Spg027564 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg027564
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA-directed RNA polymerase subunit
Location	scaffold11: 4010728 .. 4018217 (-)
RNA-Seq Expression	Spg027564
Synteny	Spg027564

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTGTTCAACCGACAACAAGCGTATGGTTGTTGATCGTGGTGAGAGGACGGTGGTAGGCTCCGCCTCTTTCCCAACCAAAGAAGAGTCGCCCACGATGTTGGTCGAAACTTTCTTGGTTGCCATAAAGATTGTGCCCAAAGTCTTGATGCTCTGATACCAATCTTGGTGTAGCCGAAACTAGGTATTAATTAGAATGAATAATGATATCTTATTAATGAAGTTCCAGCCTTTAAATAGGCAAAGGAACTAACTAAAAAAGGTTACAAGGAACATGCTACTCACATGATAGATTAAAGGGATAACTAACTAATTAATACATAAGAAAGGCTACACCATTATGCAAGATAGTTGAATTGTATGTTTGAAGTTGTATTGATTTTTAAAATCTAAAGAACGTCTCTTAACTATAATGCAGGCCAAAGGCTTTGTTGCAAATTCCTTCTACAGTGGCTTGACAGCTACGGAGTTTTTCTTTCATACGATGGGAGGACGAGAAGGCCTTGTGGACACAGCGGTAGGGCTATTATCCATTAGCATTATAATTACTTAATATTTATGGGAAATTTAACTTTATATTTTTGTTTCCCTTCGTTTTCCTTTTGTTGCTAAAAAATAAGAATTTCAAACTAAGTGAATAAATTATTGAACGGGATGTTGACCTTGACCCTGATTATGTCATAATGAATTAGTAAGTATTACGATAAAACTATGGAGAATAATGCATGTCATTCTATATATATGTGCGTACATGGAAGTACTAAATTAATAATACTAAATTGGAGAAAAGACTAAGGTACTCCTTTTTACATATATATACTATAACAGAAAGAGTTCCTTTTATCTTTCATATATTCCCAAATTCTTGAATTAACCAATTTTAGTTAATTAATAATTTAGGCCTCTCGGTTGACTCTTTAACCATTCTCGAGGATATAAATTATTTTTTATCAAGTTGGTCAGTGTAACTTTGATGAATGACTATTTGGTTGATTATCTCAGCCTTTACTACTTTGTCAATCTGCAAGATTGAAACTAAAGAATATTATTTAAATATGCCGCATAAGTAGAAGTACTAGATTACGTATTACTTACAAATAAGATAAAGCTTCGCAACATAGAAGCGCAAACAAAGACACAGACACTAGTCAAGACAACAATTTGTTAAATACATTAACTGATTCAAATGTATTGATGTCCAATAAAATGTCAGAGTATCTCATATATACAGACAGGACACGGTCACGTGGTCATATAGCCAAAACTAAAGTGTCTATATGTCATAACTTGTCAACAAATTAAACTTTTGAGAACTGAGTGAATCTTTGAAAATTAACCAAGTGTTGGGCCCTTTTTTTAAGTGCTAGGGTTGTCGGGTGGGTTGTTTCCCACCCAATTGAAAATTATGGTTAGTCTTGAATTCCTAATGAGATGAGTATAAAAGTATATAGTATTAGAATGAATTTGAGATTTGTTATTATTGAGAGGAGTAAGTGGAAAGTTTGGAGATGCATATTGTTGAGAACAATACTTTTCAGGTGAAAACAGCCGACACTGGTTACATGTCTCGTAGATTGATCAAAGCACTGGAAGACTTATCCATTCATTATGACAGCTCTGTACGAAATGCTGGTGGATGTATTGTTCAATTCTGTTATGGAGATGATGGAATGGATCCAGCACAAATGGAAGGGAAAAGTGGAGCACCTTTGAATTTTGAGCGGTTGTTTTTGAAAGCCAAGGTTTGGAATCATATCTCAGATGTTCTTTTTCCACAAAGTGCTTACATTTTCGATATCAACATATTAAAAGTATCATTTGAGTTTATACAGGCTACATGTCCTATTGATGGAAACAAAATCCTGTCTCCATCAGAATTTTCCGAGACGGTAGAAGACAGGCTCTTAAAAGATGATGCTACTCCTGAGTGTGGCTGCTCTCCAGCATTCATTGGTTCTCTTAAGATTTTCCTGAACAAATACATTGAAGCACAAAAAAAATCATGGGGCACACTGTTGGATAATGAATCAGATGTAGGCAAAAAGACCATTGGTAGTTCTGAGAATGACGATACTGTGATTCGGAATAAGGTACTCCAGAATATAGCTGGTGTCACACAAAGACAACTACAGGTAGTTTTACAATTTTGCTTAGTTTTCTTCATCAATTGTCACTTCATTTTCTTCTACCCAGGAATAGTTCAATTAGATTGTACTTTGGATCTTTAAATATAAATTCATAAATAGTTTACTGTATTGACTGTAAAAGTCGGTGCATTTCATCAAATTCTTGTGAATAGGAAAGATTATGATTTCTTCTCTTTCAGTGGAAACTACTTTCAATTTGGGATAACTTTAGATTTGGAAATCTTGATTATTATTTCTTATTAGTAACTTGCATTTATCTTAGGTTTTCTTGGACACCTGCTTGTCCCGCTACCATACAAAAAAAATTGAAGCTGGAACTGCCATTGGTGCCATTGGAGCTCAAAGTATTGGAGAACCTGGGACTCAAATGACATTAAAAACATTTCATTTTGCAGGAGTTGCTAGCATGAGTATCCTTTGCTTCTTTTTTCTTTTTCCCTGTTTTTTTCAACAATAACATACTCTATACAATATTTGGGTTCCTTGGATATTGGTCCTTCTTGTGATCTTTTAACTTGTTGATAGACGTTACTCTTGGCGTTCCAAGGATCAAAGAAATTATAAATGGAGCCAAAAGGATCAGCACTCCAATTGTCACTGCAGCACTTAAGCAAGATGATAATGTGAATATTGCTCGGATGGTAAAAGCTCGAATTGAGAAAACAAATCTAGGACAGGTATGTAATTTAACTTGGACTATGTCTTTGAACTCTTATATTATGCTTTTTCCTTATTAATTCGTCATTTAGAAAAAGCTGTTTTGACTTTATGGGTACTTTTTAGTGTTCTTTCCCTGAGCTGGAGAGAATATACTGGCAACACTTTTTGCTAACCCAGAGTATATAGCTTAACTGATTTAGGCATCGTATTTTCAACCTAACGAAGGAAAACAGATGAGTAGTTTATTGATGGTAAGAAAAACCCACAGCCTCATTGAGGTTGTTTTATCTATTGAAGACATAGAAGAGGATTTGTTTTTCCTCTTTTTGCATGCTAATCTGTTTGATCCCTTATATCACAAGAATATTTGATTCATGGGGATTGGGGAACTTCAGAAAATTAATTAAATAATTAACTGTCAACTGAATGGTTACTGCTATATTGCAAATAGAGCTTCATGGCCACATAATTACCTACAACATTTTAATATATATATTTTTTTACCATAAGGAGCGGGACAGAAGATTTTCTTATTTTATATTCTAGAACAAATTCAAGTATTTTTCCTTTGCCCAATTTTATGTTGGGACCTATTGGTTTTCATCCTTACTGATCTTTCCTGGCATCTCGCTATTGATCAGATTGCAAAATGCATACAAATTGTAATGAGTTCAAGATCAGCTTTAATAGAAATCAAACTTGACATGGAGAAAATCAGAGATGCAGAACTATATGTAGATGCCAATGTTGTCAAACAAGCAATTCTCCTTACGCCAAAACTCAAACTGAAGCATGAGGTGAGCTAAATTATTGATCCTTTTATTTGTTTGACCAATTCCAATTTCATTTTATCTCAAATACCACATTACTTTGCAGCATATTAATGTTTTGGATGATAGAAAGCTACGAGTTCTTCCTCAAGACGGAGATAGGAGTAAACTTCATTTTAATCTACACTTTCTTAAAAACATGCTTCCAGCAGTTGTTGTTAAGGTGTGCGTACTACAATTTTTTTTTAATCACAATAGACCAGGTGTTTTGTTCCTTTTATTTTATTAACTTTTATGAGAAATATAACAGACTTTATTGGATAACAGGGCATAAAAACTGTTGGGCGTGCCGTCATTAAAGAGGAAAAAGACAAAGTAAGGAACGCCAAAAAGTTCAGTTTGTTGGTCGAAGGGTTAGTTTATGACTTTTTCCTGCTTCGAGTTTTATTAGTTGTACTTTTTTAATTTAAAATACACTGATGAAACTCTTTTTAAAAATAAAAGTGACCAACTTACGCCTGCTAATTTTTACATTAAGATATTTTTCTTGCATTCTTACCTTCCTGAAGCTGGATGTTCAGGATAAAATATTTTCCATTAGGTTGCATTGTGTTCATAGACTTAGCCTCTTCACTTCTGCTATAGTTATAGCATTCTTGTTGAACACATACTGATTCTTAAGCATTAAATAAGGGGTTATAGATGCAAGTTAGTGGGGGTGTTAGACTTGCTTTTTTCCTTTTCCTTTTCTGCATGGGTGTTCAAATCTTTCCCAAGGAATTGTATTAAGATGAAGGTCATACAATTGAACTGCCTGTACACCTTGCTCTGATTCTTTCCACGGGATTTTGAGTGATTTTAAATCTATTCCTTTGTTTTAATCATTTAAAATCAAATTATTTGAAATCAACTTTTGTTTTTACTTTAAAACATTTCAGACTAAAATGATTGGATCTTGTGATTTGAAGTTATATACTAATTTAACACTAGATTGTAGTTTTTCATTCATAAATTATGACTGATAGAGTATACTATTAAAATGTAATTTTTTGAACATCCAAACCAAAAAATATAACTATTTAAAATCATGTGATTTAACATTATTGCCTATACTTTCTATTCCAGATTGAGGACCGTGAGTTGAAAACCTTATTTACTACAATGAAGCCTAGGTTTTGGTTGCATAAACTGAAATTAAGGGGTCTTGTATAGTTTATTGAGGACCGTGAGTTGAAAACCTTATTTACTACAATGAAGCCTAGGTTTTGGTTGCATAAACTGAAATTAAGGGGTCTTGTATAGTTTAGTTGATTGTGGTGACAAAAATCTGATCGTTATGCATATGCATTGCGTCGTTAATGAAAAGTACTTAAATACAACTAATAGTATAGTTTTATGTAGACTTGTTAAAAAAGTCCCTGCCATTTGTAGTGGCAGTTTGAAGGGAGCTTTACGAAGGTTCTACTTCTAGCTTGAGAATGGGCTTCCTCTACCCCTTGCTCCTTGGCTGTTTTTTTTTTCTGTTTTTAGCCCAATTCCTATTTTGCTAATCGTTACTTGATCCAACCTTCGTATTTCAAGTCTAGAATCCACGGAAGTTTATCTTATGTTGGTGATGGGTTTTGATAACACCTGTACTATTGATAGGAAAGGCAGCTCCTTTTTTAGGTGCTTTTAGATAATTAATTACATAGAAGACTTCAAGGGAATGAGTTCTTTTTTTTGGATAAGAAACGATAAGAGGAATATATTGCCACAAAAAAGGAACAGCCTAAGGGCCGGGGATGAGAAAGCCCCTCCCAAAACTATCTCAAAAGCGCTTGCCAATCGCTAATAATCATGAGTAGACTGTAGTTACAAAAAAAACTTTCTGTGCAAAGAGACCCACCAAGAGGCCGTATTTTGTACAAGATTACAAAAGTTATCCAGCGAAATGGATTTGTCTTCAAAAGTTCTCGCATTCCTCTCCTTCCACAAAAGCCGCATTCCTCTCCTTCCACAAAAGCCATAAGTTAGCTCTAAAAGCACACCCCGCAATCACTCTAGCCTTCTTCTTCAAATTCCAAGCGTTCAATCCATGAGTTCAATCCATGAGTGCCATCTAGGATTTAATATCCTACGTATTTCCTAGCAACCAAATGTAGTAAGGTCAGGTAGTTGTCCCATGAGATTAGTTAAGCTGCGCACAAGTTGGCCCAGATACTCACGGATATTAAAAAAAAATATTTACATAGAATGCCTTCAATTGAAAATTTCCTCTCAATTTTGATACTGTTTTAAATATTGATAATTTTCTAACGTCTCCAAGGTTCTTAGTAGCCTCTTACTTCCAATAGCTATGGAGCAAACGGATAATGACGGATAATGATCTATATATTTGATTATATCTTTTCTCAGAACGGGACTTCAAGCTGTTATGGGCACTGAGGGAGTTGATGGATGTAACACGAAGAGTAATCACATCATTGAAGTGCAACAAGTACTTGGCATTGAAGCTGCAAGGAAGTGTATTATTGAAGAGATAAAATATACCATGGAAAGTCATGGAATGAGCATAGACATACGTCATATGATGCTTTTAGGAGATTTGATGACATTCAGGGTAAGTTGTGTTGGAATACAAAATTACTTGCATTATGTATAGGTTGAGGCGATGAACCTTTTAGCTGCGTGACAGGGTGAAGTTCTTGGAATCACAAGATTTGGCATTCAAAAAATGGATAAAAGTGTATTGATGCTTGCTTCATTTGAGAAAACCGCGGATCATCTTTTTAATGCTTCTGTAAATGGAAGAGATGACAAGATTGAAGGAGTCAGTGAATGCGTAATCATGGGTATACCAATGCCGCTAGGCACTGGCATGTTAAAAGTCAGACAAAGGTATGAATCTCCTTATGGGACAGAGACCAATTCATTTTATGTGGTAAAACTATATTTTAGAAGGTCAAATTTCTTTTTTGTGAGACTTGATATCATTGGCAGTGTCTTATGTATGCTTTTTATGCTTTTTTGAAGTTCTAACATTATGGTTGAACATGGTTCGGAATTAACATAACAATACTTTAGATAGATACTCTTGAGGAAGGTTATCACCGAGTTCAGAATCAACATGACCAATTTTTTACGCATGTTGAAGCTAATGGGGAACCATTCTTTTTAACAGAGCTTCTGTGCCACAACATTTGCCTTATGGACCAGTTGCAATTCTATCCTGAGTTCATAGAACACACATCATCGAGTATGATTATGTCGAATCGCATAGCATGACGGGTACAACAAGTATGGTATTTTATATAATGGCAAATGATTTTTATTTTTTGCTCAGTTTCAAAGAATTACTCTGTGATAACTATTAATTTAGTAAACTTGTGTTATTTTGTTGTTTTGCAAACAGGCATCGATGGCGTTCGGCTTTTTCAGTGGTCGGGCTTTGTATATATATATATAGTCGGAGTTTTTAGTTTGTATTCTGTTTATTTGTCCAATTGAGCCTAGCGAAGCAAGTAGTTCACTACCCCATCAAACTAGTTGTGGTAGAACAAAATTTTGACGTCATTGATTATATTAGTCATTGCAATTTGAAGTAAAGTTCATGCATTTTACTTGCATCGTGTTTTATTCTTTGGAAGAGGTACAATGCGTAGAGAATGGATGTAAATCACAATAGCAAGTCTCTCTCTTCATTTCAGTCTTCGAGTGTGTTTGACAGTACTTTTAGAAAGCTAGAAGTGTTTTATTTAAAAATCTGGATGTGCTTGGTAACCAGCAAAATGTATCTATTATCAAATTGATTTAATGTGCTTACAATTCTCTCTCTAAATATTGTTTATAACATGTCGGATCAACCACTGTTTGACATGGTTGTCTCAATGTACATAATGAAAGGCTTAGAAAGAATGAATTTAGGTCGG

