Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATTGATGAACTGCTGAATGAGTGGAAAAGATTCAGACTTATGGATCGGGAAATTGAACATCATATAACGTTGGAGGATGAGGAAGAAATAGTCATAAATGGACAAGTTGAAAAGTGTCTGATTGGAAAGCTTCTTACCAGTCGAGTCATAGCATTGCCAGCAATTAAGAACGTTTTATCAGGAGCTTGGAAGACAAGGAATAAAGTGAGCTTTGAAACAATGGGAAAAAATGTCTTCTTGTTCAGATTTGAAGATCATCTTGATAAAGAATGGGTTTTCAAGAATGGACCGTGGCTTTTCGATAAATATCTAATAGCCCTTGAAGAGCCATGTGTGAACAACAGGATATCGGATATGGAGTTCAAGGAAGTGGCTTTTTGGATGAGACTGATTAACTTGCCCATTGGCTTTAGAAGCAGATCAGTGGCGGAGAAGATTGGAAATAAGATTGGGAAATTTCTTGAAATGGATACTGAAAAAGATGAGTTTTCTTGGGGTAACAGCATGAGGGTCAATGTTCAGATAGACATTTCTAAGCCTCTAATCAGGGGATTTATGCTGAAATCAAATGGGATAAAGGAGGACTGCTGGGTGACGATTAGATATGAAAGACTCCTGGATTTCTGCTTCAACTGCGGCTGCATTGGTCACATGGCAAAAGAGTGTTTAATAACTCAGGCTAAGGAAGGTAACTTTGAGTTTGGGGCTTGGATGAGATTCCAAGGTTTTTTTAGAACAACAACGAAAACTGATGGCCCAAAAAAAAAGGAAGAGAATCCAGAAGGAGAAATAAAGGAGGGAAAGGCTGAAACAAGTAATGAGAAGGGTAAAGGAATTATAACCATGGAAGAAAACAGTCAAGAGGAAGATAAAAGAATGAAAGAAGGGAAAACAAAGTCTTATATGTTTGAGACTGGAAACTGTAGCAACCTAAACATGAATTTAATTCCAGATATCAATATGAATCTTGCAAACAGAATGGAGATGATGGAAAATATGGCTGTGGAAGAGAGCTCAAGCGATAAGCAGAGTGAGGAGAATAATTCAGTCGACCTTGAAATACCGACAAGAAAGAAGTCAAGCTGGAAAAGACGGACAAGAGTAGGCTCAGTGGAGAACAAAAAGGAAGAAATGGTTGTTCTATCAGGAAGGAAGAGGAAAGGGAAATAA
mRNA sequence
ATGGATATTGATGAACTGCTGAATGAGTGGAAAAGATTCAGACTTATGGATCGGGAAATTGAACATCATATAACGTTGGAGGATGAGGAAGAAATAGTCATAAATGGACAAGTTGAAAAGTGTCTGATTGGAAAGCTTCTTACCAGTCGAGTCATAGCATTGCCAGCAATTAAGAACGTTTTATCAGGAGCTTGGAAGACAAGGAATAAAGTGAGCTTTGAAACAATGGGAAAAAATGTCTTCTTGTTCAGATTTGAAGATCATCTTGATAAAGAATGGGTTTTCAAGAATGGACCGTGGCTTTTCGATAAATATCTAATAGCCCTTGAAGAGCCATGTGTGAACAACAGGATATCGGATATGGAGTTCAAGGAAGTGGCTTTTTGGATGAGACTGATTAACTTGCCCATTGGCTTTAGAAGCAGATCAGTGGCGGAGAAGATTGGAAATAAGATTGGGAAATTTCTTGAAATGGATACTGAAAAAGATGAGTTTTCTTGGGGTAACAGCATGAGGGTCAATGTTCAGATAGACATTTCTAAGCCTCTAATCAGGGGATTTATGCTGAAATCAAATGGGATAAAGGAGGACTGCTGGGTGACGATTAGATATGAAAGACTCCTGGATTTCTGCTTCAACTGCGGCTGCATTGGTCACATGGCAAAAGAGTGTTTAATAACTCAGGCTAAGGAAGGTAACTTTGAGTTTGGGGCTTGGATGAGATTCCAAGGTTTTTTTAGAACAACAACGAAAACTGATGGCCCAAAAAAAAAGGAAGAGAATCCAGAAGGAGAAATAAAGGAGGGAAAGGCTGAAACAAGTAATGAGAAGGGTAAAGGAATTATAACCATGGAAGAAAACAGTCAAGAGGAAGATAAAAGAATGAAAGAAGGGAAAACAAAGTCTTATATGTTTGAGACTGGAAACTGTAGCAACCTAAACATGAATTTAATTCCAGATATCAATATGAATCTTGCAAACAGAATGGAGATGATGGAAAATATGGCTGTGGAAGAGAGCTCAAGCGATAAGCAGAGTGAGGAGAATAATTCAGTCGACCTTGAAATACCGACAAGAAAGAAGTCAAGCTGGAAAAGACGGACAAGAGTAGGCTCAGTGGAGAACAAAAAGGAAGAAATGGTTGTTCTATCAGGAAGGAAGAGGAAAGGGAAATAA
