Spg028891 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg028891
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-protease polyprotein
Locationscaffold5: 15181212 .. 15190556 (-)
RNA-Seq ExpressionSpg028891
SyntenySpg028891
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACTAACTTGGTTAATGAGTTTAAGCCGATTAGTCTCGTATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCCACTGGTAGCTCGTAAAAAGACTTGAAGCAAACAAATATAAATTGTAAATTGAAAGTGTTCAATTTATTTGGGGAATCGTATAATGTATATTGATGCATTATAATATAAAGTTTATGAAACTTTATAATATAATTTTTGAATTAATTTCAAAAATTAATTCTTGAGAGAAAATATTTGAAAGAGTTCAAATAAATTTAATATGAATTGGATTCATATTAATTTTAATAAAATCCCTAAGATTAAATATATGATATTTAATTGGGTAATTAATTAATCATGAAATTAATTAATTATTTATTAAAATTAGAGACCTTTTCCTATTAGGAAAGAAATTATTTGAAAGAGTTCAAATAAATTTAATATGAATTGGATTCATATTAATTTTAATTTTAATAAAATTCCTAAGATTAAATATGTGATATTTAATTGGGTAATTAATTAATTATGGAATTAATTAATTATTAAAATTAGATATTGTTCAGATAATAGATTTGAACTTATTCCTAGACCTTTTCCTATTAGGAAAAGGTCTTGGCCTTTACCTATATATAGGACCCTTGGGGTGGGGTGAAAGGCATCCCATTGTCTCTCCTTCTCTTAGAGATTTCTCCCAAAAGACTCCCACAAGTCTCCTGCTTCAAGAAGTCTTAGAGATATACCGGTGTAGCCGATTGGTGGTGTTCGCACAAGAGGGTTGCTGCGTCTTCAATCTTATTGGCAAGAAAAGGCGAATTGATCAAGGCTTTCTACAAAAGTAAGTTTTCTATGAAATCCTTGATCACTAGGATCAATCTAGTTGATCTTTTAGCATGTTTATAGCCTATGTACAACCCTTTAAATAGAGATTTATTGCTCTAATATTTTGCAAATTGTATTGGTATTTCAATTAGAATCTAAGACTCTGAGTAGGTTCGGTAATACTTTCCGCTGCGTGGGGCTTTTATCCCTTCATCGTTAACTGTGGGTCACTCCACTAAAGACCCACAATTGCACTCTTCTCATTGCAGAATATTTCTGTGTCCACGGATATCGACCAATAACGACAAGTTAGTCCTTCACGAGTGTTCGTAACTCTAGCTGGGTCAAATTACCATTTTACCCCTTAGTTACCTCTACCTCGTTAAGTACCAGTGCTCCTCTAATGAACAACCTGTTTGTGGTCCAACCATCAAATAGAAACCCCTCTCGGGCCAGTGAAAGGGTAGGGCCCTTTGTTCAAGACCCGGAGACACCACGTAAGGGAACACTCATCTACTTCCTCAAAAGTCAGGCAGGAGTGAATTCCATCTTGTGTGATTATGTTCCCAGCTCCCCACTCGGTCTTGTCCCCAAAATGGTAGGCTTATTGAGTCGACGTACTGGCCACTCTCACCCATACAAATCAAAGGACAATCCCTCATGAACAGGAGTCTATAATCCACTTAGGATTTAGACTAAGTTGCCTAGGTCATCCTAGTGAAATAGAAACCTAACTAGTTAACGGTGTTACAGCTAGCGGTTACTATTTCGCGGTCCGGTCTTATGCAAACTCATTGCATAGGATACCCTCACTCGCATGTCTACTACATGGACGCTTTGGATCAATACGTCTGCATCAAATACAAAGCGAGTCGTATCACATAGTGTTACCAGGATAAGGTACCAAGTCTTATCCTTGTACTATAGACCTTTAGGTTGTTACTTGAACATCGATCCCCATATGTCCCGACATACTAGTTCAAGTTACATACAAACAACCTTGGATCTTAGTTTATTGGATTTGGGTCAAATTGTGTAATATTTAACAATAACATTTTATTGCAGAAACTCAATAACACTTTAATAAAACAAGTATACAATTTGTTTACATTCACTATCTACGAGTTTTAGAGCATAAAACCCAACACTGGAGACACCACTTAAGGGAACACACCTCTAATTACCCTAGAGTCGGGAAGGAGTGAATTCCGTCTTGTGTGATTATGTTCCCAGCTCCCCACTCGGTCTTGTCCCCAAAATGGTAGGTTTATTGAGTTGGCGTGCCGGCCACTCTCACCCATACAAATCAAAGGACAATCCCTCATGGATAGGAGTCCATAACTCACTCAGGATTTAGACCAAGTTGCCTAGGTCATCCTAGTGAAATAGAAACCAAACTAACTAACGGTGTTACAGCTAGTGGTTAACTATTTCGCGGTCCGATCTTATGCAAACTCATTGCATAAAATACCACCACTCGCATGTCCACTACATTAACGCGTTGGATCATTGCGTTTGTATCATAATACAAAGCGGGCCGTATCCATAGTGTCACCAGGATAAGGTACCCAGTCTTATCCCTATACTATAGACCCTTTATGCTGTATCTTGAACATTGATCCCCGTATGTCCCTACATACTAGTTCAAGCCTCATGCTAACAACCTAGGATGTTTAGTTTATTGGATTAGGGTTAATGAAACAACATTACTCAATACAAACAAGATAAATGAACAATACATCATTTTATCAATGTTCGGTCAAATGTTACATTTACTATCTACGAGTTTTAGGGCATAAAACCCAACAAACTCCCACTTGAACTAAAACTCAAGATAATGGGAAAAATATATACAAAATAATCCAAAGCTGGAAATGGTAAATGTATATTGTACATTACATAAAAGGTAAATATACAAAATACAATAAACTAGGGCATCCTTACACCCATTACACATCTCCCACTTGCCGTAGATTATACTATATACATGTCTCGCAGACCTAGACTCTCTAGATGACCCTCGAACACTTTAGTCGAGAGGGCCTTTGTAAACAGATCAACAATGTTGTGCTCCAAAGCGATCTTGGTAACAACCACATCTCCTTGTTGCACAATCTCCCGAATTAGGTGATACTTCCTCTCGATGTGTTTTCCTCGTTTATGGTTGCGAGGTTCCTTAGAATTGGCTACAACCCCACTTTTGTCACAGTATAATGTTATGGGCAAGTTCATATTTGGAATAACTTCCAAATCTGTCAAGAAGTTCCTTAGCCAAATTGATTCCTTAGCTGCTTCGCAGCTAACATACTCAGCCTCCATGGTTAAGTCCACTATGCATCTTTGTTTGATGCTTCTCCAAAGTACAACTCCCTCGTTAAAGGTGAACACTGACCCTGACGTGGATTTCCTAGAATTCTTGTCAGACTGGAAGTCAGAGTCGGTGTATCCCGTTAGAACTAACTCTTTAGCCCCAAACACCAGCATGTAGTCCCTCGTTCTCCTAAGATACTTGAGGATTCCTTTAACGGCGGTTCAGTGGTTTAACCATGGATTTGACTGATATCTGCTGACTAGTCCCTACTGCATAACAAATATCAGGCCTAGTGCAGAGCATAACATACATTAAGCTGCCCACTATTGAGGCGTAGGGAATCCGTCTCATATCCTCAATTTCTTGAGGTGTCTTAGGACACTGTTCTTTAGACCGGTGAACCTCATGCCTGAAAGGCAATAAATCCTTCTCGGAGTTTTGCATTGAATATCGAGACACCATTTTGTCGATATACATTCTTGAGACAAGGCTAGTGTTTTGTTCTTTCGATCCTGAATAATTTTGATTCGAAGAGCATATTGGGCCTCTCCTAAATCTTTCATTTGGAATTAGGCCGCTAGCCATTCCTTTACGTCAGACAGATATCCTACATCATTCCCAATGAGTAGGATGTCATCAACATACAGTACCAGGAAAGCTACTTTGTTCTTGTTGATCTTCTTGTAAACATAAGGCTCATCAACATTTTGGTCAAAGCCAAAAGATTTGATCGCAGTATCAAATCTGATATTCCAAGATCTGGAAGCCTGTTTCAACCCATAAATGGATCGATTCAGTTTACAATCTTTTTGCTCTTGACCTTGGGTTATGAACCCTTTGGGTTGAGGCATAAAGATATTCTCTTCAAGATTACTATTCCGAAAGACAGTCTTGACATCCATTTGCCATATTTCATAGTCATAATATGTGGCTATGGATAAGAGAATTCTTATGGACTTTAACATAGCAACAGGAGAAAAGATTTCCTCCTAGTCCACCCCTTCTCCTTGAGTATAACCCTTTGCTACAAGTCTAGCTTTGAAAGTCTGTACTTTCCCAGCTGCATCTCTTTTCCTCTTATAGATCCATTTACACCCTATGGGTTTGACCCCTTAGGTGGATCTACAAGTTCCCAAACTTGATTGAAGTACATAGATTCCATATTTGTACATAACTCGTAGACCTAGACCTTCTAGATGACCTTCATACCCTTTAGCCGAGAGAGCCTTCGTGAATTAATCAACAATATTCCATTTAATTCAATGTGTTTGCTTGTCTTGGGTGTAAGGTTCTTTTGAATTTGCCACAGCACCATTGTATCACTCTAAAGTGTGATGGGAAAGTTCACATTTGGAACACATTCCAAATCAATCAAGAACTTTCTAAGCCTTACAGTCTATATCGCTGTTTCACAAGAAGCTATATTTTCGGCCTATATGGTCAAGACTGTAATTATGCCACACTATAGCTCCTTCGTAAAGTTTGACCCTGGATACTGATGTAGATTTCCTCAATTCCTTATTAGTCTTAAAATCCATGTCAGTGTATCCTGTAAGGATCAAATCCTTAGTCCCATACATGAGCATATAGTTCCTCTTTCTCCTCAGATACTTGAGGATATTCTTAACGGTTTTCCAGTGATCAAATCTTGGATTAGATTGATACTTACTGACAATCCCTATTGCATAGGACATTCGTCTCATGTCCTCAACTTCTTGAGGTGTCTTAGGAAACAGTTTCTTAGGCAAAATGAATTCCACGCCTGAAAGGTAGTGAACCCTTCTTGGAATTCTGCATCTTATATCTAACTAACATCTTGTAGATATAAGACACTTGAGGCAAGGCTAGCTTTTTGTTCCAACGGTTCCTAACAATTTGGATCCGAAGAACAAACTTAGCTTCTCCCAAATTTTCATTTGGAAATGAGCTGCTAGCTCATTTTACTAGTTAGTAAGATAACCTACATCATTCCCAATGACTAGGATATTAATCACATACAACACTAATAAAGCTACTGAATTATTGACGATCTTTAAGACAAGATTCATCAATGTTCTGATCAAAGCCAAAAGATTTGGTCACAGTATCAAATCTTATATTCCAAGGTCGAATTGCTTAGGTCAATCCATGAATGGATCACTTAAGCTTGGAAACCCCTTTGCTTTTGATCTTGCTAAATGAACCATTCTGGTTGAGACATGTAGACACTATTCTCAAGATTACCATTCAAAAGGGTAGTCTTGACATCCATTCAAAATGGACAAGAGTTCTAACAGACTTCAGCATGACGACAGGAGATAAGAATTTCGTACAGTCCCCTGTCTCTGGGTATAACCCTTTGCCATAAGTCTAACCATAAGATTATGTCTCGTTTCTTCTTGTAGATTCATTTGTAATCCATAGGTGTTACCCCATTAGATAGATCTACAAGATCCTAGATGGAATTGAAATCACATATTTTAATTCCAAGTCCATTGCTTTAATCCAATTGGTTCTTGTTAATATCATTCATTGTCTTGCTCTAAGACAATGAATCCTCAATGCCATCATCAGGTATGACGATTTGGGCTTCAATTAAGCCCATGTAACGGTCAGATTGTAGAACAACCCTCCCACTACATTGAGGCACTCTCAACTCTTGAGATAGATGTAACTAACCAGTTGTATTGGCCCTATCAACAACTCTTGTTAAAGGTCCAACATCATCAACAACCCTTGTTGACTTATCAACAACTCTTGTTGATATTTCTGTAGCTTCATCAGTTAATTTACTTAAAACGATCTTACTTTGTGGCTTATTATTTCTCATGCGGTCTTCTTCTGAGAATGTAGCATTTGTCAGTACAAATTCTTTATTCTCTTGTGGATTGAAGAAGTATCCACATCTCTCGTTTTCATGGGGTAGCCTACGAATAGGTATACTGTTGAACAGTGTTCCAGTTTCTTTTGGGTTAGCCACAAGCACGTGTGTTGGACTCCCCAAAAATAACGTAAACTACTTTTACGCCTTATCCACAATTTAAAAGATGTTTCAGAAACACTTTTGATGGAACGGTCTTTGAAATATGTACTGCAGTCAACACTGCATGACCCCAAAACGAGTCAGGTAAATGAGCATAGCTCATAATGAATCGAACCATATTCAATAGGGTTCTATTTCTCATCTCTAATACACTGTTTTCCAAAGGTGTTTCAGGGGTTTGAGAGTTGGGATGTAATTCCATGTTCTATCAAATAGTCTTGGAATCTCAAGTCTCATATACTCTACACCTCGATCAGATCGAAGTGTTTTTATCATCTCATCTAACAAGTTTCCAACTTCAGTTTCAAACCACTTTGAATTTCTCAAGAGCTTTAGATTTAAGTTGCATTAGGTTGAGATACACATACCTTGAATAATTATCTATAATATAGATGGATTGTTCATGCCCTCCCACTGCTTTAACATATTGGACCACAAGTATCCAAATGTACAAGCTCCAAGGGCTTTTTGGCTCTATAGTTCTTTTCAAGCAAAATAATATATTAGTCATATTTCCTTTAAGGCATGACCTATAAGGTAGCAGAGAGTCATTTTCTAACTTGCTTAGAAGTATATTATTGACCAATCTCCCAATCATATTGAGGTAAATATGTCCTAACCTTAAGTGCCAAAGAAAGGTATTTTCCTTTAGGAGAAATCCTTTGCCTTTCATTTCTTTGAGTAGGCCTCAAGCAACTCAGTGTTCATGACTGCTTTACTCTTGATTAGTCTTAAAACATTTATGTTATTTTTTCAGTTCAGCTGAACAAAAAATTAACTCCCTTTTTTGAAATGAACTGCGTTAGTAGGGAAAGGTAAAGAGTAACATTGTTCCAGCCAATAAGATACATAAATCAAATTTCTTTTGATCTTAGGAATTATATACACATTATCTAATAATATGTATTTGCTCCCACTGGAAAAAAATAACTTAACGTTCCTCATTGCTACAACCAAGACAACCTCTCTAGTTCAAAATTTTGAGAGTTATCTCAATAGCATCAATCTGTTGCCAGGAATTCATTCCTTTTAATAAGAAGAACAAATGTGATTTCTGACTGATAACTCTCCAAAAGGGAGTTATTTACACCTTATTTCTATATTGATTTGTGTGTCTTTTGTGCTAAATAGGGTTGCTTTTAGATATATATTATATGTTTTAACCCATTTGGAAGAATGGATGCTTTGGAAGTTATTTTGTGCAGAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGCGCTGCAGCAAAGCAGGGAGCAGAACTGCCACGTCACAGCTCGTTAGCCATTTTAATGAGCCGAAGTTTGTTGAGCTATTCTCGGATTTATGAAGCTTGGAAAGCTTGCCATGTGTCCAAATTGACCTAATTAGGGCTTGCTATCACTCTATAAAAGGAGAGGCCATCTCAAGTCAAATTCATTCCATTCTTGGGAGGAACATTCCACTCTTGGAGAGTTCATTTCCATTATTGGGAGCCGAATAGAGGAGAAAGATTAGGGACTACAAGAAGACCATCAATTACGAAGTCAATCAAGGGAATTAGTATTTTCTTGTGCTATTTTGTAATTATGGATGCATTTACTCAGATTGTAGCGTGTGTCTCTATGCACTTTATGAACTAAGTAACTTTAGGTGTTGGTTAGGAAATATGTAATTGTCGTGCTTAATCTCTATGCAATAAATGTTGATTGATGCATCTTGATTATTTGTTGTGCTCATTTACATTTTATGCCCGCCTGGCCAGCCGGTATGAATATCACTTCCTAGTTTCAAGGATGATTTAGGGAGTGTGTGGCATTTAATCACACTAGATCATTGTGTATTGGTGAACTCCAGTGACTGAGCTAGGGATAGCCAGTTGCCTAGTGCTTGATTGGTAGTACGTCATTGGAGTTGTAACACATTCTAAAAAATTCGGAGTTCCGAGAGGAATCCGCTAATAAGACTGCGAGAGTTGTGCATGATCAATAATATTGCTAGAGCATCTTTTAAAACAATTACTAAATCCTGACCAGCGCCTTTTTCTAATCTGTCTGCTTTATTTGTTTACTTTCTATTCTGTCATTTCTTTTGCCTCAGCATTCTATAAAAATCAATCATTTTAGCCACCTTTGAAACCATTGAAAAACTAAACAAAATAGATAAAGTGAGAGCTAATTCAGACCTTGGATTCGATAAATACTTATTACTTGCTGCAAATTGTGTATACTTGCACAGAGTTCTAGAGTCTATTTACACCTTATTTTTACGCACTCTAGGAGCCCAACAGTGACTATGAATCAAGTATTCAGGTAGAATCGCCATTCTTCACAAATTATGCTTCCAAGACTAGTAAGTCGAATTTACTGTCTTTGGACAATTCTTCTTTGGCTGAGCAAGACTCAATGTCACATTCATTAATAACACTTCTTAATGAATTAAACATTTGGGGCATGAGAACATTTCTCTGTTAAGACTAATATTAAATTATTCGCCACAAATTAGTCGTTTAAGTTTGTTGTATAATCACCGTTATTTATTAAATAGGCATAAGACTATGCACATATTTAATCATTGAATCGCTGAAATAACAAATTACTTGATTATTTATCGCACTAACCCATTACAAGAGCAATACAAACAATTGCATACAATCCAATCAGTTTAGGAAAAAAACAGGCAATCATAGAACCTTAAGACTATTGACTTAGTTTTGCAACGATGTTTCAGAGGTTTAGAGCAACAGCCACTGAAGGGTGATCAACTACTCCTCCTTTGAAATGAGACACTTCTCAGCTAATTCTAATTCCGGAATAACTCATATTCCTATAGACATTAGCCACCGTTATTCGGTCAAGGATTTGTTAACACACTTAACTGATCCTCGTAAGTGTAACCCTCCCACTTTCAGATCACAGAGGCACGCACCACAGGCTACCGGGAGGAAAGACAACTGTTGGTAATTAGTCTAAGTGATCCTATCCTTTTCAGGAGTTCACGGTGTTACGAATCCTATGATCGGGCCCTCCGAAGGGATGGTTGCTCTAGGACAACATGCAGGCGGATCATATGACTCTCACAGTGTGACCTATGGGTGGAGATCGAGGAATACGTTGATACGTGTCCCGCTCCCACTAACTATGGGCACTTTTCCCATTCACCTTGTTATTGACCCATGCAAACACTTTTCGAAGGGAGGCAGCGCTTAA

