Spg029256 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg029256
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RNase H domain-containing protein
Location	scaffold12: 33552499 .. 33555543 (-)
RNA-Seq Expression	Spg029256
Synteny	Spg029256

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTGGAACGAGAGCCTTATTAAAGAAAGCCCAAGAAGTGGAAGAAATTCTTAGCATCCCTTTGGGAAGTAAAGAGATTATGGATGAGATTATATGGGCTGAGCATCCTAAGGGTGTTAGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGAAACAAATTAATCGATCTCAATAAAGCGTTATTTTAGTAATTCAGTAATTTGGTTATTGAATAATCGAGTTTGCATTAATAAACCCTAAATCCAATAAACTAAGATCCAAGGTTGTTTACATGAAACTTGGACTAGTATGTGGGGACATACGGGGATCGGTGTCCAAGTAACAACCTAAAAGGTATATAGTATAGGGATAAGGCTGGGTACCTTATCCTGGTGACACTATGTGATACGACCCACCTTGTATTCGATACAGATGCAATGATCCAAAGCATCCATGTAGGAGACATGCGGGTGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCGCGAAATAGTAACCACTAGATGTAACGTCGTTAACTAGTTTAGGTTTCTATTTCAATAGGATGACCTAGGTAACTCAATCTCAATCCTGAGTTTGTTATGAACCCCTTTCAGGAGGGATTGTCCTTAGATTTGTATGGGTGAGAATGGCCAGTTCGCCGACTCAATAAGCCTACCATTTCAGGGGCAAGACCGAATGGGGGTTGGGAACATAACAGTATAAGATGGAATTCACTCCTTCCCCTATTGGGGTAAGTAGATGTGTGTTCCCTTAAGGGCTGATTCCGGGACTTGAACAAAGGCGCGCCGTCCTCTCCTGGCCCGATAGGAACTCATGTTTAGTGGTTGAACCCTAAACAACTTGTTCATTAGAGGGATCAGCGGTACTTAAGGAACCAGAGGTAAACCAGGGGTAAAACGGTAATTTGACCCAGCTGGTGTTACGTGAAGGATTGACTTACTGCATTGGTCAATATCCGTGGACACAGAAATGTTCTACAGTGAGAAGAGTGCAGCTGTGGGTCTTTAGTGGAGTGACCCACAGTTAACGAATGTTGACTAACTTGGTTAATGAGTTTGGCCAATTAGTCTCGTATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCCACTGGTAGCTCGTAAAGAGACTTAAGGTAATTAAGTATAAATTGTAAATTGAAAGTGTTCAATTTATTTGGGGAATCGTATAATGTATATTGATGCATTATAATATAAAGTTTATGAAACTTTATAATATAATTTTTGAATTAATTTCAAAAAGTAATTCTTGAGAGAAAATATTTGAAAGAGTTCAAATAAATTTAATATGAATTGGATTCAAATTAATTTTAATAAAATCCCTAAGATTAAATATATGATAAAATTGGGTAATTAATTAATTATGGAATTAATTAATTATTTATTAAAATTAGAGACCTTTTCCTATTAGGAAAGAAAATATTTGAAAGAGTTCAAGTAAATTTAATATGAACTGGATTCATATTAATTTTAATTTTAATAAAATCCCTAAGATTAAGTATATGATATTTAATTGAGAAATTAATTAATTAATTATTTATTTATTTATTTATTAAAATTAGAGACTTTTTCCTATTAGGAAAAGGTCTTCCTTTTCCCATTAGGAAAAAGGTCTTGACCTTTACTATATGTAGGACCCCTGGGGTGGGGTGCAAGACATCCCCTTCATTCTCCTATTCTCAGAGAATTCCCCTCAAGGCTTCCTCTAGACTCCCACCAGTCTCCTGCCTCTAGAAGTCTCAGAGTCATACCGGTGTAGCCATAGTGGTGGTGTTCGCACTAGTTCGTGATTAATTCACAAGCAGTTGGTGAATTTAATATGAGTCGTCAACGAGAGTAAGTAATTTGTTACTTTATAAATTAGATTTAGATCTAATATTTATGTATGCTTAACCTTAATATATATTTAGAATAGTTCTAATATTATTGCCAATGTATTGGTATTTTAGATTAAACAAAATTAATTACGAATCGGTCTCAATCATGCTTCCGCTTTACGGAATTACGGAATTCCAATCCTTCAAAGGGGACCTTCACGGTTAAGTCGGCATATCATCTGGCGACTAATCTGGAAAGGATGAAAAAAACGAGCAACTCTAACAACAATGCCAAGACTACTGCGATTTGGAGGAAGTTCTGGAAGCTCAAGATCATCCCTCGTGCTAAACTAAGTGTGTGGAAGATTTTGAACAACCTAATTCCTACTAAAATGAATCTTATCCAAAAGGGCATTGATACTAACCCCTTGTGTGTTCTGTGCAAGTGCAAAGAGGAGTCCAATTCCCACCTGATCTGGGGCTGTAAGTTCACGAAAAAGCTTTGGCTAAGATTCATCCCTAATTTAGTTACTTTTCTTAATGAATGCAGGTCAAATTGGGATGCTCTAACCTTTTGGTAAGGTTTGATGGATAGATTCGAGGAGGAAGAGCTAAGCAGAGCAGCTATTCTGCTATGGAATGTATGGACTTACAGAAACAACATTATATCCAAAGAAGCAATTGCAGAACAACATCAGATCTCCAAAATTATCGAAGCCAGCTTTGAGAAATAATTAAAGGTTAGAGATGCTAACCTGGGATCCCTTAGGCCGAAGAACCAGGAGAGTCATGTTTTCTGGTCTCCTCCGCCCCTATCAGTGCTGAAGCTGAACATTGACGCTTCGTGGAGCAGCTCAAGCAGCAGCGGGGGTCTAGGGTGGTTGGTTCGTGACTCCTCAGGGTCTTTGATCTTGGCTGGTAGAAAGAAAGCTGAGAAGAATTGGAGTATTTTAATGCTAGAAGCTTTAGCGTTGAAAGAAGGGCTTTCAAAATACCTTAATCACAGTGCATGCAAGTCCATTCCTCTCATGGTGGAATCAGACTCGAAGACGCTGATCAATATTCTTCAAGGGCAAGATTCAGTTCTCTCGGAGGTGAGGAACATCGTTGATCTAGCGGAGCGCGAGCAGCAGCGGAGATCTCCTTTAGTTGGTGCCCGCAAGGTTGCAATCGAGCAGTCCATGTGTTAG

