Spg028628 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg028628
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RING finger and transmembrane domain-containing protein 2-like
Location	scaffold7: 11831183 .. 11839747 (+)
RNA-Seq Expression	Spg028628
Synteny	Spg028628

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAACACTTCAACGGTCAGCTTCAAGAGGGTGAGGCCATGAGCTGAATTAGTCATATTTTTGTGCCTAATACGACTCGCCTTCCACGCGCACTCCTTTCCCCTCCACTACTTGCTTCTCTCTACGTTTCATTTTCCATTCAATTCTCCATTTTTTTCCTCACCCATTTCTTCATTTCCTTTTTCCCTTCCCCAAATCCCACCGGCGACCCTCCGGCCCATCTCCCTCCGCCGCTTTCCGACCGAATCACCGCCGTTTCCGGCTCCAAAGGCCCCCTTTCTTGTTGCCCATCATCCTAATTTTTGTTTTCAGGTGGTGGGATTTCGAGGGGTCCAATCGGTGCAGGTTTTGCAAGGGAGGGGGAAGGTCGAAGATTAGGGCTTTTGGTCACTGGCCATGGAGACCTCGGCTTCCAATTCTGATCCTTACTCCAATTCTTCTTCACCCACAACTGCTCGCAGCTCCTCCAGATTTGGGGTCTCGATCCCTTCGCTGAATTTCTTCCGTTCGCCTTTGTCCGTCATTTTGGATTACTCGGGAATTCTCCCCACTAGGGCTGTTCGTCATGAATCTGAGCCTGTAATCAACGGCTCTGCCACTCCTGATTTGCGGGTTTATTCTCAAAATCAGAATCACTTGATGATCACTTCTTCCTCTTCCTTGTCTTCGTCTTCTTCTTCTCCTGCCACCACCTCTTCCTCCGGTAATTCCAGCCCCACTGGGGAGGTTTCGATTAGGATTATTGGGTCTGGTGAGCAAGATCCTTCTCCTAGTGGGTTGTTGCCAAATCAGGCTCTGGTTGGACAAGCTGGTTACGAGCAAAATGGCGGACTTCCTGTTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCTTTGGTGTCCACCCCTTCTTCATCTATTCAATCTGGAAGCAGTCGAGTCGATGGAGAATCTGGAAATGGCGTGGAAGAGAATGTTAATAGAGATTCGTCTTATCAGAGATACGATATTCAGCAGGTTGCCAGATGGATTGAACAAATTCTTCCATTCTCTTTGCTATTGCTGATAGTCTTTATCCGTCAGCATTTAGAAGGTGCTTTCTTTTGTCTCTCTCTTGTTAGACTGATAATAGTTTCGAATTTCATTGCCTTTTACATTTGGGCAACGCTTTGACAGATTATACATTTTCAGTATCAATTTTCCTACGAGTGTTTGCTCTGGGGTAATAGCCAATAGAGTATTTACAACCAACTTGGTAGTTACTAGTCCTTGTTAAGATATAACTAAGTGAGAATGCTGGGCATTCTTTACTTAGGACTTCCGTTGGATCTATTAAAATTTCTCTCTCGTTAGTCCCTGTGCTTTCTAGCTTACTTACAGCTTGATTGTGGAGGATAAGGTTTGGTTTGAATATTGATGTGTTGTGGTAAATTGTGCTGCATGTGTTACTCGATTATGAAATTGCATTGCTAGCTGCTGTAATGTATTGCAGGGTTTCTTGTAAGGTGTTTGTAAGAAGTAGTGATAAAATCATCCAAGAATTTAGAGATCAGAGTTTTTAATAGCGTTGGAACTATCTTACTGTCAAAATTTTATAATTTATTTTAGATGAAGAAAAATAATTGGATAAACAATGTTGATAAATTGGCTTCTACTACCAGCACATGTTTTCATGTATTGGAAAATCAAATATGATTTGGAAGGAAACTCAGGGGAGTGGGGAAGGTGTTAAGAAAGAAGCTGAGGAACACTGTGGCAACAGTATGGTAGTATCAGATCATTTGGTTTGGAGATGTCACTTTGCCATAAAACTTTGAAACACATTTTTGCACATGTTTGTTTGGTAGTGGACATATGCATTAATTATCTTTCATAACCTAACCAAAGGGAGTTACAGTACTCCACTATTGGGTGTAATCAGAAGACAATTAGATGCCATTTTATGTATTATTTTATTGTCTTCTGCCTTTTGCTCTCTTGCTGTAACATTTTTATGATTAGTGAGAAATTGTTTCTTTGATATTTCCAGGTTTTTTCATCACAATTTGGATATCAGCTGTTATGTACAAGTCAAACGATATTGTCAAGAAACAGACTGCTCTAAAGGTGGCATAAACCTAAACCTAGACTTTAACTTATCTATGAGTACTTTATTTCTTTTTCAACTTCATTGAGAACCCACTTGCAAGCAATATTTACTGAGAATTTATTCTCTTTTTTAGGGAGAGAGGAAAATTTCTGTCCTTGCTGGTACTTCTATTGCATTTTTGGTTCATGTAATTGGGATTTACTGGTGGTGTCACAGTGATGATCTTCTGTACCCGTTAATCATGCTTCCACCAAAGACAGTACCACCTTTTTGGCATGCCTTGTTCATCATTTTGGTTAATGGTACAGATTTTCCCCTGCTTTAGCTTATAAAGTATCTGTAGATATAGTGATTGAATTGACCTATGGAATGGAGCTTTGGAAGGTGTATGTAGAAATTATCCTTGACCTATTATGTGCTATTTCTAATTAGTTAGTCTGAATGGTGATATTACATGGACATAAGATGGTTTATTATCTTTATGCAATCAATTTGGATCTTGTAAACATAGTTTCTAAGATAGGAACCAGGAGAATTTTTTTTTTATGGTTCAAGCTTCTTATTCTGACTTCTTTGTTGTATTTGTCTCACAATTTTCTGTGCAGTTTTTCATACATTCATGATTCAATTTTAATATACTTATTACTCTTTTTGGCTTTGATTTTGGACCATATTGTGTTGTCAGATACAATGGTGAGGCAGGTTGTAATGGCTCTCAAATGTTTTCTTCTTATTTACTACAAGAATGGTAGAGGTCATAATTTTCGCCGACAGGTACTATAAGATATCAAAATTAGCTTAATCATATGTTGTATGTCTATTTCATATTAACCATCAATATTATTGAAATATATATGTATATACTTTATTGCAGTTCTTTGATTGTTTATATAATTCATGTTTTAGGGTCAGATTTTAACTCTTGTGGAATACACTCTTCTGTTATACCGTGCATTATTACCCACACCTGTATGGTACCGGTTCTTCTTAAACAAAGATCAAGGGAGCCTTTTTTCATCACTGACAACAGGATTGTATTTAACTTTCAAGCTAACGTCTGTTGTTGAGAAGGTACGCTTTAAAACATGAATATTTATATCTTAAATCTGTACTAAAAAATTTAATATTATGTCATAGTTCTTGGAAACCAACTTGGTTCACATATTATCCTTTTCTTTCCTTTTTTCCCCCTTATTTTCTCTTTAGATTCAATCATTCGTTGCTGCATTTAAGGCTCTATCACGAAAAGAAGTCCATTATGGATCATATGCCACATCAGAACAGGCAAGTACTTTTATTCTGTCTGTTGTAGTCTGATTCGGCATTTACTTTTTTAAAAGAGCTTTGTGTTTCTCCTTGCAAATGACTTTACACAGCTGTTTTCTCATTCCATATAATATTTTCCTCAAATAACAAAAGGCCATAATTATTTGTAGAACCCTTTGAGATGATTGAATGTCTCCTTTAATGTCTTTTTTAATGTTTTCTTAATGTTACAAGTCATCCCATCTTTTAACTCTTGTTGAGGGGATTCCCTTGTTACCTTCTCATGAATTTGTGATAGTATTATTAGCCTGTTGGATATGGTGGGAGAATGATCAAGGTTTTCTTTTAGGTAAATTAAACCGATGTCCCCCTATCTCTTCATTGGTGTGGGAACTCAACTTTTTTACCGTCTAAAGTTACATGATTGACTCTTCACATGATCACATCTAACTATATAACATATATATGACTCTTTGGGCCTTCTTGATTAATTCAACTTACCATATGCAACATTCGTGGACAGAGCAATGATTTGGTATTTATGCATTTCTAGTTGTATTGGAGAAGGAAGTAACACACTAATATATCCTGTTTAATATTTGTTCTAGGACTTATCTCATGTATTTGGGAGCTTATTTACTAGTGTGCGAAGGTGTATTCTTAGCAGTGCTAGGAAGATCTATGCATGTTAGGTTGGATTGTTAAAAATTGATTATAGACAGGGTGTCATGTATTTGATTGTTCAAGTTACTAGTTTTTAGTACCTATAGAACTTATATTGATCATTCTAAATGTAATTTATTTATTTATTTATTTTTGCTACTTTCCCTTTATAATTCTTGCTAATTGTAGTGACTCTTTTTAAATATCTTTTGTCCTTCATTTGGAAGAGTATATTTCTTGATTTTTTATTTGTTAATCAAAATTTAGTTTTTTATCTTAAAAAATTGCATTTCCAATGTAAGTTTTGGGGTACATGTAAAATTTGCTCTTTTCTTTTACTTCAATGTAGTTGCTTATATCTAATTATTGTTTCCTTTTTTAAAAAAAAGTAGTTGATTATATCAGGTTGCACATCATGAAATGCTTCTTTTGAGGTGTGTTATTTTCATTTTTTTTTACGACATCAAGAGATACAAAAAAGTCATTATCATGATTTGGCAATTGGCACTGATCATTGCCTGCGATGTCACCAATATTGAACCAGGAAAAGTTCTTGACTTTTGTTATGTACATGAGTGATTGAATGTTATGTCTCCATCCTGATAAATATCTATGTCCTATGATTTCAGCAGCATTCTTTGATCAAAGAATAGAAACTTCATACATTAATTCTATTCCATTATGTTTTCCATATACTTTGTTTTGTTCCATTGCAGGTAAATGCTGCGGGAGACCTTTGTGCTATTTGTCAGGAGAAGATGAATGCTCCAATCCTGTTACGTTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAATGGTCAGTATGATCTTCACTTCTCTTATGTTTTCTGGATACTACCTACGGTGCATTACTATTCATATCAGACTTCCATAGGACCAATATATAGATTGTAACTGGGAGGCAGCATTCTAATTTGAACTCTTGGGTACCATTAGTAATTATCAACCTTTTTATGAGCCAAAAAGTTCTTGCTCTTGGCTTGGAGAAAAACTGGAGTGCGAGTGTGCGACATTATGCCTCTCTTCGGTTTTGGGTTGAATGGCAAAGGAGGCAATAAATGTTGAAGACAGAGAAGTAGGAGGAATATTAGGACTGAGAAGGATAGGAGGGAGTGGGATTTTCTACATTAATAATATTAATGATAAAATTTAACCATCAAAACATGCAAGTAATATCTTGATTCAAAAAAGAAAACATGCAAATAATAATTAACAGTCTTTTTTGGGATGATTGTGGGTGTCCCTACGTGCAAAGTTCTCTCTTAACACATTTATATATCTCAAGTAGGTAGCGACACCTTAAGGTCAAATTTCCCTCGTTCTTTGGCTACAAGAAATTCTACTTTGAAAAGTCAAAAGTTAGATGTAAATGAAAAGTCTTTGGTTTCCTGTTAAAAATACTTCTCAAAATGAAAAAAAAAAAAAAACCAGCCTTTATCAGTCTGGGCAAATCAGTCATTTGCTTGGACTGGTTTTGTCATCGGAATGGGAGGGATTTAAATATCCTTGGTTATTCTTCAAAAAAAAAAAAAAATCTTGGTTAGATATGTTGAACCAATTCCCATGGGCCTCGGATATTCAGTTATCAACCTTTCCTACTTTCTAACAAATGGTAATTATATAATTTAACTAGTATGACCTGTGCCCCACATGAGCATAGCTCAACTGGCATATGATTTGTACTAATGACCAAGAGGTCTGTGGTTTGAATCCCCCTACTCCACATGTTGTCAAAAAAAAGGTATTTCTTTTCACTGTACGATTTTGTTTTATTAACTTGAAATAATGGTTTATACTATTAATGGCTAGTCCACGCTTTGTATATTTTCTCTCTGCCAAAATTTTGTACTTGTCCTCCCTTTTGTCAACCGTTGGGGTAGTGATACAGGGCAATGAAGAAATAAAATAAAACCAAGTTTCTAGTTTGTAGGATAGCAACTTGCATAATTGGTTTTTGAAAATCGATTCAAAGATTTAGTATTATGAGATTCATTCTTAAAGATTTAAAGTATCCTTCTGTTAGTTATTCAAACTAAGAAAACACCAAATACTATATATTGCAATATCAAAAGAAGTTACAATATAACCGATAGCCTTTCGAGAGGGCTAACCCTCTCCCAAAGCCTCACTATGAGACTACACTCAAAATTCTCCACACCTCTAAGGCTCCCTAACTTCCCTATTTATTATAACCAAGGCACAACCAAGGCTCCTTAGCTAATTACTATTATACTCTTACTACCCTTCTAATACTATTCCCCAATTATCCCTAATTAGTACTCTCACACCTTCCTGCAATTAAGATTAGGAAGCTCAAATGATAAGCTTAGTCCTAAACTTAAGATTCCTAAACTTTAAAAAGTGTCTATTAGGTCCTTGCCATATTTAAAACTTTTAAAAATTAACGAATGTATTAGATATAAAATTGGATTTTAAGTCTAATAAGGCCCTAAACTTTGAACTTTTTGCCTGGTAGGTTCATGAATTTTTAAAAAAGGTCAAATTCATTCCGAGCCTGTTAGACACAAAATTGAAAATTTAAGGACCTATTGGATACGAAATTGAATGTTTAAGGACGTATTAGACACTTTTTGGAGTTAAATGGATAGAAACTTGAAAGTTTAGGGACCTATTAGAACTTTTTTAAAGTTAATGGACTAAACTTGAAATTTAACGAGTTAGAAATGTAGTGCACAAAAAATTTGATTTTGTCCTTTGAAAGAGATTTACAAGTCTATTTGTGGACATTCAATAATTTTTAGATAATTCTAATCTCAAGCCTATTTGTGCCAAAGCGAGCATAGCTCAACGGTAATTGGCATGGACTCTCGACCAAGAATTTAGAGGTTCGAATCCCCTCACCCCCAGATGTTGTTGAACTAAAAAAAAAAAAAAGTATCAGGCATGAAAGTTTTGGTCAATTGTGAGGAGGACTCACCTCTTTATAATTATCTTTTAGGGCTTATTCTTTTAGATGGAAGTTTTCTTTTGAAATTAGTTCAGAGGTTTTGGTTTGACTCCTTCGGTAGGATTGTCGTTTTGTAGTCTCTTTTCTTTCATTTTTAAAGCTTGGTTATTCATTAAAAAAAAACAACCTTAACTAGAGGCTCTTTAGCAGTCTACCTTGGAAACAAACAACAAAATCTAGTTAAAGATGATGCTTTCTTGGAATGATAGCAGACTTGTCACTTATCTAAAACAAAATAAAAAAAAAATGTAAAATTCTTTAAATGGTGTACCAGGGATCCAGGAAGTAATTCAGTTAAAATTCTTTTAATGGAATAGAAAGCAGTGGTATGTTATTTTAAGAGTGTTTTGCAAATTCAAACACACCTGTTATGCTTCAAACATCACCGTTCCATCCTCATGTGTATCTTCTCAAGATCCCTTAGAACTCAACAACATAGTTATTAATATTAGAGGTGATTTTTTTTTCGATATCCGTGAGTGTCTGAGCCAACTTGCGTGCACCACGACTAATCTCACGGGACAACCGTCTGACCCTACTACATTTGGTTGCTAGAAAACACGGAGGATATTGAATTCTAGGTAGGTGGCCTTCATGGATTGAACTCATTCCTTTTAAGCCCTTTATTTTATTAATATTAGATGTCATTACAATATCGTAATATCATTCTTATTATTAGGGTTAGGGGATCGTCATAGCCTACTAGTATGGCTATGGCATTCACTACATGAACCTACCCGTACGCACAGAGGCGAAGGAACTAAAAGAATAAAAAAAATGAAGGGAACCCCTTGAATCTTGATTCATAATAGCATGATTCTTTTGACTGGACGTAATCCTGTAGGTATATTGGGAAGTAATTTTAGCTGCTACAAATGTCATTGCACTTCCATTTACTGGTTCTGAGTACTTGAGTTTTCAGGTTTGAAAGAGAAAGAACTTGCCCTCTTTGCCGGGCACTGGTAAAGCCCGCAGAACTTCGAACATTTGGCGATGGGTCGACCAGCTTACTCTTCCAGTTGTTTTAGAGGAAATTTTCCATTTCTCGACGTAACAGCTCTATCAGTTTAACAAAGAAAAATATCGTTTATCGGATGGAAACAGGGGGAAGAAAAAGAACAAAGAAAAAGGGAAAGAGAGAAGAAAAAAAAGGAAAAACAAAACATCCAGATGAGTTTAGATGTTGTCAAATTCAAAACTGGATTAGTATTATATTAATGCTTTGTAATCATTGTGACGAGTTAGATGTCCAAACAGAAGATGGATTTAATAAAATCCCATTTCTTCATCAATGAAATCAAATTTTTGAACAGCAAGAATTCCAGTGTGAAAAGTGCATGTTTATGAGGATTGATGAAGAATTAACTGTAATCTGTAGTAAAGATGATCACTCCCTGTAATTTCGGTCTGGAAAGAGCTGCCATGTGAATGTGATGGTCAGTGTGCAGTAGAAATGACAGTGATTTCTCTGTCAAATAATTGAAATACTGATTCTGAAGTTTTCTTTTTTGGTACTGTTATGAACTGTGAAGCAATGTGTATGAGCAAAGCAAAAGTATCGTCTGTGC

