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Spg029098 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTCGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGATGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTCAATCGGTCATGTTAGTTAAAACGTTTGATGTACTTAATATGCCTTGCTAGATTTTTAATGACGAACTTGCGAGATGTTTTAGAAAGCCTTTATCATTACACGTTTATGTTAAACGCTTGATTGAGCATATTTATACGTTTAAAGGTTTATCACGTGTTTTGACTTCCAGATTTAGAGTTTTAAAATTAGTCACTCATTGGGCTTCGTAGCTCATTATTTCAAAATGTTTTCCACTTTTCAGGTAGAGATCGAGCTCCCAGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTCATATTGTAAATGTTTTGTAAGGGTTGTGTAATATCGTCCTAGAGGTCGTGGATGTATAACCCTAGTTGTATATGTTTTTGGTCGTGATATCTATATCAAGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTTCCGTGGATTCCGCTGTGTGGTGTTTCATATAGAATGTTTTATATATATGATTAGTATGTTTATCAGGTTCAGCGTTTCAATAGGGTCAATAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGGTGTGACATTCATCTTCTTTTATTTCTTCCCTTCTCTTTTTCCCTTCCTCAAGGAGTTGCAAATCCATGGCTACCCTCGTGAGGTTTTCCTCATATTTTCTTTCTTCTTCAGCTTCTAAGGCCCTCTCGGCCTCTTGCTCTTCTTCTTTTCTTTTCTTCCTCATCTCTTTCCTTTGCAACATTGTCTTCCTCAACCATTTTCTGA ATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCAGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTCAGCGTTTCAATAGGGTCAATAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGCTTCTAAGGCCCTCTCGGCCTCTTGCTCTTCTTCTTTTCTTTTCTTCCTCATCTCTTTCCTTTGCAACATTGTCTTCCTCAACCATTTTCTGA ATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCAGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTCAGCGTTTCAATAGGGTCAATAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTTCGGGCTAAGCTAGCAGGTGGTCCGGGAGGGCTTCTAAGGCCCTCTCGGCCTCTTGCTCTTCTTCTTTTCTTTTCTTCCTCATCTCTTTCCTTTGCAACATTGTCTTCCTCAACCATTTTCTGA MTEILSPRLYGTVCTQVEIELPVPDTLPTSAESSRSSSSTWFSVSIGSIGIVRGDDVCWLHAVFRAKLAGGPGGLLRPSRPLALLLFFSSSSLSFATLSSSTIF Homology
BLAST of Spg029098 vs. NCBI nr
Match: TYK27998.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 113.2 bits (282), Expect = 1.3e-21 Identity = 63/103 (61.17%), Postives = 68/103 (66.02%), Query Frame = 0
BLAST of Spg029098 vs. NCBI nr
Match: KAA0066851.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 113.2 bits (282), Expect = 1.3e-21 Identity = 63/103 (61.17%), Postives = 68/103 (66.02%), Query Frame = 0
BLAST of Spg029098 vs. NCBI nr
Match: KAA0062407.1 (uncharacterized protein E6C27_scaffold154G002090 [Cucumis melo var. makuwa] >TYK26574.1 uncharacterized protein E5676_scaffold313G001830 [Cucumis melo var. makuwa]) HSP 1 Score: 107.8 bits (268), Expect = 5.6e-20 Identity = 59/100 (59.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of Spg029098 vs. NCBI nr
Match: TYK01041.1 (uncharacterized protein E5676_scaffold264G00470 [Cucumis melo var. makuwa]) HSP 1 Score: 104.8 bits (260), Expect = 4.7e-19 Identity = 61/108 (56.48%), Postives = 68/108 (62.96%), Query Frame = 0
BLAST of Spg029098 vs. NCBI nr
Match: TYK00848.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 97.4 bits (241), Expect = 7.5e-17 Identity = 57/91 (62.64%), Postives = 59/91 (64.84%), Query Frame = 0
BLAST of Spg029098 vs. ExPASy TrEMBL
Match: A0A5D3DX39 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002140 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 6.4e-22 Identity = 63/103 (61.17%), Postives = 68/103 (66.02%), Query Frame = 0
BLAST of Spg029098 vs. ExPASy TrEMBL
Match: A0A5A7VMG9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G002220 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 6.4e-22 Identity = 63/103 (61.17%), Postives = 68/103 (66.02%), Query Frame = 0
BLAST of Spg029098 vs. ExPASy TrEMBL
Match: A0A5A7V638 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001830 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.7e-20 Identity = 59/100 (59.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of Spg029098 vs. ExPASy TrEMBL
Match: A0A5D3BMJ4 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00470 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.3e-19 Identity = 61/108 (56.48%), Postives = 68/108 (62.96%), Query Frame = 0
BLAST of Spg029098 vs. ExPASy TrEMBL
Match: A0A5D3BP54 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00090 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 3.6e-17 Identity = 57/91 (62.64%), Postives = 59/91 (64.84%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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