Coding sequence (CDS)
ATGGATATTGATGAACTGCTGAATGAGTGGAAAAGATTCAGACTTATGGATCGGGAAATTGAACATCATATAACGTTGGAGGATGAGGAAGAAATAGTCATAAATGGACAAGTTGAAAAGTGTCTGATTGGAAAGCTTCTTACCAGTCGAGTCATAGCATTGCCAGCAATTAAGAACGTTTTATCAGGAGCTTGGAAGACAAGGAATAAAGTGAGCTTTGAAACAATGGGAAAAAATGTCTTCTTGTTCAGATTTGAAGATCATCTTGATAAAGAATGGGTTTTCAAGAATGGACCGTGGCTTTTCGATAAATATCTAATAGCCCTTGAAGAGCCATGTGTGAACAACAGGATATCGGATATGGAGTTCAAGGAAGTGGCTTTTTGGATGAGACTGATTAACTTGCCCATTGGCTTTAGAAGCAGATCAGTGGCGGAGAAGATTGGAAATAAGATTGGGAAATTTCTTGAAATGGATACTGAAAAAGATGAGTTTTCTTGGGGTAACAGCATGAGGGTCAATGTTCAGATAGACATTTCTAAGCCTCTAATCAGGGGATTTATGCTGAAATCAAATGGGATAAAGGAGGACTGCTGGGTGACGATTAGATATGAAAGACTCCTGGATTTCTGCTTCAACTGCGGCTGCATTGGTCACATGGCAAAAGAGTGTTTAATAACTCAGGCTAAGGAAGGTAACTTTGAGTTTGGGGCTTGGATGAGATTCCAAGGTTTTTTTAGAACAACAACGAAAACTGATGGCCCAAAAAAAAAGGAAGAGAATCCAGAAGGAGAAATAAAGGAGGGAAAGGCTGAAACAAGTAATGAGAAGGGTAAAGGAATTATAACCATGGAAGAAAACAGTCAAGAGGAAGATAAAAGAATGAAAGAAGGGAAAACAAAGTCTTATATGTTTGAGACTGGAAACTGTAGCAACCTAAACATGAATTTAATTCCAGATATCAATATGAATCTTGCAAACAGAATGGAGATGATGGAAAATATGGCTGTGGAAGAGAGCTCAAGCGATAAGCAGAGTGAGGAGAATAATTCAGTCGACCTTGAAATACCGACAAGAAAGAAGTCAAGCTGGAAAAGACGGACAAGAGTAGGCTCAGTGGAGAACAAAAAGGAAGAAATGGTTGTTCTATCAGGAAGGAAGAGGAAAGGGAAATAA
Protein sequence
MDIDELLNEWKRFRLMDREIEHHITLEDEEEIVINGQVEKCLIGKLLTSRVIALPAIKNVLSGAWKTRNKVSFETMGKNVFLFRFEDHLDKEWVFKNGPWLFDKYLIALEEPCVNNRISDMEFKEVAFWMRLINLPIGFRSRSVAEKIGNKIGKFLEMDTEKDEFSWGNSMRVNVQIDISKPLIRGFMLKSNGIKEDCWVTIRYERLLDFCFNCGCIGHMAKECLITQAKEGNFEFGAWMRFQGFFRTTTKTDGPKKKEENPEGEIKEGKAETSNEKGKGIITMEENSQEEDKRMKEGKTKSYMFETGNCSNLNMNLIPDINMNLANRMEMMENMAVEESSSDKQSEENNSVDLEIPTRKKSSWKRRTRVGSVENKKEEMVVLSGRKRKGK
Homology
BLAST of Spg029107 vs. NCBI nr
Match:
XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])
HSP 1 Score: 209.9 bits (533), Expect = 3.9e-50
Identity = 111/296 (37.50%), Postives = 173/296 (58.45%), Query Frame = 0
Query: 1 MDIDELLNEWKRFRLMDREIEHHITLEDEEEIVINGQVEKCLIGKLLTSRVIALPAIKNV 60
MD + LL +W++F+L E E + ++ + + + L+GKLL R+I+ + V
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 61 LSGAWKTRNKVSFETMGKNVFLFRFEDHLDKEWVFKNGPWLFDKYLIALEEPCVNNRISD 120