mRNA sequence

ATGGAGACCTCGGCTTCCAATTCTGATCCTTACTCCAATTCTTCTTCACCCACAACTGCTCGCAGCTCCTCCAGATTTGGGGTCTCGATCCCTTCGCTGAATTTCTTCCGTTCGCCTTTGTCCGTCATTTTGGATTACTCGGGAATTCTCCCCACTAGGGCTGTTCGTCATGAATCTGAGCCTGTAATCAACGGCTCTGCCACTCCTGATTTGCGGGTTTATTCTCAAAATCAGAATCACTTGATGATCACTTCTTCCTCTTCCTTGTCTTCGTCTTCTTCTTCTCCTGCCACCACCTCTTCCTCCGGTAATTCCAGCCCCACTGGGGAGGTTTCGATTAGGATTATTGGGTCTGGTGAGCAAGATCCTTCTCCTAGTGGGTTGTTGCCAAATCAGGCTCTGGTTGGACAAGCTGGTTACGAGCAAAATGGCGGACTTCCTGTTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCTTTGGTGTCCACCCCTTCTTCATCTATTCAATCTGGAAGCAGTCGAGTCGATGGAGAATCTGGAAATGGCGTGGAAGAGAATGTTAATAGAGATTCGTCTTATCAGAGATACGATATTCAGCAGGTTGCCAGATGGATTGAACAAATTCTTCCATTCTCTTTGCTATTGCTGATAGTCTTTATCCGTCAGCATTTAGAAGGGTTTCTTCACATGTTTTCATGTATTGGAAAATCAAATATGATTTGGAAGGAAACTCAGGGGAGTGGGGAAGGTGTTAAGAAAGAAGCTGAGGAACACTGTGGCAACAGTTTTTTCATCACAATTTGGATATCAGCTGTTATGTACAAGTCAAACGATATTGTCAAGAAACAGACTGCTCTAAAGGGAGAGAGGAAAATTTCTGTCCTTGCTGGTACTTCTATTGCATTTTTGGTTCATGTAATTGGGATTTACTGGTGGTGTCACAGTGATGATCTTCTGTACCCGTTAATCATGCTTCCACCAAAGACAGTACCACCTTTTTGGCATGCCTTGTTCATCATTTTGGTTAATGATACAATGGTGAGGCAGGTTGTAATGGCTCTCAAATGTTTTCTTCTTATTTACTACAAGAATGGTAGAGGTCATAATTTTCGCCGACAGGGTCAGATTTTAACTCTTGTGGAATACACTCTTCTGTTATACCGTGCATTATTACCCACACCTGTATGGTACCGGTTCTTCTTAAACAAAGATCAAGGGAGCCTTTTTTCATCACTGACAACAGGATTGTATTTAACTTTCAAGCTAACGTCTGTTGTTGAGAAGATTCAATCATTCGTTGCTGCATTTAAGGCTCTATCACGAAAAGAAGTCCATTATGGATCATATGCCACATCAGAACAGGCAAGTACTTTTATTCTGACTTATCTCATGTATTTGGGAGCTTATTTACTAGTGTGCGAAGGTGTATTCTTAGCAGTGCTAGGAAGATCTATGCATGTAAATGCTGCGGGAGACCTTTGTGCTATTTGTCAGGAGAAGATGAATGCTCCAATCCTGTTACGTTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAATGGTTTGAAAGAGAAAGAACTTGCCCTCTTTGCCGGGCACTGGTAAAGCCCGCAGAACTTCGAACATTTGGCGATGGGTCGACCAGCTTACTCTTCCAGTTGTTTTAG

Coding sequence (CDS)

ATGGAGACCTCGGCTTCCAATTCTGATCCTTACTCCAATTCTTCTTCACCCACAACTGCTCGCAGCTCCTCCAGATTTGGGGTCTCGATCCCTTCGCTGAATTTCTTCCGTTCGCCTTTGTCCGTCATTTTGGATTACTCGGGAATTCTCCCCACTAGGGCTGTTCGTCATGAATCTGAGCCTGTAATCAACGGCTCTGCCACTCCTGATTTGCGGGTTTATTCTCAAAATCAGAATCACTTGATGATCACTTCTTCCTCTTCCTTGTCTTCGTCTTCTTCTTCTCCTGCCACCACCTCTTCCTCCGGTAATTCCAGCCCCACTGGGGAGGTTTCGATTAGGATTATTGGGTCTGGTGAGCAAGATCCTTCTCCTAGTGGGTTGTTGCCAAATCAGGCTCTGGTTGGACAAGCTGGTTACGAGCAAAATGGCGGACTTCCTGTTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCTTTGGTGTCCACCCCTTCTTCATCTATTCAATCTGGAAGCAGTCGAGTCGATGGAGAATCTGGAAATGGCGTGGAAGAGAATGTTAATAGAGATTCGTCTTATCAGAGATACGATATTCAGCAGGTTGCCAGATGGATTGAACAAATTCTTCCATTCTCTTTGCTATTGCTGATAGTCTTTATCCGTCAGCATTTAGAAGGGTTTCTTCACATGTTTTCATGTATTGGAAAATCAAATATGATTTGGAAGGAAACTCAGGGGAGTGGGGAAGGTGTTAAGAAAGAAGCTGAGGAACACTGTGGCAACAGTTTTTTCATCACAATTTGGATATCAGCTGTTATGTACAAGTCAAACGATATTGTCAAGAAACAGACTGCTCTAAAGGGAGAGAGGAAAATTTCTGTCCTTGCTGGTACTTCTATTGCATTTTTGGTTCATGTAATTGGGATTTACTGGTGGTGTCACAGTGATGATCTTCTGTACCCGTTAATCATGCTTCCACCAAAGACAGTACCACCTTTTTGGCATGCCTTGTTCATCATTTTGGTTAATGATACAATGGTGAGGCAGGTTGTAATGGCTCTCAAATGTTTTCTTCTTATTTACTACAAGAATGGTAGAGGTCATAATTTTCGCCGACAGGGTCAGATTTTAACTCTTGTGGAATACACTCTTCTGTTATACCGTGCATTATTACCCACACCTGTATGGTACCGGTTCTTCTTAAACAAAGATCAAGGGAGCCTTTTTTCATCACTGACAACAGGATTGTATTTAACTTTCAAGCTAACGTCTGTTGTTGAGAAGATTCAATCATTCGTTGCTGCATTTAAGGCTCTATCACGAAAAGAAGTCCATTATGGATCATATGCCACATCAGAACAGGCAAGTACTTTTATTCTGACTTATCTCATGTATTTGGGAGCTTATTTACTAGTGTGCGAAGGTGTATTCTTAGCAGTGCTAGGAAGATCTATGCATGTAAATGCTGCGGGAGACCTTTGTGCTATTTGTCAGGAGAAGATGAATGCTCCAATCCTGTTACGTTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAATGGTTTGAAAGAGAAAGAACTTGCCCTCTTTGCCGGGCACTGGTAAAGCCCGCAGAACTTCGAACATTTGGCGATGGGTCGACCAGCTTACTCTTCCAGTTGTTTTAG

Protein sequence

METSASNSDPYSNSSSPTTARSSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVRHESEPVINGSATPDLRVYSQNQNHLMITSSSSLSSSSSSPATTSSSGNSSPTGEVSIRIIGSGEQDPSPSGLLPNQALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTPSSSIQSGSSRVDGESGNGVEENVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFLHMFSCIGKSNMIWKETQGSGEGVKKEAEEHCGNSFFITIWISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLIMLPPKTVPPFWHALFIILVNDTMVRQVVMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQASTFILTYLMYLGAYLLVCEGVFLAVLGRSMHVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF

Homology

[Close]

BLAST of Spg028628 vs. NCBI nr
Match: XP_022146804.1 (RING finger and transmembrane domain-containing protein 1-like [Momordica charantia])

HSP 1 Score: 846.7 bits (2186), Expect = 1.2e-241
Identity = 456/559 (81.57%), Postives = 473/559 (84.62%), Query Frame = 0


Query: 1   METSASNSDPYSNSSSPTTARSSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVRHESE 60
           METSASNSDP+SNSSSPTTARSSSRFG+S+PS+NFFRSPLSVILDYSGILPTRAVRHESE
Sbjct: 1   METSASNSDPFSNSSSPTTARSSSRFGLSLPSMNFFRSPLSVILDYSGILPTRAVRHESE 60

Query: 61  PV-INGSATPDLRVYSQNQNHLMITSSSSLSSSSSSPATTSSSGNSSPTGEVSIRIIGSG 120
           PV +NG+ATPDLRV+SQN NHL+  SSSS SSS++    T+SSGNSSP+GEVSIRIIGSG
Sbjct: 61  PVPVNGAATPDLRVFSQNHNHLITPSSSSSSSSTA----TTSSGNSSPSGEVSIRIIGSG 120

Query: 121 EQDPSPSGLLPNQALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTPSSSIQSGSSRVD 180
           EQDPS SGLLP+QALVGQAGYEQN G  VSGDQPESPDEERVPLV T SSSIQSGSSRVD
Sbjct: 121 EQDPSSSGLLPSQALVGQAGYEQNSGRSVSGDQPESPDEERVPLVPTASSSIQSGSSRVD 180

Query: 181 GESGNGVEENVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFLHMFSCIGK 240
           GESGNGVEE+VNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG          
Sbjct: 181 GESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG---------- 240

Query: 241 SNMIWKETQGSGEGVKKEAEEHCGNSFFITIWISAVMYKSNDIVKKQTALKGERKISVLA 300
                                     FFITIWISAVMYKSNDIVKKQTALKGERKISVLA
Sbjct: 241 --------------------------FFITIWISAVMYKSNDIVKKQTALKGERKISVLA 300

