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Spg029127 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCGAAACACCAGAGAACACCAGAGATCCTCCTGGTTTGCACGAAAATCCTGTGCTCTGTTTTCCATTTCAAAAACCATAAACTTCTCATCAGATTTAGCTCAAGCTTCCTTCATGAAATTGGTTAGAAAATGGATTAAATTTCAAGAAAATCAAACCTCACCTCTTAGTTCCTTCTGTGTAGCTCAAACCGAATCAAAAACCAGAGGTTGACAGGTTGAACTCAGATTCTGCTATGGCTGGCTTTGCATGAGCTTTTCCTATCTTCTTCAACCTCAAAACCACGAAGTTCTTCTTCTTCTTCTTGGATGGAAAATGATGAGGAATGTGGCTGGAAGTGGGCTGAAAATGGGTAGGAGTTGGCTTAGGCGGTGGTGGGTTTGTGCTGTCCATTCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCTTTTCATTTCCCTTTGTGATTTGTTTCTTTTTTTTTTCTTCCATTTTCCTTTTCCTTTTCCTTTTCTTTTCTTTTCTTTCTTCTTTAACTTAGTAAATCCCAACAACTTAAATTCAACCATGAAACCACAATAGATGACAAGAGAAAATGATCCTAGGGAAGTCTCGGGTTTACAAAGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCTGTGACAACGATGCTATCGTGAGTGTTGGGCGAGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATTGTAGAGCTAGTAAACGTTGGTTGTACTGGGCATGCCCTACACAACGTTGATTTGTCATGTTAGTTAAGATGTTTTATATACTTGATATGCCTTGCTAGATTTTAATGACGTACTTGCAGAATATTTGAGAAAGCTTTTATCGTTACACGTTTATGTTGAACGCTTTCATTGAACAGAGTTATATGTTTAAAGGTTTATCACGTGTTCTGATTTGCGGATTTACAGTTTTAAATTTAGTCACTCACTGGGCTTCATAGCTCAATCTTTCAAAATGTTTTCCCACTTTCTAGGTAGAGATTGAGCTCCCGGTGCCTGATAAACTGCCAAAGTTTGCTAAAAGCTTCCCGATCAAGCTTCAATACATGGGTGAAGTTGTTCATTGTGTCTGTTTGTATTGTAAATGTCTTTGTAAGAACTGGATAGTTTATGGTGGTGTAAGCACTAGATGTCGTGGTTGTGTAAACCCTAGATGGATATGTTTTGGGTTGTGATATCTCTATTAGGTTATTTTCCAAACCGAGTTGTGTCAGGGCTGCACTTCATGTATGTCTAAAGGTTTTCAGGGATTCTGCTGTGTTCTGTTACATGTAAAGTATTTTATTTCTATGACTACCATGTTTATCACGTACAACGATTCAGCAGGGTCAACAGGTATCGTTCGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTCCTTGACTAAGCTAGCAGGTAGTTGGGAGGGGGTGTGACAACTTGGTATCAGAGCCAGGTTAGCTCCATGGGAAATGAGACAGGGCAGTTAGCGCTTAGAAGAATCTAGGAAGTAAATACTTAGACGTTGAGTCAGTTCTGATAGAACTGGCAGGGTTTGGTCCAAGTATGGATAAGAGTGTGTCCAGCTAGGACTAGAATGAGGGTAGAAGTTTAGTATCATGCATCTGAGTTAAGTATCTATAGCATGTCTGGAGTCATGCCATCACGTACCAGCAGACGACGCAGGCAGAATCAGGACAGGATGCAGGATCCTACCCAGGGTCAATCTGAAAGGGCATCCAGTACCCCGAGAGTTCAGACTGGGGCAGGAAACGAGCAGTTTTCTAGATCTGAACAGGAGGTAGGTACGTCAGAGAGAGCAAGGCCTAGTGATCCGAAAAAGATGTATGGAATAGAACGACTGAAGAAATTAGGAGCCATAGTGTTTGAGGGTTCCACAGATCCAGCTGACGCCGAGATTTGGTTAAATATGCTTGAGAAATGCTTCGATGTGATGAGCTGTCCTAAGGAGCGAAAAGTCAGATTGGCCACATTCCTGCTGTAGAAGTAGGCAGAGGGATGGTGGAAATCCATATTAGCCAGGCTTAGTGATGCACGAACGTTAGACTGGCAGGCTTTCAGAGGCATATTCGAGGACAAGTATTATCCCAACACATACTGTGAGGCAAAGAGGGATGAGTTTCTAGGGCTGAAGCAAGGGTCACTTTCAGTGGCCGAGTACGAGAGAAAGTTGATAAGGGTAAAAAATATACCTATTTTACCCTTATATTTAGCTCATTTCTTGGTTAAAAGTTGTATGTTGTGATCAATTTACTATTCCCGAGCTCAAAATATGCTTACTTTGATAAGTTAAGGTGTTGAGAATCACTTTTTGTCAAATTTAACTCATTTGTGCTTAAAAAGATTTGATTTTAAGAGAATTTCACTTAGTTTGTTGTTGTGCAGAAAAACAGAGGAAAAACTGGAATTCCCCAGAAATGCGACCGCATTTCTGAGAAGGCAAAAATAAAATGCGACCGCATTTCTGGAAAAATTTGAAGTCGTTCCGAGTTGTCCGCGGGTCGTTGTTGACGAGTCTTCTTCGCACCTCATTGGCTGTTTTGACCTCGAAACTGACTGGGCAACCTTCCAGCACCTATTTCGCAGCTCCTCAACCACTCTCTACACTATATAAGCTCGAGATTCGAAGTCAAATTCATGCAGAACTCACTTGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGACGCCAATGAGTAG ATGCTCGAAACACCAGAGAACACCAGAGATCCTCCTGGTTTGCACGAAAATCCTGTGCTCTGTTATATTCCGTTGTTGACGTTGAGTGTACTCTGTGACAACGATGCTATCGTAGAGATTGAGCTCCCGGTGCCTGATAAACTGCCAAAGTTTGCTAAAAGCTTCCCGATCAAGCTTCAATACATGGGTGAAGTTGTTCATTGTCAGGGTCAACAGGTATCGTTCGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTCCTTGACTAAGCTAGCAGGCAAAAATAAAATGCGACCGCATTTCTGGAAAAATTTGAAGTCGTTCCGAGTTGTCCGCGGGTCGTTGTTGACGAGTCTTCTTCGCACCTCATTGGCTGTTTTGACCTCGAAACTGACTGGGCAACCTTCCAGCACCTATTTCGCAGCTCCTCAACCACTCTCTACACTATATAAGCTCGAGATTCGAAGTCAAATTCATGCAGAACTCACTTGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGACGCCAATGAGTAG ATGCTCGAAACACCAGAGAACACCAGAGATCCTCCTGGTTTGCACGAAAATCCTGTGCTCTGTTATATTCCGTTGTTGACGTTGAGTGTACTCTGTGACAACGATGCTATCGTAGAGATTGAGCTCCCGGTGCCTGATAAACTGCCAAAGTTTGCTAAAAGCTTCCCGATCAAGCTTCAATACATGGGTGAAGTTGTTCATTGTCAGGGTCAACAGGTATCGTTCGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTCCTTGACTAAGCTAGCAGGCAAAAATAAAATGCGACCGCATTTCTGGAAAAATTTGAAGTCGTTCCGAGTTGTCCGCGGGTCGTTGTTGACGAGTCTTCTTCGCACCTCATTGGCTGTTTTGACCTCGAAACTGACTGGGCAACCTTCCAGCACCTATTTCGCAGCTCCTCAACCACTCTCTACACTATATAAGCTCGAGATTCGAAGTCAAATTCATGCAGAACTCACTTGGAAGAAAAGGGTGGTGACAGAACCCTGGCTCGACGCCAATGAGTAG MLETPENTRDPPGLHENPVLCYIPLLTLSVLCDNDAIVEIELPVPDKLPKFAKSFPIKLQYMGEVVHCQGQQVSFEEDDVCWLHAISLTKLAGKNKMRPHFWKNLKSFRVVRGSLLTSLLRTSLAVLTSKLTGQPSSTYFAAPQPLSTLYKLEIRSQIHAELTWKKRVVTEPWLDANE Homology
BLAST of Spg029127 vs. NCBI nr
Match: TYK27998.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 68.6 bits (166), Expect = 6.4e-08 Identity = 40/76 (52.63%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of Spg029127 vs. NCBI nr
Match: KAA0066851.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 68.6 bits (166), Expect = 6.4e-08 Identity = 40/76 (52.63%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of Spg029127 vs. NCBI nr
Match: TYK11725.1 (uncharacterized protein E5676_scaffold304G00370 [Cucumis melo var. makuwa]) HSP 1 Score: 68.6 bits (166), Expect = 6.4e-08 Identity = 37/70 (52.86%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of Spg029127 vs. NCBI nr
Match: TYK05030.1 (uncharacterized protein E5676_scaffold143G002850 [Cucumis melo var. makuwa]) HSP 1 Score: 68.2 bits (165), Expect = 8.4e-08 Identity = 41/94 (43.62%), Postives = 50/94 (53.19%), Query Frame = 0
BLAST of Spg029127 vs. NCBI nr
Match: KAA0037515.1 (uncharacterized protein E6C27_scaffold277G001260 [Cucumis melo var. makuwa] >TYK01990.1 uncharacterized protein E5676_scaffold808G001020 [Cucumis melo var. makuwa]) HSP 1 Score: 66.6 bits (161), Expect = 2.4e-07 Identity = 37/69 (53.62%), Postives = 41/69 (59.42%), Query Frame = 0
BLAST of Spg029127 vs. ExPASy TrEMBL
Match: A0A5D3DX39 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002140 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 3.1e-08 Identity = 40/76 (52.63%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of Spg029127 vs. ExPASy TrEMBL
Match: A0A5A7VMG9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G002220 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 3.1e-08 Identity = 40/76 (52.63%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of Spg029127 vs. ExPASy TrEMBL
Match: A0A5D3CJL4 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00370 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 3.1e-08 Identity = 37/70 (52.86%), Postives = 43/70 (61.43%), Query Frame = 0
BLAST of Spg029127 vs. ExPASy TrEMBL
Match: A0A5D3C0X3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002850 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.0e-08 Identity = 41/94 (43.62%), Postives = 50/94 (53.19%), Query Frame = 0
BLAST of Spg029127 vs. ExPASy TrEMBL
Match: A0A5D3BSA6 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G001020 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.2e-07 Identity = 37/69 (53.62%), Postives = 41/69 (59.42%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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