mRNA sequence

ATGTCTTGTTCAACCGACAACAAGCGTATGGTTGTTGATCGTGGTGAGAGGACGGTGGTAGGCTCCGCCTCTTTCCCAACCAAAGAAGAGTCGCCCACGATGTTGGCCAAAGGCTTTGTTGCAAATTCCTTCTACAGTGGCTTGACAGCTACGGAGTTTTTCTTTCATACGATGGGAGGACGAGAAGGCCTTGTGGACACAGCGGTGAAAACAGCCGACACTGGTTACATGTCTCGTAGATTGATCAAAGCACTGGAAGACTTATCCATTCATTATGACAGCTCTGTACGAAATGCTGGTGGATGTATTGTTCAATTCTGTTATGGAGATGATGGAATGGATCCAGCACAAATGGAAGGGAAAAGTGGAGCACCTTTGAATTTTGAGCGGTTGTTTTTGAAAGCCAAGGTTTGGAATCATATCTCAGATGTTCTTTTTCCACAAAGTGCTTACATTTTCGATATCAACATATTAAAAGTATCATTTGAGTTTATACAGGCTACATGTCCTATTGATGGAAACAAAATCCTGTCTCCATCAGAATTTTCCGAGACGGTAGAAGACAGGCTCTTAAAAGATGATGCTACTCCTGAGTGTGGCTGCTCTCCAGCATTCATTGGTTCTCTTAAGATTTTCCTGAACAAATACATTGAAGCACAAAAAAAATCATGGGGCACACTGTTGGATAATGAATCAGATGTAGGCAAAAAGACCATTGGTAGTTCTGAGAATGACGATACTGTGATTCGGAATAAGGTACTCCAGAATATAGCTGGTGTCACACAAAGACAACTACAGGTTTTCTTGGACACCTGCTTGTCCCGCTACCATACAAAAAAAATTGAAGCTGGAACTGCCATTGGTGCCATTGGAGCTCAAAGTATTGGAGAACCTGGGACTCAAATGACATTAAAAACATTTCATTTTGCAGGAGTTGCTAGCATGAACGTTACTCTTGGCGTTCCAAGGATCAAAGAAATTATAAATGGAGCCAAAAGGATCAGCACTCCAATTGTCACTGCAGCACTTAAGCAAGATGATAATGTGAATATTGCTCGGATGGTAAAAGCTCGAATTGAGAAAACAAATCTAGGACAGATTGCAAAATGCATACAAATTGTAATGAGTTCAAGATCAGCTTTAATAGAAATCAAACTTGACATGGAGAAAATCAGAGATGCAGAACTATATGTAGATGCCAATGTTGTCAAACAAGCAATTCTCCTTACGCCAAAACTCAAACTGAAGCATGAGCATATTAATGTTTTGGATGATAGAAAGCTACGAGTTCTTCCTCAAGACGGAGATAGGAGTAAACTTCATTTTAATCTACACTTTCTTAAAAACATGCTTCCAGCAGTTGTTGTTAAGGGCATAAAAACTGTTGGGCGTGCCGTCATTAAAGAGGAAAAAGACAAAGTAAGGAACGCCAAAAAGTTCAGTTTGTTGGTCGAAGGAACGGGACTTCAAGCTGTTATGGGCACTGAGGGAGTTGATGGATGTAACACGAAGAGTAATCACATCATTGAAGTGCAACAAGTACTTGGCATTGAAGCTGCAAGGAAGTGTATTATTGAAGAGATAAAATATACCATGGAAAGTCATGGAATGAGCATAGACATACGTCATATGATGCTTTTAGGAGATTTGATGACATTCAGGGGTGAAGTTCTTGGAATCACAAGATTTGGCATTCAAAAAATGGATAAAAGTGTATTGATGCTTGCTTCATTTGAGAAAACCGCGGATCATCTTTTTAATGCTTCTGTAAATGGAAGAGATGACAAGATTGAAGGAGTCAGTGAATGCGTAATCATGGGTATACCAATGCCGCTAGGCACTGGCATGTTAAAAGTCAGACAAAGAGCTTCTGTGCCACAACATTTGCCTTATGGACCAGTTGCAATTCTATCCTGA

Coding sequence (CDS)

ATGTCTTGTTCAACCGACAACAAGCGTATGGTTGTTGATCGTGGTGAGAGGACGGTGGTAGGCTCCGCCTCTTTCCCAACCAAAGAAGAGTCGCCCACGATGTTGGCCAAAGGCTTTGTTGCAAATTCCTTCTACAGTGGCTTGACAGCTACGGAGTTTTTCTTTCATACGATGGGAGGACGAGAAGGCCTTGTGGACACAGCGGTGAAAACAGCCGACACTGGTTACATGTCTCGTAGATTGATCAAAGCACTGGAAGACTTATCCATTCATTATGACAGCTCTGTACGAAATGCTGGTGGATGTATTGTTCAATTCTGTTATGGAGATGATGGAATGGATCCAGCACAAATGGAAGGGAAAAGTGGAGCACCTTTGAATTTTGAGCGGTTGTTTTTGAAAGCCAAGGTTTGGAATCATATCTCAGATGTTCTTTTTCCACAAAGTGCTTACATTTTCGATATCAACATATTAAAAGTATCATTTGAGTTTATACAGGCTACATGTCCTATTGATGGAAACAAAATCCTGTCTCCATCAGAATTTTCCGAGACGGTAGAAGACAGGCTCTTAAAAGATGATGCTACTCCTGAGTGTGGCTGCTCTCCAGCATTCATTGGTTCTCTTAAGATTTTCCTGAACAAATACATTGAAGCACAAAAAAAATCATGGGGCACACTGTTGGATAATGAATCAGATGTAGGCAAAAAGACCATTGGTAGTTCTGAGAATGACGATACTGTGATTCGGAATAAGGTACTCCAGAATATAGCTGGTGTCACACAAAGACAACTACAGGTTTTCTTGGACACCTGCTTGTCCCGCTACCATACAAAAAAAATTGAAGCTGGAACTGCCATTGGTGCCATTGGAGCTCAAAGTATTGGAGAACCTGGGACTCAAATGACATTAAAAACATTTCATTTTGCAGGAGTTGCTAGCATGAACGTTACTCTTGGCGTTCCAAGGATCAAAGAAATTATAAATGGAGCCAAAAGGATCAGCACTCCAATTGTCACTGCAGCACTTAAGCAAGATGATAATGTGAATATTGCTCGGATGGTAAAAGCTCGAATTGAGAAAACAAATCTAGGACAGATTGCAAAATGCATACAAATTGTAATGAGTTCAAGATCAGCTTTAATAGAAATCAAACTTGACATGGAGAAAATCAGAGATGCAGAACTATATGTAGATGCCAATGTTGTCAAACAAGCAATTCTCCTTACGCCAAAACTCAAACTGAAGCATGAGCATATTAATGTTTTGGATGATAGAAAGCTACGAGTTCTTCCTCAAGACGGAGATAGGAGTAAACTTCATTTTAATCTACACTTTCTTAAAAACATGCTTCCAGCAGTTGTTGTTAAGGGCATAAAAACTGTTGGGCGTGCCGTCATTAAAGAGGAAAAAGACAAAGTAAGGAACGCCAAAAAGTTCAGTTTGTTGGTCGAAGGAACGGGACTTCAAGCTGTTATGGGCACTGAGGGAGTTGATGGATGTAACACGAAGAGTAATCACATCATTGAAGTGCAACAAGTACTTGGCATTGAAGCTGCAAGGAAGTGTATTATTGAAGAGATAAAATATACCATGGAAAGTCATGGAATGAGCATAGACATACGTCATATGATGCTTTTAGGAGATTTGATGACATTCAGGGGTGAAGTTCTTGGAATCACAAGATTTGGCATTCAAAAAATGGATAAAAGTGTATTGATGCTTGCTTCATTTGAGAAAACCGCGGATCATCTTTTTAATGCTTCTGTAAATGGAAGAGATGACAAGATTGAAGGAGTCAGTGAATGCGTAATCATGGGTATACCAATGCCGCTAGGCACTGGCATGTTAAAAGTCAGACAAAGAGCTTCTGTGCCACAACATTTGCCTTATGGACCAGTTGCAATTCTATCCTGA