Query: 301 GTSIAFLVHVIGIYWWCHSDDLLYPLIMLPPKTVPPFWHALFIILVNDTMVRQVVMALKC 360
           GTSIAFLVHVIGIYWW H+DDLLYPL+MLPPKTVPPFWHALFIILVNDTM RQV MALKC
Sbjct: 301 GTSIAFLVHVIGIYWWSHTDDLLYPLVMLPPKTVPPFWHALFIILVNDTMARQVAMALKC 360

Query: 361 FLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGL 420
           FLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGL
Sbjct: 361 FLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGL 420

Query: 421 YLTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQASTFILTYLMYLGAYLLVCEGV 480
           YLTFKLTS+VEKIQSFVAAFKALSRKEVHYGSYATSEQ                      
Sbjct: 421 YLTFKLTSIVEKIQSFVAAFKALSRKEVHYGSYATSEQ---------------------- 480

Query: 481 FLAVLGRSMHVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVK 540
                     VNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVK
Sbjct: 481 ----------VNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVK 487

Query: 541 PAELRTFGDGSTSLLFQLF 559
           PAELRTFGDGSTSLLFQLF
Sbjct: 541 PAELRTFGDGSTSLLFQLF 487

[Close]

BLAST of Spg028628 vs. NCBI nr
Match: KAA0067043.1 (RING finger and transmembrane domain-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 840.9 bits (2171), Expect = 6.4e-240
Identity = 453/558 (81.18%), Postives = 468/558 (83.87%), Query Frame = 0


Query: 1   METSASNSDPYSNSSSPTTARSSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVRHESE 60
           METS+SNSDPYSNSSSPTTAR+SSRFG+S+PSLNFFRSPLSVILDYSGILPTRAVR ES+
Sbjct: 1   METSSSNSDPYSNSSSPTTARTSSRFGLSLPSLNFFRSPLSVILDYSGILPTRAVRDESD 60

Query: 61  PVINGSATPDLRVYSQNQNHLMITSSSSLSSSSSSPATTSSSGNSSPTGEVSIRIIGSGE 120
           PVIN +ATPDLR +SQNQNHL+ TSSSS S        T+SS N+ P+GEVSIRIIGSGE
Sbjct: 61  PVINAAATPDLRGFSQNQNHLIPTSSSSSS-------VTTSSANTIPSGEVSIRIIGSGE 120

Query: 121 QDPSPSGLLPNQALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTPSSSIQSGSSRVDG 180
           QDPSPS LLPN     Q GYEQNG LPVSGDQPESPDEERVPLVST SSSIQSG SRVDG
Sbjct: 121 QDPSPSALLPN-----QVGYEQNGRLPVSGDQPESPDEERVPLVSTASSSIQSGGSRVDG 180

Query: 181 ESGNGVEENVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFLHMFSCIGKS 240
           ESGNG+EE+VNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG           
Sbjct: 181 ESGNGMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG----------- 240

Query: 241 NMIWKETQGSGEGVKKEAEEHCGNSFFITIWISAVMYKSNDIVKKQTALKGERKISVLAG 300
                                    FFITIWISAVMYKSNDIVKKQTALKGERKISVLAG
Sbjct: 241 -------------------------FFITIWISAVMYKSNDIVKKQTALKGERKISVLAG 300

Query: 301 TSIAFLVHVIGIYWWCHSDDLLYPLIMLPPKTVPPFWHALFIILVNDTMVRQVVMALKCF 360
           TSI FLVHVIGIYWWCHSDDLLYPL+MLPPKTVPPFWHALFIILVNDTMVRQ  MALKCF
Sbjct: 301 TSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIILVNDTMVRQFAMALKCF 360

Query: 361 LLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY 420
           LLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY
Sbjct: 361 LLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY 420

Query: 421 LTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQASTFILTYLMYLGAYLLVCEGVF 480
           LTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQAS FIL+                
Sbjct: 421 LTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQASKFILS---------------- 480

Query: 481 LAVLGRSMHVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 540
                    VNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP
Sbjct: 481 ---------VNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 485

Query: 541 AELRTFGDGSTSLLFQLF 559
           AELRTFGDGSTSLLFQLF
Sbjct: 541 AELRTFGDGSTSLLFQLF 485

[Close]

BLAST of Spg028628 vs. NCBI nr
Match: XP_022995594.1 (E3 ubiquitin-protein ligase RNFT1-like [Cucurbita maxima])

HSP 1 Score: 839.0 bits (2166), Expect = 2.4e-239
Identity = 455/558 (81.54%), Postives = 470/558 (84.23%), Query Frame = 0


Query: 1   METSASNSDPYSNSSSPTTARSSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVRHESE 60
           METSASNSDPY NSSSPTT+ +SSRFGVSIPSLNFFRSPLSVILDYSGILPTRAV HESE
Sbjct: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60

Query: 61  PVINGSATPDLRVYSQNQNHLMITSSSSLSSSSSSPATTSSSGNSSPTGEVSIRIIGSGE 120
           P+INGSATPDLRVYSQNQNHLM T++SS SSSS+SP ++SSSGN+SP+GEVSIRIIGSGE
Sbjct: 61  PIINGSATPDLRVYSQNQNHLMTTTTSSSSSSSTSPTSSSSSGNTSPSGEVSIRIIGSGE 120

Query: 121 QDPSPSGLLPNQALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTPSSSIQSGSSRVDG 180
           QDPSP       ALVGQAGYEQNGGLPVSGDQPESPDEERVPLVST SSSIQSGSSRV  
Sbjct: 121 QDPSP-------ALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRV-S 180

Query: 181 ESGNGVEENVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFLHMFSCIGKS 240
           ESGNGVEE+VNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG           
Sbjct: 181 ESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG----------- 240

Query: 241 NMIWKETQGSGEGVKKEAEEHCGNSFFITIWISAVMYKSNDIVKKQTALKGERKISVLAG 300
                                    FFITI ISAVMYKSNDIVKKQTALKGERKISVLAG
Sbjct: 241 -------------------------FFITICISAVMYKSNDIVKKQTALKGERKISVLAG 300

Query: 301 TSIAFLVHVIGIYWWCHSDDLLYPLIMLPPKTVPPFWHALFIILVNDTMVRQVVMALKCF 360
           TSIAFLVHVIGIYWWCH DDLLYPL+MLPPKTVPPFWHALFIILVNDTMVRQV MALKC 
Sbjct: 301 TSIAFLVHVIGIYWWCHRDDLLYPLVMLPPKTVPPFWHALFIILVNDTMVRQVAMALKCL 360

Query: 361 LLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY 420
           LLIYYKNGRGHNFRRQGQILTL+EYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY
Sbjct: 361 LLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY 420

Query: 421 LTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQASTFILTYLMYLGAYLLVCEGVF 480
           LTFKLTSVVEKIQSFVAAFKALS+KEVHYGSYATSEQ                       
Sbjct: 421 LTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQ----------------------- 480

Query: 481 LAVLGRSMHVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 540
                    V+AAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP
Sbjct: 481 ---------VSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 482

Query: 541 AELRTFGDGSTSLLFQLF 559
           AELRTFGDGSTSLLFQLF
Sbjct: 541 AELRTFGDGSTSLLFQLF 482

[Close]

BLAST of Spg028628 vs. NCBI nr
Match: XP_022942268.1 (E3 ubiquitin-protein ligase RNFT1-like [Cucurbita moschata])

HSP 1 Score: 837.8 bits (2163), Expect = 5.5e-239
Identity = 457/558 (81.90%), Postives = 470/558 (84.23%), Query Frame = 0


Query: 1   METSASNSDPYSNSSSPTTARSSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVRHESE 60
           METSASNSDPY NSSSPTT+ +SSRFGVSIPSLNFFRSPLSVILDYSGILPTRAV HESE
Sbjct: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60

Query: 61  PVINGSATPDLRVYSQNQNHLMITSSSSLSSSSSSPATTSSSGNSSPTGEVSIRIIGSGE 120
           P+INGSATPDLRVYSQNQNHLM T+SSS SSSS+SP T+SSSGN+SP+GEVSIRIIGSGE
Sbjct: 61  PIINGSATPDLRVYSQNQNHLMTTTSSSSSSSSTSP-TSSSSGNTSPSGEVSIRIIGSGE 120

Query: 121 QDPSPSGLLPNQALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTPSSSIQSGSSRVDG 180
           QDPSP       ALVGQAGYEQNGGLPVSGDQPESPDEERVPLVST SSSIQSGSSRV  
Sbjct: 121 QDPSP-------ALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRV-S 180

Query: 181 ESGNGVEENVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFLHMFSCIGKS 240
           ESGNGVEE+VNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG           
Sbjct: 181 ESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG----------- 240

Query: 241 NMIWKETQGSGEGVKKEAEEHCGNSFFITIWISAVMYKSNDIVKKQTALKGERKISVLAG 300
                                    FFITI ISAVMYKSNDIVKKQTALKGERKISVLAG
Sbjct: 241 -------------------------FFITICISAVMYKSNDIVKKQTALKGERKISVLAG 300

Query: 301 TSIAFLVHVIGIYWWCHSDDLLYPLIMLPPKTVPPFWHALFIILVNDTMVRQVVMALKCF 360
           TSIAFLVHVIGIYWWCHSDDLLYPL+MLPPKTVPPFWHALFIILVNDTM RQV MALKC 
Sbjct: 301 TSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIILVNDTMARQVAMALKCL 360

Query: 361 LLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY 420
           LLIYYKNGRGHNFRRQGQILTL+EYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY
Sbjct: 361 LLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY 420

Query: 421 LTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQASTFILTYLMYLGAYLLVCEGVF 480
           LTFKLTSVVEKIQSFVAAFKALS+KEVHYGSYATSEQ                       
Sbjct: 421 LTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQ----------------------- 480

Query: 481 LAVLGRSMHVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 540
                    V+AAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP
Sbjct: 481 ---------VSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 481

Query: 541 AELRTFGDGSTSLLFQLF 559
           AELRTFGDGSTSLLFQLF
Sbjct: 541 AELRTFGDGSTSLLFQLF 481

[Close]

BLAST of Spg028628 vs. NCBI nr
Match: KAG6599935.1 (RING finger and transmembrane domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 836.6 bits (2160), Expect = 1.2e-238
Identity = 455/558 (81.54%), Postives = 468/558 (83.87%), Query Frame = 0


Query: 1   METSASNSDPYSNSSSPTTARSSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVRHESE 60
           METSASNSDPY NSSSPTT+ +SSRFGVSIPSLNFFRSPLSVILDYSGILPTRAV HESE
Sbjct: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60

Query: 61  PVINGSATPDLRVYSQNQNHLMITSSSSLSSSSSSPATTSSSGNSSPTGEVSIRIIGSGE 120
           P+INGSATPDLRVYSQNQNHLM T+S S SSSSS+  T+SSSGN+SP+GEVSIRIIGSGE
Sbjct: 61  PIINGSATPDLRVYSQNQNHLMTTTSPSSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSGE 120

Query: 121 QDPSPSGLLPNQALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTPSSSIQSGSSRVDG 180
           QDPSP       ALVGQAGYEQNGGLPVSGDQPESPDEERVPLVST SSSIQSGSSRV  
Sbjct: 121 QDPSP-------ALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRV-S 180

Query: 181 ESGNGVEENVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFLHMFSCIGKS 240
           ESGNGVEE+VNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG           
Sbjct: 181 ESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG----------- 240

Query: 241 NMIWKETQGSGEGVKKEAEEHCGNSFFITIWISAVMYKSNDIVKKQTALKGERKISVLAG 300
                                    FFITI ISAVMYKSNDIVKKQTALKGERKISVLAG
Sbjct: 241 -------------------------FFITICISAVMYKSNDIVKKQTALKGERKISVLAG 300

Query: 301 TSIAFLVHVIGIYWWCHSDDLLYPLIMLPPKTVPPFWHALFIILVNDTMVRQVVMALKCF 360
           TSIAFLVHVIGIYWWCHSDDLLYPL+MLPPKTVPPFWHALFIILVNDTM RQV MALKC 
Sbjct: 301 TSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIILVNDTMARQVAMALKCL 360

Query: 361 LLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY 420
           LLIYYKNGRGHNFRRQGQILTL+EYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY
Sbjct: 361 LLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY 420

Query: 421 LTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQASTFILTYLMYLGAYLLVCEGVF 480
           LTFKLTSVVEKIQSFVAAFKALS+KEVHYGSYATSEQ                       
Sbjct: 421 LTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQ----------------------- 480

Query: 481 LAVLGRSMHVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 540
                    V+AAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP
Sbjct: 481 ---------VSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 482

Query: 541 AELRTFGDGSTSLLFQLF 559
           AELRTFGDGSTSLLFQLF
Sbjct: 541 AELRTFGDGSTSLLFQLF 482

[Close]

BLAST of Spg028628 vs. ExPASy Swiss-Prot
Match: Q96EX2 (RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens OX=9606 GN=RNFT2 PE=2 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 1.7e-25
Identity = 80/295 (27.12%), Postives = 145/295 (49.15%), Query Frame = 0


Query: 268 ITIWISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLV-HVIGIYWWCHSDDLLYPLI 327
           + I +++    +N  +++Q +LK +R + V+    +AFL  + + + +   S  L   LI
Sbjct: 187 VCIGMASTFAYANSTLREQVSLKEKRSVLVILWI-LAFLAGNTLYVLYTFSSQQLYNSLI 246

Query: 328 MLPPK-TVPPFWHALFIILVNDTMVRQVVMALKCFLLIYYKNGRGHNFRRQGQILTLVEY 387
            L P   +  F+  L+I+ + D +++ + +ALKC ++   K       + +G+   ++E 
Sbjct: 247 FLKPNLEMLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILA--VKSKGKFYLVIEE 306

Query: 388 TLLLYRALLPTPVWYRFFLNKDQGSLF--SSLTTGLYLTFKLTSVVEKIQSFVAAFKALS 447
              L+R+L+P  +WY++ +  D  + +    +   LY   K   +  ++     A K L 
Sbjct: 307 LSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGVRKALKLLC 366

Query: 448 RKEVHYGSYATSEQASTFILTYLMYLGAYLLVCEGVFLAVLGRSMHVNAAGDLCAICQEK 507
             + +YG  AT +Q +                                 AGD+CAICQ +
Sbjct: 367 TSQ-NYGVRATGQQCT--------------------------------EAGDICAICQAE 426

Query: 508 MNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 559
              P++L C+H+FCE+C+  W +RERTCPLCR+ V    LR + DG+TS  FQ++
Sbjct: 427 FREPLILLCQHVFCEECLCLWLDRERTCPLCRS-VAVDTLRCWKDGATSAHFQVY 444

[Close]

BLAST of Spg028628 vs. ExPASy Swiss-Prot
Match: Q9DCN7 (E3 ubiquitin-protein ligase RNFT1 OS=Mus musculus OX=10090 GN=Rnft1 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.5e-24
Identity = 91/371 (24.53%), Postives = 156/371 (42.05%), Query Frame = 0


Query: 200 DIQQVARWIEQILPFSLLLLIVFIRQHLEGFLHMFSCIGKSNMIWKETQGSGEGVKKEAE 259
           + + + +W+++ LP+ L+L I  + QH+ G                     G G+     
Sbjct: 103 EFRYLFKWLQKSLPYILILGIKLVMQHITGI------------------SLGIGL----- 162

Query: 260 EHCGNSFFITIWISAVMYKSNDIV------KKQTALKGERKISVLAGTSIAFLVHVIGIY 319
                       ++  MY +  IV      ++ + L+    +  LAG+S+        +Y
Sbjct: 163 ------------LTTFMYANKSIVNQVFLRERSSKLRCAWLLVFLAGSSVL-------LY 222

Query: 320 WWCHSDDLLYPLIMLPPKTVP-PFWHALFIILVNDTMVRQVVMALKCFLLIYYKNGRGHN 379
           +  HS  L Y LI L P      FW  L+I+ + D +++   M LKC +L+         
Sbjct: 223 YTFHSQSLHYSLIFLNPTLEQLSFWEVLWIVGITDFILKFFFMGLKCLILLV--PSFIMP 282

Query: 380 FRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTG-----LYLTFKLTS 439
           F+ +G    L+E     YR  +P PVW+R+ ++  +    ++ + G     LYL  KL  
Sbjct: 283 FKSKGYWYMLLEELCQYYRIFVPIPVWFRYLISYGEFGNVTTWSLGILLALLYLILKLLD 342

Query: 440 VVEKIQSFVAAFKALSRKEVHYGSYATSEQASTFILTYLMYLGAYLLVCEGVFLAVLGRS 499
               +++F    +    +   YG  A+  Q S                            
Sbjct: 343 FFGHLRTFRQVLRVFFTRP-SYGVPASKRQCSDM-------------------------- 395

Query: 500 MHVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFG 559
                   +C ICQ +   P+LL C+HIFCE+C++ WF RE+TCPLCR ++    +  + 
Sbjct: 403 ------DGICTICQAEFQKPVLLFCQHIFCEECITLWFNREKTCPLCRTVISEC-INKWK 395

[Close]

BLAST of Spg028628 vs. ExPASy Swiss-Prot
Match: Q5RAG4 (RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii OX=9601 GN=RNFT2 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.2e-24
Identity = 79/295 (26.78%), Postives = 143/295 (48.47%), Query Frame = 0


Query: 268 ITIWISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLV-HVIGIYWWCHSDDLLYPLI 327
           + I +++    +N  +++Q +LK +R + V+    +AFL  + + + +   S  L   LI
Sbjct: 187 VCIGMASTFAYANSTLREQVSLKEKRSVLVILWI-LAFLAGNTLYVLYTFSSQQLYNSLI 246

Query: 328 MLPPK-TVPPFWHALFIILVNDTMVRQVVMALKCFLLIYYKNGRGHNFRRQGQILTLVEY 387
            L P      F+  L+I+ + D +++ + +ALKC ++   K       + +G+   ++E 
Sbjct: 247 FLKPNLETLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILA--VKSKGKFYLVIEE 306

Query: 388 TLLLYRALLPTPVWYRFFLNKDQGSLF--SSLTTGLYLTFKLTSVVEKIQSFVAAFKALS 447
              L+R+L+P  +WY++ +  D  + +    +   LY   K   +  ++     A K L 
Sbjct: 307 LSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGVRKALKLLC 366

Query: 448 RKEVHYGSYATSEQASTFILTYLMYLGAYLLVCEGVFLAVLGRSMHVNAAGDLCAICQEK 507
             + +YG  AT +Q +                                 AGD+CAICQ +
Sbjct: 367 TSQ-NYGVRATGQQCT--------------------------------EAGDICAICQAE 426

