Spg028681 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg028681
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionS1-like domain-containing protein
Locationscaffold7: 11193125 .. 11196535 (+)
RNA-Seq ExpressionSpg028681
SyntenySpg028681
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAACAAAATTCAAACCTTGAAGACTAAAATGTCAAGTTTGAAAATTCAGAGATCAAAATAAAATTTAACTCAATTATGAGAGACTAAAACTGAATTTTTCTCTAAAATTATTTAAAAAAAGAAAAGAGAGAAAAAAAAGAAAACCTAACTCTTTCTTCTTCCTCAGTTCCTCTCACTCTCACGTGCTCCACGTCCACGCCGTCTCCTCCTCCTCCGTTTCAGCAGCTCAGTGTCGCCGCCGCCTCTCTCCCGTTCGGCAGCCCCCCTCCTAGCGGTTTTTCACTGATTTCTGGTCTCATCTCGTTACTGGTACTCTCTCAATCTCCATCTATCTCTCTCTTCTCACTTGAAAAACACAAATTAGGACTTTCTAATGAAAGAATGGAGGAGTTGTTTGAATCTTTTCTTTTTAAATAACAATATCCGAATAGCAACCGGCAAATTGGGATGTGATGTGTGTTTGGCTGTTCTGATTCGGATTTTGATTTGTTGCTGCCAATTTGAGACTTTGATAATCGGTATATCCCTTTGGTCTCGGCTGAAAATTACCTTGTTTCTGCGACATGAAATTTCCAGCATCTTCCTTCGTCTTTGTTTATCAGAGAATCTCTCTTGCCCGCAGCTCTAATCTCTTTTCATTTCGTCGCTTAATAGAACCCTAGTTGAAGCCGAGTTAAGGACAGAGCATGAAGGGTGGAAGAAAGAACTTGCAGAGGGCATCAGAGCAGCATATTGTAAGCCTTGAAGATGGTCATAGCATTATGCAGGTTATCTCAATCCGTGGTTCCAATTTAATTGAGGTATCTTCCTCTTTCATCTCTGTACATTCTGATTTCTACTTCTTTGCTTACTCTTTCTCAAAGTTAATTATTTACTTTACAATCTACCGCTTCTGCTATTGCCTATTGCGTTGTATCAATCGACCTGAATTAGAAACTTCTCTAATTGCAGTTAATTATTGACCGATTCTTTGTTCTAAAAAATTAAGGCTGGTTTGATAACCAGTTGGTTTTTAAAAATTTAGATAGATTATAAACCCTACTTCCACGTATAAGTTTCTTTGTTTTGTTATCTACTCATTCTCTTGGTTTTTTCAAATTTTTAGAACTAAAAAATTAGTTTTGAAAAACAAGTCAAGTTTTGGCTAAGAATTCAAACGTGTTCTTAACAAAAAAAAAAAAAAAATTGTAAGGGAACTGGGAGAAAGCAAGCATAATTTAAAAAAATCAAATGGTTATCAAATGGGGTCTAAAATGATAAGTTTTAACTTTTAACACGTTAGAATATGAGGTTGCATTGTGTGACATAGATATTTCCAAACTAGATATCAATTGTTCTGATACGAAAATCACACTTCTCTAGAAATTTATATCACTCATTCTGATTAAGCATTGGTATGGAAACCAATATTTGTGCAGTTTCTCAGTTTGTAAAGCAAATATTTGCCAATTATTATTATTATTATTTTTGTAGGAAACAGAGATATATTATTTGCCCATCATTTGAAATAGTTTGCTTTTGTATTTTGGAAAATCTCTGATGCAAATTGTATTCCTTCATCATCTCTAGGTAATGGATGCACAAGGTGAGAAATCGCTGGCATTATTTCCTGCCAAGTTTCAAAAGAGTATGTGGATAAAACGAGGTATGTTCTATACCCATGCTACTAAATTTTCCCATCACATTAAAGTTTCTTCTTTTAATTTCTGGAAAAAAGAAGAGATCCCTCTGCACATTTTCCCTTCTCTGTTAACTTCTGGAAACTATGCTATTTCAGTGTTCTTGGAATTCATAATCTGCAACAGTTGGCCTTTGGTTATGGCCATGTTCCTTTGACTTAGTAGCTTTGACCATATTCATTGAAACATAGAGATAGATCTAGATTGTTTTGGATAATTTGTTAGGATCCCAATCTTAAGAAAACATACTGAAATTGCATTACGATATAAAATATATGAAAGATAGATCACACTAGTAATAACTAATAGCCTTTCGAGAGGGCTATCTCCCCTCACAATCCACAATGGACTGATTTTCCAAAATTCTGTTTAACTTATGAACTTCCTAAATCCAACTATTTATAAACTAACCCACATACTAACAACGATTATGCCACAATTAATATTACCAGCGATTCTCTAACATAATTTTATATCCAGCCCTTACTGAATGCTTTTGAAGTATTGGAAAAAGGTATTTGAAAGAAGCGTTGTTTGCTTTGCCATCAATGCAGGGAGTTTTGTTGTAGTTGATGAAAGTGGAAAGAAGACTGCTCTTGAATCTGGAAGCAAGGTGGCATGTATTGTTTCTCGAGTTCTATATTTTGAACAAGTTTGCGAGCTTCAAAAATCCCCAGAATGGTATGTCATATCAAATTTCAACTTATTCATTAAAATGGTTTAGGCGTTGCTCAGTAAATTTAGGTTAATTCCATTAACTGAAGCATAGATTTATTTTCCCTCAAATACAAGTTTTCCCTTATGATCAATTATCAAACAGCTGTTTCATCGCAACTATTTAGAAGCATCAAAATGTTTTTAAGTTCCAAAGTGAGCATAGCTCATTTGTAATTGACATGTGCTCATTCCCTTGAGGTCGGAGGTTCAAATCCCCTAACCCCACCTTGTTGTACCAAAAAAAACTTTGTTTTTAACTCGAATATTTATAACTGTTGGGGAAAAAGTGAAGCAGATGGCAAATTTAGATCATTGAAATTGGACAAAGATAAACAACTAAACATGAATGCAACACTTCAATTTCTATTGTATCATGCATGAGAAAGATAGCTTGTTGGTATCTCCTGTTTCTAGTGCTCGTCGTTGTGTCAATGCTTCTTTCTACTATGAGTGCAGCTGAAACTGAAAAAACTGACTAGTTCGATCAATTTTAACTATCTTTGTTTGATGATTTGGTTTTCTAAAGTATGAAACTAAGGACAATAGTTAGTTTGACGGCCTTCTTTTTTCCCTTACACTGATAGATCAATTTGATGTCGGACTTAACTGATTCACTTACCTCCCTTTATTCTACAATGTATTGCAGGCCAGAAGTCTTCAAGAATGCGATCATGGTTGATCGGAACGAAAATCTTCAGGCACAGAATAATCAACCAGAAGAGGAGGAGGTCGACTCGAGTGAAGATGATGGTCTTCCTCCTCTAGAAGCTAACACAAACAGAACTAAGCCATTAATATTACAACCAGATGCAGAATCAGAATCTGATTCAGATTCTTAACTTGTAAAATAATTTGAAGTTCATAATTTTGATTTGATACTAAATTTTTATGAATGTTCATTTTTTATCGTGTTTGTAATTAATAGAAATTTTAGACTACCTATTTTTGAATTTGGTATAATGTGTAATGTATGTGCTTACAATATCGAAGGCAAAAAATAGACGAATAAAATTT

