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Spg029058 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTACCAACTCACTGGAGGTGCACAAGTGGGAATTGCGAGAGATCTCTGCTCCTACTGATTGTAGAAGGCACCCAGTTAGTGAAGCCAAGTCTCACCCATCAAGGCACCTATGTGTGCATAGCACATTAACTACCAACTCACTGGTGGGGCGTCCAGGGGTTTTTAGTCGGAACTTTACTCCCACAGATAGTAGATGGCACCTAGTCTGCGAAGCCGAGTCCTGCCCATTTAGCTCCTCATCTCAGTCTATAAACATCTCAATCCTAGGTGTTTAATTGCCACGGTTCCTACTGGGATAAGTAACCTATCCTCATTTCATATTAGGGCCCCTGTTAACAGAGTCTGATTTAAGTTGCAACCTAACCATCAAGTTTCTTTCCTATAAAGGTTTCTGAAGGGCTAATTTCACATATACTAACTACCTCACCTTTCATCTCATTCAAGCACATATATTATAACTAACATCCAAAACACTAAATAGAAAACGGCATATGTATAGTTTAAACAGCCAACGGCCAAAATCAGCATATCATAATCCAAGTGACATTACTAAACTTAGCCTCTTTATTCACTGTAATGCTACCGAAAATTCGGCAGCATAACGACATATGTATAGTTGACCCCAAATTTTCTTATCACCTGCAAACAAGAGAATACGCTTCTTTATTCAAACTGCCCAACTACAAACTTCCACAACACTTTTGATCAATAGAATAGACTCGGAACTTCCACAAAACAAAGTGAGTCAGGTCTCGCATCCACAACTCAACCATATAGAACATCCTATCTTCCCCAACATAGAGCATTAACAGCATTTAGAGCATACAAAACTTATCCAACAAGAGCATTCTAAACATAAAGCAAACAAAGTATTCTACACAACTGGAACATTCCTCATAATCTAAGCATTTGATACTTTTGAACCAACACTATATTCACAGTGTACCATTCAGAAAAATGCACATAATCAGGATGTTCAGTAACACCAGAATGGATTTCTTATTCACTCACTATGCTTCTATGGATTGCCATAGGAAGGAAGTGACTTTTAAGAAACCAGGTTTGACTGAAGTAGTTTTCAGAGGTGAGAGGAAGATTATTCCTACGAGTTTGATTTCAGCTCTGAAAGCTGAGAAGTTGTTGAGGAAGGGTTGTACAGCATGTCTTGCACACGTAGTAGAGGTGCAAGAAGAAAAGCTGAAACCAGAAGATGTTCCTGTGGTGAACGAATTTCTTAATGTTTTTCCGGCTGATCTATCGGGTTTGCCACCTGATAGAGAGGTGGAGTTCACTATTGAATTGTTACCAGGAACAACACCTATTTCACAGGCACCGTACAGAATGGCTCCGAGCGAGCTTAAGGAGCTAAAGGTACAGTTGCGAGAACTAGTCGACAAGGGATACATCAGGCCCAGCGTATCACCTTGGGGAGCTCCAGTGTTATTCGTGAAGAAGAAAGATGGTACCCTGAGATTATGCATTGATTACAGGCAGTTAAACAAGGTCACGATACGTAACAAGTATCCTCTACCACGCATCGATGACTTGTTTGACCAGTTAAGGGGAGCAGCAGTGTTCTCTAAAATTGATTTGAGGTCAGGATACCACCAGTTGAAGGTTAGGGAATCAGATATTCCTAAGACAGCATTCAGGACGAGGTATGGGCACTATGAGTTTTTAGTGATGCCATTCGGTTTAACGAATGCGCCAGCAGTTTTCATGGACCTCATGAATAGGATCTTCCATCAGTATTTAGATCAGTTTGTGATAGTGTTCATCGACGACATTCTAGTTTATTCAATTGACAGGAAAGCCCATGAGGAACATCTGAGGATTGTTCTACAGACACTACGTGATAAACAGTTGTTCGCTAAGTTCAGCAAATGTGAGTTCTGGTTGAATCAAGTAGTGTTCTTAGGGCATGTAGTTTCAGCGGACGGAGTTAGTGTTGACCCGCAGAAAGTGGAAGCTGTTGTCAACTAGGAGAGACCAGCTAGTGCAACAGAGGTTCGTAGTTTCCTAGGTCTGGCCGGGTACTACAGATGTTTTGTTGAGGGTTTCTCACGATTAGCATTACCCTTGACAGCTTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCGGATAAATGCGAACAGAGTTTCCAGGAGCTGAAAAAGAGATTGGTGACAACGCCTATTCTGACACTTCCTGTAACAGGGAAGGAGTATGTGATCTATTGTGATGCTTCGAGGCAAGGATTAGGTTGTGTACTGATGCAGGAAGGAAAGGTAATAGCTTATGCTTCAAGGCAATTGAAGAAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGAAGTTGTTCTAGCACTGAAGATTTGGAGACATTATTTATTCGGTGAGAAGTGCCACATTTTCACAGATCATAAGAGTTTGAAGTACATCTTTGATCAGAAAGAGCTGAATCTGAGGCAGAGGCGATGGCTAGAACTGATTAAAGACTATGACTGCACCATAGAATATCATCCACGTAAGGCTAACGTGGTAGCAGATGCATTGAGTAGGAAGTCGAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAACAAGCTTGCTAAGTGAGTTAAGAGGTTTCAAGGCAGTTATGACTGCAGGAAGCTCAGGGAGTCTTTTAGCTCAATTTCAAGTTAGGTCTTCTCTAGTAGCAGAGATTGTGAGAAGACAGCGAGAGGATAGTAACTTACCAAAAATGCTTGCAAAGTCCAGGCCCAGAGGCAGAATTTGAGCTGAGAGCAGACGGAGCCATAGTTAAGCAGGGAAGACTATGCGTTCCGAGTATTAGTGAGCTTAAGAGTGCTATATTAAAGGAAGCTCATAGTTCAGCTTATGCTATGCATCCAGGAAGCACGAAGATGTACAGAACTCTGAAGAAAACTTATTGGTGGCCTGGTATGAAGCGGGAGATAGCTGAATATGTCGATTGATGTTTGATCTGCCAACAGGTTCAACCAGTGAGATAGAGGCCAGGAGGACTCCTTAATCCACTGCCAGTGCCAGAATGGAAGTGGGAGCATATTACCATGGATTTTCTGTTTGGATTACCCGTACTTCTAGTGGTCATGATGGTATATGGGTAATAGTGGACAGACTCACCAAGACAGCACGGTTTATACCGATTAAAGCGACGTCTACACTAGATCAGCTAGCTAAACTATACGTCGACAGGATTGTGAGTCAACATGGAGTTCCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAGTTTTGGCTTAGTGTGCAGAAAGCAATGGGAACAAAGTTGAAGTTCAGTACAGCGTTCCATCCCCAGATAGATGGTCAGTCAGAGAGGACCATCCAGACCTTAGAGGACATGTTGAGAGCATGTGTCCGTCAGTTTAAGGGAAGTTGGGATACTCACTTATCACTTATGGAGTTCGCTTATAATAATAGCTACCAGTCTAGTATCGGCATGGCACCATTTGAGGCTTTGTATGGCAGACCATGCAGGACTCCTGTGTGCTGGAACGAAGTGGGAGAGCGAAAGCTAGTTGGTCCTGAGTTGGTACAAGTTACGTCAGACAATATTAAGCTGATTAGGGAGAACCTGAAAATAGCTCAGGATCGACAGAAGAGCTATGCAGACAAGCGACGAAGAGACTTAGAGTTCCAAGTTGGAGATCGAGTTTTCTTAAAGTTATCTCCGTGGAAAGGTGTTCTTCGCTTTGGGAGGAAAGGTAAGCTGAGTCCTAGATATATTGGTCCTTACCAGATAATAGAACGAGTTGGACCAGCAGCCTATAGACTTGAATTGCCAGCGGAACTCGCTCGAATACATGATGTTTTTCATGTGTCCATGTTGAGGAAATATATTCCAGTTCCATCCCATGTGTTGCAAGTGCAACCGGTTGAGCTAAAGGAAGACTTGAGTTATAAAGAGGAAGCGGTTCAAATCCTCGACAGAAAGGAGCAAGTTTTGAGGAACAAAACGATCCCACTCGTGAAAGTTCTTTGGAGACATCACGGAGTAGAGGAGGCAACCTGGGAGTCAGGAGATCAAATGAGGAGGAGTTACCCGACAGTCTTCACCTAAGACTTCTAAATTTCGAGGACGAAATTTCATAAGGGGGAGGTAAGTTGTAAACCCGAGACTTTCTTTAGATAATTTTCTCTTGTCATCTATTGTGGTTTCATGGTTGGATTAAATTGGTTGGAAGTTATTAATTTAGGAATAAAGAATAAAGGAAAAGAAAAGAAAAGAATGGAAATAAAGAAGAAAGAAAAGGAAAAGGAAAAGAAATCAGCAAAACAAAAGAAAACAAAAAAAAAAAAAGAGAAAATGAGTGGGAATGGACAGCACAAAAACCCACCACCGACTAGACTTTTTATCAGCCCATTTTCATTTCATATCTCATCTTTTTCCATCCAAACTTTCAGAGCACTTTAAGGAGAGAGTGAAGGAGGAAGAAGAAGAAGAATTTCGATGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGAGTTCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAACTAAGAGGTAAGGTTTGATTTTCTTGAAATTTAGTTCATTTTCTAGAAAATTTCATGAAGGAAGCTTGAGCTAAATCGTATGAGAAGTTAATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAACTAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCGGGGGTGTACAAGTCGAATCAGAAGCTATATTTGGTATTTTTGGAAAGCGTATTCAATTTCCTACAACCTTCATGAAGATTGCGTGAGCCAAAAATGACTTTAAATAGGGTTAATTTCAGGAGTTAGATAAAGGGTAGCAGGGAACCTCGAATCTGCGTTGTCTGTGTTCGGGGAAATTCTGGGCAAATCGGTTGGGAATCTCATTTTCATTTCTTCAGGTAAGTCGTAGAGTGTTTGAAACTGAAGAGTTTGATGTGTATTTCATTACTTTTGGTTAAGTATTGAGGAAGTTATGAGTATTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAAAGTAGAATGTGAATGTGATTCTTAATCCAATTGTTTAAAAATTCATGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTGGTTATTTGACAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTGAGTGACAAAATGAATTTCGAAAATGGTTTCCAACGGTTGTTCATGTTTAGATGTTTACATGCTTTTCTATGAATGATACATGGTTTTTATGAACAGTTTCAAGCATAAGTTTTGAGCTCAGATTTTCTAATGAGGTTTGTATACGAGCACGTGGCTAATGACTTTATGAAAAGTAGCTGAAACGATATCTTTTAAAGTATGGATTAGCAAGTACTTTTAAACGATTTCCAGTTTTTCACGAGCAAGCTGAGTAAGCTTAAGTTTTACAAAAGATAACGATATGCAGGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCTGAGGCTATATGGTACCGTGTGCACACAAGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGGTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCAGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGGTCATGTTAGTTAAAACGTTTGATGTACTTGATATGCCTTGCTAGATTTTTAATGACGAACTTGCGAGATATTTTAGAAAGCCTTTTTCATTACGCGTTTATGTTAAACGCTTGAATTGAGCATATTTATACGTTTAAAGGTTTATCACGTGTTTTGACTTCCGGATTTAGAGTTTTAAAGTTAGTCACTCACTGGGCTCCATAGCTCATTCTTTCAAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCTAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTAAGGATTGGATAATATAGTCCTAGAGGTCGTGGTTGTATAAACCCTAGTTGTATATGTTTTTGGTTGTGACATCTATATCAGGTTATTATCCGAACCAAGTTATGTCAGGGCGGCACCTCGTGTTTGTAGAAAGATTTTTTTTCAGGGATTCCGCTGTGTTCTGTTTCATGTAGAATGTCTTATATCTATGATTAGTATGTTTATCAGGTTTAACGTTCAGGAGGGTCAGCGAGTATCGTTAGAGGGCGACGATGTCCGTTGGCTTCACGCCATCTTTCGGGCTAAGCTAGCAAGTGGTCCGGGAGGGGGTGTGACAACTTGTCATTGCATGTCTTGGACTAGCGGAACGCATATACTACTTGCGCTAGCTTTGGCACCCCCCAACTTGAAATGGACAATGTCCCCATTGTCCCCCAAACTTACGAGGGAGCGTGATGGCTGA ATGCTTACCAACTCACTGGAGGTGCACAAGTGGGAATTGCGAGAGATCTCTGCTCCTACTGATTGTAGAAGGCACCCAGTTAGTGAAGCCAAGTCTCACCCATCAAGGCACCTATGTGTGCATAGCACATTAACTACCAACTCACTGGTGGGGCGTCCAGGGGTTTTTAGTCGGAACTTTACTCCCACAGATAGTAGATGGCACCTAGTCTGCGAAGCCGAGTCCTGCCCATTTAGCTCCTCATCTCAGTCTATAAACATCTCAATCCTAGAGCACAGGATTTTCGAGCAAACTAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCGGGGGTGTACAAGTCGAATCAGAAGCTATATTTGGTAAGTCGTAGAGTGTTTGAAACTGAAGAGTTTGATGTGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCTAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTTAACGTTCAGGAGGGTCAGCGAGTATCGTTAGAGGGCGACGATGTCCGTTGGCTTCACGCCATCTTTCGGGCTAAGCTAGCAAGTGGTCCGGGAGGGGGTGTGACAACTTGTCATTGCATGTCTTGGACTAGCGGAACGCATATACTACTTGCGCTAGCTTTGGCACCCCCCAACTTGAAATGGACAATGTCCCCATTGTCCCCCAAACTTACGAGGGAGCGTGATGGCTGA ATGCTTACCAACTCACTGGAGGTGCACAAGTGGGAATTGCGAGAGATCTCTGCTCCTACTGATTGTAGAAGGCACCCAGTTAGTGAAGCCAAGTCTCACCCATCAAGGCACCTATGTGTGCATAGCACATTAACTACCAACTCACTGGTGGGGCGTCCAGGGGTTTTTAGTCGGAACTTTACTCCCACAGATAGTAGATGGCACCTAGTCTGCGAAGCCGAGTCCTGCCCATTTAGCTCCTCATCTCAGTCTATAAACATCTCAATCCTAGAGCACAGGATTTTCGAGCAAACTAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCGGGGGTGTACAAGTCGAATCAGAAGCTATATTTGGTAAGTCGTAGAGTGTTTGAAACTGAAGAGTTTGATGTGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGAACAAGCTCTAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTTAACGTTCAGGAGGGTCAGCGAGTATCGTTAGAGGGCGACGATGTCCGTTGGCTTCACGCCATCTTTCGGGCTAAGCTAGCAAGTGGTCCGGGAGGGGGTGTGACAACTTGTCATTGCATGTCTTGGACTAGCGGAACGCATATACTACTTGCGCTAGCTTTGGCACCCCCCAACTTGAAATGGACAATGTCCCCATTGTCCCCCAAACTTACGAGGGAGCGTGATGGCTGA MLTNSLEVHKWELREISAPTDCRRHPVSEAKSHPSRHLCVHSTLTTNSLVGRPGVFSRNFTPTDSRWHLVCEAESCPFSSSSQSINISILEHRIFEQTRRISGVLWCFEHSGVYKSNQKLYLVSRRVFETEEFDVPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLFNVQEGQRVSLEGDDVRWLHAIFRAKLASGPGGGVTTCHCMSWTSGTHILLALALAPPNLKWTMSPLSPKLTRERDG Homology
BLAST of Spg029058 vs. NCBI nr
Match: KAA0062409.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 129.8 bits (325), Expect = 3.5e-26 Identity = 88/190 (46.32%), Postives = 108/190 (56.84%), Query Frame = 0
BLAST of Spg029058 vs. NCBI nr
Match: TYK26572.1 (putative Retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 129.8 bits (325), Expect = 3.5e-26 Identity = 88/190 (46.32%), Postives = 108/190 (56.84%), Query Frame = 0
BLAST of Spg029058 vs. NCBI nr
Match: KAA0058280.1 (uncharacterized protein E6C27_scaffold274G006090 [Cucumis melo var. makuwa]) HSP 1 Score: 129.4 bits (324), Expect = 4.6e-26 Identity = 79/156 (50.64%), Postives = 93/156 (59.62%), Query Frame = 0
BLAST of Spg029058 vs. NCBI nr
Match: TYK11835.1 (uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa]) HSP 1 Score: 128.3 bits (321), Expect = 1.0e-25 Identity = 77/153 (50.33%), Postives = 89/153 (58.17%), Query Frame = 0
BLAST of Spg029058 vs. NCBI nr
Match: TYK25935.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 125.2 bits (313), Expect = 8.6e-25 Identity = 75/149 (50.34%), Postives = 90/149 (60.40%), Query Frame = 0
BLAST of Spg029058 vs. ExPASy TrEMBL
Match: A0A5A7V9N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G002110 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 1.7e-26 Identity = 88/190 (46.32%), Postives = 108/190 (56.84%), Query Frame = 0
BLAST of Spg029058 vs. ExPASy TrEMBL
Match: A0A5D3DSY7 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001810 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 1.7e-26 Identity = 88/190 (46.32%), Postives = 108/190 (56.84%), Query Frame = 0
BLAST of Spg029058 vs. ExPASy TrEMBL
Match: A0A5A7UT17 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006090 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 2.2e-26 Identity = 79/156 (50.64%), Postives = 93/156 (59.62%), Query Frame = 0
BLAST of Spg029058 vs. ExPASy TrEMBL
Match: A0A5D3CJX3 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00520 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 4.9e-26 Identity = 77/153 (50.33%), Postives = 89/153 (58.17%), Query Frame = 0
BLAST of Spg029058 vs. ExPASy TrEMBL
Match: A0A5A7T9P7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1164G00060 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 4.2e-25 Identity = 75/149 (50.34%), Postives = 90/149 (60.40%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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