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Spg029069 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTCGTGCAAGTGTCGTGCAGAGGCAGTGGAGACCGTGGGTGCTCGGGCTCGCGCGAATCGTCTTCAGAAAGTAGTAGGTATTTGATTTTCCAGCGATTTGGGCAGTGGGTATTCGATTCTTGGCGGTTGTTTGACAATTTGTTGTCCGTAAGTGAAATCTAAAGCATTTTTTAGTCGATTGTGTGTTTAATCGAATGCCTATTAACATTGGTTTTCAATTTTAAGGTACCCGTTGAGATTGGAGCTCAAACTGTCTAATTCAGGCCAAATTAGAACCAAACCAGCAAAATTACAGTTTTGTTTTGGTGAGTTTCTTTCTTCGAATTTTCCTCGTTAGCAATTGTATGCCAAGGGAAAGTTAGTATAATATTTCTACTAACTTTGAGAATGTTATGTCATTGAATTGGATATCTTTTTAACTTAAGAACTTGATTTTGTGTTTAGATTATAAGCTTGATGGAAGTTGATTTTTTTTGAGCTCTTTAATTTGTAGCAGCGGTTTGAGTATTGTTTGAATGGGTAGAAGAAGTATAGTTGCTCCATGTGCAAGTAGGCCTGTGTGGCAAAAGATGTTGCACGATTATATTTTCAGTTTGTGGGAGATGTGGATGATTCAATGCATGCTAAGAAACGGCCGATAGGGTTGAGAGAGATTTGGAGTTGTTGAGAAATGAGGTGAAGAGGTTGGAGATGAAGGTCTCAATGTTTAATTCGACATTGGAGAAACAGGGGAAGGATCTCAAAGAGCTCAATGAGGAGATATTTCTGCTCGGTTCTTAGAAAAACTAGGACTAATAGATGTTTATTGTTGAATTCTTGGGTGTTTGATTACGGATCTTTCTAATGGCAGAAATTTAGAGATGTGCAAAGTCTCTGAAAAGGCAAAAGTATTCACTGATCTTTGGCTTCGATTTTTTTTCATACGAATGATAAAATTTGTGCTAATTGTCATTCTGTTGGGGACAATATTGATCGTTTCTTTATCCCTTTTGCTTATAAATCCTAGGTTTCTTTTGGCTGTTTATTTGAGTTTCAATGGAGCTTGCATAGTTTAGGGATATCTGACTCTTCTTTAAAAAAAAAAAAAAAAGAGTGGTGGTCTTGAGAGTGAAATCATCTATGCTTTGTTGGAATGATTTTACCACTCTATGTTGAAATATTTGGTAGGAAAATAATGTTGGGATTTTTTAAGATAGCTAAAGAGGAGAGTCCTTTTTTAGTTTAATATATCTTACAGCCATCTATTGGAGCTTGTTTAGAAGAAATTTTTGTACTATTCTTCTCATATCATAAGATAGCATTTGGGAGTGTTTGGTAAATCTTAGTTGCTTTTTGGGACTCAGGCGATGTTGCATGCTGATCTCCTTTCTTTTCAATTAATCTTTCCTATGAAAATTGACGATGTACTTGGTTGTTCTTTGAATGATTTTTTTTTTCATTCTTTCTTTTTTGCTGGTTTGTTGTGTGTGTGTTTTTTTGTTTGCTGGTTTTCTTTGCTATAAGGATTCATATATGGTTTGAAGATGATGATTGTTTTCTTGTGGGTAGTGAGCATAGAGACTTGTCTTCACTAGATTAGTACAATCTAACTATGGAACTGTTAGTTTCTTGGTTTCCTAAATTTCTAAACAACTTGAGAGGTTCTGTAATAATTTTCTTTGAAGATCAAATTTTCAATTCTTCAGCTCTTAGATAAAGTTTCATGTGCTATAATAATTTGCTCATGTTAACTGTTGCAGAGTATATGTATACCTGTGGTATGTAATCACATTGTCTTTTTTTAGGAATGGAGCCATGAAACAAAAAACATTAATGTCTCAACTGTTCCACCTAAAATTTGAGGTCAACAATTTATTCTAAGCTCATTTTTTCTTTTCTTGCAATGTTTTGGTTCCTTTATATGGACTTGTTATGTTATACATTATGATGTTTGGTTGCACGTGCAGGAACTCGATAAATCAACTATTGAGTGCAAAAGGTTGCATGAAAGAAGTATGGCTTTGGCTAATGAGCTTGCCGCTTTCAAGTTGTAAGTGCAATTTTGTTGTTAAGGAAAAGGAGGAGAAAAAGTTGTGTTCCCTTTTGTGTGTTCGCATACCAACAATGTTTCCATTTGTATCGTAGGGTATCTGAACTGGATCTTGACGAAGAAGAGGTTCTCAATCTTTCTTCATTGGGGAGATGAATAGATAATAAAAATACAATTGACATTCTAAGGAAATCCTTGGTTTTGCGTAATAGGTCACTTATCTCAATTTCACTTCTGGAAATCTAAAATAATCTTAGAATGTAACTTTTCGCAATTTGGTTTTGTGATTTGACCTTAAATTGAAACTTTGAGTAACTTTACGAATCAAAAGATGCATGGTTCAAGTATGTACAAATAATTCTTGAAGATTAGACCAATAATGATAATATGTATGTATTTCCTAATTCTTCGTTTTTTGTGTTCTTTGAAAAATTCTTAACTTTTCGATGGGAGTTATAAAGAACTAATGACAAAGTGCAATCTTCTTAGGAGGGAAGAGACTCGCTCTCGTAAGAAACTTGAGGAGGCAAAAAAGAAATTAAATAAACTGAAGGTGAGCTCATAATAAATATAATCTCATTTGATGCAATTGATCTAATTTAATGTCTAATGATCATTATCAGGTAAGAGTCCAAGCACTACAGAAAGCCATTGAAGATAAAGATAATGAAGTTTTGGGAGGTTCGAAGGTTTTAAGCATTCATGGGGTTGAGGGTAGTGTGTTGTAA ATGGACTCGTGCAAGTGTCGTGCAGAGGCAGTGGAGACCGTGGGTGCTCGGGCTCGCGCGAATCGTCTTCAGAAAGTAGTAGAAACGGCCGATAGGGTTGAGAGAGATTTGGAGTTGTTGAGAAATGAGGTGAAGAGGTTGGAGATGAAGGTCTCAATGTTTAATTCGACATTGGAGAAACAGGGGAAGGATCTCAAAGAGCTCAATGAGGAGATATTTCTGCTCGAGTATATGTATACCTGTGGTCAACAATTTATTCTAAGCTCATTTTTTCTTTTCTTGCAATGTTTTGGTTCCTTTATATGGACTTGTTATGTTATACATTATGATGTTTGGTTGCACGTGCAGGAACTCGATAAATCAACTATTGAGTGCAAAAGGTTGCATGAAAGAAGTATGGCTTTGGCTAATGAGCTTGCCGCTTTCAAGTTGGTATCTGAACTGGATCTTGACGAAGAAGAGGTAAGAGTCCAAGCACTACAGAAAGCCATTGAAGATAAAGATAATGAAGTTTTGGGAGGTTCGAAGGTTTTAAGCATTCATGGGGTTGAGGGTAGTGTGTTGTAA ATGGACTCGTGCAAGTGTCGTGCAGAGGCAGTGGAGACCGTGGGTGCTCGGGCTCGCGCGAATCGTCTTCAGAAAGTAGTAGAAACGGCCGATAGGGTTGAGAGAGATTTGGAGTTGTTGAGAAATGAGGTGAAGAGGTTGGAGATGAAGGTCTCAATGTTTAATTCGACATTGGAGAAACAGGGGAAGGATCTCAAAGAGCTCAATGAGGAGATATTTCTGCTCGAGTATATGTATACCTGTGGTCAACAATTTATTCTAAGCTCATTTTTTCTTTTCTTGCAATGTTTTGGTTCCTTTATATGGACTTGTTATGTTATACATTATGATGTTTGGTTGCACGTGCAGGAACTCGATAAATCAACTATTGAGTGCAAAAGGTTGCATGAAAGAAGTATGGCTTTGGCTAATGAGCTTGCCGCTTTCAAGTTGGTATCTGAACTGGATCTTGACGAAGAAGAGGTAAGAGTCCAAGCACTACAGAAAGCCATTGAAGATAAAGATAATGAAGTTTTGGGAGGTTCGAAGGTTTTAAGCATTCATGGGGTTGAGGGTAGTGTGTTGTAA MDSCKCRAEAVETVGARARANRLQKVVETADRVERDLELLRNEVKRLEMKVSMFNSTLEKQGKDLKELNEEIFLLEYMYTCGQQFILSSFFLFLQCFGSFIWTCYVIHYDVWLHVQELDKSTIECKRLHERSMALANELAAFKLVSELDLDEEEVRVQALQKAIEDKDNEVLGGSKVLSIHGVEGSVL Homology
BLAST of Spg029069 vs. NCBI nr
Match: XP_038906710.1 (uncharacterized protein LOC120092637 [Benincasa hispida]) HSP 1 Score: 122.1 bits (305), Expect = 5.1e-24 Identity = 97/231 (41.99%), Postives = 114/231 (49.35%), Query Frame = 0
BLAST of Spg029069 vs. NCBI nr
Match: XP_008458166.1 (PREDICTED: E3 ubiquitin-protein ligase TRAIP-like [Cucumis melo]) HSP 1 Score: 117.1 bits (292), Expect = 1.7e-22 Identity = 93/231 (40.26%), Postives = 113/231 (48.92%), Query Frame = 0
BLAST of Spg029069 vs. NCBI nr