mRNA sequence

ATGAAGGGTGGAAGAAAGAACTTGCAGAGGGCATCAGAGCAGCATATTGTAAGCCTTGAAGATGGTCATAGCATTATGCAGGTTATCTCAATCCGTGGTTCCAATTTAATTGAGGTAATGGATGCACAAGGTGAGAAATCGCTGGCATTATTTCCTGCCAAGTTTCAAAAGAGTATGTGGATAAAACGAGGGAGTTTTGTTGTAGTTGATGAAAGTGGAAAGAAGACTGCTCTTGAATCTGGAAGCAAGGTGGCATGTATTGTTTCTCGAGTTCTATATTTTGAACAAGTTTGCGAGCTTCAAAAATCCCCAGAATGGCCAGAAGTCTTCAAGAATGCGATCATGGTTGATCGGAACGAAAATCTTCAGGCACAGAATAATCAACCAGAAGAGGAGGAGGTCGACTCGAGTGAAGATGATGGTCTTCCTCCTCTAGAAGCTAACACAAACAGAACTAAGCCATTAATATTACAACCAGATGCAGAATCAGAATCTGATTCAGATTCTTAA

Coding sequence (CDS)

ATGAAGGGTGGAAGAAAGAACTTGCAGAGGGCATCAGAGCAGCATATTGTAAGCCTTGAAGATGGTCATAGCATTATGCAGGTTATCTCAATCCGTGGTTCCAATTTAATTGAGGTAATGGATGCACAAGGTGAGAAATCGCTGGCATTATTTCCTGCCAAGTTTCAAAAGAGTATGTGGATAAAACGAGGGAGTTTTGTTGTAGTTGATGAAAGTGGAAAGAAGACTGCTCTTGAATCTGGAAGCAAGGTGGCATGTATTGTTTCTCGAGTTCTATATTTTGAACAAGTTTGCGAGCTTCAAAAATCCCCAGAATGGCCAGAAGTCTTCAAGAATGCGATCATGGTTGATCGGAACGAAAATCTTCAGGCACAGAATAATCAACCAGAAGAGGAGGAGGTCGACTCGAGTGAAGATGATGGTCTTCCTCCTCTAGAAGCTAACACAAACAGAACTAAGCCATTAATATTACAACCAGATGCAGAATCAGAATCTGATTCAGATTCTTAA

Protein sequence

MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVCELQKSPEWPEVFKNAIMVDRNENLQAQNNQPEEEEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS
Homology
[Close]
BLAST of Spg028681 vs. NCBI nr
Match: XP_004146450.1 (probable RNA-binding protein EIF1AD [Cucumis sativus] >KGN50715.1 hypothetical protein Csa_005860 [Cucumis sativus])

HSP 1 Score: 303.1 bits (775), Expect = 1.5e-78
Identity = 155/169 (91.72%), Postives = 162/169 (95.86%), Query Frame = 0 

Query: 1   MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRASE HI SLEDGHSIMQV+SIRGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEHHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVCELQKSPEWPEVFKNAIMVDRNE 120
           IKRGSFVVVDESGKK ALESGSKVACIVSRVLYFEQ+ ELQKSPEWPE+FKNAI+ DRNE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQIRELQKSPEWPEIFKNAIVGDRNE 120

Query: 121 NLQAQNNQPEEEEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS 170
           NLQAQNNQP E+EV+SS+DDGLPPLEANTNR KPLILQPDAESESDSDS
Sbjct: 121 NLQAQNNQPGEDEVNSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 169

[Close]
BLAST of Spg028681 vs. NCBI nr
Match: XP_038891512.1 (probable RNA-binding protein EIF1AD isoform X1 [Benincasa hispida])

HSP 1 Score: 300.4 bits (768), Expect = 9.5e-78
Identity = 156/172 (90.70%), Postives = 164/172 (95.35%), Query Frame = 0 

Query: 1   MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRASEQHI S+EDGHSIMQV+SIRGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEQHISSIEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVCELQKSPEWPEVFKNAIMVDRNE 120
           IKRGSFVVVDESGKK ALESGSKVACIVSRVLYFEQV ELQKSPEWPE+FKNAI+ D+NE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAIVGDQNE 120

Query: 121 NLQAQNNQPEEE---EVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS 170
           NLQAQNN+PEE+   EVDSS+DDGLPPLEANTNRTKPLILQPD ESESDSDS
Sbjct: 121 NLQAQNNRPEEDEVTEVDSSDDDGLPPLEANTNRTKPLILQPDTESESDSDS 172

[Close]
BLAST of Spg028681 vs. NCBI nr
Match: XP_023547328.1 (probable RNA-binding protein EIF1AD [Cucurbita pepo subsp. pepo] >KAG7031527.1 putative RNA-binding protein EIF1AD [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295.0 bits (754), Expect = 4.0e-76
Identity = 150/169 (88.76%), Postives = 160/169 (94.67%), Query Frame = 0 

Query: 1   MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRAS QHIV LEDGHSIMQV+SIRGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASNQHIVGLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVCELQKSPEWPEVFKNAIMVDRNE 120
           IKRGSFVVVDESGKK ALESGSKVACIVSRVLYFEQV ELQKSPEWPE+FKNAI  D+NE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAITGDQNE 120

Query: 121 NLQAQNNQPEEEEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS 170
           NLQA+NN+ EE+E+DSS+DDGLPPLEANTNR KPLILQP+ E+ESDSDS
Sbjct: 121 NLQAENNRQEEDEIDSSDDDGLPPLEANTNRAKPLILQPEEETESDSDS 169

[Close]
BLAST of Spg028681 vs. NCBI nr
Match: XP_022991942.1 (probable RNA-binding protein EIF1AD [Cucurbita maxima])

HSP 1 Score: 294.7 bits (753), Expect = 5.2e-76
Identity = 149/169 (88.17%), Postives = 160/169 (94.67%), Query Frame = 0 

Query: 1   MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRAS QHIV LEDGHSIMQV+S+RGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASNQHIVGLEDGHSIMQVVSVRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVCELQKSPEWPEVFKNAIMVDRNE 120
           IKRGSFVVVDESGKK ALESGSKVACIVSRVLYFEQV ELQKSPEWPE+FKNAI  D+NE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAITGDQNE 120

Query: 121 NLQAQNNQPEEEEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS 170
           NLQA+NN+ EE+E+DSS+DDGLPPLEANTNR KPLILQP+ E+ESDSDS
Sbjct: 121 NLQAENNRQEEDEIDSSDDDGLPPLEANTNRAKPLILQPEEETESDSDS 169

[Close]
BLAST of Spg028681 vs. NCBI nr
Match: XP_022942753.1 (probable RNA-binding protein EIF1AD [Cucurbita moschata])

HSP 1 Score: 292.4 bits (747), Expect = 2.6e-75
Identity = 148/169 (87.57%), Postives = 159/169 (94.08%), Query Frame = 0 

Query: 1   MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRAS QHIV LEDGHSIMQV+SIRGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASNQHIVGLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVCELQKSPEWPEVFKNAIMVDRNE 120
           IKRGSFVVVDESGKK ALESGSKVACIVSRVLYFEQV +LQKSPEWPE+FKNAI  D+NE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRQLQKSPEWPEIFKNAITGDQNE 120

Query: 121 NLQAQNNQPEEEEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS 170
           NLQ +NN+ EE+E+DSS+DDGLPPLEANTNR KPLILQP+ E+ESDSDS
Sbjct: 121 NLQTENNRQEEDEIDSSDDDGLPPLEANTNRAKPLILQPEEETESDSDS 169

[Close]
BLAST of Spg028681 vs. ExPASy Swiss-Prot
Match: Q7SY07 (Probable RNA-binding protein EIF1AD OS=Danio rerio OX=7955 GN=eif1ad PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.4e-17
Identity = 59/166 (35.54%), Postives = 92/166 (55.42%), Query Frame = 0 

Query: 5   RKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRG 64
           RK++ +   +  V+  +   IM+V+   G+NL E +   GE+ L   P KF+K++WIKRG
Sbjct: 7   RKHVVKEVLEDYVTPTEDQQIMRVLGSNGNNLHEAVTGSGERFLLSMPTKFRKNIWIKRG 66

Query: 65  SFVVVDESGKKTALESGSKVACIVSRVLYFEQVCELQKSPEWPEVF-KNAIMVDRNENLQ 124
            FV+VD       ++ G KV   +S +LY + +  L+K   WPE F ++    +RNE  Q
Sbjct: 67  DFVIVD------PIKEGGKVKGEISFILYRDHIQHLRKLGVWPEGFQEDRTSGERNEGTQ 126

Query: 125 AQ-NNQPEEEEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSD 169
            + + + EEEE DS  +D    L  NTNR    +L  ++E E+D D
Sbjct: 127 KERSEEKEEEEGDSESEDDDSDLFVNTNRA--TVLYSESEEETDED 164

[Close]
BLAST of Spg028681 vs. ExPASy Swiss-Prot
Match: Q8N9N8 (Probable RNA-binding protein EIF1AD OS=Homo sapiens OX=9606 GN=EIF1AD PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.3e-16
Identity = 60/155 (38.71%), Postives = 81/155 (52.26%), Query Frame = 0 

Query: 14  QHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRGSFVVVDESG 73
           +HIV   D   I++V+   G+NL EV  AQG++ L   P+K++K++WIKRG F++VD   
Sbjct: 17  EHIVP-SDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD--- 76

Query: 74  KKTALESGSKVACIVSRVLYFEQVCELQKSPEWPEVFKNAIMVDRNENLQAQNNQPEEE- 133
               +E G KV   +S VL  + V  LQK   WPE F        N N Q Q   P E  
Sbjct: 77  ---PIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAFSEVAEKHNNRNRQTQPELPAEPQ 136

Query: 134 ---EVDSSEDDGLPPLEANTNRTKPLILQPDAESE 165
              E  SSEDD    L  NTNR +    + ++E E
Sbjct: 137 LSGEESSSEDDS--DLFVNTNRRQYHESEEESEEE 162

[Close]
BLAST of Spg028681 vs. ExPASy Swiss-Prot
Match: Q4R354 (Probable RNA-binding protein EIF1AD OS=Macaca fascicularis OX=9541 GN=EIF1AD PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.3e-16
Identity = 60/155 (38.71%), Postives = 81/155 (52.26%), Query Frame = 0 

Query: 14  QHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRGSFVVVDESG 73
           +HIV   D   I++V+   G+NL EV  AQG++ L   P+K++K++WIKRG F++VD   
Sbjct: 17  EHIVP-SDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD--- 76

Query: 74  KKTALESGSKVACIVSRVLYFEQVCELQKSPEWPEVFKNAIMVDRNENLQAQNNQPEEE- 133
               +E G KV   +S VL  + V  LQK   WPE F        N N Q Q   P E  
Sbjct: 77  ---PIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAFSEVAEKHNNRNRQTQPELPAEPQ 136

Query: 134 ---EVDSSEDDGLPPLEANTNRTKPLILQPDAESE 165
              E  SSEDD    L  NTNR +    + ++E E
Sbjct: 137 LSGEESSSEDDS--DLFVNTNRRQYHESEEESEEE 162

[Close]
BLAST of Spg028681 vs. ExPASy Swiss-Prot
Match: Q58CY2 (Probable RNA-binding protein EIF1AD OS=Bos taurus OX=9913 GN=EIF1AD PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.4e-15
Identity = 60/156 (38.46%), Postives = 83/156 (53.21%), Query Frame = 0 

Query: 14  QHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRGSFVVVDESG 73
           +H+V   D   I++V+   G+NL EV  AQG++ L   P+K++K++WIKRG F++VD   
Sbjct: 17  EHMVP-SDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD--- 76

Query: 74  KKTALESGSKVACIVSRVLYFEQVCELQKSPEWPEVFKNAIMVDRNE-NLQAQNNQPEEE 133
               +E G KV   +S VL  + V  LQK   WPE F      D N+ N Q Q   P E 
Sbjct: 77  ---PIEEGEKVKAEISFVLCKDHVRSLQKDGHWPEAFSQVTEKDNNDRNRQTQPELPAEP 136

Query: 134 ----EVDSSEDDGLPPLEANTNRTKPLILQPDAESE 165
               E  SSEDD    L  NTNR +    + ++E E
Sbjct: 137 QSSGEESSSEDDS--DLFVNTNRRQYHESEEESEEE 163

[Close]
BLAST of Spg028681 vs. ExPASy Swiss-Prot
Match: Q5RD29 (Probable RNA-binding protein EIF1AD OS=Pongo abelii OX=9601 GN=EIF1AD PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.1e-15
Identity = 61/156 (39.10%), Postives = 83/156 (53.21%), Query Frame = 0 

Query: 14  QHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMWIKRGSFVVVDESG 73
           +HIV   D   I++V+   G+NL EV  AQG++ L   P+K++K++WIKRG F++VD   
Sbjct: 17  EHIVP-SDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVD--- 76

Query: 74  KKTALESGSKVACIVSRVLYFEQVCELQKSPEWPEVFKN-AIMVDRNENLQAQNNQPEEE 133
               +E G KV   +S VL  + V  LQK   WPE F   A   + N N Q Q   P E 
Sbjct: 77  ---PIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAFSEVAEKHNNNRNRQTQPELPAEP 136

Query: 134 ----EVDSSEDDGLPPLEANTNRTKPLILQPDAESE 165
               E  SSEDD    L  NTNR +    + ++E E
Sbjct: 137 QLSGEESSSEDDS--DLFVNTNRRQYRESEEESEEE 163

[Close]
BLAST of Spg028681 vs. ExPASy TrEMBL
Match: A0A0A0KM30 (S1-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G218810 PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.1e-79
Identity = 155/169 (91.72%), Postives = 162/169 (95.86%), Query Frame = 0 

Query: 1   MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRASE HI SLEDGHSIMQV+SIRGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEHHIASLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVCELQKSPEWPEVFKNAIMVDRNE 120
           IKRGSFVVVDESGKK ALESGSKVACIVSRVLYFEQ+ ELQKSPEWPE+FKNAI+ DRNE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQIRELQKSPEWPEIFKNAIVGDRNE 120

Query: 121 NLQAQNNQPEEEEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS 170
           NLQAQNNQP E+EV+SS+DDGLPPLEANTNR KPLILQPDAESESDSDS
Sbjct: 121 NLQAQNNQPGEDEVNSSDDDGLPPLEANTNRAKPLILQPDAESESDSDS 169

[Close]
BLAST of Spg028681 vs. ExPASy TrEMBL
Match: A0A6J1JNB5 (probable RNA-binding protein EIF1AD OS=Cucurbita maxima OX=3661 GN=LOC111488431 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.5e-76
Identity = 149/169 (88.17%), Postives = 160/169 (94.67%), Query Frame = 0 

Query: 1   MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRAS QHIV LEDGHSIMQV+S+RGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASNQHIVGLEDGHSIMQVVSVRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVCELQKSPEWPEVFKNAIMVDRNE 120
           IKRGSFVVVDESGKK ALESGSKVACIVSRVLYFEQV ELQKSPEWPE+FKNAI  D+NE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPEWPEIFKNAITGDQNE 120

Query: 121 NLQAQNNQPEEEEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS 170
           NLQA+NN+ EE+E+DSS+DDGLPPLEANTNR KPLILQP+ E+ESDSDS
Sbjct: 121 NLQAENNRQEEDEIDSSDDDGLPPLEANTNRAKPLILQPEEETESDSDS 169

[Close]
BLAST of Spg028681 vs. ExPASy TrEMBL
Match: A0A6J1FVM0 (probable RNA-binding protein EIF1AD OS=Cucurbita moschata OX=3662 GN=LOC111447695 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.3e-75
Identity = 148/169 (87.57%), Postives = 159/169 (94.08%), Query Frame = 0 

Query: 1   MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRAS QHIV LEDGHSIMQV+SIRGSNLIEVMDAQGEKSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASNQHIVGLEDGHSIMQVVSIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVCELQKSPEWPEVFKNAIMVDRNE 120
           IKRGSFVVVDESGKK ALESGSKVACIVSRVLYFEQV +LQKSPEWPE+FKNAI  D+NE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRQLQKSPEWPEIFKNAITGDQNE 120

Query: 121 NLQAQNNQPEEEEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS 170
           NLQ +NN+ EE+E+DSS+DDGLPPLEANTNR KPLILQP+ E+ESDSDS
Sbjct: 121 NLQTENNRQEEDEIDSSDDDGLPPLEANTNRAKPLILQPEEETESDSDS 169

[Close]
BLAST of Spg028681 vs. ExPASy TrEMBL
Match: A0A1S3C3W3 (probable RNA-binding protein EIF1AD OS=Cucumis melo OX=3656 GN=LOC103496721 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.6e-75
Identity = 151/169 (89.35%), Postives = 158/169 (93.49%), Query Frame = 0 

Query: 1   MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRASE HI SLEDGHSIM V+SIRGSNLIEVMDAQG KSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEHHIASLEDGHSIMLVVSIRGSNLIEVMDAQGGKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVCELQKSPEWPEVFKNAIMVDRNE 120
           IKRGSFVVVDESGKK ALESGSKVACIVSRVLYFEQV ELQKSP WPE+FKNAI+ DRNE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPGWPEIFKNAIVGDRNE 120

Query: 121 NLQAQNNQPEEEEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS 170
           NL+AQNNQ EE+EV+SS+DDGLPPLEANTNR KPLILQPD ESESDSDS
Sbjct: 121 NLRAQNNQSEEDEVNSSDDDGLPPLEANTNRAKPLILQPDGESESDSDS 169

[Close]
BLAST of Spg028681 vs. ExPASy TrEMBL
Match: A0A5D3DQ84 (Putative RNA-binding protein EIF1AD OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00330 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.6e-75
Identity = 151/169 (89.35%), Postives = 158/169 (93.49%), Query Frame = 0 

Query: 1   MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           MKGGRKNLQRASE HI SLEDGHSIM V+SIRGSNLIEVMDAQG KSLALFPAKFQKSMW
Sbjct: 1   MKGGRKNLQRASEHHIASLEDGHSIMLVVSIRGSNLIEVMDAQGGKSLALFPAKFQKSMW 60

Query: 61  IKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVCELQKSPEWPEVFKNAIMVDRNE 120
           IKRGSFVVVDESGKK ALESGSKVACIVSRVLYFEQV ELQKSP WPE+FKNAI+ DRNE
Sbjct: 61  IKRGSFVVVDESGKKNALESGSKVACIVSRVLYFEQVRELQKSPGWPEIFKNAIVGDRNE 120

Query: 121 NLQAQNNQPEEEEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS 170
           NL+AQNNQ EE+EV+SS+DDGLPPLEANTNR KPLILQPD ESESDSDS
Sbjct: 121 NLRAQNNQSEEDEVNSSDDDGLPPLEANTNRAKPLILQPDGESESDSDS 169

[Close]
BLAST of Spg028681 vs. TAIR 10
Match: AT2G40780.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 182.6 bits (462), Expect = 2.7e-46
Identity = 93/169 (55.03%), Postives = 128/169 (75.74%), Query Frame = 0 

Query: 1   MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSMW 60
           M  GR+NL++A+     +LE+  SI QV+S+RGSN IE+MDA+GE SLALFPAKF++SMW
Sbjct: 1   MNRGRRNLKQAASDQDFTLEECQSIAQVVSLRGSNQIEIMDAKGENSLALFPAKFRESMW 60

Query: 61  IKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVCELQKSPEWPEVFKNAIMVDRNE 120
           I+RGSFVV+D +GK+ A ESGSKV  IV +VL+FEQV  LQKSPEWPE+FK+   +   +
Sbjct: 61  IRRGSFVVIDHTGKEKAQESGSKVTSIVCKVLFFEQVRLLQKSPEWPEIFKDTRPIPAEK 120

Query: 121 NLQAQNNQPEEEEVDSSEDDGLPPLEANTNRTKPLILQPDAESESDSDS 170
           +   + ++ + E   S +DDG+PPL+ANTNR +P  ++ DAE++S SDS
Sbjct: 121 SSPIEQHEDDGEVDSSDDDDGMPPLQANTNRLRPFGVKCDAETDSGSDS 169

[Close]
BLAST of Spg028681 vs. TAIR 10
Match: AT2G40780.2 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 147.5 bits (371), Expect = 9.6e-36
Identity = 74/130 (56.92%), Postives = 100/130 (76.92%), Query Frame = 0 

Query: 40  MDAQGEKSLALFPAKFQKSMWIKRGSFVVVDESGKKTALESGSKVACIVSRVLYFEQVCE 99
           MDA+GE SLALFPAKF++SMWI+RGSFVV+D +GK+ A ESGSKV  IV +VL+FEQV  
Sbjct: 1   MDAKGENSLALFPAKFRESMWIRRGSFVVIDHTGKEKAQESGSKVTSIVCKVLFFEQVRL 60

Query: 100 LQKSPEWPEVFKNAIMVDRNENLQAQNNQPEEEEVDSSEDDGLPPLEANTNRTKPLILQP 159
           LQKSPEWPE+FK+   +   ++   + ++ + E   S +DDG+PPL+ANTNR +P  ++ 
Sbjct: 61  LQKSPEWPEIFKDTRPIPAEKSSPIEQHEDDGEVDSSDDDDGMPPLQANTNRLRPFGVKC 120

Query: 160 DAESESDSDS 170
           DAE++S SDS
Sbjct: 121 DAETDSGSDS 130

[Close]
BLAST of Spg028681 vs. TAIR 10
Match: AT2G40910.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 45.4 bits (106), Expect = 5.1e-05
Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 0 

Query: 1  MKGGRKNLQRASEQHIVSLEDGHSIMQVISIRGSNLIEVMDAQGEKSLALFPAKFQKSM 60
          MK  R++L++A+E      E+  S+ QV+S+R S+ +++MD +G+ SLAL PAK    M
Sbjct: 1  MKRRRRDLKQAAES---EQEECQSVPQVVSLRDSDQLQIMDEKGDNSLALLPAKLPMRM 56

The following BLAST results are available for this feature:
BLAST of Spg028681 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146450.11.5e-7891.72probable RNA-binding protein EIF1AD [Cucumis sativus] >KGN50715.1 hypothetical p... [more]
XP_038891512.19.5e-7890.70probable RNA-binding protein EIF1AD isoform X1 [Benincasa hispida][more]
XP_023547328.14.0e-7688.76probable RNA-binding protein EIF1AD [Cucurbita pepo subsp. pepo] >KAG7031527.1 p... [more]
XP_022991942.15.2e-7688.17probable RNA-binding protein EIF1AD [Cucurbita maxima][more]
XP_022942753.12.6e-7587.57probable RNA-binding protein EIF1AD [Cucurbita moschata][more]
BLAST of Spg028681 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q7SY074.4e-1735.54Probable RNA-binding protein EIF1AD OS=Danio rerio OX=7955 GN=eif1ad PE=2 SV=1[more]
Q8N9N86.3e-1638.71Probable RNA-binding protein EIF1AD OS=Homo sapiens OX=9606 GN=EIF1AD PE=1 SV=1[more]
Q4R3546.3e-1638.71Probable RNA-binding protein EIF1AD OS=Macaca fascicularis OX=9541 GN=EIF1AD PE=... [more]
Q58CY21.4e-1538.46Probable RNA-binding protein EIF1AD OS=Bos taurus OX=9913 GN=EIF1AD PE=2 SV=1[more]
Q5RD294.1e-1539.10Probable RNA-binding protein EIF1AD OS=Pongo abelii OX=9601 GN=EIF1AD PE=2 SV=1[more]
BLAST of Spg028681 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KM307.1e-7991.72S1-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G218810 PE=... [more]
A0A6J1JNB52.5e-7688.17probable RNA-binding protein EIF1AD OS=Cucurbita maxima OX=3661 GN=LOC111488431 ... [more]
A0A6J1FVM01.3e-7587.57probable RNA-binding protein EIF1AD OS=Cucurbita moschata OX=3662 GN=LOC11144769... [more]
A0A1S3C3W31.6e-7589.35probable RNA-binding protein EIF1AD OS=Cucumis melo OX=3656 GN=LOC103496721 PE=3... [more]
A0A5D3DQ841.6e-7589.35Putative RNA-binding protein EIF1AD OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
BLAST of Spg028681 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G40780.12.7e-4655.03Nucleic acid-binding, OB-fold-like protein [more]
AT2G40780.29.6e-3656.92Nucleic acid-binding, OB-fold-like protein [more]
AT2G40910.15.1e-0540.68F-box and associated interaction domains-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001253Translation initiation factor 1A (eIF-1A)SMARTSM00652eIF1neu4coord: 18..107
e-value: 2.4E-26
score: 103.5
NoneNo IPR availableGENE3D2.40.50.140coord: 1..141
e-value: 2.7E-27
score: 96.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..169
IPR006196RNA-binding domain, S1, IF1 typePFAMPF01176eIF-1acoord: 23..72
e-value: 2.0E-10
score: 40.3
IPR006196RNA-binding domain, S1, IF1 typePROSITEPS50832S1_IF1_TYPEcoord: 12..92
score: 9.581142
IPR039294Probable RNA-binding protein EIF1ADPANTHERPTHR21641TRANSLATION INITIATION FACTOR-RELATEDcoord: 1..168
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 13..139

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg028681.1Spg028681.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006413 translational initiation
cellular_component GO:0005634 nucleus
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003723 RNA binding