Protein sequence

MSCSTDNKRMVVDRGERTVVGSASFPTKEESPTMLAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKVWNHISDVLFPQSAYIFDINILKVSFEFIQATCPIDGNKILSPSEFSETVEDRLLKDDATPECGCSPAFIGSLKIFLNKYIEAQKKSWGTLLDNESDVGKKTIGSSENDDTVIRNKVLQNIAGVTQRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALKQDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILLTPKLKLKHEHINVLDDRKLRVLPQDGDRSKLHFNLHFLKNMLPAVVVKGIKTVGRAVIKEEKDKVRNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVPQHLPYGPVAILS

Homology

[Close]

BLAST of Spg027564 vs. NCBI nr
Match: XP_023519826.1 (DNA-directed RNA polymerase III subunit 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1065.8 bits (2755), Expect = 1.4e-307
Identity = 550/612 (89.87%), Postives = 562/612 (91.83%), Query Frame = 0


Query: 28   KEESPTMLAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 87
            + ++ T  AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED
Sbjct: 819  RRKAKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 878

Query: 88   LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKVWNHISDVLFP 147
            LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSG PLNFERLFLKAK           
Sbjct: 879  LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGTPLNFERLFLKAK----------- 938

Query: 148  QSAYIFDINILKVSFEFIQATCPIDGNKILSPSEFSETVEDRLLKDDATPECGCSPAFIG 207
                               ATCPIDGNKILSPSEFSETVEDRL K DATPE GCSPAF+G
Sbjct: 939  -------------------ATCPIDGNKILSPSEFSETVEDRLSKSDATPESGCSPAFVG 998

Query: 208  SLKIFLNKYIEAQKKSWGTLL-DNESDVGKKTIGSSENDDTVIRNKVLQNIAGVTQRQLQ 267
            SLKIFLNKY+EAQKKSW TLL DNESDVGK  IGSSEND+T+IRNKV+QNIAGVT RQLQ
Sbjct: 999  SLKIFLNKYVEAQKKSWSTLLADNESDVGKSVIGSSENDNTMIRNKVVQNIAGVTHRQLQ 1058

Query: 268  VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 327
            VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE
Sbjct: 1059 VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 1118

Query: 328  IINGAKRISTPIVTAALKQDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKL 387
            IINGAK+ISTPIVTAALK +DNVNIARMVKARIEKTNLGQIAKCIQIVMS+RSALIEIKL
Sbjct: 1119 IINGAKKISTPIVTAALKHNDNVNIARMVKARIEKTNLGQIAKCIQIVMSTRSALIEIKL 1178

Query: 388  DMEKIRDAELYVDANVVKQAILLTPKLKLKHEHINVLDDRKLRVLPQDGDRSKLHFNLHF 447
            DMEKIRDAELYVDANVVKQAIL+TPKLKLKHEHINVLDDRKLRVLPQD DRSKLHFNLHF
Sbjct: 1179 DMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDTDRSKLHFNLHF 1238

Query: 448  LKNMLPAVVVKGIKTVGRAVIKEEKDKVRNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN 507
            LKNMLP VVVKGIKTVGRAVIKEEKDK RNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN
Sbjct: 1239 LKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN 1298

Query: 508  HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 567
            HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ
Sbjct: 1299 HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 1358

Query: 568  KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP 627
            KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP
Sbjct: 1359 KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP 1400

Query: 628  QHLPYGPVAILS 639
              LPYGP AILS
Sbjct: 1419 HQLPYGPPAILS 1400

[Close]

BLAST of Spg027564 vs. NCBI nr
Match: KAG6583479.1 (DNA-directed RNA polymerase III subunit 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1063.5 bits (2749), Expect = 7.0e-307
Identity = 549/612 (89.71%), Postives = 561/612 (91.67%), Query Frame = 0


Query: 28   KEESPTMLAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 87
            + ++ T  AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED
Sbjct: 819  RRKAKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 878

Query: 88   LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKVWNHISDVLFP 147
            LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSG PLNFERLFLKAK           
Sbjct: 879  LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGTPLNFERLFLKAK----------- 938

Query: 148  QSAYIFDINILKVSFEFIQATCPIDGNKILSPSEFSETVEDRLLKDDATPECGCSPAFIG 207
                               ATCPIDGNKILSPSEFSETVEDRL K DATPE GCSPAF+G
Sbjct: 939  -------------------ATCPIDGNKILSPSEFSETVEDRLSKSDATPESGCSPAFVG 998

Query: 208  SLKIFLNKYIEAQKKSWGTLL-DNESDVGKKTIGSSENDDTVIRNKVLQNIAGVTQRQLQ 267
            SLKIFLNKY+EAQKKSW TLL DNESDVGK  IGSSEND+ +IRNKV+QNIAGVT RQLQ
Sbjct: 999  SLKIFLNKYVEAQKKSWSTLLADNESDVGKSVIGSSENDNIMIRNKVVQNIAGVTHRQLQ 1058

Query: 268  VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 327
            VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE
Sbjct: 1059 VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 1118

Query: 328  IINGAKRISTPIVTAALKQDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKL 387
            IINGAK+ISTPIVTAALK +DNVNIARMVKARIEKTNLGQIAKCIQIVMS+RSALIEIKL
Sbjct: 1119 IINGAKKISTPIVTAALKHNDNVNIARMVKARIEKTNLGQIAKCIQIVMSTRSALIEIKL 1178

Query: 388  DMEKIRDAELYVDANVVKQAILLTPKLKLKHEHINVLDDRKLRVLPQDGDRSKLHFNLHF 447
            DMEKIRDAELYVDANVVKQAIL+TPKLKLKHEHINVLDDRKLRVLPQD DRSKLHFNLHF
Sbjct: 1179 DMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDTDRSKLHFNLHF 1238

Query: 448  LKNMLPAVVVKGIKTVGRAVIKEEKDKVRNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN 507
            LKNMLP VVVKGIKTVGRAVIKEEKDK RNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN
Sbjct: 1239 LKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN 1298

Query: 508  HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 567
            HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ
Sbjct: 1299 HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 1358

Query: 568  KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP 627
            KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP
Sbjct: 1359 KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP 1400

Query: 628  QHLPYGPVAILS 639
              LPYGP AILS
Sbjct: 1419 HQLPYGPPAILS 1400

[Close]

BLAST of Spg027564 vs. NCBI nr
Match: XP_022964790.1 (DNA-directed RNA polymerase III subunit 1 [Cucurbita moschata])

HSP 1 Score: 1063.5 bits (2749), Expect = 7.0e-307
Identity = 549/612 (89.71%), Postives = 561/612 (91.67%), Query Frame = 0


Query: 28   KEESPTMLAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 87
            + ++ T  AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED
Sbjct: 819  RRKAKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 878

Query: 88   LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKVWNHISDVLFP 147
            LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSG PLNFERLFLKAK           
Sbjct: 879  LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGTPLNFERLFLKAK----------- 938

Query: 148  QSAYIFDINILKVSFEFIQATCPIDGNKILSPSEFSETVEDRLLKDDATPECGCSPAFIG 207
                               ATCPIDGNKILSPSEFSETVEDRL K DATPE GCSPAF+G
Sbjct: 939  -------------------ATCPIDGNKILSPSEFSETVEDRLSKSDATPESGCSPAFVG 998

Query: 208  SLKIFLNKYIEAQKKSWGTLL-DNESDVGKKTIGSSENDDTVIRNKVLQNIAGVTQRQLQ 267
            SLKIFLNKY+EAQKKSW TLL DNESDVGK  IGSSEND+ +IRNKV+QNIAGVT RQLQ
Sbjct: 999  SLKIFLNKYVEAQKKSWSTLLADNESDVGKSVIGSSENDNIMIRNKVVQNIAGVTHRQLQ 1058

Query: 268  VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 327
            VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE
Sbjct: 1059 VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 1118

Query: 328  IINGAKRISTPIVTAALKQDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKL 387
            IINGAK+ISTPIVTAALK +DNVNIARMVKARIEKTNLGQIAKCIQIVMS+RSALIEIKL
Sbjct: 1119 IINGAKKISTPIVTAALKHNDNVNIARMVKARIEKTNLGQIAKCIQIVMSTRSALIEIKL 1178

Query: 388  DMEKIRDAELYVDANVVKQAILLTPKLKLKHEHINVLDDRKLRVLPQDGDRSKLHFNLHF 447
            DMEKIRDAELYVDANVVKQAIL+TPKLKLKHEHINVLDDRKLRVLPQD DRSKLHFNLHF
Sbjct: 1179 DMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDTDRSKLHFNLHF 1238

Query: 448  LKNMLPAVVVKGIKTVGRAVIKEEKDKVRNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN 507
            LKNMLP VVVKGIKTVGRAVIKEEKDK RNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN
Sbjct: 1239 LKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN 1298

Query: 508  HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 567
            HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ
Sbjct: 1299 HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 1358

Query: 568  KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP 627
            KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP
Sbjct: 1359 KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP 1400

Query: 628  QHLPYGPVAILS 639
              LPYGP AILS
Sbjct: 1419 HQLPYGPPAILS 1400

[Close]

BLAST of Spg027564 vs. NCBI nr
Match: XP_022970436.1 (DNA-directed RNA polymerase III subunit 1 [Cucurbita maxima])

HSP 1 Score: 1063.5 bits (2749), Expect = 7.0e-307
Identity = 548/612 (89.54%), Postives = 562/612 (91.83%), Query Frame = 0


Query: 28   KEESPTMLAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 87
            + ++ T  AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED
Sbjct: 819  RRKAKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 878

Query: 88   LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKVWNHISDVLFP 147
            LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSG PLNFERLFLKAK           
Sbjct: 879  LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGTPLNFERLFLKAK----------- 938

Query: 148  QSAYIFDINILKVSFEFIQATCPIDGNKILSPSEFSETVEDRLLKDDATPECGCSPAFIG 207
                               ATCPIDGNKILSPSEFSETVEDRL K DA+PECGCSPAF+G
Sbjct: 939  -------------------ATCPIDGNKILSPSEFSETVEDRLSKSDASPECGCSPAFVG 998

Query: 208  SLKIFLNKYIEAQKKSWGTLL-DNESDVGKKTIGSSENDDTVIRNKVLQNIAGVTQRQLQ 267
            SLKIFLNKY+EAQKKSW TLL DNES+VGK  IGSSEND+ +IRNKV+QNIAGVT RQLQ
Sbjct: 999  SLKIFLNKYVEAQKKSWSTLLADNESNVGKSIIGSSENDNIMIRNKVVQNIAGVTHRQLQ 1058

Query: 268  VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 327
            VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE
Sbjct: 1059 VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 1118

Query: 328  IINGAKRISTPIVTAALKQDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKL 387
            IINGAK+ISTPIVTAALK +DNVNIARMVKARIEKTNLGQIAKCIQIVMS+RSALIEIKL
Sbjct: 1119 IINGAKKISTPIVTAALKHNDNVNIARMVKARIEKTNLGQIAKCIQIVMSTRSALIEIKL 1178