mRNA sequence

ATGGAAGCTGGAACGAGAGCCTTATTAAAGAAAGCCCAAGAAGTGGAAGAAATTCTTAGCATCCCTTTGGGAAGTAAAGAGATTATGGATGAGATTATATGGGCTGAGCATCCTAAGGGTGTTAGGTTTTATGCCCTAAAACTCGTAGATAGTCCATTAGGTCCCACTGGACCCCTGGGGTGGGGTGCAAGACATCCCCTTCATTCTCCTATTCTCAGAGAATTCCCCTCAAGGCTTCCTCTAGACTCCCACCAGTCTCCTGCCTCTAGAAGTCTCAGAGTCATACCGGTGGGACCTTCACGGTTAATGCAAAGAGGAGTCCAATTCCCACCTGATCTGGGGCTGTCAAATTGGGATGCTCTAACCTTTTGGCCGAAGAACCAGGAGAGTCATGTTTTCTGGTCTCCTCCGCCCCTATCAGTGCTGAAGCTGAACATTGACGCTTCGTGGAGCAGCTCAAGCAGCAGCGGGGGTCTAGGGTGGTTGGTTCGTGACTCCTCAGGGTCTTTGATCTTGGCTGGTAGAAAGAAAGCTGAGAAGAATTGGAGTATTTTAATGCTAGAAGCTTTAGCGTTGAAAGAAGGGCTTTCAAAATACCTTAATCACAGTGCATGCAAGTCCATTCCTCTCATGGTGGAATCAGACTCGAAGACGCTGATCAATATTCTTCAAGGGCAAGATTCAGTTCTCTCGGAGGTGAGGAACATCGTTGATCTAGCGGAGCGCGAGCAGCAGCGGAGATCTCCTTTAGTTGGTGCCCGCAAGGTTGCAATCGAGCAGTCCATGTGTTAG