mRNA sequence

ATGAACAACCTGTTTGTGGTCCAACCATCAAATAGAAACCCCTCTCGGGCCAGTGAAAGGGTAGGGCCCTTTGTTCAAGACCCGGAGACACCACGTAAGGGAACACTCATCTACTTCCTCAAAAGTCAGGCAGGAGTGAATTCCATCTTGTGTGATTATGTTCCCAGCTCCCCACTCGGTCTTGTCCCCAAAATGGATACCCTCACTCGCATGTCTACTACATGGACGCTTTGGATCAATACGTCTGCATCAAATACAAAGCGAGTCGTATCACATAGTGTTACCAGGATAAGCTCCCCACTCGGTCTTGTCCCCAAAATGAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGCGCTGCAGCAAAGCAGGGAGCAGAACTGCCACGTCACAGCTCGTTAGCCATTTTAATGAGCCGAAGTTTGAGCCCAACAGTGACTATGAATCAAGTATTCAGGTAGAATCGCCATTCTTCACAAATTATGCTTCCAAGACTAGAGTTCACGGTGTTACGAATCCTATGATCGGGCCCTCCGAAGGGATGGTTGCTCTAGGACAACATGCAGGCGGATCATATGACTCTCACAGTGTGACCTATGGGTGGAGATCGAGGAATACGTTGATACGTGTCCCGCTCCCACTAACTATGGGCACTTTTCCCATTCACCTTGTTATTGACCCATGCAAACACTTTTCGAAGGGAGGCAGCGCTTAA