Query: 388  DMEKIRDAELYVDANVVKQAILLTPKLKLKHEHINVLDDRKLRVLPQDGDRSKLHFNLHF 447
            DMEKIRDAELYVDANVVKQAIL+TPKLKLKHEHINVLDDRKLRVLPQD DRSKLHFNLHF
Sbjct: 1179 DMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDTDRSKLHFNLHF 1238

Query: 448  LKNMLPAVVVKGIKTVGRAVIKEEKDKVRNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN 507
            LKNMLP VVVKGIKTVGRAVIKEEKDK RNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN
Sbjct: 1239 LKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN 1298

Query: 508  HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 567
            HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ
Sbjct: 1299 HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 1358

Query: 568  KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP 627
            KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP
Sbjct: 1359 KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP 1400

Query: 628  QHLPYGPVAILS 639
              LPYGP AILS
Sbjct: 1419 HQLPYGPPAILS 1400

[Close]

BLAST of Spg027564 vs. NCBI nr
Match: XP_004148776.1 (DNA-directed RNA polymerase III subunit 1 isoform X1 [Cucumis sativus] >KAE8652732.1 hypothetical protein Csa_013764 [Cucumis sativus])

HSP 1 Score: 1063.1 bits (2748), Expect = 9.1e-307
Identity = 549/612 (89.71%), Postives = 560/612 (91.50%), Query Frame = 0


Query: 28   KEESPTMLAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 87
            + ++ T  AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED
Sbjct: 819  RRKAKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 878

Query: 88   LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKVWNHISDVLFP 147
            LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAK           
Sbjct: 879  LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAK----------- 938

Query: 148  QSAYIFDINILKVSFEFIQATCPIDGNKILSPSEFSETVEDRLLKDDATPECGCSPAFIG 207
                               ATCP DGNKILSPSEFSETVEDRL KDDA+PECGCSPAF+G
Sbjct: 939  -------------------ATCPSDGNKILSPSEFSETVEDRLSKDDASPECGCSPAFVG 998

Query: 208  SLKIFLNKYIEAQKKSWGTLL-DNESDVGKKTIGSSENDDTVIRNKVLQNIAGVTQRQLQ 267
            SLKIFLNKY+EAQKKSWGTLL DNES V K  I SS+ND+ VIRNKV+QNIAGVT RQLQ
Sbjct: 999  SLKIFLNKYVEAQKKSWGTLLADNESAVDKSIISSSDNDNIVIRNKVVQNIAGVTHRQLQ 1058

Query: 268  VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 327
            VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE
Sbjct: 1059 VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 1118

Query: 328  IINGAKRISTPIVTAALKQDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKL 387
            IINGAKRISTPIVTAAL  DDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKL
Sbjct: 1119 IINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKL 1178

Query: 388  DMEKIRDAELYVDANVVKQAILLTPKLKLKHEHINVLDDRKLRVLPQDGDRSKLHFNLHF 447
            DMEKIRDAELYVDANVVKQAIL+TPKLKLKHEHINVLDDRKLRVLPQD DR+KLHFNLHF
Sbjct: 1179 DMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDADRNKLHFNLHF 1238

Query: 448  LKNMLPAVVVKGIKTVGRAVIKEEKDKVRNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN 507
            LKNMLP VVVKGIKTVGRAVIKEEKDK RNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN
Sbjct: 1239 LKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN 1298

Query: 508  HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 567
            HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ
Sbjct: 1299 HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 1358

Query: 568  KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP 627
            KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQR SVP
Sbjct: 1359 KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRVSVP 1400

Query: 628  QHLPYGPVAILS 639
            Q LPYGP AILS
Sbjct: 1419 QQLPYGPPAILS 1400

[Close]

BLAST of Spg027564 vs. ExPASy Swiss-Prot
Match: F4JXF9 (DNA-directed RNA polymerase III subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRPC1 PE=2 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 2.8e-173
Identity = 351/645 (54.42%), Postives = 428/645 (66.36%), Query Frame = 0


Query: 9    RMVVDRGERTVVGSAS-----------FPTKEESPTMLAKGFVANSFYSGLTATEFFFHT 68
            +MV   G++TV G  +           FP   +SP   AKGFVANSFYSGLTATEFFFHT
Sbjct: 795  QMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPA--AKGFVANSFYSGLTATEFFFHT 854

Query: 69   MGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYGDDGMDPAQ 128
            MGGREGLVDTAVKTA TGYMSRRL+KALEDL +HYD++VRNA GCI+QF YGDDGMDPA 
Sbjct: 855  MGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTYGDDGMDPAL 914

Query: 129  MEGKSGAPLNFERLFLKAKVWNHISDVLFPQSAYIFDINILKVSFEFIQATC-PIDGNKI 188
            MEGK GAPLNF RLFLK                              +QATC P   +  
Sbjct: 915  MEGKDGAPLNFNRLFLK------------------------------VQATCPPRSHHTY 974

Query: 189  LSPSEFSETVEDRLLKDDATPECGCSPAFIGSLKIFLNKYIEAQKKSWGTLLDNESDVGK 248
            LS  E S+  E+ L++ D +    C+ AF+ SL+ F+                  S +G 
Sbjct: 975  LSSEELSQKFEEELVRHDKSRV--CTDAFVKSLREFV------------------SLLGV 1034

Query: 249  KTIGSSENDDTVIRNKVLQNIAGVTQRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIG 308
            K+    +         VL   +GVT +QL+VF+  C+ RY  KKIEAGTAIG IGAQSIG
Sbjct: 1035 KSASPPQ---------VLYKASGVTDKQLEVFVKICVFRYREKKIEAGTAIGTIGAQSIG 1094

Query: 309  EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALKQDDNVNIARMVK 368
            EPGTQMTLKTFHFAGVASMN+T GVPRI EIIN +K ISTP+++A L+    +  AR VK
Sbjct: 1095 EPGTQMTLKTFHFAGVASMNITQGVPRINEIINASKNISTPVISAELENPLELTSARWVK 1154

Query: 369  ARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILLTPKLKLK 428
             RIEKT LGQ+A+ I+++M+S SA + I LD + I +A L +    VK +IL TP++KL 
Sbjct: 1155 GRIEKTTLGQVAESIEVLMTSTSASVRIILDNKIIEEACLSITPWSVKNSILKTPRIKLN 1214

Query: 429  HEHINVLDDRKLRVLPQDGDRSKLHFNLHFLKNMLPAVVVKGIKTVGRAVIKEEKDK--- 488
               I VL D  L + P   D+S+ HFNLH LKN+LP ++V GIKTV R V+ E+ DK   
Sbjct: 1215 DNDIRVL-DTGLDITPV-VDKSRAHFNLHNLKNVLPNIIVNGIKTVERVVVAEDMDKSKQ 1274

Query: 489  VRNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTME 548
            +    K+ L VEGT L AVMGT G++G  T SN+++EV + LGIEAAR  II+EI   M 
Sbjct: 1275 IDGKTKWKLFVEGTNLLAVMGTPGINGRTTTSNNVVEVSKTLGIEAARTTIIDEIGTVMG 1334

Query: 549  SHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGR 608
            +HGMSIDIRHMMLL D+MT+RGEVLGI R GIQKMDKSVLM ASFE+T DHLF+A+ +G+
Sbjct: 1335 NHGMSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQASFERTGDHLFSAAASGK 1376

Query: 609  DDKIEGVSECVIMGIPMPLGTGMLKVRQRASVPQHLPYGPVAILS 639
             D IEGV+ECVIMGIPM LGTG+LKV QR      L YGP  I+S
Sbjct: 1395 VDNIEGVTECVIMGIPMKLGTGILKVLQRTDDLPKLKYGPDPIIS 1376

[Close]

BLAST of Spg027564 vs. ExPASy Swiss-Prot
Match: O14802 (DNA-directed RNA polymerase III subunit RPC1 OS=Homo sapiens OX=9606 GN=POLR3A PE=1 SV=2)

HSP 1 Score: 521.9 bits (1343), Expect = 9.9e-147
Identity = 307/635 (48.35%), Postives = 402/635 (63.31%), Query Frame = 0


Query: 9    RMVVDRGERTVVGS--------ASFPTKEE-SPTMLAKGFVANSFYSGLTATEFFFHTMG 68
            +M+   G++ + GS         S P  E+ S    AKGFVANSFYSGLT TEFFFHTM 
Sbjct: 794  QMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYSGLTPTEFFFHTMA 853

Query: 69   GREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYGDDGMDPAQME 128
            GREGLVDTAVKTA+TGYM RRL+K+LEDL   YD +VR++ G I+QF YG DG+DPA ME
Sbjct: 854  GREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQFIYGGDGLDPAAME 913

Query: 129  GKSGAPLNFERLFLKAKVWNHISDVLFPQSAYIFDINILKVSFEFIQATCPIDGNKILSP 188
            GK   PL F+R+                               + I+A  P      LS 
Sbjct: 914  GKD-EPLEFKRV------------------------------LDNIKAVFPCPSEPALSK 973

Query: 189  SEFSETVEDRLLKDDATPECGCSPAFIGSLKIFLNKYIEAQKKSWGTLLDNESDVGKKTI 248
            +E   T E  + K +    C C  +F+  +K F+    E  KK+            +   
Sbjct: 974  NELILTTESIMKKSEFL--C-CQDSFLQEIKKFIKGVSEKIKKT------------RDKY 1033

Query: 249  GSSENDDTVIRNKVLQNIAGVTQRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPG 308
            G ++N  T    +VL  +  +T  Q++ FL+TC  +Y   ++E G+A+GA+ AQSIGEPG
Sbjct: 1034 GINDNGTT--EPRVLYQLDRITPTQVEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPG 1093

Query: 309  TQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALKQDDNVNIARMVKARI 368
            TQMTLKTFHFAGVASMN+TLGVPRIKEIIN +K ISTPI+TA L +DD+ + AR+VK RI
Sbjct: 1094 TQMTLKTFHFAGVASMNITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRI 1153

Query: 369  EKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILLTPKLKLKHEH 428
            EKT LG+I++ I+ V       I +KL +E+IR   L V+A  V+ +I  T KL++K   
Sbjct: 1154 EKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEVNAETVRYSI-CTSKLRVKPGD 1213

Query: 429  INVLDDRKLRVLPQDGDRSKLHFNLHFLKNMLPAVVVKGIKTVGRAVIKEEKDKVRNAKK 488
            + V  +  + V P++  +S +++ L FLK  LP VVV+GI  V RAVI    D+    +K
Sbjct: 1214 VAVHGEAVVCVTPRENSKSSMYYVLQFLKEDLPKVVVQGIPEVSRAVI--HIDEQSGKEK 1273

Query: 489  FSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSI 548
            + LLVEG  L+AVM T GV G  T SN+  EV++ LGIEAAR  II EI+YTM +HGMSI
Sbjct: 1274 YKLLVEGDNLRAVMATHGVKGTRTTSNNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSI 1333

Query: 549  DIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEG 608
            D RH+MLL DLMT++GEVLGITRFG+ KM +SVLMLASFEKTADHLF+A+  G+ D + G
Sbjct: 1334 DRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLASFEKTADHLFDAAYFGQKDSVCG 1377

Query: 609  VSECVIMGIPMPLGTGMLKVRQRASVPQHLPYGPV 635
            VSEC+IMGIPM +GTG+ K+  +A    + P  P+
Sbjct: 1394 VSECIIMGIPMNIGTGLFKLLHKADRDPNPPKRPL 1377

[Close]

BLAST of Spg027564 vs. ExPASy Swiss-Prot
Match: A4IF62 (DNA-directed RNA polymerase III subunit RPC1 OS=Bos taurus OX=9913 GN=POLR3A PE=2 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 2.2e-146
Identity = 305/635 (48.03%), Postives = 405/635 (63.78%), Query Frame = 0


Query: 9    RMVVDRGERTVVGS--------ASFPTKEE-SPTMLAKGFVANSFYSGLTATEFFFHTMG 68
            +M+   G++ + GS         S P  E+ S    AKGFVANSFYSGLT TEFFFHTM 
Sbjct: 794  QMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYSGLTPTEFFFHTMA 853

Query: 69   GREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYGDDGMDPAQME 128
            GREGLVDTAVKTA+TGYM RRL+K+LEDL   YD +VR++ G I+QF YG DG+DPA ME
Sbjct: 854  GREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQFIYGGDGLDPAAME 913

Query: 129  GKSGAPLNFERLFLKAKVWNHISDVLFPQSAYIFDINILKVSFEFIQATCPIDGNKILSP 188
            GK   PL F+R+                               + I+A  P      LS 
Sbjct: 914  GKD-EPLEFKRV------------------------------LDNIKAVFPCRSEPALSK 973

Query: 189  SEFSETVEDRLLKDDATPECGCSPAFIGSLKIFLNKYIEAQKKSWGTLLDNESDVGKKTI 248
            +E   + E  + K++    C C  +F+  +K F+ +  E  KK+            +   
Sbjct: 974  NELLLSAESIMKKNEFL--C-CQDSFLQEIKKFIKEVSEKIKKT------------RDKY 1033

Query: 249  GSSENDDTVIRNKVLQNIAGVTQRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPG 308
            G ++N  T    +VL  +  +T  Q++ FL+TC  +Y   ++E G+A+GA+ AQSIGEPG
Sbjct: 1034 GINDNGTT--EPRVLYQLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPG 1093

Query: 309  TQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALKQDDNVNIARMVKARI 368
            TQMTLKTFHFAGVASMN+TLGVPRIKEIIN +K ISTPI+TA L +DD+ + AR+VK RI
Sbjct: 1094 TQMTLKTFHFAGVASMNITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRI 1153

Query: 369  EKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILLTPKLKLKHEH 428
            EKT LG+I++ I+ V       I +KL +E+IR   L V+A  V+ +I ++ KL++K   
Sbjct: 1154 EKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEVNAETVRYSICMS-KLRVKPGD 1213

Query: 429  INVLDDRKLRVLPQDGDRSKLHFNLHFLKNMLPAVVVKGIKTVGRAVIKEEKDKVRNAKK 488
            + V  +  + V P++  +S +++ L FLK  LP VVV+GI  V RAVI    D+    +K
Sbjct: 1214 VAVHGEAVVCVTPRENSKSSMYYVLQFLKEDLPKVVVQGIPEVSRAVI--HIDEQSGKEK 1273

Query: 489  FSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSI 548
            + LLVEG  L+AVM T GV G  T SN+  EV++ LGIEAAR  II EI+YTM +HGMSI
Sbjct: 1274 YKLLVEGDNLRAVMATHGVKGTRTTSNNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSI 1333

Query: 549  DIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEG 608
            D RH+MLL DLMT++GEVLGITRFG+ KM +SVLMLASFEKTADHLF+A+  G+ D + G
Sbjct: 1334 DRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLASFEKTADHLFDAAYFGQKDSVCG 1377

Query: 609  VSECVIMGIPMPLGTGMLKVRQRASVPQHLPYGPV 635
            VSEC+IMGIPM +GTG+ K+  +A+     P  P+
Sbjct: 1394 VSECIIMGIPMNIGTGLFKLLHKANRDPSPPRRPL 1377

[Close]

BLAST of Spg027564 vs. ExPASy Swiss-Prot
Match: Q86AQ5 (DNA-directed RNA polymerase III subunit rpc1 OS=Dictyostelium discoideum OX=44689 GN=polr3a PE=3 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 1.1e-145
Identity = 301/630 (47.78%), Postives = 399/630 (63.33%), Query Frame = 0


Query: 36   AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSS 95
            +KGFV+NSFY+G+  TEFFFHTMGGREGLVDTAVKTA+TGYM RRL+KALEDLS HYD +
Sbjct: 818  SKGFVSNSFYTGMIPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLMKALEDLSTHYDYT 877

Query: 96   VRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAK------------------- 155
            VR++ G IVQF YGDDG+DPA ME K   P++F R  +  K                   
Sbjct: 878  VRDSIGGIVQFIYGDDGLDPAGMEAKD-RPVDFLRAMMSVKSTRQCRNEPEMKPFEIRKL 937

Query: 156  VWNHISDVLFPQSAYIFDINILKVSFE-------FIQATCPIDGNKILSPSEFSETVEDR 215
            V + I    F     +F  N ++V F        +IQ    +     LS  + ++  ++ 
Sbjct: 938  VESIIDSSKFEACTDLFK-NEIRVFFNGNEKTKGYIQELISLRKQFKLSSFDLNDNEDEI 997

Query: 216  LLKDDA------TPECGCSPAFIGSLKIF-LNKYIEAQKKSWGTLLDNESDVGKKTIGSS 275
            +++D++      T     +     ++KI  +   IE  + +       E+D  +K     
Sbjct: 998  IIEDNSPMDISTTTTTTTTTTTNNAVKITNITTDIEMNESN-----KEENDKIEKERIEK 1057

Query: 276  ENDDTVIR--------NKVLQNIAGVTQRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQS 335
            E +   ++          V+  I  +T+ Q+++FLD CL +Y   +IE GTA+GAIGAQS
Sbjct: 1058 EKESKRLKLLGERFANEHVVNQIHRITKTQIELFLDICLDKYSRARIEPGTAVGAIGAQS 1117

Query: 336  IGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALKQDDNVNIARM 395
            IGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK ISTPI+TA+L  D ++  AR+
Sbjct: 1118 IGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITASLNCDYDIRSARI 1177

Query: 396  VKARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILLTPKLK 455
            V  RIEKT LG +A  I+ V+      + IK+D   +   +L +++  + Q+I  T  LK
Sbjct: 1178 VAGRIEKTTLGHVATHIKEVVKRAGCYLSIKIDKNFVDSLQLEINSKTISQSIASTKGLK 1237

Query: 456  LKHEHINVLDDRKLRVLPQDGDRSKLHFNLHFLKNMLPAVVVKGIKTVGRAVIKEEKDKV 515
            LK E I    D KLR++P    R    + L FLKN LPAV+VKGI TV R VI +  +K 
Sbjct: 1238 LKPEQITTNGDYKLRIVPPANIREGSLYYLQFLKNNLPAVIVKGIPTVNRVVISKVDEK- 1297

Query: 516  RNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMES 575
               +++ LLVEG  L+AVM T G+ G +T SNHI+E +  LGIE AR  I+ EI   M S
Sbjct: 1298 --QERYQLLVEGYDLRAVMATPGIKGTHTTSNHIMECENTLGIETARNTIMSEIDMIMTS 1357

Query: 576  HGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRD 625
            HGMSIDIRH+MLL DLM+F+GE+LGITRFGI KM +SVLMLASFEKT DHLF+A+V+ R 
Sbjct: 1358 HGMSIDIRHVMLLADLMSFKGEILGITRFGIAKMKESVLMLASFEKTTDHLFDAAVHHRQ 1417

[Close]

BLAST of Spg027564 vs. ExPASy Swiss-Prot
Match: Q5ZL98 (DNA-directed RNA polymerase III subunit RPC1 OS=Gallus gallus OX=9031 GN=POLR3A PE=2 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 1.4e-145
Identity = 306/635 (48.19%), Postives = 402/635 (63.31%), Query Frame = 0


Query: 9    RMVVDRGERTVVGS--------ASFPTKEE-SPTMLAKGFVANSFYSGLTATEFFFHTMG 68
            +M+   G++ + GS         S P  E+ S    AKGFVANSFYSGLT TEFFFHTM 
Sbjct: 794  QMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYSGLTPTEFFFHTMA 853

Query: 69   GREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYGDDGMDPAQME 128
            GREGLVDTAVKTA+TGYM RRL+K+LEDL   YD +VR++ G I+QF YG DG+DPA ME
Sbjct: 854  GREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQFIYGGDGLDPAAME 913

Query: 129  GKSGAPLNFERLFLKAKVWNHISDVLFPQSAYIFDINILKVSFEFIQATCPIDGNKILSP 188
            GK   PL F+R+                               + I+A  P      LS 
Sbjct: 914  GKD-EPLEFKRV------------------------------LDNIRAVYPCRSEPALSK 973

Query: 189  SEFSETVEDRLLKDDATPECGCSPAFIGSLKIFLNKYIEAQKKSWGTLLDNESDVGKKTI 248
            +E   T E  + K++    C C  +F+  +K F+    E  KK+            +   
Sbjct: 974  NELVLTSESIMKKNEFL--C-CRDSFLQEIKKFIKGVSEKIKKT------------RDKY 1033

Query: 249  GSSENDDTVIRNKVLQNIAGVTQRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPG 308
            G ++N  T    +VL  +  +T  QL+ FL+TC  +Y   ++E G+A+GA+ AQSIGEPG
Sbjct: 1034 GINDNGTT--EPRVLYQLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPG 1093

Query: 309  TQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALKQDDNVNIARMVKARI 368
            TQMTLKTFHFAGVASMN+TLGVPRIKEIIN +K ISTPI+TA L +DD+ + AR+VK RI
Sbjct: 1094 TQMTLKTFHFAGVASMNITLGVPRIKEIINASKAISTPIITAQLDKDDDPDFARLVKGRI 1153

Query: 369  EKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILLTPKLKLKHEH 428
            EKT LG+I++ I+ V       I +KL +E+IR   L V+A  V+ +I ++ KL++K   
Sbjct: 1154 EKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEVNAETVRYSICIS-KLRVKPGD 1213

Query: 429  INVLDDRKLRVLPQDGDRSKLHFNLHFLKNMLPAVVVKGIKTVGRAVIKEEKDKVRNAKK 488
            + V  +  + V P++  +S +++ L  LK  LP VVV+GI  V RAVI    D+    +K
Sbjct: 1214 VAVHGEAVVCVTPRENSKSSMYYVLQSLKEELPKVVVQGIPEVSRAVI--HIDEQSGKEK 1273

Query: 489  FSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSI 548
            + LLVEG  L+AVM T GV G  T SN+  EV++ LGIEAAR  II EI+YTM +HGMSI
Sbjct: 1274 YKLLVEGDNLRAVMATHGVKGTKTSSNNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSI 1333

Query: 549  DIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEG 608
            D RH+MLL DLMT++GEVLGITRFG+ KM +SVLMLASFEKTADHLF+A+  G+ D + G
Sbjct: 1334 DRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLASFEKTADHLFDAAYFGQKDSVCG 1377

Query: 609  VSECVIMGIPMPLGTGMLKVRQRASVPQHLPYGPV 635
            VSEC+IMGIPM +GTG+ K+  +A      P  P+
Sbjct: 1394 VSECIIMGIPMNIGTGLFKLLHKADKESTPPRRPL 1377

[Close]

BLAST of Spg027564 vs. ExPASy TrEMBL
Match: A0A6J1I0L0 (DNA-directed RNA polymerase subunit OS=Cucurbita maxima OX=3661 GN=LOC111469417 PE=3 SV=1)

HSP 1 Score: 1063.5 bits (2749), Expect = 3.4e-307
Identity = 548/612 (89.54%), Postives = 562/612 (91.83%), Query Frame = 0


Query: 28   KEESPTMLAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 87
            + ++ T  AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED
Sbjct: 819  RRKAKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 878

Query: 88   LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKVWNHISDVLFP 147
            LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSG PLNFERLFLKAK           
Sbjct: 879  LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGTPLNFERLFLKAK----------- 938

Query: 148  QSAYIFDINILKVSFEFIQATCPIDGNKILSPSEFSETVEDRLLKDDATPECGCSPAFIG 207
                               ATCPIDGNKILSPSEFSETVEDRL K DA+PECGCSPAF+G
Sbjct: 939  -------------------ATCPIDGNKILSPSEFSETVEDRLSKSDASPECGCSPAFVG 998

Query: 208  SLKIFLNKYIEAQKKSWGTLL-DNESDVGKKTIGSSENDDTVIRNKVLQNIAGVTQRQLQ 267
            SLKIFLNKY+EAQKKSW TLL DNES+VGK  IGSSEND+ +IRNKV+QNIAGVT RQLQ
Sbjct: 999  SLKIFLNKYVEAQKKSWSTLLADNESNVGKSIIGSSENDNIMIRNKVVQNIAGVTHRQLQ 1058

Query: 268  VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 327
            VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE
Sbjct: 1059 VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 1118

Query: 328  IINGAKRISTPIVTAALKQDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKL 387
            IINGAK+ISTPIVTAALK +DNVNIARMVKARIEKTNLGQIAKCIQIVMS+RSALIEIKL
Sbjct: 1119 IINGAKKISTPIVTAALKHNDNVNIARMVKARIEKTNLGQIAKCIQIVMSTRSALIEIKL 1178

Query: 388  DMEKIRDAELYVDANVVKQAILLTPKLKLKHEHINVLDDRKLRVLPQDGDRSKLHFNLHF 447
            DMEKIRDAELYVDANVVKQAIL+TPKLKLKHEHINVLDDRKLRVLPQD DRSKLHFNLHF
Sbjct: 1179 DMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDTDRSKLHFNLHF 1238

Query: 448  LKNMLPAVVVKGIKTVGRAVIKEEKDKVRNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN 507
            LKNMLP VVVKGIKTVGRAVIKEEKDK RNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN
Sbjct: 1239 LKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN 1298

Query: 508  HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 567
            HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ
Sbjct: 1299 HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 1358

Query: 568  KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP 627
            KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP
Sbjct: 1359 KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP 1400

Query: 628  QHLPYGPVAILS 639
              LPYGP AILS
Sbjct: 1419 HQLPYGPPAILS 1400

[Close]

BLAST of Spg027564 vs. ExPASy TrEMBL
Match: A0A6J1HLT9 (DNA-directed RNA polymerase subunit OS=Cucurbita moschata OX=3662 GN=LOC111464789 PE=3 SV=1)

HSP 1 Score: 1063.5 bits (2749), Expect = 3.4e-307
Identity = 549/612 (89.71%), Postives = 561/612 (91.67%), Query Frame = 0


Query: 28   KEESPTMLAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 87
            + ++ T  AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED
Sbjct: 819  RRKAKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 878

Query: 88   LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKVWNHISDVLFP 147
            LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSG PLNFERLFLKAK           
Sbjct: 879  LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGTPLNFERLFLKAK----------- 938

Query: 148  QSAYIFDINILKVSFEFIQATCPIDGNKILSPSEFSETVEDRLLKDDATPECGCSPAFIG 207
                               ATCPIDGNKILSPSEFSETVEDRL K DATPE GCSPAF+G
Sbjct: 939  -------------------ATCPIDGNKILSPSEFSETVEDRLSKSDATPESGCSPAFVG 998

Query: 208  SLKIFLNKYIEAQKKSWGTLL-DNESDVGKKTIGSSENDDTVIRNKVLQNIAGVTQRQLQ 267
            SLKIFLNKY+EAQKKSW TLL DNESDVGK  IGSSEND+ +IRNKV+QNIAGVT RQLQ
Sbjct: 999  SLKIFLNKYVEAQKKSWSTLLADNESDVGKSVIGSSENDNIMIRNKVVQNIAGVTHRQLQ 1058

Query: 268  VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 327
            VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE
Sbjct: 1059 VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 1118

Query: 328  IINGAKRISTPIVTAALKQDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKL 387
            IINGAK+ISTPIVTAALK +DNVNIARMVKARIEKTNLGQIAKCIQIVMS+RSALIEIKL
Sbjct: 1119 IINGAKKISTPIVTAALKHNDNVNIARMVKARIEKTNLGQIAKCIQIVMSTRSALIEIKL 1178

Query: 388  DMEKIRDAELYVDANVVKQAILLTPKLKLKHEHINVLDDRKLRVLPQDGDRSKLHFNLHF 447
            DMEKIRDAELYVDANVVKQAIL+TPKLKLKHEHINVLDDRKLRVLPQD DRSKLHFNLHF
Sbjct: 1179 DMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDTDRSKLHFNLHF 1238

Query: 448  LKNMLPAVVVKGIKTVGRAVIKEEKDKVRNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN 507
            LKNMLP VVVKGIKTVGRAVIKEEKDK RNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN
Sbjct: 1239 LKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN 1298

Query: 508  HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 567
            HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ
Sbjct: 1299 HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 1358

Query: 568  KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP 627
            KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP
Sbjct: 1359 KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP 1400

Query: 628  QHLPYGPVAILS 639
              LPYGP AILS
Sbjct: 1419 HQLPYGPPAILS 1400

[Close]

BLAST of Spg027564 vs. ExPASy TrEMBL
Match: A0A6J1DR19 (DNA-directed RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111023541 PE=3 SV=1)

HSP 1 Score: 1058.5 bits (2736), Expect = 1.1e-305
Identity = 549/612 (89.71%), Postives = 560/612 (91.50%), Query Frame = 0


Query: 28  KEESPTMLAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 87
           + ++ T  AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED
Sbjct: 338 QRKAKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 397

Query: 88  LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKVWNHISDVLFP 147
           LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAK           
Sbjct: 398 LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAK----------- 457

Query: 148 QSAYIFDINILKVSFEFIQATCPIDGNKILSPSEFSETVEDRLLKDDATPECGCSPAFIG 207
                              ATCPIDGNKILSPSEFSETVEDRL K+DATPE GCS AFI 
Sbjct: 458 -------------------ATCPIDGNKILSPSEFSETVEDRLSKNDATPEGGCSVAFIE 517

Query: 208 SLKIFLNKYIEAQKKSWGTLL-DNESDVGKKTIGSSENDDTVIRNKVLQNIAGVTQRQLQ 267
           SLKIFLNKY+E QK++W  LL DNESD GK  IGSSEND+ VIR KV+QNIAGVT RQLQ
Sbjct: 518 SLKIFLNKYVETQKRAWSALLADNESDAGKTIIGSSENDNIVIRKKVVQNIAGVTHRQLQ 577

Query: 268 VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 327
           VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE
Sbjct: 578 VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 637

Query: 328 IINGAKRISTPIVTAALKQDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKL 387
           IINGAKRISTPIVTAALK DDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKL
Sbjct: 638 IINGAKRISTPIVTAALKHDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKL 697

Query: 388 DMEKIRDAELYVDANVVKQAILLTPKLKLKHEHINVLDDRKLRVLPQDGDRSKLHFNLHF 447
           DMEKIRDAELY+DANVVKQAILLTPKLKLKHEHINVLDDRKLRVLPQD DRSKLHFNLHF
Sbjct: 698 DMEKIRDAELYIDANVVKQAILLTPKLKLKHEHINVLDDRKLRVLPQDADRSKLHFNLHF 757

Query: 448 LKNMLPAVVVKGIKTVGRAVIKEEKDKVRNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN 507
           LKNMLP VVVKGIKTVGRAVIKEEKDKVRNAKKFSLLVEGTGLQAVMGTEGVDGC+TKSN
Sbjct: 758 LKNMLPIVVVKGIKTVGRAVIKEEKDKVRNAKKFSLLVEGTGLQAVMGTEGVDGCSTKSN 817

Query: 508 HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 567
           HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ
Sbjct: 818 HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 877

Query: 568 KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP 627
           KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP
Sbjct: 878 KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP 919

Query: 628 QHLPYGPVAILS 639
           QHLPYGP AILS
Sbjct: 938 QHLPYGPDAILS 919

[Close]

BLAST of Spg027564 vs. ExPASy TrEMBL
Match: A0A1S3CNX9 (DNA-directed RNA polymerase subunit OS=Cucumis melo OX=3656 GN=LOC103502942 PE=3 SV=1)

HSP 1 Score: 1054.7 bits (2726), Expect = 1.6e-304
Identity = 546/612 (89.22%), Postives = 558/612 (91.18%), Query Frame = 0


Query: 28   KEESPTMLAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 87
            + ++ T  AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED
Sbjct: 819  RRKAKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 878

Query: 88   LSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKVWNHISDVLFP 147
            LSI+YDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAK           
Sbjct: 879  LSIYYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAK----------- 938

Query: 148  QSAYIFDINILKVSFEFIQATCPIDGNKILSPSEFSETVEDRLLKDDATPECGCSPAFIG 207
                               ATCP DGNKILSPSEFSETVEDRL KDDA+PECGCSPAFIG
Sbjct: 939  -------------------ATCPSDGNKILSPSEFSETVEDRLSKDDASPECGCSPAFIG 998

Query: 208  SLKIFLNKYIEAQKKSWGTLL-DNESDVGKKTIGSSENDDTVIRNKVLQNIAGVTQRQLQ 267
            SLKIFLNKYIEAQKKSW TLL DNE+ V K  I SS+ND+ VIRN V+QNIAGVT RQLQ
Sbjct: 999  SLKIFLNKYIEAQKKSWSTLLADNETAVDKSIISSSDNDNIVIRNNVVQNIAGVTHRQLQ 1058

Query: 268  VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 327
            VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE
Sbjct: 1059 VFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 1118

Query: 328  IINGAKRISTPIVTAALKQDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKL 387
            IINGAKRISTPIVTAAL  DDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKL
Sbjct: 1119 IINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKL 1178

Query: 388  DMEKIRDAELYVDANVVKQAILLTPKLKLKHEHINVLDDRKLRVLPQDGDRSKLHFNLHF 447
            DMEKIRDAELYVDANVVKQAIL+TPKLKLKHEHINVLDDRKLRVLPQD DR+KLHFNLHF
Sbjct: 1179 DMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDADRNKLHFNLHF 1238

Query: 448  LKNMLPAVVVKGIKTVGRAVIKEEKDKVRNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN 507
            LKNMLP VVVKGIKTVGRAVIKEEKDK RNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN
Sbjct: 1239 LKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSN 1298

Query: 508  HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 567
            HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ
Sbjct: 1299 HIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQ 1358

Query: 568  KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVP 627
            KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQR SVP
Sbjct: 1359 KMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRVSVP 1400

Query: 628  QHLPYGPVAILS 639
            + LPYGP AILS
Sbjct: 1419 RQLPYGPPAILS 1400

[Close]

BLAST of Spg027564 vs. ExPASy TrEMBL
Match: A0A660KT31 (DNA-directed RNA polymerase III subunit RPC1 OS=Carpinus fangiana OX=176857 GN=FH972_011405 PE=3 SV=1)

HSP 1 Score: 829.7 bits (2142), Expect = 8.2e-237
Identity = 426/614 (69.38%), Postives = 496/614 (80.78%), Query Frame = 0


Query: 25   FPTKEESPTMLAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKA 84
            FP K ++P   AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KA
Sbjct: 512  FPRKAKTPA--AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKA 571

Query: 85   LEDLSIHYDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKVWNHISDV 144
            LEDLSIHYD++VRNA GC+VQF YGDDGMDPA MEGKSGAPLNF+RLFLKAK        
Sbjct: 572  LEDLSIHYDNTVRNASGCVVQFRYGDDGMDPASMEGKSGAPLNFDRLFLKAK-------- 631

Query: 145  LFPQSAYIFDINILKVSFEFIQATCPIDGNKILSPSEFSETVEDRLLKDDATPECGCSPA 204
                                  ATCP  GN+ LSP E SE VE RLL+DD TPE GCS A
Sbjct: 632  ----------------------ATCPAGGNEYLSPFEVSERVESRLLEDDMTPEGGCSVA 691

Query: 205  FIGSLKIFLNKYIEAQKKSWGTLLDNESDVGKKTIGSSENDDTVIRNKVLQNIAGVTQRQ 264
            F  S K FL++Y+++  K+       E+    + + + EN  + IR K+++NI+GVT +Q
Sbjct: 692  FKNSFKSFLDEYVKSLTKT------REAFESVENLAAKEN--SAIREKIVKNISGVTPKQ 751

Query: 265  LQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 324
            L+VFL+TC+SRYH K+IEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN+TLGVPRI
Sbjct: 752  LEVFLNTCISRYHLKQIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRI 811

Query: 325  KEIINGAKRISTPIVTAALKQDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEI 384
            KEIING K ISTPI+TAALK D+NVN ARMV+ RIEKTNLGQ+AK I++VM+SR A + +
Sbjct: 812  KEIINGNKNISTPIITAALKHDNNVNTARMVRGRIEKTNLGQVAKSIKLVMTSRLASLVV 871

Query: 385  KLDMEKIRDAELYVDANVVKQAILLTPKLKLKHEHINVLDDRKLRVLPQDGDRSKLHFNL 444
             LDME+IRD +L +DAN+VK++I+ TPKLKLK EHI VLD  KL +L  D DRSK+HF L
Sbjct: 872  TLDMERIRDVQLCIDANIVKESIIQTPKLKLKQEHIKVLDVGKLEILSPDTDRSKIHFQL 931

Query: 445  HFLKNMLPAVVVKGIKTVGRAVIKEEKDKVRNAKKFSLLVEGTGLQAVMGTEGVDGCNTK 504
            H LKN+LP V+VKGIKTV RA+IK+E++K     K+SLLVEGTGL+ VMGTEG+DG  T 
Sbjct: 932  HSLKNLLPTVIVKGIKTVERAIIKKEENKKTKTSKYSLLVEGTGLKEVMGTEGIDGRKTT 991

Query: 505  SNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFG 564
            SNH++EV Q LGIEAARKCIIEEIKYTMESHGMSIDIRHMMLL DLMTFRG+VLGITRFG
Sbjct: 992  SNHVLEVHQTLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLADLMTFRGDVLGITRFG 1051

Query: 565  IQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRAS 624
            IQKM KS+LMLASFEKT+DHLF+ASVNGRDD+IEGV+EC+IMGIPMP+GTGMLKV+QR +
Sbjct: 1052 IQKMGKSILMLASFEKTSDHLFSASVNGRDDRIEGVTECIIMGIPMPIGTGMLKVKQRDT 1085

Query: 625  VPQHLPYGPVAILS 639
            +P  L Y P AILS
Sbjct: 1112 LPSKLDYRPNAILS 1085

[Close]

BLAST of Spg027564 vs. TAIR 10
Match: AT5G60040.1 (nuclear RNA polymerase C1 )

HSP 1 Score: 610.1 bits (1572), Expect = 2.0e-174
Identity = 351/645 (54.42%), Postives = 428/645 (66.36%), Query Frame = 0


Query: 9    RMVVDRGERTVVGSAS-----------FPTKEESPTMLAKGFVANSFYSGLTATEFFFHT 68
            +MV   G++TV G  +           FP   +SP   AKGFVANSFYSGLTATEFFFHT
Sbjct: 795  QMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPA--AKGFVANSFYSGLTATEFFFHT 854

Query: 69   MGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYGDDGMDPAQ 128
            MGGREGLVDTAVKTA TGYMSRRL+KALEDL +HYD++VRNA GCI+QF YGDDGMDPA 
Sbjct: 855  MGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTYGDDGMDPAL 914

Query: 129  MEGKSGAPLNFERLFLKAKVWNHISDVLFPQSAYIFDINILKVSFEFIQATC-PIDGNKI 188
            MEGK GAPLNF RLFLK                              +QATC P   +  
Sbjct: 915  MEGKDGAPLNFNRLFLK------------------------------VQATCPPRSHHTY 974

Query: 189  LSPSEFSETVEDRLLKDDATPECGCSPAFIGSLKIFLNKYIEAQKKSWGTLLDNESDVGK 248
            LS  E S+  E+ L++ D +    C+ AF+ SL+ F+                  S +G 
Sbjct: 975  LSSEELSQKFEEELVRHDKSRV--CTDAFVKSLREFV------------------SLLGV 1034

Query: 249  KTIGSSENDDTVIRNKVLQNIAGVTQRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIG 308
            K+    +         VL   +GVT +QL+VF+  C+ RY  KKIEAGTAIG IGAQSIG
Sbjct: 1035 KSASPPQ---------VLYKASGVTDKQLEVFVKICVFRYREKKIEAGTAIGTIGAQSIG 1094

Query: 309  EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALKQDDNVNIARMVK 368
            EPGTQMTLKTFHFAGVASMN+T GVPRI EIIN +K ISTP+++A L+    +  AR VK
Sbjct: 1095 EPGTQMTLKTFHFAGVASMNITQGVPRINEIINASKNISTPVISAELENPLELTSARWVK 1154

Query: 369  ARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILLTPKLKLK 428
             RIEKT LGQ+A+ I+++M+S SA + I LD + I +A L +    VK +IL TP++KL 
Sbjct: 1155 GRIEKTTLGQVAESIEVLMTSTSASVRIILDNKIIEEACLSITPWSVKNSILKTPRIKLN 1214

Query: 429  HEHINVLDDRKLRVLPQDGDRSKLHFNLHFLKNMLPAVVVKGIKTVGRAVIKEEKDK--- 488
               I VL D  L + P   D+S+ HFNLH LKN+LP ++V GIKTV R V+ E+ DK   
Sbjct: 1215 DNDIRVL-DTGLDITPV-VDKSRAHFNLHNLKNVLPNIIVNGIKTVERVVVAEDMDKSKQ 1274

Query: 489  VRNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTME 548
            +    K+ L VEGT L AVMGT G++G  T SN+++EV + LGIEAAR  II+EI   M 
Sbjct: 1275 IDGKTKWKLFVEGTNLLAVMGTPGINGRTTTSNNVVEVSKTLGIEAARTTIIDEIGTVMG 1334

Query: 549  SHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGR 608
            +HGMSIDIRHMMLL D+MT+RGEVLGI R GIQKMDKSVLM ASFE+T DHLF+A+ +G+
Sbjct: 1335 NHGMSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQASFERTGDHLFSAAASGK 1376

Query: 609  DDKIEGVSECVIMGIPMPLGTGMLKVRQRASVPQHLPYGPVAILS 639
             D IEGV+ECVIMGIPM LGTG+LKV QR      L YGP  I+S
Sbjct: 1395 VDNIEGVTECVIMGIPMKLGTGILKVLQRTDDLPKLKYGPDPIIS 1376

[Close]

BLAST of Spg027564 vs. TAIR 10
Match: AT5G60040.2 (nuclear RNA polymerase C1 )

HSP 1 Score: 595.1 bits (1533), Expect = 6.6e-170
Identity = 347/647 (53.63%), Postives = 425/647 (65.69%), Query Frame = 0


Query: 9    RMVVDRGERTVVGSAS-----------FPTKEESPTMLAKGFVANSFYSGLTATEFFFHT 68
            +MV   G++TV G  +           FP   +SP   AKGFVANSFYSGLTATEFFFHT
Sbjct: 812  QMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPA--AKGFVANSFYSGLTATEFFFHT 871

Query: 69   MGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYGDDGMDPAQ 128
            MGGREGLVDTAVKTA TGYMSRRL+KALEDL +HYD++VRNA GCI+QF YGDDGMDPA 
Sbjct: 872  MGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQFTYGDDGMDPAL 931

Query: 129  MEGKSGAPLNFERLFLKAKVWNHISDVLFPQSAYIFDINILKVSFEFIQATC-PIDGNKI 188
            MEGK GAPLNF RLFLK                              +QATC P   +  
Sbjct: 932  MEGKDGAPLNFNRLFLK------------------------------VQATCPPRSHHTY 991

Query: 189  LSPSEFSETVEDRLLKDDATPECGCSPAFIGSLKIFLNKYIEAQKKSWGTLLDNESDVGK 248
            LS  E S+  E+ L++ D +    C+ AF+ SL+ F+                  S +G 
Sbjct: 992  LSSEELSQKFEEELVRHDKSRV--CTDAFVKSLREFV------------------SLLGV 1051

Query: 249  KTIGSSENDDTVIRNKVLQNIAGVTQRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIG 308
            K+    +         VL   +GVT +QL+VF+  C+ RY  KKIEAGTAIG IGAQSIG
Sbjct: 1052 KSASPPQ---------VLYKASGVTDKQLEVFVKICVFRYREKKIEAGTAIGTIGAQSIG 1111

Query: 309  EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALKQDDNVNIARMVK 368
            EPGTQMTLKTFHFAGVASMN+T GVPRI EIIN +K ISTP+++A L+    +  AR VK
Sbjct: 1112 EPGTQMTLKTFHFAGVASMNITQGVPRINEIINASKNISTPVISAELENPLELTSARWVK 1171

Query: 369  ARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILLTPKLKLK 428
             RIEKT LGQ+A+ I+++M+S SA + I LD + I +A L +    VK +IL TP++KL 
Sbjct: 1172 GRIEKTTLGQVAESIEVLMTSTSASVRIILDNKIIEEACLSITPWSVKNSILKTPRIKLN 1231

Query: 429  HEHINVLDDRKLRVLPQDGDRSKLHFNLHFLKNMLPAVVVKGIKTVGRAVIKEEKDKVRN 488
               I VL D  L + P   D+S+ HFNLH LKN+LP ++V GIKTV R V+ E+ DK+  
Sbjct: 1232 DNDIRVL-DTGLDITPV-VDKSRAHFNLHNLKNVLPNIIVNGIKTVERVVVAEDMDKM-- 1291

Query: 489  AKKFSLLV-----EGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYT 548
                 L++       T L AVMGT G++G  T SN+++EV + LGIEAAR  II+EI   
Sbjct: 1292 --LAKLIIPCPRWACTNLLAVMGTPGINGRTTTSNNVVEVSKTLGIEAARTTIIDEIGTV 1351

Query: 549  MESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVN 608
            M +HGMSIDIRHMMLL D+MT+RGEVLGI R GIQKMDKSVLM ASFE+T DHLF+A+ +
Sbjct: 1352 MGNHGMSIDIRHMMLLADVMTYRGEVLGIQRTGIQKMDKSVLMQASFERTGDHLFSAAAS 1391

Query: 609  GRDDKIEGVSECVIMGIPMPLGTGMLKVRQRASVPQHLPYGPVAILS 639
            G+ D IEGV+ECVIMGIPM LGTG+LKV QR      L YGP  I+S
Sbjct: 1412 GKVDNIEGVTECVIMGIPMKLGTGILKVLQRTDDLPKLKYGPDPIIS 1391

[Close]

BLAST of Spg027564 vs. TAIR 10
Match: AT4G35800.1 (RNA polymerase II large subunit )

HSP 1 Score: 288.5 bits (737), Expect = 1.3e-77
Identity = 219/679 (32.25%), Postives = 334/679 (49.19%), Query Frame = 0


Query: 36   AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSS 95
            ++GFV NS+  GLT  EFFFH MGGREGL+DTAVKT++TGY+ RRL+KA+ED+ + YD +
Sbjct: 815  SRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGT 874

Query: 96   VRNAGGCIVQFCYGDDGMDPAQMEGKSGAPL-----NFERLF---LKAKVWN-------H 155
            VRN+ G ++QF YG+DGMD   +E +    L      F+R F   +  + WN       H
Sbjct: 875  VRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKSEFDRTFKYEIDDENWNPTYLSDEH 934

Query: 156  ISDVL-FPQSAYIFDINILKVSFEFI---------------------------QATCPID 215
            + D+    +   +FD    K+  +                             Q T  ID
Sbjct: 935  LEDLKGIRELRDVFDAEYSKLETDRFQLGTEIATNGDSTWPLPVNIKRHIWNAQKTFKID 994

Query: 216  GNKI--LSPSEFSETV---EDRLL---KDDATPECGCSPAFIGSLKIFLNKYIEAQKKSW 275
              KI  + P E  + V   ++RLL    DDA                     +EAQK + 
Sbjct: 995  LRKISDMHPVEIVDAVDKLQERLLVVPGDDALS-------------------VEAQKNA- 1054

Query: 276  GTLLDNESDVGKKTIGSSENDDTVIRNKVLQNIAGVTQRQLQVFLDTCLSRYHTKKIEAG 335
             TL  N   + + T+ S          +VL+    +++   +  +    SR+    +  G
Sbjct: 1055 -TLFFN--ILLRSTLAS---------KRVLEEYK-LSREAFEWVIGEIESRFLQSLVAPG 1114

Query: 336  TAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALK 395
              IG + AQSIGEP TQMTL TFH+AGV++ NVTLGVPR++EIIN AKRI TP ++  L 
Sbjct: 1115 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLT 1174

Query: 396  QDDNVNI--ARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANV 455
             + + +   A+ V+  +E T L  + +  ++          I+ D E +R      D +V
Sbjct: 1175 PEASKSKEGAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDFEFVRSYYEMPDEDV 1234

Query: 456  -------------VKQAILLTPKLKLKH--EHINVLDDRKLRVLPQDGDRSKLHFNLH-- 515
                         + + +++  KL +    E IN+  D  L  +  D +  KL   +   
Sbjct: 1235 SPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAQKLILRIRIM 1294

Query: 516  ------------------FLK----NMLPAVVVKGIKTVGRAVIK-------EEKDKVRN 575
                              FLK    NML  + ++GI  + +  IK       +E+   + 
Sbjct: 1295 NDEGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQVRKSRFDEEGGFKT 1354

Query: 576  AKKFSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHG 616
            ++++ L  EG  L AVM  E VD   T SNH+IE+ +VLGIEA R+ +++E++  +   G
Sbjct: 1355 SEEWMLDTEGVNLLAVMCHEDVDPKRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1414

[Close]

BLAST of Spg027564 vs. TAIR 10
Match: AT3G57660.1 (nuclear RNA polymerase A1 )

HSP 1 Score: 162.9 bits (411), Expect = 8.3e-40
Identity = 176/769 (22.89%), Postives = 278/769 (36.15%), Query Frame = 0


Query: 36   AKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSS 95
            A GF+++ F SGL   E++FH M GREGLVDTAVKT+ +GY+ R L+K LE L ++YD +
Sbjct: 991  AGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVNYDCT 1050

Query: 96   VRNAGGCIVQFCYGDDGMD---PAQMEGKSGAPLNFERLFLKAKVWNHISDVLFPQSAYI 155
            VR+A G I+QF YG+DG+D    + +E      +N + +  K        D+L   S+YI
Sbjct: 1051 VRDADGSIIQFQYGEDGVDVHRSSFIEKFKELTINQDMVLQKCS-----EDMLSGASSYI 1110

Query: 156  FDINILKVSFEFIQATCPIDGNKILSPSEFSETVEDRLLKDDATPECGCSPAFIGSLKIF 215
             D+ I                                                  SLK  
Sbjct: 1111 SDLPI--------------------------------------------------SLKKG 1170

Query: 216  LNKYIEAQKKSWGTLLDNESDVGKKTIGSSENDDTVIRNKVLQNIAGVTQRQLQVFLDTC 275
              K++EA   +                               + IA    RQ +  L   
Sbjct: 1171 AEKFVEAMPMN-------------------------------ERIASKFVRQ-EELLKLV 1230

Query: 276  LSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEII-NGA 335
             S++     + G  +G + AQS+GEP TQMTL TFH AG   MNVTLG+PR++EI+   A
Sbjct: 1231 KSKFFASLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAA 1290

Query: 336  KRISTPIVTAALKQDDNVNIARMVKARIEKTNLGQIAKCIQIVM---------------- 395
              I TPI+T  L +      A  +  R+ K  +  I K +++ +                
Sbjct: 1291 ANIKTPIMTCPLLKGKTKEDANDITDRLRKITVADIIKSMELSVVPYTVYENEVCSIHKL 1350

Query: 396  ------------------------------------------------------------ 455
                                                                        
Sbjct: 1351 KINLYKPEHYPKHTDITEEDWEETMRAVFLRKLEDAIETHMKMLHRIRGIHNDVTGPIAG 1410

Query: 456  ----------------------------------------------------------SS 515
                                                                      SS
Sbjct: 1411 NETDNDDSVSGKQNEDDGDDDGEGTEVDDLGSDAQKQKKQETDEMDYEENSEDETNEPSS 1470

Query: 516  RSALIEIKLDMEKIRDAELYVDANVVKQAILLTPKLKLK-------------HEHINVLD 575
             S + + ++D E   D E+  +     Q   + P+ ++K              + +    
Sbjct: 1471 ISGVEDPEMDSEN-EDTEVSKEDTPEPQEESMEPQKEVKGVKNVKEQSKKKRRKFVRAKS 1530

Query: 576  DRKLRVLPQDGDRSKLHFNL-----HFL-----KNMLPAVVVKGIKTVGRAVI------- 626
            DR + V   +G++ ++HF       H L     +     V ++    + R  +       
Sbjct: 1531 DRHIFV-KGEGEKFEVHFKFATDDPHILLAQIAQQTAQKVYIQNSGKIERCTVANCGDPQ 1590

[Close]

BLAST of Spg027564 vs. TAIR 10
Match: ATCG00170.1 (DNA-directed RNA polymerase family protein )

HSP 1 Score: 65.1 bits (157), Expect = 2.4e-10
Identity = 67/276 (24.28%), Postives = 105/276 (38.04%), Query Frame = 0


Query: 40  VANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNA 99
           + ++   GL+ TE+     G R+G+VDTAV+T+D GY++RRL++ ++ + +         
Sbjct: 165 IQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVR-------- 224

Query: 100 GGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKVWNHISDVLFPQSAYIFDINILK 159
                         D   + G S +P N                                
Sbjct: 225 ------------RTDCGTIRGISVSPRN-------------------------------- 284

Query: 160 VSFEFIQATCPIDGNKILSPSEFSETVEDRLLKDDATPECGCSPAFIGSLKIFLNKYIEA 219
                         N+++S   F +T+  R+L DD          +IGS      + +  
Sbjct: 285 -------------KNRMMSERIFIQTLIGRVLADD---------IYIGS------RCVAF 344

Query: 220 QKKSWGT-LLDNESDVGKKTIGSSENDDTVIRNKVLQNIAGVTQRQLQVFLDTCLSR--Y 279
           + +  G  L++     G ++I         IR          T R        C  R   
Sbjct: 345 RNQDLGIGLVNRLITFGTQSIS--------IRTP-------FTCRSTSWICRLCYGRSPT 345

Query: 280 HTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGV 313
           H   +E G A+G I  QSIGEPGTQ+TL+TFH  GV
Sbjct: 405 HGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGV 345

The following BLAST results are available for this feature:

BLAST of Spg027564 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023519826.1	1.4e-307	89.87	DNA-directed RNA polymerase III subunit 1 [Cucurbita pepo subsp. pepo]	[more]
KAG6583479.1	7.0e-307	89.71	DNA-directed RNA polymerase III subunit 1, partial [Cucurbita argyrosperma subsp...	[more]
XP_022964790.1	7.0e-307	89.71	DNA-directed RNA polymerase III subunit 1 [Cucurbita moschata]	[more]
XP_022970436.1	7.0e-307	89.54	DNA-directed RNA polymerase III subunit 1 [Cucurbita maxima]	[more]
XP_004148776.1	9.1e-307	89.71	DNA-directed RNA polymerase III subunit 1 isoform X1 [Cucumis sativus] >KAE86527...	[more]

BLAST of Spg027564 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JXF9	2.8e-173	54.42	DNA-directed RNA polymerase III subunit 1 OS=Arabidopsis thaliana OX=3702 GN=NRP...	[more]
O14802	9.9e-147	48.35	DNA-directed RNA polymerase III subunit RPC1 OS=Homo sapiens OX=9606 GN=POLR3A P...	[more]
A4IF62	2.2e-146	48.03	DNA-directed RNA polymerase III subunit RPC1 OS=Bos taurus OX=9913 GN=POLR3A PE=...	[more]
Q86AQ5	1.1e-145	47.78	DNA-directed RNA polymerase III subunit rpc1 OS=Dictyostelium discoideum OX=4468...	[more]
Q5ZL98	1.4e-145	48.19	DNA-directed RNA polymerase III subunit RPC1 OS=Gallus gallus OX=9031 GN=POLR3A ...	[more]

BLAST of Spg027564 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I0L0	3.4e-307	89.54	DNA-directed RNA polymerase subunit OS=Cucurbita maxima OX=3661 GN=LOC111469417 ...	[more]
A0A6J1HLT9	3.4e-307	89.71	DNA-directed RNA polymerase subunit OS=Cucurbita moschata OX=3662 GN=LOC11146478...	[more]
A0A6J1DR19	1.1e-305	89.71	DNA-directed RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111023541 PE=3 ...	[more]
A0A1S3CNX9	1.6e-304	89.22	DNA-directed RNA polymerase subunit OS=Cucumis melo OX=3656 GN=LOC103502942 PE=3...	[more]
A0A660KT31	8.2e-237	69.38	DNA-directed RNA polymerase III subunit RPC1 OS=Carpinus fangiana OX=176857 GN=F...	[more]

BLAST of Spg027564 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60040.1	2.0e-174	54.42	nuclear RNA polymerase C1	[more]
AT5G60040.2	6.6e-170	53.63	nuclear RNA polymerase C1	[more]
AT4G35800.1	1.3e-77	32.25	RNA polymerase II large subunit	[more]
AT3G57660.1	8.3e-40	22.89	nuclear RNA polymerase A1	[more]
ATCG00170.1	2.4e-10	24.28	DNA-directed RNA polymerase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.150.390		coord: 570..628 e-value: 1.6E-20 score: 74.3
None	No IPR available	GENE3D	6.20.50.80		coord: 86..139 e-value: 5.5E-18 score: 66.2
None	No IPR available	GENE3D	6.10.250.2940		coord: 25..85 e-value: 6.7E-28 score: 97.9
None	No IPR available	PANTHER	PTHR19376	DNA-DIRECTED RNA POLYMERASE	coord: 24..623
None	No IPR available	PANTHER	PTHR19376:SF32	DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1	coord: 24..623
None	No IPR available	SUPERFAMILY	64484	beta and beta-prime subunits of DNA dependent RNA-polymerase	coord: 31..621
IPR007081	RNA polymerase Rpb1, domain 5	PFAM	PF04998	RNA_pol_Rpb1_5	coord: 47..572 e-value: 1.1E-90 score: 303.7
IPR035698	DNA-directed RNA polymerase III subunit RPC1, C-terminal	CDD	cd02736	RNAP_III_Rpc1_C	coord: 275..616 e-value: 6.51065E-177 score: 502.133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg027564.1	Spg027564.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005666	RNA polymerase III complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0046872	metal ion binding