Match: XP_004138487.2 (E3 ubiquitin-protein ligase TRAIP isoform X1 [Cucumis sativus]) HSP 1 Score: 112.8 bits (281), Expect = 3.1e-21 Identity = 91/231 (39.39%), Postives = 112/231 (48.48%), Query Frame = 0
BLAST of Spg029069 vs. NCBI nr
Match: XP_031744064.1 (uncharacterized protein LOC101218841 isoform X2 [Cucumis sativus] >KGN45695.1 hypothetical protein Csa_005486 [Cucumis sativus]) HSP 1 Score: 112.8 bits (281), Expect = 3.1e-21 Identity = 89/221 (40.27%), Postives = 109/221 (49.32%), Query Frame = 0
BLAST of Spg029069 vs. NCBI nr
Match: XP_023006548.1 (uncharacterized protein LOC111499239 isoform X1 [Cucurbita maxima]) HSP 1 Score: 112.1 bits (279), Expect = 5.3e-21 Identity = 92/231 (39.83%), Postives = 111/231 (48.05%), Query Frame = 0
BLAST of Spg029069 vs. ExPASy TrEMBL
Match: A0A1S3C7C7 (E3 ubiquitin-protein ligase TRAIP-like OS=Cucumis melo OX=3656 GN=LOC103497686 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 8.0e-23 Identity = 93/231 (40.26%), Postives = 113/231 (48.92%), Query Frame = 0
BLAST of Spg029069 vs. ExPASy TrEMBL
Match: A0A0A0K7I6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G006810 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 1.5e-21 Identity = 89/221 (40.27%), Postives = 109/221 (49.32%), Query Frame = 0
BLAST of Spg029069 vs. ExPASy TrEMBL
Match: A0A6J1L0F5 (uncharacterized protein LOC111499239 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499239 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 2.6e-21 Identity = 92/231 (39.83%), Postives = 111/231 (48.05%), Query Frame = 0
BLAST of Spg029069 vs. ExPASy TrEMBL
Match: A0A6J1L583 (uncharacterized protein LOC111499239 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499239 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 2.6e-21 Identity = 92/231 (39.83%), Postives = 111/231 (48.05%), Query Frame = 0
BLAST of Spg029069 vs. ExPASy TrEMBL
Match: A0A5D3CRM0 (E3 ubiquitin-protein ligase TRAIP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold268G00290 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 2.6e-21 Identity = 98/262 (37.40%), Postives = 120/262 (45.80%), Query Frame = 0
BLAST of Spg029069 vs. TAIR 10
Match: AT4G01270.1 (RING/U-box superfamily protein ) HSP 1 Score: 52.0 bits (123), Expect = 6.1e-07 Identity = 43/128 (33.59%), Postives = 69/128 (53.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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