Coding sequence (CDS)

ATGAACAACCTGTTTGTGGTCCAACCATCAAATAGAAACCCCTCTCGGGCCAGTGAAAGGGTAGGGCCCTTTGTTCAAGACCCGGAGACACCACGTAAGGGAACACTCATCTACTTCCTCAAAAGTCAGGCAGGAGTGAATTCCATCTTGTGTGATTATGTTCCCAGCTCCCCACTCGGTCTTGTCCCCAAAATGGATACCCTCACTCGCATGTCTACTACATGGACGCTTTGGATCAATACGTCTGCATCAAATACAAAGCGAGTCGTATCACATAGTGTTACCAGGATAAGCTCCCCACTCGGTCTTGTCCCCAAAATGAATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGCGCTGCAGCAAAGCAGGGAGCAGAACTGCCACGTCACAGCTCGTTAGCCATTTTAATGAGCCGAAGTTTGAGCCCAACAGTGACTATGAATCAAGTATTCAGGTAGAATCGCCATTCTTCACAAATTATGCTTCCAAGACTAGAGTTCACGGTGTTACGAATCCTATGATCGGGCCCTCCGAAGGGATGGTTGCTCTAGGACAACATGCAGGCGGATCATATGACTCTCACAGTGTGACCTATGGGTGGAGATCGAGGAATACGTTGATACGTGTCCCGCTCCCACTAACTATGGGCACTTTTCCCATTCACCTTGTTATTGACCCATGCAAACACTTTTCGAAGGGAGGCAGCGCTTAA

Protein sequence

MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSILCDYVPSSPLGLVPKMDTLTRMSTTWTLWINTSASNTKRVVSHSVTRISSPLGLVPKMNILLSDLREQNLRCSKAGSRTATSQLVSHFNEPKFEPNSDYESSIQVESPFFTNYASKTRVHGVTNPMIGPSEGMVALGQHAGGSYDSHSVTYGWRSRNTLIRVPLPLTMGTFPIHLVIDPCKHFSKGGSA
Homology
[Close]
BLAST of Spg028891 vs. NCBI nr
Match: KAA0047518.1 (gag-protease polyprotein [Cucumis melo var. makuwa] >TYK26487.1 gag-protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-07
Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 0 

Query: 1  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSILCDYVPSSPLG 60
          +NN F VQP N+NPSRA+E+VGP VQD ++  KGT     +   GVN  L  YVPS PLG
Sbjct: 24 LNNWFKVQPINQNPSRANEKVGPLVQDLDSVLKGTTYLLSQKWVGVNFHLAPYVPSYPLG 83

Query: 61 L 62
          +
Sbjct: 84 I 84

[Close]
BLAST of Spg028891 vs. NCBI nr
Match: KAA0032973.1 (hypothetical protein E6C27_scaffold269G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 8.9e-05
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 1  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL 51
          +NNLF VQP N+NPSRA+E VGP VQD ++  KGT     +   GVNSIL
Sbjct: 47 LNNLFKVQPINQNPSRANENVGPLVQDLDSVLKGTTYLLSQMWIGVNSIL 96

[Close]
BLAST of Spg028891 vs. NCBI nr
Match: KAA0050441.1 (hypothetical protein E6C27_scaffold175G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-04
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 1  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL 51
          +NN F VQP+N NPSRA+E+VGP VQD ++  KGT     +   GVNS+L
Sbjct: 37 LNNWFKVQPANLNPSRANEKVGPLVQDLDSVLKGTTYLLTRKWVGVNSVL 86

[Close]
BLAST of Spg028891 vs. NCBI nr
Match: KAA0048214.1 (hypothetical protein E6C27_scaffold63G001280 [Cucumis melo var. makuwa] >TYK08042.1 hypothetical protein E5676_scaffold265G001880 [Cucumis melo var. makuwa])

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-04
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 1  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL 51
          +NN F VQP N+NPSRA+E+VGP VQD ++  KGT     +   GVNSIL
Sbjct: 36 LNNWFEVQPINQNPSRANEKVGPLVQDLDSVLKGTTYLLSQKWVGVNSIL 85

[Close]
BLAST of Spg028891 vs. NCBI nr
Match: KAA0062482.1 (hypothetical protein E6C27_scaffold130G00760 [Cucumis melo var. makuwa] >TYK27402.1 hypothetical protein E5676_scaffold325G00860 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 2.0e-04
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 1  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL 51
          +NN F VQP N+NPS A+E+VGPFVQD ++  KGT     +   GVNSIL
Sbjct: 36 LNNCFKVQPINQNPSPANEKVGPFVQDFDSVLKGTTYLLSQKWVGVNSIL 85

[Close]
BLAST of Spg028891 vs. ExPASy TrEMBL
Match: A0A5D3DRY2 (Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00550 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 7.1e-08
Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 0 

Query: 1  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSILCDYVPSSPLG 60
          +NN F VQP N+NPSRA+E+VGP VQD ++  KGT     +   GVN  L  YVPS PLG
Sbjct: 24 LNNWFKVQPINQNPSRANEKVGPLVQDLDSVLKGTTYLLSQKWVGVNFHLAPYVPSYPLG 83

Query: 61 L 62
          +
Sbjct: 84 I 84

[Close]
BLAST of Spg028891 vs. ExPASy TrEMBL
Match: A0A5A7SRB7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold269G00560 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.3e-05
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 1  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL 51
          +NNLF VQP N+NPSRA+E VGP VQD ++  KGT     +   GVNSIL
Sbjct: 47 LNNLFKVQPINQNPSRANENVGPLVQDLDSVLKGTTYLLSQMWIGVNSIL 96

[Close]
BLAST of Spg028891 vs. ExPASy TrEMBL
Match: A0A5A7UA81 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00400 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.6e-05
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 1  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL 51
          +NN F VQP+N NPSRA+E+VGP VQD ++  KGT     +   GVNS+L
Sbjct: 37 LNNWFKVQPANLNPSRANEKVGPLVQDLDSVLKGTTYLLTRKWVGVNSVL 86

[Close]
BLAST of Spg028891 vs. ExPASy TrEMBL
Match: A0A5D3C9R3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001880 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 7.3e-05
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 1  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL 51
          +NN F VQP N+NPSRA+E+VGP VQD ++  KGT     +   GVNSIL
Sbjct: 36 LNNWFEVQPINQNPSRANEKVGPLVQDLDSVLKGTTYLLSQKWVGVNSIL 85

[Close]
BLAST of Spg028891 vs. ExPASy TrEMBL
Match: A0A5A7V2N8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00860 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 9.5e-05
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 1  MNNLFVVQPSNRNPSRASERVGPFVQDPETPRKGTLIYFLKSQAGVNSIL 51
          +NN F VQP N+NPS A+E+VGPFVQD ++  KGT     +   GVNSIL
Sbjct: 36 LNNCFKVQPINQNPSPANEKVGPFVQDFDSVLKGTTYLLSQKWVGVNSIL 85

The following BLAST results are available for this feature:
BLAST of Spg028891 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0047518.11.5e-0754.10gag-protease polyprotein [Cucumis melo var. makuwa] >TYK26487.1 gag-protease pol... [more]
KAA0032973.18.9e-0558.00hypothetical protein E6C27_scaffold269G00560 [Cucumis melo var. makuwa][more]
KAA0050441.11.2e-0454.00hypothetical protein E6C27_scaffold175G00400 [Cucumis melo var. makuwa][more]
KAA0048214.11.5e-0456.00hypothetical protein E6C27_scaffold63G001280 [Cucumis melo var. makuwa] >TYK0804... [more]
KAA0062482.12.0e-0456.00hypothetical protein E6C27_scaffold130G00760 [Cucumis melo var. makuwa] >TYK2740... [more]
BLAST of Spg028891 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg028891 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DRY27.1e-0854.10Gag-protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A5A7SRB74.3e-0558.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UA815.6e-0554.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3C9R37.3e-0556.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V2N89.5e-0556.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Spg028891 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg028891.1Spg028891.1mRNA