Coding sequence (CDS)

ATGGAAGCTGGAACGAGAGCCTTATTAAAGAAAGCCCAAGAAGTGGAAGAAATTCTTAGCATCCCTTTGGGAAGTAAAGAGATTATGGATGAGATTATATGGGCTGAGCATCCTAAGGGTGTTAGGTTTTATGCCCTAAAACTCGTAGATAGTCCATTAGGTCCCACTGGACCCCTGGGGTGGGGTGCAAGACATCCCCTTCATTCTCCTATTCTCAGAGAATTCCCCTCAAGGCTTCCTCTAGACTCCCACCAGTCTCCTGCCTCTAGAAGTCTCAGAGTCATACCGGTGGGACCTTCACGGTTAATGCAAAGAGGAGTCCAATTCCCACCTGATCTGGGGCTGTCAAATTGGGATGCTCTAACCTTTTGGCCGAAGAACCAGGAGAGTCATGTTTTCTGGTCTCCTCCGCCCCTATCAGTGCTGAAGCTGAACATTGACGCTTCGTGGAGCAGCTCAAGCAGCAGCGGGGGTCTAGGGTGGTTGGTTCGTGACTCCTCAGGGTCTTTGATCTTGGCTGGTAGAAAGAAAGCTGAGAAGAATTGGAGTATTTTAATGCTAGAAGCTTTAGCGTTGAAAGAAGGGCTTTCAAAATACCTTAATCACAGTGCATGCAAGTCCATTCCTCTCATGGTGGAATCAGACTCGAAGACGCTGATCAATATTCTTCAAGGGCAAGATTCAGTTCTCTCGGAGGTGAGGAACATCGTTGATCTAGCGGAGCGCGAGCAGCAGCGGAGATCTCCTTTAGTTGGTGCCCGCAAGGTTGCAATCGAGCAGTCCATGTGTTAG

Protein sequence

MEAGTRALLKKAQEVEEILSIPLGSKEIMDEIIWAEHPKGVRFYALKLVDSPLGPTGPLGWGARHPLHSPILREFPSRLPLDSHQSPASRSLRVIPVGPSRLMQRGVQFPPDLGLSNWDALTFWPKNQESHVFWSPPPLSVLKLNIDASWSSSSSSGGLGWLVRDSSGSLILAGRKKAEKNWSILMLEALALKEGLSKYLNHSACKSIPLMVESDSKTLINILQGQDSVLSEVRNIVDLAEREQQRRSPLVGARKVAIEQSMC

Homology

[Close]

BLAST of Spg029256 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 80.1 bits (196), Expect = 3.1e-11
Identity = 46/149 (30.87%), Postives = 79/149 (53.02%), Query Frame = 0


Query: 100 SRLMQRGVQFPPDLGLSNWDALTFWPKNQESHVFWSPPPLSVLKLNIDASWSSSSSSGGL 159
           S ++Q+  +F  +    +  +L+   K   + + W PPP+ +  LN DASWS S+  GG+
Sbjct: 37  STMIQQLTKFVTESSYQSETSLSMLHKTLNNKLKWEPPPMHIWTLNADASWSDSTHRGGI 96

Query: 160 GWLVRDSSGSLILAGRKKAEKNWSILMLEALALKEGLSKYLNHSACKSIPLMVESDSKTL 219
           GW++R   G ++LAG +  E   ++ +LEA A+ EGL    N    +  PL +E+DS  +
Sbjct: 97  GWIIRSWDGDIVLAGNRFVEACNNVKLLEASAILEGLRNLTNLGVLR--PLHIETDSAEV 156

