGCCGACAGACTCTCCTCCCGTTCAGATTGAAAGCGACGCGCTTAAGGTGATCAATCTTCTAATCGGGAAAGACGAAGATGAGACAGAACTAAAACTGTCCACTGAAGAAGTAAAATCCCTAAGGTCAGGTAGGAATATTGAAGGTTTCTATCATGTGAAGAAGAAACACAATCAGATGGCTCACAAGTTGGCACACAAGGCTTGTATGAGTGGGAGTTCTGATAGTTGGACCCACTCTTTTCCTAGTTGGTTACTTGATTTAAATGCTACTGATGTTGGTGGTGTTAATACCATTGGTGGGGGATCCTATCCCACAGGTATTATTCCATTGGTTCCTATTTTTTAA

Protein sequence

MRVTDAERACVFHLREGTIDESKQKLENVILCKVFTSKTINPEMFCSKMPKIWSQEQTMIACVGFNLFLCKFKNACIKGKIIESGLWFFDKAMLLMEDPKGDSCGEETEFRNTTMEIGSQLEKVEQIDLEDGTEQHWGISLRIKIQVEVSSPLKCEVTSMEGEEEVGEMVDEEIREKDIGNSVTKVGGRPVAPEHMLESSRKVEKNQTPARKVTDCLSEKEKAKNPKQGNKLDENNGIEISSGSKDHTEGDKSPYAAEAHRLDLTPCLKLLYELPVGPNGPADQKLQRWHIDAVVKEKDWHWRFSGIYGNPNRDMHHTTWTLMNRLKEGCSLPWIVGGDFNEITNQNEKKGGMTKAELDMQEFRDIIDECALHDPGYIGPEFTWCNNHVNGQMIWERLDRLLLTHDMQEKCSLFKVFHLSWIASDHRPILAEWFEDKRVKRKWEIKRPRRFEEMWVKYEECKDIVRRVWQESGDRMPGNIMNKTRDCLERLGNWSRDRRETTSHLFWECKTTKGLWPKYFHPTDLVCLNDRKNWAAKDYLENVWKKSESEESETNKMSKSLILCWQIWDYRNKLIHNKTRSDPTMLQSHIDKYMEELQGRGEIYQDISHEASTAAIGPTWLRPPNGMWKINCDAAWSEDHQRGGIGWIFRQWNGNLIYAGCRTISRPWKIPWLEAMAVCEGIRLLPTDSPPVQIESDALKVINLLIGKDEDETELKLSTEEVKSLRSGRNIEGFYHVKKKHNQMAHKLAHKACMSGSSDSWTHSFPSWLLDLNATDVGGVNTIGGGSYPTGIIPLVPIF
Homology
BLAST of Spg029357 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia])

HSP 1 Score: 194.1 bits (492), Expect = 4.5e-45
Identity = 95/207 (45.89%), Postives = 127/207 (61.35%), Query Frame = 0

Query: 294 VVKEKDWHWRFSGIYGNPNRDMHHTTWTLMNRLKEGCSLPWIVGGDFNEITNQNEKKGGM 353
           +VKE  ++WRF+GIYG+  +D    TW L+ RL     LPWI+GGDFNEI   +EK  G+
Sbjct: 1   MVKEDRYNWRFTGIYGHLVQDNRWETWELIGRLHSIFDLPWILGGDFNEILFNSEKLEGV 60

Query: 354 TKAELDMQEFRDIIDECALHDPGYIGPEFTWCNNHVNGQMIWERLDRLLLTHDMQEKCSL 413
            + +  MQ F+D +D C L DPG++G  FTWC+ H   Q IWERLDR L+   + +    
Sbjct: 61  PRRQSLMQNFKDTLDLCGLLDPGFVGDIFTWCDGHKYRQPIWERLDRFLINTAIFQIQET 120

Query: 414 FKVFHLSWIASDHRPILAEWF--EDKRVKRKWEIKRPRRFEEMWVKYEECKDIVRRVWQE 473
            ++ HL ++ASDHRPILAEW    +  V R+ + +RP RFEE W  ++ECK+IVRRVW  
Sbjct: 121 LEIRHLEFLASDHRPILAEWLGVGEATVGRR-KGRRPHRFEEQWFSFQECKEIVRRVWAV 180

Query: 474 SGDRMPGNIMNKTRDCLERLGNWSRDR 499
            GD        K   CLE L  W+  R
Sbjct: 181 QGDLCGTVFQGKINSCLEELIKWNVGR 206

BLAST of Spg029357 vs. NCBI nr
Match: XP_023871634.1 (uncharacterized protein LOC111984238 [Quercus suber])

HSP 1 Score: 177.6 bits (449), Expect = 4.4e-40
Identity = 84/205 (40.98%), Postives = 112/205 (54.63%), Query Frame = 0

Query: 290 HIDAVV-KEKDWHWRFSGIYGNPNRDMHHTTWTLMNRLKEGCSLPWIVGGDFNEITNQNE 349
           HIDA++ K K+  WRF+G YG      HH +W  + RLK   +LPWI  GDFNEI   +E
Sbjct: 87  HIDAIINKGKEGEWRFTGFYGESETSNHHISWATLRRLKAKFTLPWICAGDFNEIIRAHE 146

Query: 350 KKGGMTKAELDMQEFRDIIDECALHDPGYIGPEFTWCNNHVNGQMIWERLDRLLLTHDMQ 409
           K GG  +    M+EFRD++DEC   D GY G +FTWCN H  G  +WER+DR + T D  
Sbjct: 147 KLGGRHRPSRQMEEFRDVLDECGFQDLGYNGNKFTWCNGHAEGHTVWERIDRAVGTSDWL 206

Query: 410 EKCSLFKVFHLSWIASDHRPILAEWFE-DKRVKRKWEIKRPRRFEEMWVKYEECKDIVRR 469
                 KV HL    SDH+PIL       KRV + W      RFE+MW++ E C++++  
Sbjct: 207 SMFPATKVVHLECGTSDHKPILIHLLGIPKRVNKPW------RFEQMWMRDEGCREVIED 266

Query: 470 VWQESGDRMP-GNIMNKTRDCLERL 492
            W  +    P   +  K   C + L
Sbjct: 267 AWSHAYHGSPMSRVEGKVERCRKNL 285

BLAST of Spg029357 vs. NCBI nr
Match: XP_030927178.1 (uncharacterized protein LOC115953579 [Quercus lobata])

HSP 1 Score: 176.8 bits (447), Expect = 7.5e-40
Identity = 90/210 (42.86%), Postives = 122/210 (58.10%), Query Frame = 0

Query: 290 HIDAVVKEK-DWHWRFSGIYGNPNRDMHHTTWTLMNRLKEGCSLPWIVGGDFNEITNQNE 349
           HID  +K+  +  WRF+G YG P+    H  W  +  LK   S PW+  GDFNEIT Q+E
Sbjct: 87  HIDTTIKKNTEEEWRFTGFYGEPDTRDRHEAWLKLRSLKNRGSAPWLCAGDFNEITKQSE 146

Query: 350 KKGGMTKAELDMQEFRDIIDECALHDPGYIGPEFTWCNNHVNGQMIWERLDRLLLTHDMQ 409
           K+GG  +    MQ FRD++DEC   D GYIGP+FTW + H  G  +WERLDR + T+D  
Sbjct: 147 KRGGRIRPHSQMQPFRDVLDECGFMDTGYIGPQFTW-HKHYAGYTVWERLDRAVATNDWF 206

Query: 410 EKCSLFKVFHLSWIASDHRPILAEWFEDKRVKRKWEIKRPRRFEEMWVKYEECKDIVRRV 469
           EK    KV+HL    SDH+P+   W   + +   ++ +RP RFE+MW+    C D +  V
Sbjct: 207 EKFPDTKVYHLDVTTSDHKPL---WVVPE-IMESYQ-QRPFRFEQMWMTESGCSDTIEAV 266

Query: 470 WQESGDRMPGNI--MNKTRDCLERLGNWSR 497
           W+ SGD  P +I  +NK   C   L  WS+
Sbjct: 267 WR-SGDFDPRSIKLLNKVDRCGIALTKWSK 289

BLAST of Spg029357 vs. NCBI nr
Match: XP_030970475.1 (uncharacterized protein LOC115990845 [Quercus lobata])

HSP 1 Score: 176.4 bits (446), Expect = 9.8e-40
Identity = 100/254 (39.37%), Postives = 135/254 (53.15%), Query Frame = 0

Query: 290 HIDAVV-KEKDWHWRFSGIYGNPNRDMHHTTWTLMNRLKEGCSLPWIVGGDFNEITNQNE 349
           HID +V K KD  WRF G YG PN    H  W  +  LK   S PWI  GDFNEIT Q+E
Sbjct: 20  HIDTIVNKNKDDEWRFRGFYGGPNTQNRHEAWARLKSLKARGSAPWICAGDFNEITKQSE 79

Query: 350 KKGGMTKAELDMQEFRDIIDECALHDPGYIGPEFTWCNNHVNGQMIWERLDRLLLTHDMQ 409
           K+GG  +    MQ FR+++DEC   D G++G EFTW + H     +WERLDR + T D  
Sbjct: 80  KRGGRIRPHGQMQAFREVLDECGFFDLGFVGSEFTW-HKHFADYTVWERLDRAVATSDWL 139

Query: 410 EKCSLFKVFHLSWIASDHRPILAEWFEDKRVKRKWEIKRPRRFEEMWVKYEECKDIVRRV 469
                 K++HL   ASDHRPIL               +RP RFE+MW+  + C + V+ V
Sbjct: 140 ALFPDTKIYHLEADASDHRPILI-----VPDGMNCSQQRPFRFEQMWLTEQGCSNTVQAV 199

Query: 470 WQ-ESGDRMPGNIMNKTRDCLERLGNWSRDRRETTSHLFWECKTTKGLWPKYFHPTDLVC 529
           WQ ++G+     ++ K  +C + L  WSR+      ++  E + T+ L  K     +LV 
Sbjct: 200 WQRDNGENEVLKVIRKVDECGKELTKWSRN---CFKNVRKELEKTRKLLAK----AELVA 259

Query: 530 LNDRKNWAAKDYLE 542
           +N   N   K YLE
Sbjct: 260 MNGGSNKRMK-YLE 259

BLAST of Spg029357 vs. NCBI nr
Match: KAF5443558.1 (hypothetical protein F2P56_036105, partial [Juglans regia])

HSP 1 Score: 176.0 bits (445), Expect = 1.3e-39
Identity = 86/219 (39.27%), Postives = 130/219 (59.36%), Query Frame = 0

Query: 284 QKLQRWHIDAVVKEKDW-HWRFSGIYGNPNRDMHHTTWTLMNRLKEGCSLPWIVGGDFNE 343
           Q     HIDA++++ D   WRF+G+YGNP     + TW L+ RL  G   PW+VGGDFNE
Sbjct: 81  QSFSLHHIDALIQDGDGPEWRFTGVYGNPEVVNRYLTWNLLRRLNSGVDGPWLVGGDFNE 140

Query: 344 ITNQNEKKGGMTKAELDMQEFRDIIDECALHDPGYIGPEFTWCNNHVNGQMIWERLDRLL 403
           + + NEK+GG  ++E  M+ FR++I +C+L D G+ GP++TWCN     + I ERLDR L
Sbjct: 141 LLHFNEKRGGRPRSENQMEAFRNVIFDCSLRDLGFRGPKYTWCNGRAGSRAISERLDRFL 200

Query: 404 LTHDMQEKCSLFKVF---HLSWIASDHRPILAEWFEDKRVKRKWEIKRPRRFEEMWVKYE 463
             +     C+LF  F   H     SDH P+   WF+ + ++++ +  +  RFE MWV  E
Sbjct: 201 GNNQF---CALFPQFVVRHGMAAYSDHLPV---WFDSEELEKRNKAPKLFRFEAMWVGVE 260

Query: 464 ECKDIVRRVWQESGD--RMPGNIMNKTRDCLERLGNWSR 497
           +C  I+ RVW   G+  RM  +++   + C E+L  W++
Sbjct: 261 QCSQIINRVWHTDGNGGRME-DVLRSMKKCGEQLSEWNK 292

BLAST of Spg029357 vs. ExPASy TrEMBL
Match: A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.2e-45
Identity = 95/207 (45.89%), Postives = 127/207 (61.35%), Query Frame = 0

Query: 294 VVKEKDWHWRFSGIYGNPNRDMHHTTWTLMNRLKEGCSLPWIVGGDFNEITNQNEKKGGM 353
           +VKE  ++WRF+GIYG+  +D    TW L+ RL     LPWI+GGDFNEI   +EK  G+
Sbjct: 1   MVKEDRYNWRFTGIYGHLVQDNRWETWELIGRLHSIFDLPWILGGDFNEILFNSEKLEGV 60

Query: 354 TKAELDMQEFRDIIDECALHDPGYIGPEFTWCNNHVNGQMIWERLDRLLLTHDMQEKCSL 413
            + +  MQ F+D +D C L DPG++G  FTWC+ H   Q IWERLDR L+   + +    
Sbjct: 61  PRRQSLMQNFKDTLDLCGLLDPGFVGDIFTWCDGHKYRQPIWERLDRFLINTAIFQIQET 120

Query: 414 FKVFHLSWIASDHRPILAEWF--EDKRVKRKWEIKRPRRFEEMWVKYEECKDIVRRVWQE 473
            ++ HL ++ASDHRPILAEW    +  V R+ + +RP RFEE W  ++ECK+IVRRVW  
Sbjct: 121 LEIRHLEFLASDHRPILAEWLGVGEATVGRR-KGRRPHRFEEQWFSFQECKEIVRRVWAV 180

Query: 474 SGDRMPGNIMNKTRDCLERLGNWSRDR 499
            GD        K   CLE L  W+  R
Sbjct: 181 QGDLCGTVFQGKINSCLEELIKWNVGR 206

BLAST of Spg029357 vs. ExPASy TrEMBL
Match: A0A7N2LUL7 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.3e-39
Identity = 84/210 (40.00%), Postives = 113/210 (53.81%), Query Frame = 0

Query: 290 HIDAVV-KEKDWHWRFSGIYGNPNRDMHHTTWTLMNRLKEGCSLPWIVGGDFNEITNQNE 349
           HIDA++ K K+  WRF+G YG      H+ +W  + RLK   +LPWI  GDFNEI   +E
Sbjct: 449 HIDAIINKGKEGEWRFTGFYGESETSNHYISWATLRRLKAKFTLPWICAGDFNEIIRAHE 508

Query: 350 KKGGMTKAELDMQEFRDIIDECALHDPGYIGPEFTWCNNHVNGQMIWERLDRLLLTHDMQ 409
           K GG  +    M+EFRD++DEC   D GY G +FTWCN H  G  +WERLDR + T D  
Sbjct: 509 KLGGRHRPSRQMEEFRDVLDECDFQDLGYSGNKFTWCNGHGEGHTVWERLDRAVGTTDWL 568

Query: 410 EKCSLFKVFHLSWIASDHRPILAEWFE-DKRVKRKWEIKRPRRFEEMWVKYEECKDIVRR 469
                 KV HL    SDH+PI+       K+V + W      RFE+MW++ E C +++  
Sbjct: 569 SMFLATKVVHLECGTSDHKPIMIHLLGIPKKVNKPW------RFEQMWMRDEGCSEVIED 628

Query: 470 VWQESGDRMP-GNIMNKTRDCLERLGNWSR 497
            W       P   +  K   C + L  WS+
Sbjct: 629 AWSHDYHGNPMSRVEGKVERCRKSLKWWSK 652

BLAST of Spg029357 vs. ExPASy TrEMBL
Match: A0A2N9IXK4 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57484 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.6e-38
Identity = 85/211 (40.28%), Postives = 117/211 (55.45%), Query Frame = 0

Query: 290 HIDAVVKEKDWH-WRFSGIYGNPNRDMHHTTWTLMNRLKEGCSLPWIVGGDFNEITNQNE 349
           HIDA++ E + + WRF+G YG P     H +W+L+  L    SLPW   GDFNE+ +  E
Sbjct: 404 HIDAIIDEGEPNSWRFTGFYGAPETHRRHESWSLLRLLHSQSSLPWCCMGDFNELLSYEE 463

Query: 350 KKGGMTKAELDMQEFRDIIDECALHDPGYIGPEFTWCNNHVNGQMIWERLDRLLLTHDMQ 409
           K+GG  ++   MQ+FRD ID C   D G+ GP FTWCNN +    +WERLDR+L T    
Sbjct: 464 KQGGPIRSHRQMQDFRDAIDHCGFEDLGFNGPPFTWCNNRLGSHTVWERLDRVLATTSWI 523

Query: 410 EKCSLFKVFHLSWIASDHRPILAEWFEDKRVKRKWEIKRPRRFEEMWVKYEECKDIVRRV 469
               L +V HL  ++SDH PI  ++      + +    R  RFEEMW+ +  CK+ +   
Sbjct: 524 SLFPLAQVQHLHAVSSDHNPISNQFSPSPSSRPR--SNRIFRFEEMWLSHPGCKETITSA 583

Query: 470 W--QESGDRMPGNIMNKTRDCLERLGNWSRD 498
           W  Q+ G  M   + +K R C   L  WSRD
Sbjct: 584 WQTQKHGTAM-FQVHDKLRTCRNSLRQWSRD 611

BLAST of Spg029357 vs. ExPASy TrEMBL
Match: A0A2N9IIR5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51703 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.6e-38
Identity = 80/209 (38.28%), Postives = 114/209 (54.55%), Query Frame = 0

Query: 290 HIDAVVKEKDWH-WRFSGIYGNPNRDMHHTTWTLMNRLKEGCSLPWIVGGDFNEITNQNE 349
           HID+++ E     WRF+G YG P     H +W ++  L    SLPW   GDFNE+ + +E
Sbjct: 502 HIDSIINEGTADAWRFTGFYGAPETHNRHHSWDMLRTLSRQFSLPWCCAGDFNELVSLSE 561

Query: 350 KKGGMTKAELDMQEFRDIIDECALHDPGYIGPEFTWCNNHVNGQMIWERLDRLLLTHDMQ 409
           K+GG  + +  MQ FRD++DEC   D G+ GPEFTWCNN +NG  +WERLDR+++  +  
Sbjct: 562 KRGGRPRPDAQMQAFRDVLDECGFQDLGFHGPEFTWCNNRINGATVWERLDRMVVNSEWL 621

Query: 410 EKCSLFKVFHLSWIASDHRPILAEWFEDKRVKRKWEIKRPRRFEEMWVKYEECKDIVRRV 469
            +     V+H+    SDH P+   W     V      K+  RFE MW+  E C++ V   
Sbjct: 622 LRFQEATVYHIQGTLSDHMPL---WLSPSSVSIT-PRKKLFRFESMWLTDEGCRNTVEAA 681

Query: 470 WQESGD-RMPGNIMNKTRDCLERLGNWSR 497
           W+ + D      + N+   C  RL  WSR
Sbjct: 682 WRSNSDGPQMLQVWNRVNLCRRRLSYWSR 706

BLAST of Spg029357 vs. ExPASy TrEMBL
Match: A0A5C7HUN0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_012174 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 9.9e-38
Identity = 144/502 (28.69%), Postives = 223/502 (44.42%), Query Frame = 0

Query: 1   MRVTDAERACVFHLREGTIDESKQKLENVILCKVFTSKTINPEMFCSKMPKIWSQ-EQTM 60
           + + DA+ A +  + E       + L++ ++ KV + K +N E F S + ++WS   Q  
Sbjct: 13  LSIEDADGA-IHEILEVFQQAGVEDLDHCLVGKVLSGKKVNREAFKSVIEQLWSPFGQVE 72

Query: 61  IACVGFNLFLCKFKNACIKGKIIESGLWFFDKAMLLMEDPKGDSCGEETEF--------- 120
           I   G N F+  F       ++ + G W+FDK +L +E P+G     +  F         
Sbjct: 73  IEKGGENTFMFYFNKLDDWIQVWQRGPWYFDKCLLALEKPEGIGEIAKLRFNMAKFWVQI 132

Query: 121 ---------RNTTMEIGSQLEKVEQIDLEDGTEQHWGISLRIKIQVEVSSPLK------- 180
                    R T   +  Q+ KV  I++   +++  G  LR+KIQV++S P K       
Sbjct: 133 HDISIMCKNRRTARWLAEQIGKV--IEIPTDSKECCGKFLRVKIQVDISKPQKRYNIVVV 192

Query: 181 ----------CEVTSMEGEEEVGEMVDEEIREKDIGNSVTKVGGRPVAPEHMLE------ 240
                     C      G   + E  DE   ++    + TK G    AP  MLE      
Sbjct: 193 GLKYERLSKFCNACGRVG-HRINECQDEVAEKEATEGTSTKFGSWLRAP--MLEKLKSKS 252

Query: 241 -----------SSRKVEKNQTPARKVTDCLSEKEKAKNPKQGNKLDENNGIEISSGSKDH 300
                      +S+K E +   A  V   +   ++   P + +     + I +   S   
Sbjct: 253 YSQVLSGSTDRTSQKGESSSAAAAAVKKAVKGSQETLQPGEVDGPGLPDRISVDGPSNGP 312

Query: 301 TEGDKSPYAAEAHRLDLT-PCLKLLYELPVGPN-GPADQK--LQRW-------------- 360
           +E   S   A+ ++  ++ P  + L E P   N   AD+K  L  W              
Sbjct: 313 SE--LSATGAQVNKEMISGPSYEWLGESPHVRNLEEADKKGFLLLWKDSLDVSILSFSSG 372

Query: 361 HIDAVVKEKD-WHWRFSGIYGNPNRDMHHTTWTLMNRLKEGCSLPWIVGGDFNEITNQNE 420
           HIDA ++ +D + WRFSG YG+PN      +WTL+ RL+E   LPW+  GDFNE+ +QNE
Sbjct: 373 HIDARIQSEDGYPWRFSGFYGDPNPKKRVNSWTLLRRLREVDRLPWVYSGDFNEVLSQNE 432

Query: 421 KKGGMTKAELDMQEFRDIIDECALHDPGYIGPEFTWCNNHVNGQMIWERLDRLLLTHDMQ 431
             GG  K  L+M  FR  +++C L D GY GP + W N       I ERLDR+L  +  +
Sbjct: 433 NCGGSEKVFLNMLLFRQAVEDCDLIDLGYSGPRYMWNNMRKGRSNIQERLDRVLADNQWR 492

BLAST of Spg029357 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 6.8e-15
Identity = 71/280 (25.36%), Postives = 121/280 (43.21%), Query Frame = 0

Query: 497 DRRETTSHLFWECKTTKGLWPKYFHPTDLVCLNDRKNWAAKDYLENVWKKSESEESETNK 556
           D RET +HL ++C   + +W         +       W    Y    W    + E E  K
Sbjct: 17  DSRETVNHLLFKCCFARLVW-----AISPIPAYPEGEWTDSLYANLYWVL--NLEVEIPK 76

Query: 557 MSK--SLI--LCWQIWDYRNKLIHNKTRSD-PTMLQSHIDKYMEELQGRGEIYQDISHEA 616
           + K  +L+  L W++W  RN+L+      D P +L+  ++ + EE   R E+    S   
Sbjct: 77  LGKIGNLVPWLLWRLWKSRNELMFKGKEYDAPEVLRRAMEDF-EEWSTRRELEGKASGPQ 136

Query: 617 STAAIGPTWLRPPNGMWKINCDAAWSEDHQRGGIGWIFRQWNGNLIYAGCRTISRPWKIP 676
               +   W  PP    K N DA W  ++ R GIGWI R  +G +++ G R + R   + 
Sbjct: 137 VERNLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVL 196

Query: 677 WLEAMAVCEGIRLLPT-DSPPVQIESDALKVINLLIGKDEDETELKLSTEEVKSLRSGRN 736
             E  A+   +  +   +   +  ESDA  ++NLL   D+    L+ + E+++ L     
Sbjct: 197 EAELEALRWAVLTMSRFNYKRIIFESDAQALVNLL-NSDDFWPTLQPALEDIQQLLHHFE 256

Query: 737 IEGFYHVKKKHNQMAHKLAHKACMSGSSDSWTHSF-PSWL 770
              F    +  N++A ++A ++    + D    S  P WL
Sbjct: 257 EVKFEFTPRGGNKVADRIARESISFSNYDPKLFSIVPQWL 287

BLAST of Spg029357 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 5.8e-14
Identity = 65/274 (23.72%), Postives = 117/274 (42.70%), Query Frame = 0

Query: 499 RETTSHLFWECKTTKGLWPKYFHPTDLVCLNDRKNWAAKDYLENVWKKSESEESETNKMS 558
           +ET +HL ++C   +  W     P  L        WA   Y+   W  +    +   + +
Sbjct: 302 KETVNHLLFKCTFARLTWAISSIPIPL-----GGEWADSIYVNLYWVFNLGNGNPQWEKA 361

Query: 559 KSLI--LCWQIWDYRNKLIHNKTRSDPTMLQSHIDKYMEELQGRGEIYQDISHEASTAAI 618
             L+  L W++W  RN+L+      +   +    +  +EE + R E     +      + 
Sbjct: 362 SQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSS 421

Query: 619 GPTWLRPPNGMWKINCDAAWSEDHQRGGIGWIFRQWNGNLIYAGCRTISRPWKIPWLEAM 678
              W  PP+   K N DA W+ D++R GIGW+ R   G + + G R + +   +   E  
Sbjct: 422 CGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELE 481

Query: 679 AVCEGIRLLPT-DSPPVQIESDALKVINLLIGKDEDETELKLSTEEVKSLRSGRNIEGFY 738
           A+   +  L       V  ESD+  +I +L   DE    LK + ++++ L S      F 
Sbjct: 482 AMRWAVLSLSRFQYNYVIFESDSQVLIEIL-NNDEIWPSLKPTIQDLQRLLSQFTEVKFV 541

Query: 739 HVKKKHNQMAHKLAHKACMSGSSDSWTHSF-PSW 769
            + ++ N +A ++A ++    + D   +S  PSW
Sbjct: 542 FIPREGNTLAERVARESLSFLNYDPKLYSIVPSW 569

BLAST of Spg029357 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 4.4e-06
Identity = 62/285 (21.75%), Postives = 110/285 (38.60%), Query Frame = 0

Query: 500 ETTSHLFWECKTTKGLWPKYFHPTDLVCLNDRKNWAAKDYLENVWKK--SESEESETNKM 559
           ET  H+ + C  T+ +W       +++  N    W      E+   +    S+   TN +
Sbjct: 83  ETIHHIMFNCPYTQSVW----RSANIIIGN---QWGPPSSFEDNLNRLIQLSKTQTTNSL 142

Query: 560 SKSL--ILCWQIWDYRNK-LIHNKTRSDPTMLQSHIDKYMEELQGRGEIYQDISHEASTA 619
            + L   + W++W  RN  L   K +S     +  I    E L    E  ++ +   +T 
Sbjct: 143 DRFLPFWIMWRLWKSRNVFLFQQKCQSPDYEARKGIQDATEWLNA-NETTENTNVHVATN 202

Query: 620 AI------GPTWLRPPNGMWKINCDAAWSEDHQRGGIGWIFRQWNGNLIYAGCRTISRPW 679
            I         W  PP G  K N D+ +++       GW  R+ NG+++  G   +    
Sbjct: 203 PIQTSRRDSSQWNPPPEGWVKCNFDSGYTQGSPYTRSGWTIRECNGHIVLCGNAKLQSST 262

Query: 680 KIPWLEAMAVCEGIRLLPTDS-PPVQIESDALKVINLLIGKDEDETELKLSTEEVKSLRS 739
                EA+     ++++       V  ESD+  ++  LI   ED + L     +++    
Sbjct: 263 CSLHAEALGFLHALQVIWAHGLRYVWFESDSKSLVT-LINNGEDHSLLGTLIYDIRHWML 322

Query: 740 GRNIEGFYHVKKKHNQMAHKLA-HKACMSGSSDSWTHSFPSWLLD 772
                    V ++ N  A  LA H         S+T + PSWL++
Sbjct: 323 KLPYCSLEFVNRERNSAADALASHVHARDPLFQSYT-TPPSWLVN 357

BLAST of Spg029357 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 1.1e-04
Identity = 49/209 (23.44%), Postives = 78/209 (37.32%), Query Frame = 0

Query: 563 LCWQIWDYRNKLIHNKTRSD-PTMLQSHIDKYMEELQGRGEIYQDISHEASTAAIGPTWL 622
           L W+IW   N L+ N TR+   T ++  ++   E L       Q   +  +  +    W 
Sbjct: 47  LMWRIWKSGNDLVFNHTRTKFQTTVEMALNDTKEWLDNTMTNEQQNGNRNADPSRNTKWS 106

Query: 623 RPPNGMWKINCDAAWSEDHQRGGIGWIFRQWNGNLIYAGCRTISRPWKIPWLEAMAVCEG 682
            P     K N DA+  E +   G+GWI R   G +I  G             E   +   
Sbjct: 107 PPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTLIWA 166

Query: 683 IRLLPTDSPPVQIESDALKVINLLIGKDEDETELKLSTEEVKS-LRSGRNIEGFYHVKKK 742
           I+          I     + I  +I        L+   + ++S + S  +IE F    ++
Sbjct: 167 IQASYGFGHKKVIFEGDNQTITRMINTKSSNPRLQHFLDTIQSWIPSFESIE-FSFKHRE 226

Query: 743 HNQMAHKLAHKACMSGSSDSWTHSFPSWL 770
            N  A  LA +A    +  S  HS P +L
Sbjct: 227 QNGCADFLAKQAIKENTQWSLFHSCPYFL 254

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022155286.14.5e-4545.89uncharacterized protein LOC111022423 [Momordica charantia][more]
XP_023871634.14.4e-4040.98uncharacterized protein LOC111984238 [Quercus suber][more]
XP_030927178.17.5e-4042.86uncharacterized protein LOC115953579 [Quercus lobata][more]
XP_030970475.19.8e-4039.37uncharacterized protein LOC115990845 [Quercus lobata][more]
KAF5443558.11.3e-3939.27hypothetical protein F2P56_036105, partial [Juglans regia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DRA02.2e-4545.89uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A7N2LUL72.3e-3940.00Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A2N9IXK42.6e-3840.28RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS57484 ... [more]
A0A2N9IIR52.6e-3838.28Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51703 PE=4 SV=1[more]
A0A5C7HUN09.9e-3828.69Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_012174 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G34320.16.8e-1525.36Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT4G29090.15.8e-1423.72Ribonuclease H-like superfamily protein [more]
AT2G02650.14.4e-0621.75Ribonuclease H-like superfamily protein [more]
AT5G65005.11.1e-0423.44Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 631..752
e-value: 3.5E-15
score: 55.9
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 274..432
e-value: 4.1E-18
score: 68.0
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 279..432
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 626..753
e-value: 1.9E-12
score: 49.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..253
NoneNo IPR availablePANTHERPTHR33710BNAC02G09200D PROTEINcoord: 264..498
NoneNo IPR availablePANTHERPTHR33710:SF35SUBFAMILY NOT NAMEDcoord: 264..498
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 630..750
e-value: 4.24709E-18
score: 78.8952
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 626..754

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg029357.1Spg029357.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity