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Spg029142 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGAGATATTGAGCTCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACAATGCTGTCATGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCATAGGATTAGTGAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTCGTTAAAACGTTTGATGTACTTAATATGCCTTGCTAGATTTTTAATGACGAACTTGCGAGATGTTTTAGAAAGCCTTTATCCTTACACGTTTATGTTAAACGCTTTGATTGAGCATATTTAGACGTTTAAAGGCTTATCACGTGTTTTGATTTCCGGATTTAGAGTTTTAAAGTTAGTCACTCACTGGGCTTCATAGCTTATTCTTTCAAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGCTCCAGATCAAGCTCCAAAACGTGGGTGGAGTTGTATATTGAGTCTGTCTATTATGTAAATGTTTTGTAAGGATTGAATAATTTAGTCCTAGAGGTTGTGGTTGTATAAACTCTAGTTGTATATGTTTTTGGTTGTGATATCTATATCAGGTTATTATTTGAACCAAGTTATGTCAGGGCGGCACCTCGTGTTTGTTGAAAGTTTTTTTTCTTCAGGGATTCCGCTGTGTTCTGTTTCATGTAGAATATTTTATATCTATGATTAGTATGTTTATCAGGTTCAACGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTCTGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGGGTTGCAGTTTGAAAAAGAAAAAAAAAAGAGAAAATAAGGAAATGGGCAATTGCCCGGTCAAAAGGGGGAAAAGGAAAAGAGGGGGGAAACTTCCCCCCAATTTTTCGGTCAACTAGCTTTTTTTTTTTTTTAAAAAAAGATCTCAGCTCTCTCTCTCCCTCACGGTCTCTCTCTCCCTCGCGGCTCCCTCTCCCTCTCTGCAACCTCCGTGTTGCCGCCGTCTCCCACCGTGAAGCGCACGCCGACGCCGCCACCACCGTTTGTGCCGCCGCCGGTAAGCTCTCTGTCTCTCTCTCTCTCTCTCTCGTTTTCGTCTCTCTCTCTCTAACCCGTCTCTCTCTCTCCCTCTTTGCAACCTCAGCCGTCTTTCGCCACCGCCGCCTCTCGCCGTCAAGCTCCGCCGTTGCCGTGCCATCGCCGACCGCCGCAAGCCGCCGTCTGGTAACGCCTCCCCCTCAGTTCTTTCTCTCTCTCGGCTTCTCTCTCTGCTTTGTTAGTAATGGCCGCACCTTTTCCGTTCAGATCTGTCCGTCGTTTCAGACCTGTTCGTCTCTGTCATTCGGAACCGATCGCCGCCACCTCCGCCTCAAGGAAACTGA ATGACTGAGATATTGAGCTCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGCTCCAGATCAAGCTCCAAAACGTGGGTGGAGTTGTATATTGAGTCTGTCTATTATGTAAATGTTTTGTTATTATTTGAACCAAGTTATGTCAGGGCGGCACCTCGTGTTTGTTCAACGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTCTGGGCTAAGCTAGCAGATCTGTCCGTCGTTTCAGACCTGTTCGTCTCTGTCATTCGGAACCGATCGCCGCCACCTCCGCCTCAAGGAAACTGA ATGACTGAGATATTGAGCTCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGCTCCAGATCAAGCTCCAAAACGTGGGTGGAGTTGTATATTGAGTCTGTCTATTATGTAAATGTTTTGTTATTATTTGAACCAAGTTATGTCAGGGCGGCACCTCGTGTTTGTTCAACGTTTCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACGCCATCTTCTGGGCTAAGCTAGCAGATCTGTCCGTCGTTTCAGACCTGTTCGTCTCTGTCATTCGGAACCGATCGCCGCCACCTCCGCCTCAAGGAAACTGA MTEILSSRLYGTVCTQVEIELPVPDTLPTSAESSRSSSKTWVELYIESVYYVNVLLLFEPSYVRAAPRVCSTFQEGQRVSLEEDDVRWLHAIFWAKLADLSVVSDLFVSVIRNRSPPPPPQGN Homology
BLAST of Spg029142 vs. NCBI nr
Match: TYK08952.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 99.8 bits (247), Expect = 1.8e-17 Identity = 62/115 (53.91%), Postives = 71/115 (61.74%), Query Frame = 0
BLAST of Spg029142 vs. NCBI nr
Match: KAA0062407.1 (uncharacterized protein E6C27_scaffold154G002090 [Cucumis melo var. makuwa] >TYK26574.1 uncharacterized protein E5676_scaffold313G001830 [Cucumis melo var. makuwa]) HSP 1 Score: 97.1 bits (240), Expect = 1.2e-16 Identity = 54/98 (55.10%), Postives = 65/98 (66.33%), Query Frame = 0
BLAST of Spg029142 vs. NCBI nr
Match: KAA0052218.1 (uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK01785.1 uncharacterized protein E5676_scaffold113G00130 [Cucumis melo var. makuwa]) HSP 1 Score: 93.2 bits (230), Expect = 1.7e-15 Identity = 50/88 (56.82%), Postives = 61/88 (69.32%), Query Frame = 0
BLAST of Spg029142 vs. NCBI nr
Match: TYK27998.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 89.7 bits (221), Expect = 1.9e-14 Identity = 57/115 (49.57%), Postives = 65/115 (56.52%), Query Frame = 0
BLAST of Spg029142 vs. NCBI nr
Match: KAA0066851.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 89.7 bits (221), Expect = 1.9e-14 Identity = 57/115 (49.57%), Postives = 65/115 (56.52%), Query Frame = 0
BLAST of Spg029142 vs. ExPASy TrEMBL
Match: A0A5D3CCC7 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00430 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 8.7e-18 Identity = 62/115 (53.91%), Postives = 71/115 (61.74%), Query Frame = 0
BLAST of Spg029142 vs. ExPASy TrEMBL
Match: A0A5A7V638 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001830 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 5.6e-17 Identity = 54/98 (55.10%), Postives = 65/98 (66.33%), Query Frame = 0
BLAST of Spg029142 vs. ExPASy TrEMBL
Match: A0A5A7UAH6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00130 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 8.1e-16 Identity = 50/88 (56.82%), Postives = 61/88 (69.32%), Query Frame = 0
BLAST of Spg029142 vs. ExPASy TrEMBL
Match: A0A5D3DX39 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002140 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 9.0e-15 Identity = 57/115 (49.57%), Postives = 65/115 (56.52%), Query Frame = 0
BLAST of Spg029142 vs. ExPASy TrEMBL
Match: A0A5A7VMG9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G002220 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 9.0e-15 Identity = 57/115 (49.57%), Postives = 65/115 (56.52%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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