Query: 220 INILQGQDS-------VLSEVRNIVDLAE 242
            ++L  +         V+ E+ N+ D  E
Sbjct: 157 ESLLNRKREDLTKTGWVVEEILNLRDSCE 183

[Close]

BLAST of Spg029256 vs. NCBI nr
Match: CAB4291403.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-09
Identity = 43/113 (38.05%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 125 PKNQESHVFWSPPPLSVLKLNIDASWSSSSSSGGLGWLVRDSSGSLILAGRKKAEKNWSI 184
           P +  + + W  PP  +LK+N DA+WS+    GG+GW++RDS G L+ AG +      S 
Sbjct: 280 PVSSPAPLSWCKPPPGLLKVNSDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSA 339

Query: 185 LMLEALALKEGLSKYLNHSACKSIPLMVESDSKTLINILQGQDSVLSEVRNIV 238
           LM+E LA++  LS+  N        ++VESDS+  I +L G+ +V S++  IV
Sbjct: 340 LMMELLAIRHALSECANFHL---TDIIVESDSQKGILMLNGRATVDSDLEGIV 389

[Close]

BLAST of Spg029256 vs. NCBI nr
Match: CAB4274760.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 73.6 bits (179), Expect = 2.9e-09
Identity = 42/113 (37.17%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 125  PKNQESHVFWSPPPLSVLKLNIDASWSSSSSSGGLGWLVRDSSGSLILAGRKKAEKNWSI 184
            P +  + + W  P L +LK+N DA+WS+    GG+GW++RDS G L+ AG +      S 
Sbjct: 1118 PASSPAPLSWCKPSLGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSA 1177

Query: 185  LMLEALALKEGLSKYLNHSACKSIPLMVESDSKTLINILQGQDSVLSEVRNIV 238
            +M+E LA++  LS+  N        ++VESDS+  I +L G+ +V S++  IV
Sbjct: 1178 IMMELLAIRHALSECANFHL---TDIIVESDSQKGILMLNGRATVDSDLEGIV 1227

[Close]

BLAST of Spg029256 vs. NCBI nr
Match: CAB4274761.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 73.6 bits (179), Expect = 2.9e-09
Identity = 42/113 (37.17%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 125 PKNQESHVFWSPPPLSVLKLNIDASWSSSSSSGGLGWLVRDSSGSLILAGRKKAEKNWSI 184
           P +  + + W  P L +LK+N DA+WS+    GG+GW++RDS G L+ AG +      S 
Sbjct: 250 PASSPAPLSWCKPSLGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSA 309

Query: 185 LMLEALALKEGLSKYLNHSACKSIPLMVESDSKTLINILQGQDSVLSEVRNIV 238
           +M+E LA++  LS+  N        ++VESDS+  I +L G+ +V S++  IV
Sbjct: 310 IMMELLAIRHALSECANFHL---TDIIVESDSQKGILMLNGRATVDSDLEGIV 359

[Close]

BLAST of Spg029256 vs. NCBI nr
Match: CAB4303756.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 73.6 bits (179), Expect = 2.9e-09
Identity = 42/113 (37.17%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 125 PKNQESHVFWSPPPLSVLKLNIDASWSSSSSSGGLGWLVRDSSGSLILAGRKKAEKNWSI 184
           P +  + + W  PP  +LK+N DA+WS+    GG+GW++RDS G L+ AG +      S 
Sbjct: 787 PVSSPAPLSWCKPPPGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSA 846

Query: 185 LMLEALALKEGLSKYLNHSACKSIPLMVESDSKTLINILQGQDSVLSEVRNIV 238
           +M+E LA++  LS+  N        ++VESDS+  I +L G+ +V S++  IV
Sbjct: 847 IMMELLAIRHALSECANFHL---TDIIVESDSQKGILMLNGRATVDSDLEGIV 896

[Close]

BLAST of Spg029256 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.5e-11
Identity = 46/149 (30.87%), Postives = 79/149 (53.02%), Query Frame = 0


Query: 100 SRLMQRGVQFPPDLGLSNWDALTFWPKNQESHVFWSPPPLSVLKLNIDASWSSSSSSGGL 159
           S ++Q+  +F  +    +  +L+   K   + + W PPP+ +  LN DASWS S+  GG+
Sbjct: 37  STMIQQLTKFVTESSYQSETSLSMLHKTLNNKLKWEPPPMHIWTLNADASWSDSTHRGGI 96

Query: 160 GWLVRDSSGSLILAGRKKAEKNWSILMLEALALKEGLSKYLNHSACKSIPLMVESDSKTL 219
           GW++R   G ++LAG +  E   ++ +LEA A+ EGL    N    +  PL +E+DS  +
Sbjct: 97  GWIIRSWDGDIVLAGNRFVEACNNVKLLEASAILEGLRNLTNLGVLR--PLHIETDSAEV 156

Query: 220 INILQGQDS-------VLSEVRNIVDLAE 242
            ++L  +         V+ E+ N+ D  E
Sbjct: 157 ESLLNRKREDLTKTGWVVEEILNLRDSCE 183

[Close]

BLAST of Spg029256 vs. ExPASy TrEMBL
Match: A0A6J5VSP2 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51717 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-09
Identity = 43/113 (38.05%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 125 PKNQESHVFWSPPPLSVLKLNIDASWSSSSSSGGLGWLVRDSSGSLILAGRKKAEKNWSI 184
           P +  + + W  PP  +LK+N DA+WS+    GG+GW++RDS G L+ AG +      S 
Sbjct: 280 PVSSPAPLSWCKPPPGLLKVNSDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSA 339

Query: 185 LMLEALALKEGLSKYLNHSACKSIPLMVESDSKTLINILQGQDSVLSEVRNIV 238
           LM+E LA++  LS+  N        ++VESDS+  I +L G+ +V S++  IV
Sbjct: 340 LMMELLAIRHALSECANFHL---TDIIVESDSQKGILMLNGRATVDSDLEGIV 389

[Close]

BLAST of Spg029256 vs. ExPASy TrEMBL
Match: A0A6J5WPU6 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS20372 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.4e-09
Identity = 42/113 (37.17%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 125 PKNQESHVFWSPPPLSVLKLNIDASWSSSSSSGGLGWLVRDSSGSLILAGRKKAEKNWSI 184
           P +  + + W  PP  +LK+N DA+WS+    GG+GW++RDS G L+ AG +      S 
Sbjct: 787 PVSSPAPLSWCKPPPGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSA 846

Query: 185 LMLEALALKEGLSKYLNHSACKSIPLMVESDSKTLINILQGQDSVLSEVRNIV 238
           +M+E LA++  LS+  N        ++VESDS+  I +L G+ +V S++  IV
Sbjct: 847 IMMELLAIRHALSECANFHL---TDIIVESDSQKGILMLNGRATVDSDLEGIV 896

[Close]

BLAST of Spg029256 vs. ExPASy TrEMBL
Match: A0A6J5UE59 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23353 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.4e-09
Identity = 42/113 (37.17%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 125  PKNQESHVFWSPPPLSVLKLNIDASWSSSSSSGGLGWLVRDSSGSLILAGRKKAEKNWSI 184
            P +  + + W  P L +LK+N DA+WS+    GG+GW++RDS G L+ AG +      S 
Sbjct: 1118 PASSPAPLSWCKPSLGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSA 1177

Query: 185  LMLEALALKEGLSKYLNHSACKSIPLMVESDSKTLINILQGQDSVLSEVRNIV 238
            +M+E LA++  LS+  N        ++VESDS+  I +L G+ +V S++  IV
Sbjct: 1178 IMMELLAIRHALSECANFHL---TDIIVESDSQKGILMLNGRATVDSDLEGIV 1227

[Close]