Query: 508 MNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 559
              P++L C+H+FCE+C+  W +RERTCPL R+ V    LR + DG+TS  FQ++
Sbjct: 427 FREPLILLCQHVFCEECLCLWLDRERTCPLSRS-VAVDTLRCWKDGATSAHFQVY 444

[Close]

BLAST of Spg028628 vs. ExPASy Swiss-Prot
Match: Q5M7Z0 (E3 ubiquitin-protein ligase RNFT1 OS=Homo sapiens OX=9606 GN=RNFT1 PE=1 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 4.2e-24
Identity = 81/289 (28.03%), Postives = 130/289 (44.98%), Query Frame = 0


Query: 272 ISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLV-HVIGIYWWCHSDDLLYPLIMLPP 331
           ++  MY +  IV  Q  L+ ER   +     + FL    + +Y+  HS  L Y LI L P
Sbjct: 180 LTTFMYANKSIV-NQVFLR-ERSSKIQCAWLLVFLAGSSVLLYYTFHSQSLYYSLIFLNP 239

Query: 332 KTVP-PFWHALFIILVNDTMVRQVVMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLL 391
                 FW   +I+ + D +++   M LKC +L+         F+ +G    L+E     
Sbjct: 240 TLDHLSFWEVFWIVGITDFILKFFFMGLKCLILLV--PSFIMPFKSKGYWYMLLEELCQY 299

Query: 392 YRALLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSRKEVHY 451
           YR  +P PVW+R+ ++  +    +  + G+ L   L  ++ K+  F             +
Sbjct: 300 YRTFVPIPVWFRYLISYGEFGNVTRWSLGILLA--LLYLILKLLEF-------------F 359

Query: 452 GSYATSEQASTFILTYLMYLGAYLLVCEGVFLAVLGRSMHVNAAGDLCAICQEKMNAPIL 511
           G   T  Q      T   Y              V       +   D+C+ICQ +   PIL
Sbjct: 360 GHLRTFRQVLRIFFTQPSY-------------GVAASKRQCSDVDDICSICQAEFQKPIL 419

Query: 512 LRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 559
           L C+HIFCE+C++ WF RE+TCPLCR ++    +  + DG+TS   Q++
Sbjct: 420 LICQHIFCEECMTLWFNREKTCPLCRTVISD-HINKWKDGATSSHLQIY 435

[Close]

BLAST of Spg028628 vs. ExPASy Swiss-Prot
Match: Q3UF64 (RING finger and transmembrane domain-containing protein 2 OS=Mus musculus OX=10090 GN=Rnft2 PE=2 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 2.1e-23
Identity = 78/295 (26.44%), Postives = 142/295 (48.14%), Query Frame = 0


Query: 268 ITIWISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLV-HVIGIYWWCHSDDLLYPLI 327
           + I +++    +N  +++Q +LK +R + V+    +AFL  + + + +   S  L   LI
Sbjct: 188 VCIGMASTFAYANSTLREQVSLKEKRSVLVILWI-LAFLAGNTMYVLYTFSSQQLYSSLI 247

Query: 328 MLPPK-TVPPFWHALFIILVNDTMVRQVVMALKCFLLIYYKNGRGHNFRRQGQILTLVEY 387
            L P      F+  L+I+ + D +++ + +ALKC ++   K       + +G+   ++E 
Sbjct: 248 FLKPNLETLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILA--VKSKGKFYLVIEE 307

Query: 388 TLLLYRALLPTPVWYRFFLNKDQGSLF--SSLTTGLYLTFKLTSVVEKIQSFVAAFKALS 447
              L+R+L+P  +WY++ +  D  + +    +   LY   K   +  ++     A K L 
Sbjct: 308 LSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGLRKALKLLC 367

Query: 448 RKEVHYGSYATSEQASTFILTYLMYLGAYLLVCEGVFLAVLGRSMHVNAAGDLCAICQEK 507
             + +YG  AT +Q +                                 AG +CAICQ +
Sbjct: 368 TSQ-NYGVRATGQQCT--------------------------------EAGAVCAICQAE 427

Query: 508 MNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 559
              P++L C+H+FCE+C+  W +RERTCPLCR+ V    LR + DG+TS   Q++
Sbjct: 428 FRDPMILLCQHVFCEECLCLWLDRERTCPLCRS-VAVDTLRCWKDGATSAHLQVY 445

[Close]

BLAST of Spg028628 vs. ExPASy TrEMBL
Match: A0A6J1CZ45 (RING finger and transmembrane domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=LOC111015921 PE=4 SV=1)

HSP 1 Score: 846.7 bits (2186), Expect = 5.7e-242
Identity = 456/559 (81.57%), Postives = 473/559 (84.62%), Query Frame = 0


Query: 1   METSASNSDPYSNSSSPTTARSSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVRHESE 60
           METSASNSDP+SNSSSPTTARSSSRFG+S+PS+NFFRSPLSVILDYSGILPTRAVRHESE
Sbjct: 1   METSASNSDPFSNSSSPTTARSSSRFGLSLPSMNFFRSPLSVILDYSGILPTRAVRHESE 60

Query: 61  PV-INGSATPDLRVYSQNQNHLMITSSSSLSSSSSSPATTSSSGNSSPTGEVSIRIIGSG 120
           PV +NG+ATPDLRV+SQN NHL+  SSSS SSS++    T+SSGNSSP+GEVSIRIIGSG
Sbjct: 61  PVPVNGAATPDLRVFSQNHNHLITPSSSSSSSSTA----TTSSGNSSPSGEVSIRIIGSG 120

Query: 121 EQDPSPSGLLPNQALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTPSSSIQSGSSRVD 180
           EQDPS SGLLP+QALVGQAGYEQN G  VSGDQPESPDEERVPLV T SSSIQSGSSRVD
Sbjct: 121 EQDPSSSGLLPSQALVGQAGYEQNSGRSVSGDQPESPDEERVPLVPTASSSIQSGSSRVD 180

Query: 181 GESGNGVEENVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFLHMFSCIGK 240
           GESGNGVEE+VNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG          
Sbjct: 181 GESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG---------- 240

Query: 241 SNMIWKETQGSGEGVKKEAEEHCGNSFFITIWISAVMYKSNDIVKKQTALKGERKISVLA 300
                                     FFITIWISAVMYKSNDIVKKQTALKGERKISVLA
Sbjct: 241 --------------------------FFITIWISAVMYKSNDIVKKQTALKGERKISVLA 300

Query: 301 GTSIAFLVHVIGIYWWCHSDDLLYPLIMLPPKTVPPFWHALFIILVNDTMVRQVVMALKC 360
           GTSIAFLVHVIGIYWW H+DDLLYPL+MLPPKTVPPFWHALFIILVNDTM RQV MALKC
Sbjct: 301 GTSIAFLVHVIGIYWWSHTDDLLYPLVMLPPKTVPPFWHALFIILVNDTMARQVAMALKC 360

Query: 361 FLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGL 420
           FLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGL
Sbjct: 361 FLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGL 420

Query: 421 YLTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQASTFILTYLMYLGAYLLVCEGV 480
           YLTFKLTS+VEKIQSFVAAFKALSRKEVHYGSYATSEQ                      
Sbjct: 421 YLTFKLTSIVEKIQSFVAAFKALSRKEVHYGSYATSEQ---------------------- 480

Query: 481 FLAVLGRSMHVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVK 540
                     VNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVK
Sbjct: 481 ----------VNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVK 487

Query: 541 PAELRTFGDGSTSLLFQLF 559
           PAELRTFGDGSTSLLFQLF
Sbjct: 541 PAELRTFGDGSTSLLFQLF 487

[Close]

BLAST of Spg028628 vs. ExPASy TrEMBL
Match: A0A5A7VG27 (RING finger and transmembrane domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G00890 PE=4 SV=1)

HSP 1 Score: 840.9 bits (2171), Expect = 3.1e-240
Identity = 453/558 (81.18%), Postives = 468/558 (83.87%), Query Frame = 0


Query: 1   METSASNSDPYSNSSSPTTARSSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVRHESE 60
           METS+SNSDPYSNSSSPTTAR+SSRFG+S+PSLNFFRSPLSVILDYSGILPTRAVR ES+
Sbjct: 1   METSSSNSDPYSNSSSPTTARTSSRFGLSLPSLNFFRSPLSVILDYSGILPTRAVRDESD 60

Query: 61  PVINGSATPDLRVYSQNQNHLMITSSSSLSSSSSSPATTSSSGNSSPTGEVSIRIIGSGE 120
           PVIN +ATPDLR +SQNQNHL+ TSSSS S        T+SS N+ P+GEVSIRIIGSGE
Sbjct: 61  PVINAAATPDLRGFSQNQNHLIPTSSSSSS-------VTTSSANTIPSGEVSIRIIGSGE 120

Query: 121 QDPSPSGLLPNQALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTPSSSIQSGSSRVDG 180
           QDPSPS LLPN     Q GYEQNG LPVSGDQPESPDEERVPLVST SSSIQSG SRVDG
Sbjct: 121 QDPSPSALLPN-----QVGYEQNGRLPVSGDQPESPDEERVPLVSTASSSIQSGGSRVDG 180

Query: 181 ESGNGVEENVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFLHMFSCIGKS 240
           ESGNG+EE+VNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG           
Sbjct: 181 ESGNGMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG----------- 240

Query: 241 NMIWKETQGSGEGVKKEAEEHCGNSFFITIWISAVMYKSNDIVKKQTALKGERKISVLAG 300
                                    FFITIWISAVMYKSNDIVKKQTALKGERKISVLAG
Sbjct: 241 -------------------------FFITIWISAVMYKSNDIVKKQTALKGERKISVLAG 300

Query: 301 TSIAFLVHVIGIYWWCHSDDLLYPLIMLPPKTVPPFWHALFIILVNDTMVRQVVMALKCF 360
           TSI FLVHVIGIYWWCHSDDLLYPL+MLPPKTVPPFWHALFIILVNDTMVRQ  MALKCF
Sbjct: 301 TSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIILVNDTMVRQFAMALKCF 360

Query: 361 LLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY 420
           LLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY
Sbjct: 361 LLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY 420

Query: 421 LTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQASTFILTYLMYLGAYLLVCEGVF 480
           LTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQAS FIL+                
Sbjct: 421 LTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQASKFILS---------------- 480

Query: 481 LAVLGRSMHVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 540
                    VNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP
Sbjct: 481 ---------VNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 485

Query: 541 AELRTFGDGSTSLLFQLF 559
           AELRTFGDGSTSLLFQLF
Sbjct: 541 AELRTFGDGSTSLLFQLF 485

[Close]

BLAST of Spg028628 vs. ExPASy TrEMBL
Match: A0A6J1K6D2 (E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita maxima OX=3661 GN=LOC111491080 PE=4 SV=1)

HSP 1 Score: 839.0 bits (2166), Expect = 1.2e-239
Identity = 455/558 (81.54%), Postives = 470/558 (84.23%), Query Frame = 0


Query: 1   METSASNSDPYSNSSSPTTARSSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVRHESE 60
           METSASNSDPY NSSSPTT+ +SSRFGVSIPSLNFFRSPLSVILDYSGILPTRAV HESE
Sbjct: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60

Query: 61  PVINGSATPDLRVYSQNQNHLMITSSSSLSSSSSSPATTSSSGNSSPTGEVSIRIIGSGE 120
           P+INGSATPDLRVYSQNQNHLM T++SS SSSS+SP ++SSSGN+SP+GEVSIRIIGSGE
Sbjct: 61  PIINGSATPDLRVYSQNQNHLMTTTTSSSSSSSTSPTSSSSSGNTSPSGEVSIRIIGSGE 120

Query: 121 QDPSPSGLLPNQALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTPSSSIQSGSSRVDG 180
           QDPSP       ALVGQAGYEQNGGLPVSGDQPESPDEERVPLVST SSSIQSGSSRV  
Sbjct: 121 QDPSP-------ALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRV-S 180

Query: 181 ESGNGVEENVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFLHMFSCIGKS 240
           ESGNGVEE+VNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG           
Sbjct: 181 ESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG----------- 240

Query: 241 NMIWKETQGSGEGVKKEAEEHCGNSFFITIWISAVMYKSNDIVKKQTALKGERKISVLAG 300
                                    FFITI ISAVMYKSNDIVKKQTALKGERKISVLAG
Sbjct: 241 -------------------------FFITICISAVMYKSNDIVKKQTALKGERKISVLAG 300

Query: 301 TSIAFLVHVIGIYWWCHSDDLLYPLIMLPPKTVPPFWHALFIILVNDTMVRQVVMALKCF 360
           TSIAFLVHVIGIYWWCH DDLLYPL+MLPPKTVPPFWHALFIILVNDTMVRQV MALKC 
Sbjct: 301 TSIAFLVHVIGIYWWCHRDDLLYPLVMLPPKTVPPFWHALFIILVNDTMVRQVAMALKCL 360

Query: 361 LLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY 420
           LLIYYKNGRGHNFRRQGQILTL+EYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY
Sbjct: 361 LLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY 420

Query: 421 LTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQASTFILTYLMYLGAYLLVCEGVF 480
           LTFKLTSVVEKIQSFVAAFKALS+KEVHYGSYATSEQ                       
Sbjct: 421 LTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQ----------------------- 480

Query: 481 LAVLGRSMHVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 540
                    V+AAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP
Sbjct: 481 ---------VSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 482

Query: 541 AELRTFGDGSTSLLFQLF 559
           AELRTFGDGSTSLLFQLF
Sbjct: 541 AELRTFGDGSTSLLFQLF 482

[Close]

BLAST of Spg028628 vs. ExPASy TrEMBL
Match: A0A6J1FUD5 (E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita moschata OX=3662 GN=LOC111447364 PE=4 SV=1)

HSP 1 Score: 837.8 bits (2163), Expect = 2.6e-239
Identity = 457/558 (81.90%), Postives = 470/558 (84.23%), Query Frame = 0


Query: 1   METSASNSDPYSNSSSPTTARSSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVRHESE 60
           METSASNSDPY NSSSPTT+ +SSRFGVSIPSLNFFRSPLSVILDYSGILPTRAV HESE
Sbjct: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60

Query: 61  PVINGSATPDLRVYSQNQNHLMITSSSSLSSSSSSPATTSSSGNSSPTGEVSIRIIGSGE 120
           P+INGSATPDLRVYSQNQNHLM T+SSS SSSS+SP T+SSSGN+SP+GEVSIRIIGSGE
Sbjct: 61  PIINGSATPDLRVYSQNQNHLMTTTSSSSSSSSTSP-TSSSSGNTSPSGEVSIRIIGSGE 120

Query: 121 QDPSPSGLLPNQALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTPSSSIQSGSSRVDG 180
           QDPSP       ALVGQAGYEQNGGLPVSGDQPESPDEERVPLVST SSSIQSGSSRV  
Sbjct: 121 QDPSP-------ALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRV-S 180

Query: 181 ESGNGVEENVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFLHMFSCIGKS 240
           ESGNGVEE+VNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG           
Sbjct: 181 ESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG----------- 240

Query: 241 NMIWKETQGSGEGVKKEAEEHCGNSFFITIWISAVMYKSNDIVKKQTALKGERKISVLAG 300
                                    FFITI ISAVMYKSNDIVKKQTALKGERKISVLAG
Sbjct: 241 -------------------------FFITICISAVMYKSNDIVKKQTALKGERKISVLAG 300

Query: 301 TSIAFLVHVIGIYWWCHSDDLLYPLIMLPPKTVPPFWHALFIILVNDTMVRQVVMALKCF 360
           TSIAFLVHVIGIYWWCHSDDLLYPL+MLPPKTVPPFWHALFIILVNDTM RQV MALKC 
Sbjct: 301 TSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIILVNDTMARQVAMALKCL 360

Query: 361 LLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY 420
           LLIYYKNGRGHNFRRQGQILTL+EYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY
Sbjct: 361 LLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY 420

Query: 421 LTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQASTFILTYLMYLGAYLLVCEGVF 480
           LTFKLTSVVEKIQSFVAAFKALS+KEVHYGSYATSEQ                       
Sbjct: 421 LTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQ----------------------- 480

Query: 481 LAVLGRSMHVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 540
                    V+AAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP
Sbjct: 481 ---------VSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 481

Query: 541 AELRTFGDGSTSLLFQLF 559
           AELRTFGDGSTSLLFQLF
Sbjct: 541 AELRTFGDGSTSLLFQLF 481

[Close]

BLAST of Spg028628 vs. ExPASy TrEMBL
Match: A0A5D3DSS9 (RING finger and transmembrane domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00530 PE=4 SV=1)

HSP 1 Score: 830.5 bits (2144), Expect = 4.2e-237
Identity = 448/558 (80.29%), Postives = 462/558 (82.80%), Query Frame = 0


Query: 1   METSASNSDPYSNSSSPTTARSSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVRHESE 60
           METS+SNSDPYSNSSSPTTAR+SSRFG+S+PSLNFFRSPLSVILDYSGILPTRAVR ES+
Sbjct: 1   METSSSNSDPYSNSSSPTTARTSSRFGLSLPSLNFFRSPLSVILDYSGILPTRAVRDESD 60

Query: 61  PVINGSATPDLRVYSQNQNHLMITSSSSLSSSSSSPATTSSSGNSSPTGEVSIRIIGSGE 120
           PVIN +ATPDLR +SQNQNHL+ TSSSS S        T+SS N+ P+GEVSIRIIGSGE
Sbjct: 61  PVINAAATPDLRGFSQNQNHLIPTSSSSSS-------VTTSSANTIPSGEVSIRIIGSGE 120

Query: 121 QDPSPSGLLPNQALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTPSSSIQSGSSRVDG 180
           QDPSPS LLPN     Q GYEQNG LPVSGDQPESPDEERVPLVST SSSIQSG SRVDG
Sbjct: 121 QDPSPSALLPN-----QVGYEQNGRLPVSGDQPESPDEERVPLVSTASSSIQSGGSRVDG 180

Query: 181 ESGNGVEENVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFLHMFSCIGKS 240
           ESGNG+EE+VNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG           
Sbjct: 181 ESGNGMEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEG----------- 240

Query: 241 NMIWKETQGSGEGVKKEAEEHCGNSFFITIWISAVMYKSNDIVKKQTALKGERKISVLAG 300
                                    FFITIWISAVMYKSNDIVKKQTALKGERKISVLAG
Sbjct: 241 -------------------------FFITIWISAVMYKSNDIVKKQTALKGERKISVLAG 300

Query: 301 TSIAFLVHVIGIYWWCHSDDLLYPLIMLPPKTVPPFWHALFIILVNDTMVRQVVMALKCF 360
           TSI FLVHVIGIYWWCHSDDLLYPL+MLPPKTVPPFWHALFIILVNDTMVRQ  MALKCF
Sbjct: 301 TSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIILVNDTMVRQFAMALKCF 360

Query: 361 LLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY 420
           LLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY
Sbjct: 361 LLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLY 420

Query: 421 LTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQASTFILTYLMYLGAYLLVCEGVF 480
           LTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQ                       
Sbjct: 421 LTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQ----------------------- 478

Query: 481 LAVLGRSMHVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 540
                    VNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP
Sbjct: 481 ---------VNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 478

Query: 541 AELRTFGDGSTSLLFQLF 559
           AELRTFGDGSTSLLFQLF
Sbjct: 541 AELRTFGDGSTSLLFQLF 478

[Close]

BLAST of Spg028628 vs. TAIR 10
Match: AT5G01960.1 (RING/U-box superfamily protein )

HSP 1 Score: 494.6 bits (1272), Expect = 1.1e-139
Identity = 287/560 (51.25%), Postives = 341/560 (60.89%), Query Frame = 0


Query: 1   METSASNSDPYSNSSSPTTARSSSRFGVSIPSLNFFRSPLSVILDYSGILPTR-AVRHES 60
           MET  ++ D +         R S R    + + N  ++P+S +L+YSG+   R +  HE+
Sbjct: 1   METPGASHDSF---------RGSPRRNSILSASNIIQAPISTLLEYSGLFRARPSPSHEA 60

Query: 61  EPVINGSATPDLRVYSQNQNHLMITSSSSLSSSSSSPATTSSSGNSSPTGEVSIRIIGSG 120
           E +++                     SS LS+                 GEV+IRIIG+ 
Sbjct: 61  ETLVS-------------------DDSSGLSN-----------------GEVAIRIIGNT 120

Query: 121 EQDPSPSGLLPNQALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTPSSSIQSGSSR-V 180
           EQD          A        + G   + G      D         P      G+S+  
Sbjct: 121 EQD----------AETDTNALREPGHSELLGSSATQVD---------PMGGASEGASQAA 180

Query: 181 DGESGNGVEENVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFLHMFSCIG 240
            G+   G  +  +RDS YQRYDIQQ ARWIEQILPFSLLLL+VFIRQHL+G         
Sbjct: 181 PGDPAAG--DAASRDSPYQRYDIQQAARWIEQILPFSLLLLVVFIRQHLQG--------- 240

Query: 241 KSNMIWKETQGSGEGVKKEAEEHCGNSFFITIWISAVMYKSNDIVKKQTALKGERKISVL 300
                                      FF+ IWI+AVM+KSNDI+KKQTALKGER IS L
Sbjct: 241 ---------------------------FFVAIWIAAVMFKSNDILKKQTALKGERHISAL 300

Query: 301 AGTSIAFLVHVIGIYWWCHSDDLLYPLIMLPPKTVPPFWHALFIILVNDTMVRQVVMALK 360
            G S+AF  HV+G+YWW   DDLLYPLIMLPPK++PPFWHA+FII+VNDT+VRQ  M  K
Sbjct: 301 IGISVAFTAHVVGVYWWFRKDDLLYPLIMLPPKSIPPFWHAIFIIVVNDTLVRQASMIFK 360

Query: 361 CFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTG 420
           CFLL+YYKN RG N+R+QGQ+LTLVEY +LLYR+LLPTPVWYRFFLNKD GSLFSSL TG
Sbjct: 361 CFLLMYYKNSRGRNYRKQGQLLTLVEYFMLLYRSLLPTPVWYRFFLNKDYGSLFSSLMTG 420

Query: 421 LYLTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQASTFILTYLMYLGAYLLVCEG 480
           LYLTFKLTSVVEK+QSF  A KALSRKEVHYGSYAT+EQ                     
Sbjct: 421 LYLTFKLTSVVEKVQSFFTALKALSRKEVHYGSYATTEQ--------------------- 426

Query: 481 VFLAVLGRSMHVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALV 540
                      VNAAGDLCAICQEKM+ PILLRCKH+FCEDCVSEWFERERTCPLCRALV
Sbjct: 481 -----------VNAAGDLCAICQEKMHTPILLRCKHMFCEDCVSEWFERERTCPLCRALV 426

Query: 541 KPAELRTFGDGSTSLLFQLF 559
           KPA+L++FGDGSTSL FQ+F
Sbjct: 541 KPADLKSFGDGSTSLFFQIF 426

[Close]

BLAST of Spg028628 vs. TAIR 10
Match: AT1G65040.2 (RING/U-box superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-08
Identity = 25/49 (51.02%), Postives = 31/49 (63.27%), Query Frame = 0


Query: 497 CAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRT 546
           C IC+E+M +   L C H+F   C+  W ER+ TCP CRALV PAE  T
Sbjct: 292 CIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENAT 340

[Close]

BLAST of Spg028628 vs. TAIR 10
Match: AT1G65040.1 (RING/U-box superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-08
Identity = 25/49 (51.02%), Postives = 31/49 (63.27%), Query Frame = 0


Query: 497 CAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRT 546
           C IC+E+M +   L C H+F   C+  W ER+ TCP CRALV PAE  T
Sbjct: 113 CIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENAT 161

[Close]

BLAST of Spg028628 vs. TAIR 10
Match: AT1G65040.3 (RING/U-box superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-08
Identity = 25/49 (51.02%), Postives = 31/49 (63.27%), Query Frame = 0


Query: 497 CAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRT 546
           C IC+E+M +   L C H+F   C+  W ER+ TCP CRALV PAE  T
Sbjct: 221 CIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENAT 269

[Close]

BLAST of Spg028628 vs. TAIR 10
Match: AT3G16090.1 (RING/U-box superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 3.3e-08
Identity = 25/56 (44.64%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 490 VNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRT 546
           + A+   C IC+E+M     L C H+F   C+  W ER++TCP CRALV P E  T
Sbjct: 285 LTASDATCIICREEMTNAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENAT 340

The following BLAST results are available for this feature:

BLAST of Spg028628 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146804.1	1.2e-241	81.57	RING finger and transmembrane domain-containing protein 1-like [Momordica charan...	[more]
KAA0067043.1	6.4e-240	81.18	RING finger and transmembrane domain-containing protein 1-like [Cucumis melo var...	[more]
XP_022995594.1	2.4e-239	81.54	E3 ubiquitin-protein ligase RNFT1-like [Cucurbita maxima]	[more]
XP_022942268.1	5.5e-239	81.90	E3 ubiquitin-protein ligase RNFT1-like [Cucurbita moschata]	[more]
KAG6599935.1	1.2e-238	81.54	RING finger and transmembrane domain-containing protein 2, partial [Cucurbita ar...	[more]

BLAST of Spg028628 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96EX2	1.7e-25	27.12	RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens OX=960...	[more]
Q9DCN7	2.5e-24	24.53	E3 ubiquitin-protein ligase RNFT1 OS=Mus musculus OX=10090 GN=Rnft1 PE=2 SV=1	[more]
Q5RAG4	3.2e-24	26.78	RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii OX=960...	[more]
Q5M7Z0	4.2e-24	28.03	E3 ubiquitin-protein ligase RNFT1 OS=Homo sapiens OX=9606 GN=RNFT1 PE=1 SV=2	[more]
Q3UF64	2.1e-23	26.44	RING finger and transmembrane domain-containing protein 2 OS=Mus musculus OX=100...	[more]

BLAST of Spg028628 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZ45	5.7e-242	81.57	RING finger and transmembrane domain-containing protein 1-like OS=Momordica char...	[more]
A0A5A7VG27	3.1e-240	81.18	RING finger and transmembrane domain-containing protein 1-like OS=Cucumis melo v...	[more]
A0A6J1K6D2	1.2e-239	81.54	E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita maxima OX=3661 GN=LOC1114910...	[more]
A0A6J1FUD5	2.6e-239	81.90	E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A5D3DSS9	4.2e-237	80.29	RING finger and transmembrane domain-containing protein 1-like OS=Cucumis melo v...	[more]

BLAST of Spg028628 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01960.1	1.1e-139	51.25	RING/U-box superfamily protein	[more]
AT1G65040.2	1.1e-08	51.02	RING/U-box superfamily protein	[more]
AT1G65040.1	1.1e-08	51.02	RING/U-box superfamily protein	[more]
AT1G65040.3	1.1e-08	51.02	RING/U-box superfamily protein	[more]
AT3G16090.1	3.3e-08	44.64	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 497..534 e-value: 5.1E-8 score: 42.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 497..535 score: 13.684271
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 490..554 e-value: 3.3E-16 score: 61.2
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 495..538 e-value: 2.5E-10 score: 40.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..191
None	No IPR available	PANTHER	PTHR15860:SF19	RING/U-BOX SUPERFAMILY PROTEIN	coord: 1..243 coord: 265..459
None	No IPR available	PANTHER	PTHR15860:SF19	RING/U-BOX SUPERFAMILY PROTEIN	coord: 487..558
None	No IPR available	CDD	cd16532	RING-HC_RNFT1_like	coord: 496..535 e-value: 5.52218E-27 score: 100.821
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 495..540
IPR044235	RING finger and transmembrane domain-containing protein 1/2	PANTHER	PTHR15860	UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN	coord: 1..243 coord: 265..459 coord: 487..558
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 512..521

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg028628.1	Spg028628.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1904294	positive regulation of ERAD pathway
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity