Spg028781 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg028781
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold7: 18922644 .. 18923784 (-)
RNA-Seq ExpressionSpg028781
SyntenySpg028781
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATCGAGCAAATACTTATGGTCGAGCCCTCCATCTCCACAGAAAATCCTTCAGAGGTGCTCGATATTGCACCTCTGGACACCTCGACCTTCGTCATCCAACCCGTCAACCTTCAACCCACCCCAAATCTCCCCACCCCTCGAAACCTAACTCCATTTACATCGCCCTTCCCCTCTGTTCTTCCTCTTCTTCCACCACCCGATTGCTCAGCTTCACTCGCATCCGACTCTGTCCGTTTATCTTGTTTTCCTTCCGCAAGCATTTCCCATCCACCATCCACCTCAGCGCAACCCACTTCACCGCAGTTTTCTGAGCGGGAAGTGGCTACAGGAAACTCCCTGATGGAAGAATTAGGGGAGGAAGGTGAATCAACTCATCTGTGAAACGGGCAAGAAAAGGCTGTCGCAGAGGAAATTGCACGCAAGGCCGCCGCAGGTGGACTAGCGGCCAAGGAAAACGAGGGCTCTAGCAAGCAAGCGGAAGATCCGGTAGCCGTAGAAATTGCCGCAACCAACTTAGCAATCATTGCGACGACCATGGAAGTAGAAATCTCTGATTCCGAGGATGAGCTCCCCCTTACTCATCGCAGCACCATACAGTCCACGGGGGTAGTCATCCGCGAACCCTCTGAAAAACCTCCGGCAACCCCCAGCAAGAAAAGGAAAGCACCCACCGCATCCAAAGATAAAGGAAAAGAAAAAGTGGGTGCAACCAAAGGTGGGCAACGACTGGGGAAAATTCCAAGAAGAGAGAGGTTTTAGCTACACCCTCCTGCAAACAATGACAGATCAAATTTCCCAACGCAACTGGGAAACAGTTTGCGAGAATCCCCGCTCCTACGCCCCAGCGCTAGTCCGCGACTTCTATCGGGCGCAGGGGCAAGAAGAAATGGACGAAGTACTGGTTTGAGGCCACTCCGTCGCATTCTCCTCCACATGCATCAACAGCATCTACGAGTTGCGAGACATCCCAAACACAGAAGGGAATGCGCTCCTCGACTGCCTCGATGATGAGTTCCTGAGCGCAGTTCTTCTTGCGGTGGCTAGACCTGAGGCCAAATGGGATGGGCACGGAGCTGCGAGGACCCTCAAATCGCAACTGCTAGACTTTGAGCGACCTGCTGGATGCATTGAGTGA

mRNA sequence

ATGGAAATCGAGCAAATACTTATGGTCGAGCCCTCCATCTCCACAGAAAATCCTTCAGAGGTGCTCGATATTGCACCTCTGGACACCTCGACCTTCGTCATCCAACCCGTCAACCTTCAACCCACCCCAAATCTCCCCACCCCTCGAAACCTAACTCCATTTACATCGCCCTTCCCCTCTGTTCTTCCTCTTCTTCCACCACCCGATTGCTCAGCTTCACTCGCATCCGACTCTGTCCGTTTATCTTGTTTTCCTTCCGCAAGCATTTCCCATCCACCATCCACCTCAGCGCAACCCACTTCACCGCAGTTTTCTGAGCGGGAAGTGGCTACAGGAAACTCCCTGATGGAAGAATTAGGGGAGGAAGGTGGACTAGCGGCCAAGGAAAACGAGGGCTCTAGCAAGCAAGCGGAAGATCCGGTAGCCGTAGAAATTGCCGCAACCAACTTAGCAATCATTGCGACGACCATGGAAGTAGAAATCTCTGATTCCGAGGATGAGCTCCCCCTTACTCATCGCAGCACCATACAGTCCACGGGGGTAGTCATCCGCGAACCCTCTGAAAAACCTCCGGCAACCCCCAGCAAGAAAAGGAAAGCACCCACCGCATCCAAAGATAAAGGAAAAGAAAAAGTGGGTGCAACCAAAGGCCACTCCGTCGCATTCTCCTCCACATGCATCAACAGCATCTACGAGTTGCGAGACATCCCAAACACAGAAGGGAATGCGCTCCTCGACTGCCTCGATGATGAGTTCCTGAGCGCAGTTCTTCTTGCGGTGGCTAGACCTGAGGCCAAATGGGATGGGCACGGAGCTGCGAGGACCCTCAAATCGCAACTGCTAGACTTTGAGCGACCTGCTGGATGCATTGAGTGA

Coding sequence (CDS)

ATGGAAATCGAGCAAATACTTATGGTCGAGCCCTCCATCTCCACAGAAAATCCTTCAGAGGTGCTCGATATTGCACCTCTGGACACCTCGACCTTCGTCATCCAACCCGTCAACCTTCAACCCACCCCAAATCTCCCCACCCCTCGAAACCTAACTCCATTTACATCGCCCTTCCCCTCTGTTCTTCCTCTTCTTCCACCACCCGATTGCTCAGCTTCACTCGCATCCGACTCTGTCCGTTTATCTTGTTTTCCTTCCGCAAGCATTTCCCATCCACCATCCACCTCAGCGCAACCCACTTCACCGCAGTTTTCTGAGCGGGAAGTGGCTACAGGAAACTCCCTGATGGAAGAATTAGGGGAGGAAGGTGGACTAGCGGCCAAGGAAAACGAGGGCTCTAGCAAGCAAGCGGAAGATCCGGTAGCCGTAGAAATTGCCGCAACCAACTTAGCAATCATTGCGACGACCATGGAAGTAGAAATCTCTGATTCCGAGGATGAGCTCCCCCTTACTCATCGCAGCACCATACAGTCCACGGGGGTAGTCATCCGCGAACCCTCTGAAAAACCTCCGGCAACCCCCAGCAAGAAAAGGAAAGCACCCACCGCATCCAAAGATAAAGGAAAAGAAAAAGTGGGTGCAACCAAAGGCCACTCCGTCGCATTCTCCTCCACATGCATCAACAGCATCTACGAGTTGCGAGACATCCCAAACACAGAAGGGAATGCGCTCCTCGACTGCCTCGATGATGAGTTCCTGAGCGCAGTTCTTCTTGCGGTGGCTAGACCTGAGGCCAAATGGGATGGGCACGGAGCTGCGAGGACCCTCAAATCGCAACTGCTAGACTTTGAGCGACCTGCTGGATGCATTGAGTGA

Protein sequence

MEIEQILMVEPSISTENPSEVLDIAPLDTSTFVIQPVNLQPTPNLPTPRNLTPFTSPFPSVLPLLPPPDCSASLASDSVRLSCFPSASISHPPSTSAQPTSPQFSEREVATGNSLMEELGEEGGLAAKENEGSSKQAEDPVAVEIAATNLAIIATTMEVEISDSEDELPLTHRSTIQSTGVVIREPSEKPPATPSKKRKAPTASKDKGKEKVGATKGHSVAFSSTCINSIYELRDIPNTEGNALLDCLDDEFLSAVLLAVARPEAKWDGHGAARTLKSQLLDFERPAGCIE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..214

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg028781.1Spg028781.1mRNA