BLAST of Spg029256 vs. ExPASy TrEMBL
Match: A0A6J5UF50 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23354 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.4e-09
Identity = 42/113 (37.17%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 125 PKNQESHVFWSPPPLSVLKLNIDASWSSSSSSGGLGWLVRDSSGSLILAGRKKAEKNWSI 184
           P +  + + W  P L +LK+N DA+WS+    GG+GW++RDS G L+ AG +      S 
Sbjct: 250 PASSPAPLSWCKPSLGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSA 309

Query: 185 LMLEALALKEGLSKYLNHSACKSIPLMVESDSKTLINILQGQDSVLSEVRNIV 238
           +M+E LA++  LS+  N        ++VESDS+  I +L G+ +V S++  IV
Sbjct: 310 IMMELLAIRHALSECANFHL---TDIIVESDSQKGILMLNGRATVDSDLEGIV 359

[Close]

BLAST of Spg029256 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 52.8 bits (125), Expect = 5.0e-07
Identity = 29/96 (30.21%), Postives = 50/96 (52.08%), Query Frame = 0


Query: 132 VFWSPPPLSVLKLNIDASWSSSSSSGGLGWLVRDSSGSLILAGRKKAEKNWSILMLEALA 191
           V W  PP   +K N DA+W   +   G+GW++R+ SG ++  G +   +  ++L  E  A
Sbjct: 135 VQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAELEA 194

Query: 192 LKEGLSKYLNHSACKSIPLMVESDSKTLINILQGQD 228
           L+  +   L  S      ++ ESD++ L+N+L   D
Sbjct: 195 LRWAV---LTMSRFNYKRIIFESDAQALVNLLNSDD 227

[Close]

BLAST of Spg029256 vs. TAIR 10
Match: AT1G27870.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 3.6e-05
Identity = 29/100 (29.00%), Postives = 49/100 (49.00%), Query Frame = 0


Query: 126 KNQESHVFWSPPPLSVLKLNIDASWSSSSSSGGLGWLVRDSSGSLILAGRKKAEKNWSIL 185
           + +++H  W  P    +K N D S+ +       GW+VRDS+GS +LAG+    K  + L
Sbjct: 44  REEDNHDRWRRPERGWIKCNFDGSFVNGDVKSKAGWVVRDSNGSYLLAGQAIGRKVDNAL 103

Query: 186 MLEALALKEGLSKYLNHSACKSIPLMVESDSKTLINILQG 226
             E  AL   +    +H   +   +  E D+K L +++ G
Sbjct: 104 ESEIQALIISMQHCWSHGYKR---VCFEGDNKMLFDLING 140

The following BLAST results are available for this feature:

BLAST of Spg029256 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155262.1	3.1e-11	30.87	uncharacterized protein LOC111022403 [Momordica charantia]	[more]
CAB4291403.1	2.2e-09	38.05	unnamed protein product [Prunus armeniaca]	[more]
CAB4274760.1	2.9e-09	37.17	unnamed protein product [Prunus armeniaca]	[more]
CAB4274761.1	2.9e-09	37.17	unnamed protein product [Prunus armeniaca]	[more]
CAB4303756.1	2.9e-09	37.17	unnamed protein product [Prunus armeniaca]	[more]

BLAST of Spg029256 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg029256 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNV9	1.5e-11	30.87	uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J5VSP2	1.1e-09	38.05	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51717 PE=4 S...	[more]
A0A6J5WPU6	1.4e-09	37.17	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]
A0A6J5UE59	1.4e-09	37.17	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]
A0A6J5UF50	1.4e-09	37.17	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23354 PE=4 S...	[more]

BLAST of Spg029256 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34320.1	5.0e-07	30.21	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G27870.1	3.6e-05	29.00	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 145..238 e-value: 8.6E-14 score: 51.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 141..259 e-value: 2.9E-7 score: 32.5
None	No IPR available	PANTHER	PTHR47074	BNAC02G40300D PROTEIN	coord: 131..236
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 142..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg029256.1	Spg029256.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity