Spg028521 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg028521
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag protease polyprotein
Locationscaffold7: 11947226 .. 11949632 (+)
RNA-Seq ExpressionSpg028521
SyntenySpg028521
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAGGTACTTTGTTCAGAAGAGAAGAAGACAAACGCTCCTGTCTTGCGCTCTGTTCCCTTATCTCGACGCAAGAAGGGTGATTCGCCATTTGCAGAATGCTCCAATAATTTAAGAGTTGGCGACATTGAAATTTTGAAAGAGAGTTTTATCACATCTCTTACAAAGATATCCAAACAAGAGGTCAAAGACAAACAAGTAGAAGCAACTCTGCCTGATAAACGAACAGAAGAGGGGTTTGATCCTAAAGCATACAAACTCTTGGCAAAGGCAGGTTATGATTTCACAACGCATACTGAGTTTAAAAGTTTACGAATCTTTGACCAAAGGCCTGAACTTTCCTCAACACAGAAGAAGCTTCAAAAAGAGGGATATGATATACCCATTTCAAGAGCTGGTCTTGGATATAAATCTCCTGAGCCGGTTTGAATCACAAGAAAAGGGAAAGCGAAAGTTGCAGATACGCTTGACATTACAGTGGAAGAAATCGATGATTCCGAACAGGCTAAAGAAAACATAGATCATAGGACTTCTGCATTTGATCGCATTGGACCGTCGGTTACACGATCCTCGGTTTTTCAAAGACTGAGTACAGCTGCAATAGAAGATGAAAGTCAACATCCAACTTATGGCTCCACACGACCTTCAGCTTTCCAAAGATTAAGTATGGCTTCTGAAGAAAAAGAAAATGTGCATTCAACTCCTACCACACGGCTATCAGCTTTCCAAAGGTTGAGTGTAGCCACAAAAAGAAGTAAAGAACGGTCCCCTATATCAGTTTCTAACATAACAGAAACTCCAATCAAGACAAAGGGTGATGAGAAAATTCGTAGCGTTGTCCCCTCACGAATGAAGAGAAAATTGCTTGTTTCTGTAAATACAGAGGGTTCGTTAAAAATAAAGCGACATGATATTATTATCACAAGACCGAAAGAGAAAAGCCCTGATGATGAAAAAGACACAGTCGTATGCTACCACATCACCACAGAGGAAGAAACGGACCCTGAAACGTCTGAAGAAGATGAAAGTTCCTTAAAAAAAATTCTATGCATGAAATGTAAATACTCCTTATTGTAAGAGTCTAAACTACATGATACTCCTGACCCGCATGAGTTAAAAAGGTGAACGGCACAAAAAAAATCAAATTTGTATATTGAACTACGTTATGACTTGATCCCTTCCCACTTGAAGGGTACGTAGGCAACTTAAGTTCAGTCAAAGCAATAAAAAAATTGTGTCGCAGATAAAGCTTCGAACTTTTATTATGGCATAGACAAACGAAGCATAATGTTTGATACAATGCATTAAAAAAAAGTCTTACAGGAGACAAGTCTTAAGGTAAGTAAAAAAGAATTTTGGTTGTGAATGGAATCTCAACACTTTTATTTATAGCATGAATGAATAAATGAACAAATATTATTCGACAAACATCAATTGATCAATTAAAAAATGGGACTTTACATCTAATTTGGAAAACAAATGGGGGCAATCAAATCAAATCATCCACTTGAAGTTCCTCAACTCTTCACGTATGTCCTCTAAGTTTTTACGAGCCATGGCTAAAGACTTAACATCTTCATCAGTCATGACAGAGGCACACTCAATATTGGGGATCTCTTCACGGACTTTGGTAACCTCGAGTCTCTATTGCTTCAAAGTCTTCTCCTCCATCACAAATCAAATTGGAAAGCCTCTCATGCTCGACTAACGTTGTCTCAAGTTTGGCCTCTAATTCCTTTATCTCCAAGGATGATCGTGCAAGCTGTTGTTCGAGTGTGTCATTCAAGGCTTCATTTGTCTCAAAGTAAAAGTTCAAGCTTTCCTCGTTTCAAATTGCAGTTCGAGTTTTCCTCGCTTCGAGTACTCCAAGTTCAAGCTTAGAGTTCAAGTTCAAGTTCGAGTTTTCATAACTTCAAGTACTCTAAGTTGAAGTTCAGGGTTTCGCTCGTTTCAAGTTCAAGTTTGAGCTTTTCTCATTTCAAGTACTTCAAGTTCAAGCTTTCATCGCTTCAAGTACTCTAAGTTCAAGTTCGAGCATTCCTCACTGCAAGTACTTCAAGTTCCAGTTAAATCTTCGCTCATTTCAAGTTCAAGTTCGAGCTTTCCTCACTTCAAGTACTCTAAGTTCAAGTTCGGGGGCTTCGCTTGTTTCAACTTCAAGTTCGGGCTTTCCTCACTTCAAGTACTCTAAGTTCAAGTTCAGGGGCTTCGCTCGTTTCAAGTTCAAGTTCGAGCTTTCCTCACTTCAAGTACTTCAAGTTCAAGCTTTCATCGCTTCAAGTGCTTTAAGTTCAAGTTCAGGGCTTCGCTTGTTTCGAGTTCAAGTTCGAGCTTTCCCCACTGCAAGTACTCCAAGTTCTAGTTCAATCTTTGCTCATTTCAAGTTCAAGTTCAAGCTTTCATAA

mRNA sequence

ATGAGAAGAAAAGGGAAAGCGAAAGTTGCAGATACGCTTGACATTACAGTGGAAGAAATCGATGATTCCGAACAGGCTAAAGAAAACATAGATCATAGGACTTCTGCATTTGATCGCATTGGACCGTCGGTTACACGATCCTCGGTTTTTCAAAGACTGAGTACAGCTGCAATAGAAGATGAAAGTCAACATCCAACTTATGGCTCCACACGACCTTCAGCTTTCCAAAGATTAAGTATGGCTTCTGAAGAAAAAGAAAATGTGCATTCAACTCCTACCACACGGCTATCAGCTTTCCAAAGGTTGAGTGTAGCCACAAAAAGAAGTAAAGAACGGTCCCCTATATCAGTTTCTAACATAACAGAAACTCCAATCAAGACAAAGGGTGATGAGAAAATTCGTAGCGTTGTCCCCTCACGAATGAAGAGAAAATTGCTTGTTTCTGTAAATACAGAGGGTTCGTTAAAAATAAAGCGACATGATATTATTATCACAAGACCGAAAGAGAAAAGCCCTGATGATGAAAAAGACACAGTCTCTTACAGGAGACAAGTCTTAAGAGGCACACTCAATATTGGGGATCTCTTCACGGACTTTGGTAACCTCGAGTCTCTATTGCTTCAAAGTCTTCTCCTCCATCACAAATCAAATTGGAAAGCCTCTCATGCTCGACTAACGTTGTCTCAAGTTTGGCCTCTAATTCCTTTATCTCCAAGGATGATCGTGCAAGCTGTTGTTCGAGGTTTCGCTCGTTTCAAGTTCAAGTTTGAGCTTTTCTCATTTCAAGTACTTCAAGTTCAAGCTTTCATCGCTTCAAGTACTCTAAGTTCAAGTTCGAGCATTCCTCACTGCAAGTACTTCAAGTTCCAGTTAAATCTTCGCTCATTTCAAGTTCAAGTTCGAGCTTTCCTCACTTCAAGTACTCTAAGTTCAAGTTCGGGGGCTTCGCTTGTTTCAACTTCAAGTTCGGGCTTTCCTCACTTCAAGTACTCTAAGTTCAAGTTCAGGGGCTTCGCTCGTTTCAAGTTCAAGTTCGAGCTTTCCTCACTTCAAGTACTTCAAGTTCAAGCTTTCATCGCTTCAAGTGCTTTAAGTTCAAGTTCAGGGCTTCGCTTGTTTCGAGTTCAAGTTCGAGCTTTCCCCACTGCAAGTACTCCAAGTTCTAGTTCAATCTTTGCTCATTTCAAGTTCAAGTTCAAGCTTTCATAA

Coding sequence (CDS)

ATGAGAAGAAAAGGGAAAGCGAAAGTTGCAGATACGCTTGACATTACAGTGGAAGAAATCGATGATTCCGAACAGGCTAAAGAAAACATAGATCATAGGACTTCTGCATTTGATCGCATTGGACCGTCGGTTACACGATCCTCGGTTTTTCAAAGACTGAGTACAGCTGCAATAGAAGATGAAAGTCAACATCCAACTTATGGCTCCACACGACCTTCAGCTTTCCAAAGATTAAGTATGGCTTCTGAAGAAAAAGAAAATGTGCATTCAACTCCTACCACACGGCTATCAGCTTTCCAAAGGTTGAGTGTAGCCACAAAAAGAAGTAAAGAACGGTCCCCTATATCAGTTTCTAACATAACAGAAACTCCAATCAAGACAAAGGGTGATGAGAAAATTCGTAGCGTTGTCCCCTCACGAATGAAGAGAAAATTGCTTGTTTCTGTAAATACAGAGGGTTCGTTAAAAATAAAGCGACATGATATTATTATCACAAGACCGAAAGAGAAAAGCCCTGATGATGAAAAAGACACAGTCTCTTACAGGAGACAAGTCTTAAGAGGCACACTCAATATTGGGGATCTCTTCACGGACTTTGGTAACCTCGAGTCTCTATTGCTTCAAAGTCTTCTCCTCCATCACAAATCAAATTGGAAAGCCTCTCATGCTCGACTAACGTTGTCTCAAGTTTGGCCTCTAATTCCTTTATCTCCAAGGATGATCGTGCAAGCTGTTGTTCGAGGTTTCGCTCGTTTCAAGTTCAAGTTTGAGCTTTTCTCATTTCAAGTACTTCAAGTTCAAGCTTTCATCGCTTCAAGTACTCTAAGTTCAAGTTCGAGCATTCCTCACTGCAAGTACTTCAAGTTCCAGTTAAATCTTCGCTCATTTCAAGTTCAAGTTCGAGCTTTCCTCACTTCAAGTACTCTAAGTTCAAGTTCGGGGGCTTCGCTTGTTTCAACTTCAAGTTCGGGCTTTCCTCACTTCAAGTACTCTAAGTTCAAGTTCAGGGGCTTCGCTCGTTTCAAGTTCAAGTTCGAGCTTTCCTCACTTCAAGTACTTCAAGTTCAAGCTTTCATCGCTTCAAGTGCTTTAAGTTCAAGTTCAGGGCTTCGCTTGTTTCGAGTTCAAGTTCGAGCTTTCCCCACTGCAAGTACTCCAAGTTCTAGTTCAATCTTTGCTCATTTCAAGTTCAAGTTCAAGCTTTCATAA

Protein sequence

MRRKGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLSVATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLESLLLQSLLLHHKSNWKASHARLTLSQVWPLIPLSPRMIVQAVVRGFARFKFKFELFSFQVLQVQAFIASSTLSSSSSIPHCKYFKFQLNLRSFQVQVRAFLTSSTLSSSSGASLVSTSSSGFPHFKYSKFKFRGFARFKFKFELSSLQVLQVQAFIASSALSSSSGLRLFRVQVRAFPTASTPSSSSIFAHFKFKFKLS
Homology
[Close]
BLAST of Spg028521 vs. NCBI nr
Match: TYJ98225.1 (uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 1.6e-38
Identity = 100/205 (48.78%), Postives = 136/205 (66.34%), Query Frame = 0 

Query: 4    KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQ 63
            KGKAKVA+T  ITVEE  DSE+ K+    R+S FDRI  S  R SVFQR+ST+  +D +Q
Sbjct: 1065 KGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQ 1124

Query: 64   HPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLSVATKRSKERSPISVSNITET 123
              T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLSV+  R ++++ +SVSN +  
Sbjct: 1125 VSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSNKSSL 1184

Query: 124  PIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRR 183
                 GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D      
Sbjct: 1185 ---VTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDNEPEDEPDVAGCYH 1244

Query: 184  QVLRGTLNIGDLFTDFGNLESLLLQ 209
              +  T +  D+F +      L L+
Sbjct: 1245 VTIEETSD-HDIFEEDAEAAPLSLE 1265

[Close]
BLAST of Spg028521 vs. NCBI nr
Match: KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 1.6e-38
Identity = 100/205 (48.78%), Postives = 136/205 (66.34%), Query Frame = 0 

Query: 4    KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQ 63
            KGKAKVA+T  ITVEE  DSE+ K+    R+S FDRI  S  R SVFQR+ST+  +D +Q
Sbjct: 1087 KGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQ 1146

Query: 64   HPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLSVATKRSKERSPISVSNITET 123
              T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLSV+  R ++++ +SVSN +  
Sbjct: 1147 VSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSNKSSL 1206

Query: 124  PIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRR 183
                 GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D      
Sbjct: 1207 ---VTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDNEPEDEPDVAGCYH 1266

Query: 184  QVLRGTLNIGDLFTDFGNLESLLLQ 209
              +  T +  D+F +      L L+
Sbjct: 1267 VTIEETSD-HDIFEEDAEAAPLSLE 1287

[Close]
BLAST of Spg028521 vs. NCBI nr
Match: TYK06199.1 (uncharacterized protein E5676_scaffold287G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 1.6e-38
Identity = 99/205 (48.29%), Postives = 136/205 (66.34%), Query Frame = 0 

Query: 4    KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQ 63
            KGK KVA+T  ITVEE  DSE+ K++   R+S FDRI  S  R SVFQR+ST+  +D +Q
Sbjct: 842  KGKVKVANTCHITVEESKDSEEGKKDRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQ 901

Query: 64   HPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLSVATKRSKERSPISVSNITET 123
              T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLSV+  R ++++ +SVSN +  
Sbjct: 902  VSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSNKSSL 961

Query: 124  PIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRR 183
                 GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D      
Sbjct: 962  ---VTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDNEPEDEPDVAGCYH 1021

Query: 184  QVLRGTLNIGDLFTDFGNLESLLLQ 209
              +  T +  D+F +      L L+
Sbjct: 1022 VTIEETSD-HDIFEEDAEAAPLSLE 1042

[Close]
BLAST of Spg028521 vs. NCBI nr
Match: TYK18071.1 (uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 1.6e-38
Identity = 100/205 (48.78%), Postives = 136/205 (66.34%), Query Frame = 0 

Query: 4    KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQ 63
            KGKAKVA+T  ITVEE  DSE+ K+    R+S FDRI  S  R SVFQR+ST+  +D +Q
Sbjct: 1017 KGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQ 1076

Query: 64   HPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLSVATKRSKERSPISVSNITET 123
              T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLSV+  R ++++ +SVSN +  
Sbjct: 1077 VSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSNKSSL 1136

Query: 124  PIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRR 183
                 GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D      
Sbjct: 1137 ---VTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDNEPEDEPDVAGCYH 1196

Query: 184  QVLRGTLNIGDLFTDFGNLESLLLQ 209
              +  T +  D+F +      L L+
Sbjct: 1197 VTIEETSD-HDIFEEDAEAAPLSLE 1217

[Close]
BLAST of Spg028521 vs. NCBI nr
Match: KAA0031753.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 171.4 bits (433), Expect = 1.6e-38
Identity = 95/174 (54.60%), Postives = 127/174 (72.99%), Query Frame = 0 

Query: 4   KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQ 63
           KGKAKVA+T  ITVEE  DSE+ K++   R+S FDRI  S  R SVFQR+ST+  +D +Q
Sbjct: 407 KGKAKVANTCHITVEESKDSEEGKKDRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQ 466

Query: 64  HPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLSVATKRSKERSPISVSNITET 123
             T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLSV+  R ++++ +SVSN +  
Sbjct: 467 VSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSNKSSL 526

Query: 124 PIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKD 178
                GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D
Sbjct: 527 ---VTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDNEPEDEVD 577

[Close]
BLAST of Spg028521 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.7e-39
Identity = 100/205 (48.78%), Postives = 136/205 (66.34%), Query Frame = 0 

Query: 4    KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQ 63
            KGKAKVA+T  ITVEE  DSE+ K+    R+S FDRI  S  R SVFQR+ST+  +D +Q
Sbjct: 1087 KGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQ 1146

Query: 64   HPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLSVATKRSKERSPISVSNITET 123
              T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLSV+  R ++++ +SVSN +  
Sbjct: 1147 VSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSNKSSL 1206

Query: 124  PIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRR 183
                 GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D      
Sbjct: 1207 ---VTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDNEPEDEPDVAGCYH 1266

Query: 184  QVLRGTLNIGDLFTDFGNLESLLLQ 209
              +  T +  D+F +      L L+
Sbjct: 1267 VTIEETSD-HDIFEEDAEAAPLSLE 1287

[Close]
BLAST of Spg028521 vs. ExPASy TrEMBL
Match: A0A5A7SND9 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00160 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.7e-39
Identity = 95/174 (54.60%), Postives = 127/174 (72.99%), Query Frame = 0 

Query: 4   KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQ 63
           KGKAKVA+T  ITVEE  DSE+ K++   R+S FDRI  S  R SVFQR+ST+  +D +Q
Sbjct: 407 KGKAKVANTCHITVEESKDSEEGKKDRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQ 466

Query: 64  HPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLSVATKRSKERSPISVSNITET 123
             T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLSV+  R ++++ +SVSN +  
Sbjct: 467 VSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSNKSSL 526

Query: 124 PIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKD 178
                GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D
Sbjct: 527 ---VTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDNEPEDEVD 577

[Close]
BLAST of Spg028521 vs. ExPASy TrEMBL
Match: A0A5D3BIH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001270 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.7e-39
Identity = 100/205 (48.78%), Postives = 136/205 (66.34%), Query Frame = 0 

Query: 4    KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQ 63
            KGKAKVA+T  ITVEE  DSE+ K+    R+S FDRI  S  R SVFQR+ST+  +D +Q
Sbjct: 1065 KGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQ 1124

Query: 64   HPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLSVATKRSKERSPISVSNITET 123
              T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLSV+  R ++++ +SVSN +  
Sbjct: 1125 VSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSNKSSL 1184

Query: 124  PIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRR 183
                 GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D      
Sbjct: 1185 ---VTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDNEPEDEPDVAGCYH 1244

Query: 184  QVLRGTLNIGDLFTDFGNLESLLLQ 209
              +  T +  D+F +      L L+
Sbjct: 1245 VTIEETSD-HDIFEEDAEAAPLSLE 1265

[Close]
BLAST of Spg028521 vs. ExPASy TrEMBL
Match: A0A5D3D1E5 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G004020 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.7e-39
Identity = 100/205 (48.78%), Postives = 136/205 (66.34%), Query Frame = 0 

Query: 4    KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQ 63
            KGKAKVA+T  ITVEE  DSE+ K+    R+S FDRI  S  R SVFQR+ST+  +D +Q
Sbjct: 1017 KGKAKVANTCHITVEESKDSEEGKKVRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQ 1076

Query: 64   HPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLSVATKRSKERSPISVSNITET 123
              T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLSV+  R ++++ +SVSN +  
Sbjct: 1077 VSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSNKSSL 1136

Query: 124  PIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRR 183
                 GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D      
Sbjct: 1137 ---VTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDNEPEDEPDVAGCYH 1196

Query: 184  QVLRGTLNIGDLFTDFGNLESLLLQ 209
              +  T +  D+F +      L L+
Sbjct: 1197 VTIEETSD-HDIFEEDAEAAPLSLE 1217

[Close]
BLAST of Spg028521 vs. ExPASy TrEMBL
Match: A0A5D3C783 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00570 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 7.7e-39
Identity = 99/205 (48.29%), Postives = 136/205 (66.34%), Query Frame = 0 

Query: 4    KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQ 63
            KGK KVA+T  ITVEE  DSE+ K++   R+S FDRI  S  R SVFQR+ST+  +D +Q
Sbjct: 842  KGKVKVANTCHITVEESKDSEEGKKDRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQ 901

Query: 64   HPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLSVATKRSKERSPISVSNITET 123
              T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLSV+  R ++++ +SVSN +  
Sbjct: 902  VSTCSSTRLSAFQRLNTSAKKVRSISPTPTTRKSAFKRLSVSVTRDQKKASMSVSNKSSL 961

Query: 124  PIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRR 183
                 GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D      
Sbjct: 962  ---VTGDEEIRSAFPSRMKRKMFVSVNTEGSLKVKRHDVVFTRPEDNEPEDEPDVAGCYH 1021

Query: 184  QVLRGTLNIGDLFTDFGNLESLLLQ 209
              +  T +  D+F +      L L+
Sbjct: 1022 VTIEETSD-HDIFEEDAEAAPLSLE 1042

The following BLAST results are available for this feature:
BLAST of Spg028521 vs. NCBI nr
Match NameE-valueIdentityDescription
TYJ98225.11.6e-3848.78uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa][more]
KAA0047477.11.6e-3848.78uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa][more]
TYK06199.11.6e-3848.29uncharacterized protein E5676_scaffold287G00570 [Cucumis melo var. makuwa][more]
TYK18071.11.6e-3848.78uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa][more]
KAA0031753.11.6e-3854.60gag protease polyprotein [Cucumis melo var. makuwa][more]
BLAST of Spg028521 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg028521 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TZU97.7e-3948.78Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940... [more]
A0A5A7SND97.7e-3954.60Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
A0A5D3BIH87.7e-3948.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D1E57.7e-3948.78Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00402... [more]
A0A5D3C7837.7e-3948.29Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00570... [more]
BLAST of Spg028521 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg028521.1Spg028521.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
molecular_function GO:0140640 catalytic activity, acting on a nucleic acid
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003676 nucleic acid binding