L AWK ++++ E++GKN+FLF F D V K GPW FDK LI L++PC + IS+
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 121 MEFKEVAFWMRLINLPIGFRSRSVAEKIGNKIGKFLEMDTEKDEFSWGNSMRVNVQIDIS 180
+EF VAFW+ L +LP+ + ++++A ++GN IG F+++D + FSWG S+R+ V IDI+
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180
Query: 181 KPLIRGFMLKSNGIKEDCWVTIRYERLLDFCFNCGCIGHMAKEC-----LITQAKEGNFE 240
KPL RG + +G CW+ I+YERL DFC+ CG IGH + +C E
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240
Query: 241 FGAWMRFQGFFRTTTKTDGPK-KKEENPEGEIKEGKAETSNEKGKGIITMEENSQE 291
+G W+RF G +K K +K ++P E G + + N K +G+ EE Q+
Sbjct: 241 YGPWLRFVG-----SKAGAQKGRKGKSPAREDSCG-SSSMNSKERGV---EETKQQ 287
BLAST of Spg029107 vs. NCBI nr
Match:
XP_042988686.1 (uncharacterized protein LOC122316216 [Carya illinoinensis])
HSP 1 Score: 183.0 bits (463), Expect = 5.1e-42
Identity = 94/251 (37.45%), Postives = 143/251 (56.97%), Query Frame = 0
Query: 2 DIDELLNEWKRFRLMDREIEHHITLED--EEEIVINGQVEKCLIGKLLTSRVIALPAIKN 61
D+D+L ++R L ++E E + EE + NG K L+ L T + A K
Sbjct: 4 DLDDL---YQRLSLTEQENEAVVVESGDLEESSLCNG---KGLVLSLFTEKHFNREAFKV 63
Query: 62 VLSGAWKTRNKVSFETMGKNVFLFRFEDHLDKEWVFKNGPWLFDKYLIALEEPCVNNRIS 121
+ AW+ V F + N+FL FED DKE V + GPW FDK+L+ ++E N ++
Sbjct: 64 TMKRAWRLVRGVKFRDLHSNIFLANFEDLRDKEKVLREGPWSFDKHLLLVQEVDGNKQVQ 123
Query: 122 DMEFKEVAFWMRLINLPIGFRSRSVAEKIGNKIGKFLEMDTEKDEFSWGNSMRVNVQIDI 181
++ +E +FW+RL +LP+ R+ V +IG KIG+ LE+D + E +WG+ +RV V +DI
Sbjct: 124 QIKIREASFWVRLHDLPLRARNDRVGHRIGAKIGRVLEVDLDSGELAWGDFLRVRVSLDI 183
Query: 182 SKPLIRGFMLKSNGIKEDCWVTIRYERLLDFCFNCGCIGHMAKEC-----LITQAKEGNF 241
KPL+RG S G ++ CWV YERL FCF CGC+GH +EC + A + +F
Sbjct: 184 RKPLLRGTRF-SMGFEDSCWVRFSYERLSTFCFYCGCLGHGDRECERKTQAVPGASDDSF 243
Query: 242 EFGAWMRFQGF 246
+G+W+R +
Sbjct: 244 PYGSWLRASSY 247
BLAST of Spg029107 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 180.6 bits (457), Expect = 2.5e-41
Identity = 94/272 (34.56%), Postives = 148/272 (54.41%), Query Frame = 0
Query: 5 ELLNEWKRFRLMDREIEHHITLEDEEEIVINGQVEKCLIGKLLTSRVIALPAIKNVLSGA 64
+LL EWK F+L E E I ++ ++E+ L+GKL R I P +KN + A
Sbjct: 5 DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64
Query: 65 WKTRNKV-SFETMGKNVFLFRFEDHLDKEWVFKNGPWLFDKYLIALEEPCVNNRISDMEF 124
WK N +++G N+FLF F LD+ ++K+GPW FD+ L+ + +P S+++F
Sbjct: 65 WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124
Query: 125 KEVAFWMRLINLPIGFRSRSVAEKIGNKIGKFLEMDTEKDEFSWGNSMRVNVQIDISKPL 184
++ W+R +LP+G +R +A ++GN +G F E D + WG+++RV V +DISKPL
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184
Query: 185 IRGFMLKSNGIKEDCWVTIRYERLLDFCFNCGCIGHMAKECLITQAKEGNFEFGAWMRFQ 244
RG L +G W+ I+YERL DFC++CG K ++G+W+R+Q
Sbjct: 185 RRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGLSSSRKKH-----------QYGSWLRYQ 244
Query: 245 GFFRTTTKTDGPKKKEENPEGEIKEGKAETSN 276
G T K P+ K+ + K G S+
Sbjct: 245 G----TVKPTMPQMKQPQEDLLDKSGNNSFSS 261
BLAST of Spg029107 vs. NCBI nr
Match:
XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])
HSP 1 Score: 179.9 bits (455), Expect = 4.3e-41
Identity = 87/247 (35.22%), Postives = 139/247 (56.28%), Query Frame = 0
Query: 1 MDIDELLNEWKRFRLMDREIEHHITLEDEEEIVINGQVEKCLIGKLLTSRVIALPAIKNV 60
M LL EWK F+L E + + ++ +E LI KLL+ R I+ +KN
Sbjct: 1 MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60
Query: 61 LSGAWKTRNKV-SFETMGKNVFLFRFEDHLDKEWVFKNGPWLFDKYLIALEEPCVNNRIS 120
L AWK K S + +G N+FLF F D+ + + GPW FD+ LI ++ P +
Sbjct: 61 LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120
Query: 121 DMEFKEVAFWMRLINLPIGFRSRSVAEKIGNKIGKFLEMDTEKDEFSWGNSMRVNVQIDI 180
DM+F+ V+ W+ +L + ++++A ++GN IG F ++++ + F WG+ +RV V+ D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180
Query: 181 SKPLIRGFMLKSNGIKEDCWVTIRYERLLDFCFNCGCIGHMAKEC--LITQAKEGNFEFG 240
KPL RG L +G CW+ I+YERL DF ++CG + H+ K+C + N ++G
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYG 240
Query: 241 AWMRFQG 245
W+RFQG
Sbjct: 241 PWLRFQG 247
BLAST of Spg029107 vs. NCBI nr
Match:
MCH80348.1 (hypothetical protein [Trifolium medium])
HSP 1 Score: 169.5 bits (428), Expect = 5.9e-38
Identity = 99/298 (33.22%), Postives = 156/298 (52.35%), Query Frame = 0
Query: 24 ITLEDEEEIVINGQVEKCLIGKLLTSRVIALPAIKNVLSGAWKTRNKVSFETMGKNVFLF 83
IT+EDEE + + L+GK+ T + A K ++ AW++RN + + + KN++LF
Sbjct: 17 ITVEDEEVCNDDESFSRTLVGKIWTESPYNIRAFKQTMTQAWRSRNPIEIQDLNKNLYLF 76
Query: 84 RFEDHLDKEWVFKNGPWLFDKYLIALEEPCVNNRISDMEFKEVAFWMRLINLPIGFRSRS 143
+F + + V++NGPW FD+ L+ L N + S++ V+FW+R+ +LP+ RS
Sbjct: 77 KFATKREADLVYRNGPWSFDRNLLILNIISGNEQPSELAMDHVSFWVRVYDLPLKLRSEG 136
Query: 144 VAEKIGNKIGKFLEMDTEKDEFSWGNSMRVNVQIDISKPLIRGFMLKSNGIKEDCWVTIR 203
+A+K+GN +G F EMD K+ G +R+ V +D+ KPL RG L G ++ WV +
Sbjct: 137 IAKKLGNTVGTFEEMDF-KEINRMGKFLRMRVSVDLKKPLKRGTKLNFQG--KEIWVDYK 196
Query: 204 YERLLDFCFNCGCIGHMAKEC---------LITQAKEGNFEFGAWMRFQGFFRTTTKTDG 263
YERL +FCF CG IGH ++C ++ +E FG W+R K
Sbjct: 197 YERLPNFCFACGRIGHQMRDCEDIEDHDEVQYSELEEKQQAFGPWLRAS----PLPKMSY 256
Query: 264 PKKKEENPEGEIKEGKAETSNEKGKGIITMEENSQE-EDKRMKEGKTKSYMFETGNCS 312
KKE + K TSN KG+ T +E +E E +R+ + + GN S
Sbjct: 257 EVKKESSSSNCSKSLFPSTSNSKGQNSGTAKEMDEEVEQQRVSDDQHSQQKITKGNMS 307
BLAST of Spg029107 vs. ExPASy TrEMBL
Match:
A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)
HSP 1 Score: 209.9 bits (533), Expect = 1.9e-50
Identity = 111/296 (37.50%), Postives = 173/296 (58.45%), Query Frame = 0
Query: 1 MDIDELLNEWKRFRLMDREIEHHITLEDEEEIVINGQVEKCLIGKLLTSRVIALPAIKNV 60
MD + LL +W++F+L E E + ++ + + + L+GKLL R+I+ + V
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 61 LSGAWKTRNKVSFETMGKNVFLFRFEDHLDKEWVFKNGPWLFDKYLIALEEPCVNNRISD 120
L AWK ++++ E++GKN+FLF F D V K GPW FDK LI L++PC + IS+
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 121 MEFKEVAFWMRLINLPIGFRSRSVAEKIGNKIGKFLEMDTEKDEFSWGNSMRVNVQIDIS 180
+EF VAFW+ L +LP+ + ++++A ++GN IG F+++D + FSWG S+R+ V IDI+
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180
Query: 181 KPLIRGFMLKSNGIKEDCWVTIRYERLLDFCFNCGCIGHMAKEC-----LITQAKEGNFE 240
KPL RG + +G CW+ I+YERL DFC+ CG IGH + +C E
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240
Query: 241 FGAWMRFQGFFRTTTKTDGPK-KKEENPEGEIKEGKAETSNEKGKGIITMEENSQE 291
+G W+RF G +K K +K ++P E G + + N K +G+ EE Q+
Sbjct: 241 YGPWLRFVG-----SKAGAQKGRKGKSPAREDSCG-SSSMNSKERGV---EETKQQ 287
BLAST of Spg029107 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 180.6 bits (457), Expect = 1.2e-41
Identity = 94/272 (34.56%), Postives = 148/272 (54.41%), Query Frame = 0
Query: 5 ELLNEWKRFRLMDREIEHHITLEDEEEIVINGQVEKCLIGKLLTSRVIALPAIKNVLSGA 64
+LL EWK F+L E E I ++ ++E+ L+GKL R I P +KN + A
Sbjct: 5 DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64
Query: 65 WKTRNKV-SFETMGKNVFLFRFEDHLDKEWVFKNGPWLFDKYLIALEEPCVNNRISDMEF 124
WK N +++G N+FLF F LD+ ++K+GPW FD+ L+ + +P S+++F
Sbjct: 65 WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124
Query: 125 KEVAFWMRLINLPIGFRSRSVAEKIGNKIGKFLEMDTEKDEFSWGNSMRVNVQIDISKPL 184
++ W+R +LP+G +R +A ++GN +G F E D + WG+++RV V +DISKPL
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184
Query: 185 IRGFMLKSNGIKEDCWVTIRYERLLDFCFNCGCIGHMAKECLITQAKEGNFEFGAWMRFQ 244
RG L +G W+ I+YERL DFC++CG K ++G+W+R+Q
Sbjct: 185 RRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGLSSSRKKH-----------QYGSWLRYQ 244
Query: 245 GFFRTTTKTDGPKKKEENPEGEIKEGKAETSN 276
G T K P+ K+ + K G S+
Sbjct: 245 G----TVKPTMPQMKQPQEDLLDKSGNNSFSS 261
BLAST of Spg029107 vs. ExPASy TrEMBL
Match:
A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)
HSP 1 Score: 179.9 bits (455), Expect = 2.1e-41
Identity = 87/247 (35.22%), Postives = 139/247 (56.28%), Query Frame = 0
Query: 1 MDIDELLNEWKRFRLMDREIEHHITLEDEEEIVINGQVEKCLIGKLLTSRVIALPAIKNV 60
M LL EWK F+L E + + ++ +E LI KLL+ R I+ +KN
Sbjct: 1 MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60
Query: 61 LSGAWKTRNKV-SFETMGKNVFLFRFEDHLDKEWVFKNGPWLFDKYLIALEEPCVNNRIS 120
L AWK K S + +G N+FLF F D+ + + GPW FD+ LI ++ P +
Sbjct: 61 LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120
Query: 121 DMEFKEVAFWMRLINLPIGFRSRSVAEKIGNKIGKFLEMDTEKDEFSWGNSMRVNVQIDI 180
DM+F+ V+ W+ +L + ++++A ++GN IG F ++++ + F WG+ +RV V+ D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180
Query: 181 SKPLIRGFMLKSNGIKEDCWVTIRYERLLDFCFNCGCIGHMAKEC--LITQAKEGNFEFG 240
KPL RG L +G CW+ I+YERL DF ++CG + H+ K+C + N ++G
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYG 240
Query: 241 AWMRFQG 245
W+RFQG
Sbjct: 241 PWLRFQG 247
BLAST of Spg029107 vs. ExPASy TrEMBL
Match:
A0A392M033 (CCHC-type domain-containing protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0001115 PE=4 SV=1)
HSP 1 Score: 169.5 bits (428), Expect = 2.8e-38
Identity = 99/298 (33.22%), Postives = 156/298 (52.35%), Query Frame = 0
Query: 24 ITLEDEEEIVINGQVEKCLIGKLLTSRVIALPAIKNVLSGAWKTRNKVSFETMGKNVFLF 83
IT+EDEE + + L+GK+ T + A K ++ AW++RN + + + KN++LF
Sbjct: 17 ITVEDEEVCNDDESFSRTLVGKIWTESPYNIRAFKQTMTQAWRSRNPIEIQDLNKNLYLF 76
Query: 84 RFEDHLDKEWVFKNGPWLFDKYLIALEEPCVNNRISDMEFKEVAFWMRLINLPIGFRSRS 143
+F + + V++NGPW FD+ L+ L N + S++ V+FW+R+ +LP+ RS
Sbjct: 77 KFATKREADLVYRNGPWSFDRNLLILNIISGNEQPSELAMDHVSFWVRVYDLPLKLRSEG 136
Query: 144 VAEKIGNKIGKFLEMDTEKDEFSWGNSMRVNVQIDISKPLIRGFMLKSNGIKEDCWVTIR 203
+A+K+GN +G F EMD K+ G +R+ V +D+ KPL RG L G ++ WV +
Sbjct: 137 IAKKLGNTVGTFEEMDF-KEINRMGKFLRMRVSVDLKKPLKRGTKLNFQG--KEIWVDYK 196
Query: 204 YERLLDFCFNCGCIGHMAKEC---------LITQAKEGNFEFGAWMRFQGFFRTTTKTDG 263
YERL +FCF CG IGH ++C ++ +E FG W+R K
Sbjct: 197 YERLPNFCFACGRIGHQMRDCEDIEDHDEVQYSELEEKQQAFGPWLRAS----PLPKMSY 256
Query: 264 PKKKEENPEGEIKEGKAETSNEKGKGIITMEENSQE-EDKRMKEGKTKSYMFETGNCS 312
KKE + K TSN KG+ T +E +E E +R+ + + GN S
Sbjct: 257 EVKKESSSSNCSKSLFPSTSNSKGQNSGTAKEMDEEVEQQRVSDDQHSQQKITKGNMS 307
BLAST of Spg029107 vs. ExPASy TrEMBL
Match:
A0A2K3PIT6 (Ribonuclease H (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g011865 PE=4 SV=1)
HSP 1 Score: 169.1 bits (427), Expect = 3.7e-38
Identity = 107/298 (35.91%), Postives = 156/298 (52.35%), Query Frame = 0
Query: 10 WKRFRLMDREIEHHITLEDEEEIVINGQV-------EKCLIGKLLTSRVIALPAIKNVLS 69
W MD+ E+ +T E+EEEIV++ V ++ L+GKL T + K V+S
Sbjct: 82 WANIYNMDKWKENPLTKEEEEEIVVDDTVACEDESFKRSLVGKLWTEDHFNVRIFKQVVS 141
Query: 70 GAWKTRNKVSFETMGKNVFLFRFEDHLDKEWVFKNGPWLFDKYLIALEEPCVNNRISDME 129
+W+ +N V + + KN+FLFRF D E V +NGPW FD+ L+ L+ + SD+E
Sbjct: 142 QSWRLKNPVEIQDLSKNLFLFRFTSKRDLEMVLRNGPWSFDRNLVILKRISGEEQPSDLE 201
Query: 130 FKEVAFWMRLINLPIGFRSRSVAEKIGNKIGKFLEMDTEKDEFSWGNSMRVNVQIDISKP 189
FW R+ +LP+ RS ++A ++GN IG+F+E D+ KD G +RV V ID+ KP
Sbjct: 202 MFTAEFWARIYDLPLKLRSDAMALRLGNTIGQFVEADS-KDGHRLGKFLRVKVSIDLRKP 261
Query: 190 LIRGFMLKSNGIKEDCWVTIRYERLLDFCFNCGCIGHMAKECLITQAKEGNFE------- 249
L RG +L G + V +YERL +FC+ CG IGH K+C + EGN E
Sbjct: 262 LKRGTVLNYQG--KRLHVFFKYERLPNFCYMCGRIGHQMKDC---EEVEGNEEDGYEDIE 321
Query: 250 -----FGAWMRFQGFFRTTTKTDGPKKKEENPEGEIKEGKAETSNEK-------GKGI 282
+G+W++ K G KKE++ K ETS K GKG+
Sbjct: 322 EKELPYGSWLKAS----PLPKISGDIKKEQSSSSCSKSLFGETSTSKVGSKEGLGKGL 369
BLAST of Spg029107 vs. TAIR 10
Match:
AT3G42140.1 (zinc ion binding;nucleic acid binding )
HSP 1 Score: 63.9 bits (154), Expect = 3.2e-10
Identity = 37/144 (25.69%), Postives = 65/144 (45.14%), Query Frame = 0
Query: 81 FLFRFEDHLDKEWVFKNGPWLFDKYLIALEEPCVNNRISDMEFKEVAFWMRLINLPIGFR 140
FLF+ E+ + + + GPW F+ ++ ++ SD EFK + FW+++ +P+ F
Sbjct: 64 FLFQSEESMFS--ILRRGPWSFNDWMCVIQR--WTKLHSDAEFKRIPFWIQIRGIPLRFL 123
Query: 141 SRSVAEKIGNKIGKFLEMDTEKDEFSWGNSMRVNVQIDISKPLIRGFMLKSNGIKEDCWV 200
+ + IG ++G FLE + +D V+V +
Sbjct: 124 TARIITSIGERMGLFLETNLGRD---------VSV------------------------L 170
Query: 201 TIRYERLLDFCFNCGCIGHMAKEC 225
+YE+L +FC CG + H A EC
Sbjct: 184 KFQYEKLKNFCTTCGMLSHDASEC 170
BLAST of Spg029107 vs. TAIR 10
Match:
AT3G24070.1 (Zinc knuckle (CCHC-type) family protein )
HSP 1 Score: 49.3 bits (116), Expect = 8.2e-06
Identity = 28/105 (26.67%), Postives = 50/105 (47.62%), Query Frame = 0
Query: 129 WMRLINLPIGFRSRSVAEKIGNKIGKFLEMDTEKDEFSWGN-SMRVNVQIDISKPLIRGF 188
W+++ +PI + +I + +G+ +E++ + + RVNV +D +
Sbjct: 2 WLKIRGIPIQYLCDGTVREIASSMGEVMEVELDDGMVDLSSVRARVNVCVDTRLCFKKVA 61
Query: 189 MLKSNGIKEDCWVTIRYERL------LDFCFNCGCIGHMAKECLI 227
S +K V+ RYE + FCFNCG + H+A+ CLI
Sbjct: 62 RFDSGEVK---IVSFRYEDIGMSKARFKFCFNCGDMNHLARNCLI 103
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022156185.1 | 3.9e-50 | 37.50 | uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... | [more] |
XP_042988686.1 | 5.1e-42 | 37.45 | uncharacterized protein LOC122316216 [Carya illinoinensis] | [more] |
XP_022158377.1 | 2.5e-41 | 34.56 | uncharacterized protein LOC111024874 [Momordica charantia] | [more] |
XP_022132681.1 | 4.3e-41 | 35.22 | uncharacterized protein LOC111005481 [Momordica charantia] | [more] |
MCH80348.1 | 5.9e-38 | 33.22 | hypothetical protein [Trifolium medium] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DU55 | 1.9e-50 | 37.50 | uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DX30 | 1.2e-41 | 34.56 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A6J1BSZ1 | 2.1e-41 | 35.22 | uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A392M033 | 2.8e-38 | 33.22 | CCHC-type domain-containing protein (Fragment) OS=Trifolium medium OX=97028 GN=A... | [more] |
A0A2K3PIT6 | 3.7e-38 | 35.91 | Ribonuclease H (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g011865 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
AT3G42140.1 | 3.2e-10 | 25.69 | zinc ion binding;nucleic acid binding | [more] |
AT3G24070.1 | 8.2e-06 | 26.67 | Zinc knuckle (CCHC-type) family protein | [more] |