Spg028436 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg028436
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold7: 13639486 .. 13640105 (-)
RNA-Seq ExpressionSpg028436
SyntenySpg028436
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAATCGATGTCGATCAATCGATGATCACCCCTACCGAGGACAACGTACCTGGTAGTGGGAAGAGTCCATCCATCGAAAAACATGATGACGCGACCGGGGAACGTGACACCGATGACGACATAGGAGTCAGTGGGAAGGTGGATGACATCGTGGTACCTAAACCGGAGGTAAGTCATCTTTGAGTTTCAAAATTATGTAGTTTAGGGCTTACATAATTATATTTATCTTACTGTGTAGCTTGTTGAGTTTGAGGACGGGAAGGAGGACAAAGTGGACGTAACGGGACAGGACGAACCCATCTTGCGTCGTGAAAAGCGTGTCTGTCAGATATCTTGGAAACTATGATCTCCATGGACTGATATCATACTTGATGGTAAACAAAAGAAGCCGAAGATGAATGACCCTACGCGTTCCATTCCCGATGAGTTTGAACAATCGTTTTAGAAATGGTTGGACGACCCTGCATCCGATGGATCAGAACGAAAGGTCGTGTATTCATACAAGAACATGTTCTGGTTTAAAAATTTGATAAGTTCGTCATATTGGACAAGCGATGAGGGACACTAAAACCCATTACATGTTATTTTCATGCATGCATATAAACAATAAATAGTGGAG

mRNA sequence

ATGATCACCCCTACCGAGGACAACGTACCTGGTAGTGGGAAGAGTCCATCCATCGAAAAACATGATGACGCGACCGGGGAACGTGACACCGATGACGACATAGGAGTCAGTGGGAAGGTGGATGACATCGTGGTACCTAAACCGGAGCTTGTTGAGTTTGAGGACGGGAAGGAGGACAAAGTGGACGTAACGGGACAGGACGAACCCATCTTGCGTCGTGAAAAGCGTGTCTGTCAGATATCTTGGAAACTATGA

Coding sequence (CDS)

ATGATCACCCCTACCGAGGACAACGTACCTGGTAGTGGGAAGAGTCCATCCATCGAAAAACATGATGACGCGACCGGGGAACGTGACACCGATGACGACATAGGAGTCAGTGGGAAGGTGGATGACATCGTGGTACCTAAACCGGAGCTTGTTGAGTTTGAGGACGGGAAGGAGGACAAAGTGGACGTAACGGGACAGGACGAACCCATCTTGCGTCGTGAAAAGCGTGTCTGTCAGATATCTTGGAAACTATGA

Protein sequence

MITPTEDNVPGSGKSPSIEKHDDATGERDTDDDIGVSGKVDDIVVPKPELVEFEDGKEDKVDVTGQDEPILRREKRVCQISWKL
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg028436.1Spg028436.1mRNA