Spg028529 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTATCGTGTCGTTAGAAAAGGTTTTGTTCCCTGGCCTTTCGTTTTGGTCTCTCTCTCCAGTCCTCGCTTCTGAGATTTCCATTTCCCTCGCATTTCTTCCTTTCAATTCCTTTTCAAATTTCTCCAATTTCTTCTTCCATTCTTCGATTCGCTAGATCTTGTTTCAGATCCATGGATCTTTGCTAGCTCCAGCATTATATCTTCCTCTTTTGTTGCTGATCGTTTACATTGCTTCTTCAATCTCGCGCCTCGAATCTACGGTCACACGGTTCTGTTTTTCATGAGGTTCTGTTTGGTTGCACGCTTTTTGAGGTGAGTGAGTGTGTGTTGGAGTGGCTTTGTTTGTTTTTTAGCATCTTTTGGTGGAAGAAGAGATGGAATGGTTCATGGTGGTGATGAATCTTTTCGTTTTTGTGTGTTTGATGTTTGGAGAAGAAATTTTAGTGTAGGTTTCTTGTGGTTTCTTTCTTCCTTTTTTTACTACGGTTGAACGGAAAGGTAGATGTCTTTTTTTTTTTTTTTATTATGTGCTTTTATTTTGAGATGGATTGATTTGGCGCATGTTTAGTGTACGATTAGATCGACTTGAAATGGTGTTTTTCATTTGATATATATGCTCGAATCTGGATAATGGAATGAGAATGGTGCAATTCTTATTTTCTACATCAATTTGATGTTTTACTTTTATTAACATTATTATTTCTTACAGATACTCTACTGTAATATCGGAAATCCTCAGTCTCTTAGTCAGGAGCCAATAACTTTCTTCCGTGAGGTTTGCTTGCTCTTTTTCACAGTAAACATTGTCCAACGTTTTTACAGTGGATGGAAAAATTAATGTTTATGATTCTTAGGTTTCTTGCATTGTGTGATCATCCTGCCATTTTATTTATATTTTTGTTAGCTGCAAGTTTAATTTTGAATTATATGCTTAAATGAATTTTAGAAGTTTCAATTCTAAATACTTTTATCTCATTAGTTGAGTGGTGGTTACAGAAATTCATATATATATTTGATAAGAGACCATTTTCTGTTGAGATGAATGAAATAATACAAAGGAGGCCCTAGCAGGACAAGCCAAAAGTGTTGGATTACACACACACAACTAACAAAAAAGAACCTGAACTCTTTCCTTCGGATGGAAGGATCTTGAATAAAATGAACTAGTTTTGTGTCATTTCATTGTTTGTTTTGAACTTCCCCCATCTTAAACACATAATCTGATAAGCAATTGCATATTTTCGTTGAGTTGAGAGTTCTCTAGTTGGAAGTCTCTTATTTGCAGAATTTTCTTTTAGAAATAGGAATTTGCACGCTTGTTCTCTGGTCCAACGACTTTGAACCTACGAAGCAGAAATTTCTCAAGTCTGTAAAGTTTAACTTGTTGAAGAATGAATTCATTGTTCATTGCTTGTGTCAATGAATTGTTCCACTTTTAAAACATAAATCACATTCTAGAGGAGTTACCATTCAATTTAGAAACGAGGAAGAGAGCAGAGTCATGTGTTGTAGCTTTACCAAATGCAACTACTTCTAGAATACGTTTTATATTAGGTGATTCAGTGATTCTAAATTCTAAGAGGCAAGTGATATTGGTTATTTGATTTCATGTTAAGTTATTTTGAAGGTTTGTGTTTATATATTGTTCTATGTAATGCTTATAAAATTGTACTGAATTAAACTAAACTGGTTTTGTTAGGTTGTTCGTGGAGGTGGAAAAATTGTACTGAAGGGTCTTTATTTTGGATTGGCTGCAAATCTTGTTGGGATGTTACCGTGAGTGTTCCTAACTCGAGATATTTTTCATCATCTCCTTCGCTAGAATGTTGGATAAATGTATCATGTATGCAACACTTTAGGGCTCTATTTTGGCTTGGACAAAAGTATTTATCAAATGTGATTTTGAATATGTATGTCATATGAGAAACTGAAAAAATCCATTAGTTTGTATAAAAGTATTTATCAGTGTCACTGCCGTTTTTTGTTAGTGTATATGAACCTACGAAGCAGAAATTGCTCAAGTCTCTCCCTGAACACCTCAATGCTTTAGCTTAATATTTAATGTTTTCATTTGTTTGTTTTTGCAATACACATCTCAGAGTTGTAATTTTGAATTGAGGTCAGTTAATTTGTGGGATATGACACTCGACCAGCTTCTGTTTTTCACAGTTGGTTTTGTGGATTCTAGTATGATTATAAATAGTAAATGAGAATTCACTGAACTGTTTTTGAAATTGGATTTGGTTTTTGGTTTCGGGCACTTCTTTTTAATATTTTTTTACCGCTATATTCTCGAATGATTTTTATGTTTTTTAATTACTATTATGTTTATATATTGTGGGTAGTTCTATTATAAACTTGAAGACAATAACTTTTTCTAGAATACGTTTTATATTGGGTGGTTCTGTGGTTACTATTATGTTTGTTGTTGTTTTTTTTTCATATTCTTCTTCTCTTCTGTAAGCTTTACTTGGTTACTATTGTGTTTGTTGTTCTTTTTTTTTTTTTTCTTATTCTTCTTCTCTTCTGTAAGCTTTACTTGGCTTATGGCAGGGATCATATCTTCCATTTTAGGAACTTTCATTGCTTTTGATTGAAACTTGTCTCTTATTTTAAAAAAAGTTGTTTGATATTGCAGTTAGCTAAACATATGTTGAATCCTATTTGTCTGTGTTAATATTATTCTTAGTTGATCTAGTTAGTTTTCACGATCCAGTTTGGTAAGTGGTTGGATGGAGGTGGGTAAATGTTAACACAAGTTTTGATATGTTTCCTAATTGGTGGATTTTCTTTGTTATTAAGCTAATTTAATGAGCAATTAAACTTTGGGATCTTCGAGGGCAAAAGAGATTTCATACAATGTGGGAGCAATATTGTCGTGGCGTGACTACAATTGTGTAAATATCCCAAGTCTCTAACCTTTTATCCATTTTAGCTAGACTTGTTACTTTAGCTTACAATATGTGGTTGATTGTTTATCTTTATTTATCTTTGCTTACTGCTCTCAAGGTCACAAGAAATTGGCTTTACTTGTTTTCTTCATGTAGGATGCTAGTATATGAATATGTGAACAATGGAAATCTAGAAAAGTGGTCGCATGGAGCCATATGCCAACAAGACACGCTTACTTGGAAGGCTTGCATGAAGGTGCTTCTTAGCACCGCTCAGGCGTAAGTCTTCAAACTATTGCACTTAAATTGCAACAATAGTTCTTATAGTTGTAAAACGTTTTTTTTTTTAAATTTAATGTTCTCCCAATTGTTGTGTGCATCCTAGTACATTAGGAACTAACATAAGTGATAAGACTAGAGGTATATAGCAAATGGTTAGCTCAAAGGCTTATTTAGCAGAGATGCAAATATATATACTTCATGCAAGCTTGCTTATTTCACTGATATTAGTTGGTTGGCTCTACAATGATGATTTTCTTAAAATGAACATGCTTCCTGTTTAGGCTCTACAACGAAGGAGGTGTTTGGTTTTGTTGGTACTTTTTCGATTCTGTTGAACTTGTTCCTTGTCTCGAATTAAGTATATACCAAATAGATTTCAGATTTTTCACCCTATCAAGGTTAGAATGCAAAGTATTTCATTATTTTCTGTTTATGGCATCTCTCTATCTGATATCGCGTTAATTTAAGAAGTTCTTGCATAGAGTTTTTGTAACTATGATCTTCTTTCATTTACTTGTGCTATTTTGGAGAGTTGTGTAACTCCACTGATTAGTTTCGATGTTAAGTTCATTTCTTTTAAGTGTAGGATGTGCTTGTTCTGGTTGTACATTAAGCTCATTTCTTTTAAGTGTAGGATTCCTTGTTTCGGTTGTAAGACGATGGATATTTATAGTTTTTCCGTCATTAAAAGTCTGTCACTTATTAGTTTTTCATGTTGGTTAGTTTTAAGATATTTAGGGTCTTGTTGTGAACCTGAAGTGTTGTGAGGCTGTAGTTGGGTGATTTTTTTTCATATAGAAGTGTGTTTCTCTTGTTTAACAGGTTTAAAAATTTTTGGGTTAGTCATATGTATGTCGTTATGCTGTCGAAATTTCTAGAGCAATCGGTTAGAATTAGGATAGATGCTTTAGTAATGTCTCTAGGTTAAGTATAGAAACCTAGAGCATTACAGATTCTCTGGAGGGGTTAAACTTGATATCTTGAAGTTTGTAAGCTTTTGGAGTTTATTGAGTTTTCTAACAATTTTTTCCGATACTCATCGAGATTGGTTTTTTTTTTTTTTGTATTTTATTGTTAACTAAATTTGTTTTTCTTAGGTTCTTCGAGTTGTTGGACATATGTTTGTTATGTGAGTTCTTGTTTTGGCGTTGTATCGAACCTAATTACAATTTGTTTTTCTTAGGTTCTTTAAGTTTGATGTACGAGCAAGATTATGGTGACAGGAATGAAAGCGGCATGTACGAGAATTTTTGTTTTTTAGTGTAAGTGTAGACTTTAAATCATAGGTGTTTAGTAATTTTGAGGCTTTTAAGTGTAAGTGTTTGTAATTTTATTTTTA ATGCTTATCGTGTCGTTAGAAAAGATACTCTACTGTAATATCGGAAATCCTCAGTCTCTTAGTCAGGAGCCAATAACTTTCTTCCGTGAGGTTGTTCGTGGAGGTGGAAAAATTGTACTGAAGGGTCTTTATTTTGGATTGGCTGCAAATCTTGTTGGGATGTTACCGATGCTAGTATATGAATATGTGAACAATGGAAATCTAGAAAAGTGGTCGCATGGAGCCATATGCCAACAAGACACGCTTACTTGGAAGGCTTGCATGAAGGTGCTTCTTAGCACCGCTCAGGCGTAA ATGCTTATCGTGTCGTTAGAAAAGATACTCTACTGTAATATCGGAAATCCTCAGTCTCTTAGTCAGGAGCCAATAACTTTCTTCCGTGAGGTTGTTCGTGGAGGTGGAAAAATTGTACTGAAGGGTCTTTATTTTGGATTGGCTGCAAATCTTGTTGGGATGTTACCGATGCTAGTATATGAATATGTGAACAATGGAAATCTAGAAAAGTGGTCGCATGGAGCCATATGCCAACAAGACACGCTTACTTGGAAGGCTTGCATGAAGGTGCTTCTTAGCACCGCTCAGGCGTAA MLIVSLEKILYCNIGNPQSLSQEPITFFREVVRGGGKIVLKGLYFGLAANLVGMLPMLVYEYVNNGNLEKWSHGAICQQDTLTWKACMKVLLSTAQA Homology
BLAST of Spg028529 vs. NCBI nr
Match: XP_004145735.1 (probable receptor-like protein kinase At2g42960 [Cucumis sativus] >KGN46827.1 hypothetical protein Csa_020998 [Cucumis sativus]) HSP 1 Score: 75.5 bits (184), Expect = 2.9e-10 Identity = 40/70 (57.14%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Spg028529 vs. NCBI nr
Match: XP_022149677.1 (probable receptor-like protein kinase At2g42960 [Momordica charantia]) HSP 1 Score: 75.5 bits (184), Expect = 2.9e-10 Identity = 40/70 (57.14%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Spg028529 vs. NCBI nr
Match: XP_038901517.1 (probable receptor-like protein kinase At2g42960 [Benincasa hispida]) HSP 1 Score: 75.5 bits (184), Expect = 2.9e-10 Identity = 40/70 (57.14%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Spg028529 vs. NCBI nr
Match: TQD72665.1 (hypothetical protein C1H46_041799 [Malus baccata]) HSP 1 Score: 74.7 bits (182), Expect = 4.9e-10 Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Spg028529 vs. NCBI nr
Match: XP_008342350.1 (probable receptor-like protein kinase At2g42960 [Malus domestica]) HSP 1 Score: 74.7 bits (182), Expect = 4.9e-10 Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Spg028529 vs. ExPASy Swiss-Prot
Match: Q9SJG2 (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 3.9e-10 Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of Spg028529 vs. ExPASy Swiss-Prot
Match: Q9LRP3 (Probable receptor-like protein kinase At3g17420 OS=Arabidopsis thaliana OX=3702 GN=At3g17420 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 7.3e-09 Identity = 38/94 (40.43%), Postives = 54/94 (57.45%), Query Frame = 0
BLAST of Spg028529 vs. ExPASy Swiss-Prot
Match: Q8LEB6 (Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana OX=3702 GN=At5g18500 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-07 Identity = 32/70 (45.71%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of Spg028529 vs. ExPASy Swiss-Prot
Match: Q6NKZ9 (Probable receptor-like serine/threonine-protein kinase At4g34500 OS=Arabidopsis thaliana OX=3702 GN=At4g34500 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.2e-06 Identity = 29/71 (40.85%), Postives = 39/71 (54.93%), Query Frame = 0
BLAST of Spg028529 vs. ExPASy Swiss-Prot
Match: P52894 (Alanine aminotransferase 2 OS=Hordeum vulgare OX=4513 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 5.8e-06 Identity = 20/26 (76.92%), Postives = 25/26 (96.15%), Query Frame = 0
BLAST of Spg028529 vs. ExPASy TrEMBL
Match: A0A0A0KEI6 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G139760 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10 Identity = 40/70 (57.14%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Spg028529 vs. ExPASy TrEMBL
Match: A0A6J1D8M9 (probable receptor-like protein kinase At2g42960 OS=Momordica charantia OX=3673 GN=LOC111018046 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10 Identity = 40/70 (57.14%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Spg028529 vs. ExPASy TrEMBL
Match: A0A6A2XBN8 (Putative receptor-like protein kinase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00117017pilonHSYRG00359 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.4e-10 Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Spg028529 vs. ExPASy TrEMBL
Match: A0A498H8L2 (Protein kinase domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_027863 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.4e-10 Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Spg028529 vs. ExPASy TrEMBL
Match: A0A540KEK6 (Protein kinase domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_041799 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.4e-10 Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Spg028529 vs. TAIR 10
Match: AT3G59110.1 (Protein kinase superfamily protein ) HSP 1 Score: 69.7 bits (169), Expect = 1.5e-12 Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Spg028529 vs. TAIR 10
Match: AT2G42960.1 (Protein kinase superfamily protein ) HSP 1 Score: 65.5 bits (158), Expect = 2.7e-11 Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of Spg028529 vs. TAIR 10
Match: AT1G56720.1 (Protein kinase superfamily protein ) HSP 1 Score: 63.2 bits (152), Expect = 1.4e-10 Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of Spg028529 vs. TAIR 10
Match: AT1G56720.2 (Protein kinase superfamily protein ) HSP 1 Score: 63.2 bits (152), Expect = 1.4e-10 Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of Spg028529 vs. TAIR 10
Match: AT1G56720.3 (Protein kinase superfamily protein ) HSP 1 Score: 63.2 bits (152), Expect = 1.4e-10 Identity = 35/70 (50.00%), Postives = 44/70 (62.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|