Spg027647 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg027647
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon protein
Locationscaffold6: 38009824 .. 38010635 (+)
RNA-Seq ExpressionSpg027647
SyntenySpg027647
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAGGGCTAGTTATCTAACACGATTACGTTGGATGTTGAGAGAGAAAATTTCAGGGTGTACTATTGACTTGACAACGACGATAGATTGTAAAGTCAAATCCCTAAAGCAGCAGTATGGTGCAATTGCCGAGATGTTGGGCCTGGGCTGTAGTGGCTTCGGGTGGAATGAAGAGTACAAATGCATGGAGGCTGAGAAAGATGTGTTCGATGCGTGGATCAAGGTAAGGTTATTGTTCACTCATAAACAAAGTTGTCTACAATGTATGCTAATATCCTTTCTTACACATGCAGTCACACTCAATTGCGAAAGGACTCCTCAACAAGTCATTCCCTTGACTTGACTTTCGTGTTTGGTAAAGATCGAGCTACCGAAGGGGCTACACAAGTACCTGTTCACATGGCCTCGAGGGCTCATGTGGAAGAAGAGGGCGATGTCAATATGGGAGCATCACCAAGGTATTATGTCCCAGTGCCACTCGTGTTCAATGTCGCTATCGAGGCCGAGTCAACGCGTGCCCATAACCCCTACCAAGAGACCGAGTGCAATCGGGACATCACAGGGGATGAAGAGGAAGAGGGTGTCATACTAGGTAGAGGCCCTCGACATCATGAGAGCAGCCATGGAATTCTAGACGACCCAGATGATGAGGATTGTAGACTGCTACTAGGGCTACCAGAGCTAACTGATGATGAGATGGTAGACCTCATGAATATTTTGTTCCTAGACTCCAAGACAAGCACGTTCTTATCCATACCACTTGCACTGAAATTTCAATTCTATAGATGTCTGTTGAACGAGACTAGATGA

mRNA sequence

ATGTTCAGGGCTAGTTATCTAACACGATTACGTTGGATGTTGAGAGAGAAAATTTCAGGGTGTACTATTGACTTGACAACGACGATAGATTGTAAAGTCAAATCCCTAAAGCAGCAGTATGGTGCAATTGCCGAGATGTTGGGCCTGGGCTGTAGTGGCTTCGGGTGGAATGAAGAGTACAAATGCATGGAGGCTGAGAAAGATGTGTTCGATGCGTGGATCAAGGTAAGTCACACTCAATTGCGAAAGGACTCCTCAACAAGTCATTCCCTTGACTTGACTTTCGTGTTTGGTAAAGATCGAGCTACCGAAGGGGCTACACAAGTACCTGTTCACATGGCCTCGAGGGCTCATGTGGAAGAAGAGGGCGATGTCAATATGGGAGCATCACCAAGGTATTATGTCCCAGTGCCACTCGTGTTCAATGTCGCTATCGAGGCCGAGTCAACGCGTGCCCATAACCCCTACCAAGAGACCGAGTGCAATCGGGACATCACAGGGGATGAAGAGGAAGAGGGTGTCATACTAGGTAGAGGCCCTCGACATCATGAGAGCAGCCATGGAATTCTAGACGACCCAGATGATGAGGATTGTAGACTGCTACTAGGGCTACCAGAGCTAACTGATGATGAGATGGTAGACCTCATGAATATTTTGTTCCTAGACTCCAAGACAAGCACGTTCTTATCCATACCACTTGCACTGAAATTTCAATTCTATAGATGTCTGTTGAACGAGACTAGATGA

Coding sequence (CDS)

ATGTTCAGGGCTAGTTATCTAACACGATTACGTTGGATGTTGAGAGAGAAAATTTCAGGGTGTACTATTGACTTGACAACGACGATAGATTGTAAAGTCAAATCCCTAAAGCAGCAGTATGGTGCAATTGCCGAGATGTTGGGCCTGGGCTGTAGTGGCTTCGGGTGGAATGAAGAGTACAAATGCATGGAGGCTGAGAAAGATGTGTTCGATGCGTGGATCAAGGTAAGTCACACTCAATTGCGAAAGGACTCCTCAACAAGTCATTCCCTTGACTTGACTTTCGTGTTTGGTAAAGATCGAGCTACCGAAGGGGCTACACAAGTACCTGTTCACATGGCCTCGAGGGCTCATGTGGAAGAAGAGGGCGATGTCAATATGGGAGCATCACCAAGGTATTATGTCCCAGTGCCACTCGTGTTCAATGTCGCTATCGAGGCCGAGTCAACGCGTGCCCATAACCCCTACCAAGAGACCGAGTGCAATCGGGACATCACAGGGGATGAAGAGGAAGAGGGTGTCATACTAGGTAGAGGCCCTCGACATCATGAGAGCAGCCATGGAATTCTAGACGACCCAGATGATGAGGATTGTAGACTGCTACTAGGGCTACCAGAGCTAACTGATGATGAGATGGTAGACCTCATGAATATTTTGTTCCTAGACTCCAAGACAAGCACGTTCTTATCCATACCACTTGCACTGAAATTTCAATTCTATAGATGTCTGTTGAACGAGACTAGATGA

Protein sequence

MFRASYLTRLRWMLREKISGCTIDLTTTIDCKVKSLKQQYGAIAEMLGLGCSGFGWNEEYKCMEAEKDVFDAWIKVSHTQLRKDSSTSHSLDLTFVFGKDRATEGATQVPVHMASRAHVEEEGDVNMGASPRYYVPVPLVFNVAIEAESTRAHNPYQETECNRDITGDEEEEGVILGRGPRHHESSHGILDDPDDEDCRLLLGLPELTDDEMVDLMNILFLDSKTSTFLSIPLALKFQFYRCLLNETR
Homology
BLAST of Spg027647 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 120.2 bits (300), Expect = 2.6e-23
Identity = 91/264 (34.47%), Postives = 131/264 (49.62%), Query Frame = 0

Query: 2   FRASYLTRLRWMLREKISGCTIDLTTTIDCKVKSLKQQYGAIAEMLGLGCSGFGWNEEYK 61
           F+  YL +L+ M+ EK+ G  I  ++TIDC VKSLK+ Y AIAEM G  CSGFGWNEE++
Sbjct: 40  FQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQ 99

Query: 62  CMEAEKDVFDAWIKVSHTQLR--KDSSTSHSLDLTFVFGKDRATEGATQVPVHMASRAHV 121
           C+ AE+D+FD+WIK SH   +     S  +  DL++VFGKDRAT   ++   ++ S    
Sbjct: 100 CIIAERDLFDSWIK-SHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSN 159

Query: 122 EEEGDVNMGASPRYYVPVPLVFNVAI---EAESTRAHNPYQETEC---NRDITGDEEEEG 181
                + +G S    +P      V +   E    RA    +   C   ++   G E  E 
Sbjct: 160 MFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYET 219

Query: 182 VILGRGPRH--HESSHGILDDPDDEDC----------RLLLGLPELTDDEMVDLMNILFL 241
           V + R      +E    I D P ++            + L  +P+L   +   LM ILF 
Sbjct: 220 VEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFR 279

Query: 242 DSKT-STFLSIPLALKFQFYRCLL 245
             +    FLSIP  LK ++   LL
Sbjct: 280 SLEAIEGFLSIPTELKLEYCNILL 302

BLAST of Spg027647 vs. NCBI nr
Match: KAA0050293.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-21
Identity = 65/176 (36.93%), Postives = 101/176 (57.39%), Query Frame = 0

Query: 2   FRASYLTRLRWMLREKISGCTIDLTTTIDCKVKSLKQQYGAIAEMLGLGCSGFGWNEEYK 61
           FR  YL +L  M+ +K+ GC +  TT IDC++K+LK+ + AIAEM GL CSGFGWN+E K
Sbjct: 40  FRPGYLAQLVRMMAKKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGLACSGFGWNDEEK 99

Query: 62  CMEAEKDVFDAWIKVSHTQLR--KDSSTSHSLDLTFVFGKDRATEGATQVPVHMASRAHV 121
           C+ AEK++FD W++ SH + +   +    +  +LT+VFG+DRAT    +    + S    
Sbjct: 100 CIVAEKELFDNWVR-SHPEAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPG 159

Query: 122 EEEGDVNMGASPRYYVPVPLVFN--VAIEAESTRAHNPYQETECNRDITGDEEEEG 174
           +     +MG     +   PLV++  V I  +  RA  P + +E     +G + + G
Sbjct: 160 DGYDRFDMGDGNEDF---PLVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRG 211

BLAST of Spg027647 vs. NCBI nr
Match: XP_038880837.1 (uncharacterized protein LOC120072528 [Benincasa hispida])

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-21
Identity = 58/131 (44.27%), Postives = 87/131 (66.41%), Query Frame = 0

Query: 1   MFRASYLTRLRWMLREKISGCTIDLTTTIDCKVKSLKQQYGAIAEMLGLGCSGFGWNEEY 60
           MFR  YL  L  +L EK+ GC ++   TI+CKV+SLK+QY A++EML    SGFGWNEE+
Sbjct: 1   MFRPGYLQHLERILHEKVPGCALN-QNTIECKVRSLKKQYNAVSEMLSQ--SGFGWNEEF 60

Query: 61  KCMEAEKDVFDAWIKVSHTQLRK--DSSTSHSLDLTFVFGKDRATEGATQVPVHMASRAH 120
           KC++ E+++ D W++ SH   ++  + S SH  DL+ VFGKDR    +++ P  MA+ A 
Sbjct: 61  KCVQVEREILDLWVR-SHPNAKEMWNKSFSHYDDLSTVFGKDRVVGQSSEDPYVMATNAF 120

Query: 121 VEEEGDVNMGA 130
            E E ++ +G+
Sbjct: 121 REFEDEIRLGS 127

BLAST of Spg027647 vs. NCBI nr
Match: KAA0067583.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 113.6 bits (283), Expect = 2.4e-21
Identity = 65/174 (37.36%), Postives = 97/174 (55.75%), Query Frame = 0

Query: 2   FRASYLTRLRWMLREKISGCTIDLTTTIDCKVKSLKQQYGAIAEMLGLGCSGFGWNEEYK 61
           FR  YL +L  M+ EK+ GC +  TT IDC++K+LK+ + AIAEM G  CSGFGWN+E K
Sbjct: 40  FRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEK 99

Query: 62  CMEAEKDVFDAWIKVSHTQLRK--DSSTSHSLDLTFVFGKDRATEGATQVPVHMASRAHV 121
           C+ AEK++FD W++ SH   ++  +   S+  +LT+VFG+DRAT    +    + S    
Sbjct: 100 CIVAEKELFDNWVR-SHPAAKELLNKPFSYYDELTYVFGRDRATGRFAETFADVGSNEPG 159

Query: 122 EEEGDVNMGASPRYYVPVPLVFNVAIEAESTRAHNPYQETECNRDITGDEEEEG 174
                 +MG     + PV     V I  +  RA  P + +E     +G + + G
Sbjct: 160 GGYDRFDMGDGNEDFPPV-YSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRG 211

BLAST of Spg027647 vs. NCBI nr
Match: KAA0038314.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 112.1 bits (279), Expect = 7.0e-21
Identity = 58/138 (42.03%), Postives = 85/138 (61.59%), Query Frame = 0

Query: 2   FRASYLTRLRWMLREKISGCTIDLTTTIDCKVKSLKQQYGAIAEMLGLGCSGFGWNEEYK 61
           FR  YL +L  M+ EK+ GC +  T  IDC++K+LK+ + AIAEM GL CSGFGWN+E K
Sbjct: 40  FRPGYLAQLVRMIAEKLLGCQVRATIVIDCRIKTLKRTFQAIAEMWGLACSGFGWNDEEK 99

Query: 62  CMEAEKDVFDAWIKVSHTQLR--KDSSTSHSLDLTFVFGKDRATEGATQVPVHMASRAHV 121
           C+ AEK++FD W++ SH  ++   +    +   LT+VFG+DRAT+ +T+    + S    
Sbjct: 100 CIIAEKELFDNWVR-SHPTVKGLLNKPFPYYDKLTYVFGRDRATDRSTETFADVGSNEPD 159

Query: 122 EEEGDVNMGASPRYYVPV 138
            E    +MG     + PV
Sbjct: 160 GEYDRFDMGDGNEEFPPV 176

BLAST of Spg027647 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-23
Identity = 91/264 (34.47%), Postives = 131/264 (49.62%), Query Frame = 0

Query: 2   FRASYLTRLRWMLREKISGCTIDLTTTIDCKVKSLKQQYGAIAEMLGLGCSGFGWNEEYK 61
           F+  YL +L+ M+ EK+ G  I  ++TIDC VKSLK+ Y AIAEM G  CSGFGWNEE++
Sbjct: 40  FQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQ 99

Query: 62  CMEAEKDVFDAWIKVSHTQLR--KDSSTSHSLDLTFVFGKDRATEGATQVPVHMASRAHV 121
           C+ AE+D+FD+WIK SH   +     S  +  DL++VFGKDRAT   ++   ++ S    
Sbjct: 100 CIIAERDLFDSWIK-SHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSN 159

Query: 122 EEEGDVNMGASPRYYVPVPLVFNVAI---EAESTRAHNPYQETEC---NRDITGDEEEEG 181
                + +G S    +P      V +   E    RA    +   C   ++   G E  E 
Sbjct: 160 MFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYET 219

Query: 182 VILGRGPRH--HESSHGILDDPDDEDC----------RLLLGLPELTDDEMVDLMNILFL 241
           V + R      +E    I D P ++            + L  +P+L   +   LM ILF 
Sbjct: 220 VEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFR 279

Query: 242 DSKT-STFLSIPLALKFQFYRCLL 245
             +    FLSIP  LK ++   LL
Sbjct: 280 SLEAIEGFLSIPTELKLEYCNILL 302

BLAST of Spg027647 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-23
Identity = 91/264 (34.47%), Postives = 131/264 (49.62%), Query Frame = 0

Query: 2   FRASYLTRLRWMLREKISGCTIDLTTTIDCKVKSLKQQYGAIAEMLGLGCSGFGWNEEYK 61
           F+  YL +L+ M+ EK+ G  I  ++TIDC VKSLK+ Y AIAEM G  CSGFGWNEE++
Sbjct: 40  FQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQ 99

Query: 62  CMEAEKDVFDAWIKVSHTQLR--KDSSTSHSLDLTFVFGKDRATEGATQVPVHMASRAHV 121
           C+ AE+D+FD+WIK SH   +     S  +  DL++VFGKDRAT   ++   ++ S    
Sbjct: 100 CIIAERDLFDSWIK-SHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSN 159

Query: 122 EEEGDVNMGASPRYYVPVPLVFNVAI---EAESTRAHNPYQETEC---NRDITGDEEEEG 181
                + +G S    +P      V +   E    RA    +   C   ++   G E  E 
Sbjct: 160 MFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGSERYET 219

Query: 182 VILGRGPRH--HESSHGILDDPDDEDC----------RLLLGLPELTDDEMVDLMNILFL 241
           V + R      +E    I D P ++            + L  +P+L   +   LM ILF 
Sbjct: 220 VEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFR 279

Query: 242 DSKT-STFLSIPLALKFQFYRCLL 245
             +    FLSIP  LK ++   LL
Sbjct: 280 SLEAIEGFLSIPTELKLEYCNILL 302

BLAST of Spg027647 vs. ExPASy TrEMBL
Match: A0A5A7U308 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold88G00120 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 5.3e-22
Identity = 65/176 (36.93%), Postives = 101/176 (57.39%), Query Frame = 0

Query: 2   FRASYLTRLRWMLREKISGCTIDLTTTIDCKVKSLKQQYGAIAEMLGLGCSGFGWNEEYK 61
           FR  YL +L  M+ +K+ GC +  TT IDC++K+LK+ + AIAEM GL CSGFGWN+E K
Sbjct: 40  FRPGYLAQLVRMMAKKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGLACSGFGWNDEEK 99

Query: 62  CMEAEKDVFDAWIKVSHTQLR--KDSSTSHSLDLTFVFGKDRATEGATQVPVHMASRAHV 121
           C+ AEK++FD W++ SH + +   +    +  +LT+VFG+DRAT    +    + S    
Sbjct: 100 CIVAEKELFDNWVR-SHPEAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPG 159

Query: 122 EEEGDVNMGASPRYYVPVPLVFN--VAIEAESTRAHNPYQETECNRDITGDEEEEG 174
           +     +MG     +   PLV++  V I  +  RA  P + +E     +G + + G
Sbjct: 160 DGYDRFDMGDGNEDF---PLVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRG 211

BLAST of Spg027647 vs. ExPASy TrEMBL
Match: A0A5A7VHM3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00480 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-21
Identity = 65/174 (37.36%), Postives = 97/174 (55.75%), Query Frame = 0

Query: 2   FRASYLTRLRWMLREKISGCTIDLTTTIDCKVKSLKQQYGAIAEMLGLGCSGFGWNEEYK 61
           FR  YL +L  M+ EK+ GC +  TT IDC++K+LK+ + AIAEM G  CSGFGWN+E K
Sbjct: 40  FRPGYLAQLVRMMAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEK 99

Query: 62  CMEAEKDVFDAWIKVSHTQLRK--DSSTSHSLDLTFVFGKDRATEGATQVPVHMASRAHV 121
           C+ AEK++FD W++ SH   ++  +   S+  +LT+VFG+DRAT    +    + S    
Sbjct: 100 CIVAEKELFDNWVR-SHPAAKELLNKPFSYYDELTYVFGRDRATGRFAETFADVGSNEPG 159

Query: 122 EEEGDVNMGASPRYYVPVPLVFNVAIEAESTRAHNPYQETECNRDITGDEEEEG 174
                 +MG     + PV     V I  +  RA  P + +E     +G + + G
Sbjct: 160 GGYDRFDMGDGNEDFPPV-YSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRG 211

BLAST of Spg027647 vs. ExPASy TrEMBL
Match: A0A5A7VHE7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G002310 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 4.4e-21
Identity = 64/174 (36.78%), Postives = 96/174 (55.17%), Query Frame = 0

Query: 2   FRASYLTRLRWMLREKISGCTIDLTTTIDCKVKSLKQQYGAIAEMLGLGCSGFGWNEEYK 61
           FR  YL +L  M+ EK+ GC +  TT IDC++K+LKQ + AIAEM G  CSGFGWN+E K
Sbjct: 40  FRPGYLAQLVRMMAEKLPGCQVRTTTVIDCRIKTLKQTFQAIAEMRGPACSGFGWNDEEK 99

Query: 62  CMEAEKDVFDAWIKVSHTQLR--KDSSTSHSLDLTFVFGKDRATEGATQVPVHMASRAHV 121
           C+ AEK++FD W++ SH   +   +    +  +LT+VFG++RAT    +    + S    
Sbjct: 100 CIVAEKELFDNWVR-SHPAAKGLMNKPFPYYDELTYVFGRNRATGRFAETFADVGSNEPD 159

Query: 122 EEEGDVNMGASPRYYVPVPLVFNVAIEAESTRAHNPYQETECNRDITGDEEEEG 174
                 +MG     + PV     V I  ++ RA  P + +E     +G + + G
Sbjct: 160 GRYDRFDMGDGNEDFPPV-YSQGVDISQDNVRASRPSRASEGRTGSSGSKRKRG 211

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008441954.12.6e-2334.47PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 ret... [more]
KAA0050293.11.1e-2136.93retrotransposon protein [Cucumis melo var. makuwa][more]
XP_038880837.11.9e-2144.27uncharacterized protein LOC120072528 [Benincasa hispida][more]
KAA0067583.12.4e-2137.36retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0038314.17.0e-2142.03retrotransposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U0H71.2e-2334.47Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B4L31.2e-2334.47uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=... [more]
A0A5A7U3085.3e-2236.93Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7VHM31.2e-2137.36Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7VHE74.4e-2136.78Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 2..158
NoneNo IPR availablePANTHERPTHR46250:SF3MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEINcoord: 2..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg027647.1Spg027647.1mRNA